View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF15302_low_105 (Length: 237)
Name: NF15302_low_105
Description: NF15302
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15302_low_105 |
 | |
|
| [»] scaffold0376 (1 HSPs) |
| | |
|
| [»] scaffold0090 (1 HSPs) |
| | |
|
| [»] scaffold0131 (2 HSPs) |
| | |
|
| [»] scaffold0316 (1 HSPs) |
| | |
|
| [»] scaffold0073 (3 HSPs) |
| | |
|
| [»] scaffold0356 (1 HSPs) |
| | |
|
| [»] scaffold0276 (1 HSPs) |
| | |
|
| [»] scaffold0050 (1 HSPs) |
| | |
|
| [»] scaffold0029 (1 HSPs) |
| | |
|
| [»] scaffold0770 (1 HSPs) |
| | |
|
| [»] scaffold0118 (1 HSPs) |
| | |
|
| [»] scaffold0003 (2 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 173; Significance: 4e-93; HSPs: 9)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 30890849 - 30890629
Alignment:
| Q |
1 |
attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca |
100 |
Q |
| |
|
|||||| ||||||||||||||||||||| ||||||||||||||||||| |||| | ||||||||||||||||||||| |||||||||||||| |||||| |
|
|
| T |
30890849 |
attactgttgttttggtgttgccacatgtccctttcttttttacaaatactctcaccatattgatcctcacaaaatgttctcaccacaatcattctcaca |
30890750 |
T |
|
| Q |
101 |
tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctattaaaaattgaaataactaaaagggaatattctatagttttgtatac |
200 |
Q |
| |
|
|||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
30890749 |
tatttgtatttaatgttcttgtataaaaggaaattttacaatatcaaattctattaaaaattgaaatgactaaaagggaatattctatagttttgtatac |
30890650 |
T |
|
| Q |
201 |
actcttattcaaatatcaatt |
221 |
Q |
| |
|
| ||||||||||||||||||| |
|
|
| T |
30890649 |
attcttattcaaatatcaatt |
30890629 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 11972291 - 11972446
Alignment:
| Q |
1 |
attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca |
100 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
11972291 |
attactattgttttggtgttgccacatgtccctttcttttttacaaatgctctcaccatattgatcctcacaaaatgctctcaccacaatcatcctcaca |
11972390 |
T |
|
| Q |
101 |
tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta |
156 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11972391 |
tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta |
11972446 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 23149383 - 23149538
Alignment:
| Q |
1 |
attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca |
100 |
Q |
| |
|
|||| ||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||| ||||| |
|
|
| T |
23149383 |
attattattgttttggtgttgccacatgtccctttcttttttacaaatgctctcaccatattgatcctcacaaaatgctctcaccacaatcatcttcaca |
23149482 |
T |
|
| Q |
101 |
tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta |
156 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23149483 |
tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta |
23149538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 23155045 - 23155200
Alignment:
| Q |
1 |
attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca |
100 |
Q |
| |
|
|||| ||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||| ||||| |
|
|
| T |
23155045 |
attattattgttttggtgttgccacatgtccctttcttttttacaaatgctctcaccatattgatcctcacaaaatgctctcaccacaatcatcttcaca |
23155144 |
T |
|
| Q |
101 |
tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta |
156 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23155145 |
tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta |
23155200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 10197494 - 10197344
Alignment:
| Q |
1 |
attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca |
100 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||| |||| | |||||||||||||||||||||| ||||| ||| ||||||||| | |
|
|
| T |
10197494 |
attactattgttttggtgttgccacatgtccctttcttttttacaaatactctcaccatattgatcctcacaaaatgctctcacaacattcatcctcaaa |
10197395 |
T |
|
| Q |
101 |
tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattc |
151 |
Q |
| |
|
|||||||||||||| | ||| ||||||||||||||| ||| |||||||| |
|
|
| T |
10197394 |
aatttgtatttaatgcttatgaataaaaggaagtttttcaaattcaaattc |
10197344 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 38 - 151
Target Start/End: Original strand, 4212836 - 4212948
Alignment:
| Q |
38 |
tttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagtttt |
137 |
Q |
| |
|
||||||||||| |||| | || ||| ||||||||||| | | ||||||||| ||| ||||||| |||||||||||||| | ||| ||||||||||||||| |
|
|
| T |
4212836 |
tttttacaaatactctcaccacattcatcctcacaaa-tactctcaccacattcaacctcacaaatttgtatttaatgcttatgaataaaaggaagtttt |
4212934 |
T |
|
| Q |
138 |
acaatatcaaattc |
151 |
Q |
| |
|
||| |||||||| |
|
|
| T |
4212935 |
tcaaattcaaattc |
4212948 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 31185892 - 31185841
Alignment:
| Q |
1 |
attactattgttttggtgttgccacatg-cccctttcttttttacaaatgct |
51 |
Q |
| |
|
||||||||||||||||| |||||||||| ||||||||||||||||||||||| |
|
|
| T |
31185892 |
attactattgttttggtattgccacatgtcccctttcttttttacaaatgct |
31185841 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 137
Target Start/End: Original strand, 12577500 - 12577598
Alignment:
| Q |
38 |
tttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagtttt |
137 |
Q |
| |
|
||||||||||| |||| | || ||| ||||||||||| | | ||||||||| ||| ||| ||| |||||||||||||| | ||| ||||||||||||||| |
|
|
| T |
12577500 |
tttttacaaatactctcaccacattcatcctcacaaa-tactctcaccacattcaacctaacaaatttgtatttaatgcttatgaataaaaggaagtttt |
12577598 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 151
Target Start/End: Complemental strand, 24202528 - 24202457
Alignment:
| Q |
80 |
ctcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattc |
151 |
Q |
| |
|
||||||||| ||| ||||||| |||||||||||||| | ||| ||||||||||||||| ||| |||||||| |
|
|
| T |
24202528 |
ctcaccacattcaacctcacaaatttgtatttaatgcttatgaataaaaggaagtttttcaaattcaaattc |
24202457 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 140; Significance: 2e-73; HSPs: 13)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 37379988 - 37379833
Alignment:
| Q |
1 |
attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca |
100 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
37379988 |
attactattgttttggtgttgccacatgtccctttcttttttacaaatgctctcaccatattgatcctcacaaaatgctctcaccacaatcatcctcaca |
37379889 |
T |
|
| Q |
101 |
tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta |
156 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37379888 |
tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta |
37379833 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 2254417 - 2254572
Alignment:
| Q |
1 |
attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca |
100 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
2254417 |
attactattgttttggtgttgccacatgtccctttcttttttacaaatgctctcaccatattgatcctcacaaaatgctctcaccacaatcatcctcaca |
2254516 |
T |
|
| Q |
101 |
tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta |
156 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
2254517 |
tatttgtatttaatgttcatgtataaaatgaagttttacaatatcaaattctatta |
2254572 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 30322414 - 30322259
Alignment:
| Q |
1 |
attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca |
100 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||| |||| | |||||||||||||||||||||| ||||||||||||||||| ||| |
|
|
| T |
30322414 |
attactattgttttggtgttgccacatgtccctttcttttttacaaatactctcaccatattgatcctcacaaaatgctctcaccacaatcatccttaca |
30322315 |
T |
|
| Q |
101 |
tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta |
156 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30322314 |
tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta |
30322259 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 5 - 156
Target Start/End: Complemental strand, 27890318 - 27890167
Alignment:
| Q |
5 |
ctattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatt |
104 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||| ||||||||| ||||||||||||||||||||||||| |
|
|
| T |
27890318 |
ctattgttttggtgttgccacatatccctttcttttttacaaatgctctcaccatattgatcctaacaaaatgctctcaccacaatcatcctcacatatt |
27890219 |
T |
|
| Q |
105 |
tgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta |
156 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27890218 |
tgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta |
27890167 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 37266009 - 37265854
Alignment:
| Q |
1 |
attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca |
100 |
Q |
| |
|
||||||||| |||||||||||||||||| || ||||||||||||||||||||| | |||||||||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
37266009 |
attactattcttttggtgttgccacatgtccatttcttttttacaaatgctctcaccatattgatcctcacaaaatgctctcagcacaatcatcctcaca |
37265910 |
T |
|
| Q |
101 |
tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta |
156 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37265909 |
tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta |
37265854 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 8424688 - 8424842
Alignment:
| Q |
1 |
attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca |
100 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||| |||||||||||| | |||||||||||||||||||| | ||||||||||||||||||||| |
|
|
| T |
8424688 |
attactattgttttggtgttgccacatgtccctttctttt-tacaaatgctctcaccatattgatcctcacaaaatactctcaccacaatcatcctcaca |
8424786 |
T |
|
| Q |
101 |
tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta |
156 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
8424787 |
tatttgtatttaatgttcatgtataaaaggaacttttacaatatcaaattctatta |
8424842 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 38 - 137
Target Start/End: Complemental strand, 3700819 - 3700721
Alignment:
| Q |
38 |
tttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagtttt |
137 |
Q |
| |
|
||||||||||| |||| | || ||| ||||||||||| | | ||||||||| ||| ||||||| |||||||||||||| | ||| ||||||||||||||| |
|
|
| T |
3700819 |
tttttacaaatactctcaccacattcatcctcacaaa-tactctcaccacattcaacctcacaaatttgtatttaatgcttatgaataaaaggaagtttt |
3700721 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 38 - 137
Target Start/End: Original strand, 3868331 - 3868429
Alignment:
| Q |
38 |
tttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagtttt |
137 |
Q |
| |
|
||||||||||| |||| | || ||| ||||||||||| | | ||||||||| ||| ||||||| |||||||||||||| | ||| ||||||||||||||| |
|
|
| T |
3868331 |
tttttacaaatactctcaccacattcatcctcacaaa-tactctcaccacattcaacctcacaaatttgtatttaatgcttatgaataaaaggaagtttt |
3868429 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 137
Target Start/End: Complemental strand, 10031923 - 10031825
Alignment:
| Q |
38 |
tttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagtttt |
137 |
Q |
| |
|
||||||||||| |||| | || ||| ||||||||||| | | ||||| ||| ||| ||||||| |||||||||||||| | ||| ||||||||||||||| |
|
|
| T |
10031923 |
tttttacaaatactctcaccacattcatcctcacaaa-tactctcactacattcaacctcacaaatttgtatttaatgcttatgaataaaaggaagtttt |
10031825 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 137
Target Start/End: Original strand, 24622809 - 24622907
Alignment:
| Q |
38 |
tttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagtttt |
137 |
Q |
| |
|
||||||||||| |||| | || ||| ||||||||||| | | ||||||||| ||| ||||||| || ||||||||||| | ||| ||||||||||||||| |
|
|
| T |
24622809 |
tttttacaaatactctcaccacattcatcctcacaaa-tactctcaccacattcaacctcacaaatctgtatttaatgcttatgaataaaaggaagtttt |
24622907 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 119
Target Start/End: Complemental strand, 3696183 - 3696139
Alignment:
| Q |
75 |
atgcactcaccacaatcatcctcacatatttgtatttaatgttca |
119 |
Q |
| |
|
|||| ||||||| ||||||||||||| |||||||||||||||||| |
|
|
| T |
3696183 |
atgctctcaccataatcatcctcacaaatttgtatttaatgttca |
3696139 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 119
Target Start/End: Complemental strand, 3698545 - 3698501
Alignment:
| Q |
75 |
atgcactcaccacaatcatcctcacatatttgtatttaatgttca |
119 |
Q |
| |
|
|||| ||||||| ||||||||||||| |||||||||||||||||| |
|
|
| T |
3698545 |
atgctctcaccataatcatcctcacaaatttgtatttaatgttca |
3698501 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 119
Target Start/End: Original strand, 3870605 - 3870649
Alignment:
| Q |
75 |
atgcactcaccacaatcatcctcacatatttgtatttaatgttca |
119 |
Q |
| |
|
|||| ||||||| ||||||||||||| |||||||||||||||||| |
|
|
| T |
3870605 |
atgctctcaccataatcatcctcacaaatttgtatttaatgttca |
3870649 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 140; Significance: 2e-73; HSPs: 13)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 611041 - 611196
Alignment:
| Q |
1 |
attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca |
100 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
611041 |
attactattgttttggtgttgccacatgtccctttcttttttacaaatgctctcaccatattgatcctcacaaaatgctctcaccacaatcatcctcaca |
611140 |
T |
|
| Q |
101 |
tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta |
156 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
611141 |
tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta |
611196 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 6254138 - 6253983
Alignment:
| Q |
1 |
attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca |
100 |
Q |
| |
|
|||||||||||||||||||||||||||| | |||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||| ||||| |
|
|
| T |
6254138 |
attactattgttttggtgttgccacatgtcactttcttttttacaaatgctctcaccatattgatcctcacaaaatgctctcaccacaatcatcatcaca |
6254039 |
T |
|
| Q |
101 |
tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta |
156 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6254038 |
tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta |
6253983 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 35863994 - 35863839
Alignment:
| Q |
1 |
attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca |
100 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||| ||||||||||| | |||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
35863994 |
attactattgttttggtgttgccacatgtccctttctttttcacaaatgctctcaccatattgatcctcacaaaatgctctcaccacaatcatcctcaca |
35863895 |
T |
|
| Q |
101 |
tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta |
156 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
35863894 |
tatttgtatttaatgttcatgtataaaaggaagttttacaatattaaattctatta |
35863839 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 13236190 - 13236346
Alignment:
| Q |
1 |
attactattgttttggtgttgccacatgcccctttc-ttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcac |
99 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||| ||||||||||||||||| | ||||||||||||||||| |||| |||||||||||||||||||| |
|
|
| T |
13236190 |
attactattgttttggtgttgccacatgtccctttcattttttacaaatgctctcaccatattgatcctcacaacatgctctcaccacaatcatcctcac |
13236289 |
T |
|
| Q |
100 |
atatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta |
156 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13236290 |
atatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta |
13236346 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 1864993 - 1864838
Alignment:
| Q |
1 |
attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca |
100 |
Q |
| |
|
|||| |||||||||||||||| |||||| |||||||||||||||||||||||| | |||||||||| ||||||||||| ||||||||||||||||||||| |
|
|
| T |
1864993 |
attattattgttttggtgttgtcacatgtccctttcttttttacaaatgctctcaccatattgatcttcacaaaatgctctcaccacaatcatcctcaca |
1864894 |
T |
|
| Q |
101 |
tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta |
156 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1864893 |
tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta |
1864838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 37523640 - 37523795
Alignment:
| Q |
1 |
attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca |
100 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||| ||||||||| ||||||||||||||||||||| |
|
|
| T |
37523640 |
attactattgttttggtgttgccacatgtccctttcttttttacaaatgctctcaccatattgatccttacaaaatgctctcaccacaatcatcctcaca |
37523739 |
T |
|
| Q |
101 |
tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta |
156 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |
|
|
| T |
37523740 |
tatttgtatttaatgttcatgtataaaatgaagttttacaatattaaattctatta |
37523795 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 49780049 - 49780205
Alignment:
| Q |
1 |
attactattgtttt-ggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcac |
99 |
Q |
| |
|
|||||||||||||| ||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||| | ||||||||||||||||||| |
|
|
| T |
49780049 |
attactattgtttttggtgttgccacatatccctttcttttttacaaatgctctcaccatattgatcctcacaaaatactttcaccacaatcatcctcac |
49780148 |
T |
|
| Q |
100 |
atatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta |
156 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
49780149 |
atatttgtatttaatgttcatgtaaaaaaggaagttttacaatatcaaattctatta |
49780205 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 37519424 - 37519551
Alignment:
| Q |
1 |
attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca |
100 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||| ||||||||| ||||||||||||||||||||| |
|
|
| T |
37519424 |
attactattgttttggtgttgccacatgtccctttcttttttacaaatgctctcaccatattgatccttacaaaatgctctcaccacaatcatcctcaca |
37519523 |
T |
|
| Q |
101 |
tatttgtatttaatgttcatgtataaaa |
128 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
37519524 |
tatttgtatttaatgttcatgtataaaa |
37519551 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 32 - 151
Target Start/End: Original strand, 14288269 - 14288388
Alignment:
| Q |
32 |
ctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaagga |
131 |
Q |
| |
|
|||||||||| |||||| |||| | |||||||||||||||||||||| ||||||||| ||||||||||| ||| ||||||||||| ||| ||||||||| |
|
|
| T |
14288269 |
ctttctttttaacaaatactctcaccatattgatcctcacaaaatgctctcaccacattcatcctcacaagtttctatttaatgtttatgaataaaagga |
14288368 |
T |
|
| Q |
132 |
agttttacaatatcaaattc |
151 |
Q |
| |
|
|||||| ||| |||||||| |
|
|
| T |
14288369 |
agtttttcaaattcaaattc |
14288388 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 37 - 153
Target Start/End: Complemental strand, 31928185 - 31928069
Alignment:
| Q |
37 |
ttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagttt |
136 |
Q |
| |
|
|||||||||||| |||| | || ||| ||||||||||||| | ||||||||| ||||||||||| |||| ||||||||||| || ||||||||||||||| |
|
|
| T |
31928185 |
ttttttacaaatactctcaccacattcatcctcacaaaatactctcaccacattcatcctcacaaatttatatttaatgtttatatataaaaggaagttt |
31928086 |
T |
|
| Q |
137 |
tacaatatcaaattcta |
153 |
Q |
| |
|
|||||| |||| ||||| |
|
|
| T |
31928085 |
tacaatttcaatttcta |
31928069 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 38 - 137
Target Start/End: Original strand, 55550069 - 55550167
Alignment:
| Q |
38 |
tttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagtttt |
137 |
Q |
| |
|
||||||||||| |||| | || ||| ||||||||||| | | ||||||||| ||| ||||||| |||||||||||||| | ||| ||||||||||||||| |
|
|
| T |
55550069 |
tttttacaaatactctcaccacattcatcctcacaaa-tactctcaccacattcaacctcacaaatttgtatttaatgcttatgaataaaaggaagtttt |
55550167 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 137
Target Start/End: Complemental strand, 49716613 - 49716515
Alignment:
| Q |
38 |
tttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagtttt |
137 |
Q |
| |
|
||||||||||| |||| || ||| ||||||||||| | | ||||||||| ||| ||||||| |||||||||||||| | ||| ||||||||||||||| |
|
|
| T |
49716613 |
tttttacaaatactctcgccacattcatcctcacaaa-tactctcaccacattcaccctcacaaatttgtatttaatgcttatgaataaaaggaagtttt |
49716515 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 136
Target Start/End: Complemental strand, 49714023 - 49713991
Alignment:
| Q |
104 |
ttgtatttaatgttcatgtataaaaggaagttt |
136 |
Q |
| |
|
|||||||||| |||||||||||||||||||||| |
|
|
| T |
49714023 |
ttgtatttaaagttcatgtataaaaggaagttt |
49713991 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 140; Significance: 2e-73; HSPs: 10)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 48770675 - 48770830
Alignment:
| Q |
1 |
attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca |
100 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
48770675 |
attactattgttttggtgttgccacatgtccctttcttttttacaaatgctctcaccatattgatcctcacaaaatgctctcaccacaatcatcctcaca |
48770774 |
T |
|
| Q |
101 |
tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta |
156 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48770775 |
tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta |
48770830 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 27347054 - 27346899
Alignment:
| Q |
1 |
attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca |
100 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
27347054 |
attactattgttttggtgttgccacatgtccctttcttttttacaaatgctctcaccatattgatcctcacaaaatgctctcactacaatcatcctcaca |
27346955 |
T |
|
| Q |
101 |
tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta |
156 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27346954 |
tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta |
27346899 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 37384125 - 37384280
Alignment:
| Q |
1 |
attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca |
100 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||| ||||||||||| | |||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
37384125 |
attactattgttttggtgttgccacatgtccctttctttttcacaaatgctctcaccatattgatcctcacaaaatgctctcaccacaatcatcctcaca |
37384224 |
T |
|
| Q |
101 |
tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta |
156 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
37384225 |
tatttgtatttaatgttcatgtataaaaggaagttttacaatattaaattctatta |
37384280 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 6300576 - 6300731
Alignment:
| Q |
1 |
attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca |
100 |
Q |
| |
|
|||| |||| |||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
6300576 |
attattattattttggtgttgccacatgtccctttcttttttacaaatgctctcaccatattgatcctcacaaaatgctctcactacaatcatcctcaca |
6300675 |
T |
|
| Q |
101 |
tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta |
156 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6300676 |
tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta |
6300731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 24493778 - 24493928
Alignment:
| Q |
1 |
attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca |
100 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||| |||||||||||| | ||||||||| ||||||||||| |
|
|
| T |
24493778 |
attactattgttttggtgttgccacatgtccctttcttttttacaaatgctctcaccatattgttcctcacaaaatactctcaccacattcatcctcaca |
24493877 |
T |
|
| Q |
101 |
tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattc |
151 |
Q |
| |
|
|||||||||||||| | ||| ||||||||||||||| ||| |||||||| |
|
|
| T |
24493878 |
aatttgtatttaatgcttatgaataaaaggaagtttttcaaattcaaattc |
24493928 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 12 - 156
Target Start/End: Complemental strand, 2349460 - 2349307
Alignment:
| Q |
12 |
tttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacat---------a |
102 |
Q |
| |
|
||||||||| |||||| |||||||||||||||||||||||| | | ||||||||||||||||| || |||||||||| |||||||||| | |
|
|
| T |
2349460 |
tttggtgttttcacatgtccctttcttttttacaaatgctctcaccttattgatcctcacaaaacgctttcaccacaattatcctcacatatttccgata |
2349361 |
T |
|
| Q |
103 |
tttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta |
156 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
2349360 |
tttgtatttaatgttcatgtataaaaagaagttttacaatatcaaattctatta |
2349307 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 37 - 153
Target Start/End: Complemental strand, 16048368 - 16048252
Alignment:
| Q |
37 |
ttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagttt |
136 |
Q |
| |
|
|||||||||||| |||| | || ||| ||||||||||||| | ||||||||| ||||||||||| ||||||||||| |||| || || |||||||||||| |
|
|
| T |
16048368 |
ttttttacaaatactctcaccacattcatcctcacaaaatactctcaccacattcatcctcacaaatttgtatttagtgtttatatacaaaaggaagttt |
16048269 |
T |
|
| Q |
137 |
tacaatatcaaattcta |
153 |
Q |
| |
|
|||||| |||| ||||| |
|
|
| T |
16048268 |
tacaatttcaatttcta |
16048252 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 137
Target Start/End: Complemental strand, 52508058 - 52507960
Alignment:
| Q |
38 |
tttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagtttt |
137 |
Q |
| |
|
||||||||||| |||| | || ||| ||||||||||| | | ||||||||| ||| ||||||| || ||||||||||| | ||| ||||||||||||||| |
|
|
| T |
52508058 |
tttttacaaatactctcaccacattcatcctcacaaa-tactctcaccacattcaacctcacaaatctgtatttaatgcttatgaataaaaggaagtttt |
52507960 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 81 - 151
Target Start/End: Original strand, 16650210 - 16650280
Alignment:
| Q |
81 |
tcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattc |
151 |
Q |
| |
|
|||||||| ||| ||||||| |||||||||||||| | ||| ||||||||||||||| ||| |||||||| |
|
|
| T |
16650210 |
tcaccacattcaacctcacaaatttgtatttaatgcttatgaataaaaggaagtttttcaaattcaaattc |
16650280 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 136
Target Start/End: Original strand, 16652827 - 16652859
Alignment:
| Q |
104 |
ttgtatttaatgttcatgtataaaaggaagttt |
136 |
Q |
| |
|
|||||||||| |||||||||||||||||||||| |
|
|
| T |
16652827 |
ttgtatttaaagttcatgtataaaaggaagttt |
16652859 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0376 (Bit Score: 136; Significance: 4e-71; HSPs: 1)
Name: scaffold0376
Description:
Target: scaffold0376; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 14250 - 14405
Alignment:
| Q |
1 |
attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca |
100 |
Q |
| |
|
|||||||||||||||||||||| ||||| |||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
14250 |
attactattgttttggtgttgctacatgtccctttcttttttacaaatgctctcaccatattgatcctcacaaaatgctctcaccacaatcatcctcaca |
14349 |
T |
|
| Q |
101 |
tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta |
156 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14350 |
tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta |
14405 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 136; Significance: 4e-71; HSPs: 5)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 12730766 - 12730611
Alignment:
| Q |
1 |
attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca |
100 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||| ||||||| ||||||||||||| |
|
|
| T |
12730766 |
attactattgttttggtgttgccacatgtccctttcttttttacaaatgctctcaccatattgatcctcacaaaatgctctcaccagaatcatcctcaca |
12730667 |
T |
|
| Q |
101 |
tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta |
156 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12730666 |
tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta |
12730611 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 12773193 - 12773348
Alignment:
| Q |
1 |
attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca |
100 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||| |||| ||||||| ||||||||||||||||||||| |
|
|
| T |
12773193 |
attactattgttttggtgttgccacatgtccctttcttttttacaaatgctctcaccatattgatactcataaaatgctctcaccacaatcatcctcaca |
12773292 |
T |
|
| Q |
101 |
tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta |
156 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12773293 |
tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta |
12773348 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 19 - 156
Target Start/End: Complemental strand, 12682024 - 12681887
Alignment:
| Q |
19 |
ttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttc |
118 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
12682024 |
ttgccacatgtccctttcttttttacaaatgctctcaccatattgatcctcacaaaatgctctcaccagaatcatcctcacatatttgtatttaatgttc |
12681925 |
T |
|
| Q |
119 |
atgtataaaaggaagttttacaatatcaaattctatta |
156 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12681924 |
atgtataaaaggaagttttacaatatcaaattctatta |
12681887 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 38 - 137
Target Start/End: Complemental strand, 42239812 - 42239714
Alignment:
| Q |
38 |
tttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagtttt |
137 |
Q |
| |
|
||||||||||| |||| | || ||| ||||||||||| | | ||||||||| ||| ||||||| |||||||||||||| | ||| ||||||||||||||| |
|
|
| T |
42239812 |
tttttacaaatactctcaccacattcatcctcacaaa-tactctcaccacattcaacctcacaaatttgtatttaatgcttatgaataaaaggaagtttt |
42239714 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 38 - 137
Target Start/End: Complemental strand, 46053471 - 46053373
Alignment:
| Q |
38 |
tttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagtttt |
137 |
Q |
| |
|
||||||||||| |||| | || ||| ||||||||||| | | ||||||||| ||| ||||||| |||||||||||||| | ||| ||||||||||||||| |
|
|
| T |
46053471 |
tttttacaaatactctcaccacattcatcctcacaaa-tactctcaccacattcaacctcacaaatttgtatttaatgcttatgaataaaaggaagtttt |
46053373 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0090 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0090
Description:
Target: scaffold0090; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 41227 - 41382
Alignment:
| Q |
1 |
attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca |
100 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||| ||||||||||||| | |||||||||||||||||||| | ||||||||||||||||||||| |
|
|
| T |
41227 |
attactattgttttggtgttgccacatgtccctttctttattacaaatgctctcaccatattgatcctcacaaaatactctcaccacaatcatcctcaca |
41326 |
T |
|
| Q |
101 |
tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta |
156 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41327 |
tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta |
41382 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 132; Significance: 1e-68; HSPs: 15)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 25200614 - 25200769
Alignment:
| Q |
1 |
attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca |
100 |
Q |
| |
|
|||||||||||||||||||||||||||| | |||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||| ||||| |
|
|
| T |
25200614 |
attactattgttttggtgttgccacatgtctctttcttttttacaaatgctctcaccatattgatcctcacaaaatgctctcaccacaatcatcatcaca |
25200713 |
T |
|
| Q |
101 |
tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta |
156 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25200714 |
tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta |
25200769 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 30334037 - 30333884
Alignment:
| Q |
1 |
attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca |
100 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
30334037 |
attactattgttttggtgttgccacatgtccctttcttttttacaaatgctctcaccatattgatcctcacaaaatgctctcaccacaatcatcctcaca |
30333938 |
T |
|
| Q |
101 |
tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctat |
154 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || |||||||||||||||||| |
|
|
| T |
30333937 |
tatttgtatttaatgttcatgtataaaaggaaattctacaatatcaaattctat |
30333884 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 7782726 - 7782570
Alignment:
| Q |
1 |
attactattgttttggtgttgccacatgcccctttctttttt-acaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcac |
99 |
Q |
| |
|
||||||||||||||||| |||||||||| |||||| |||||| ||||||||||| | |||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
7782726 |
attactattgttttggtcttgccacatgtccctttttttttttacaaatgctctcaccatattgatcctcacaaaatgccctcaccacaatcatcctcac |
7782627 |
T |
|
| Q |
100 |
atatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta |
156 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
7782626 |
atatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattatatta |
7782570 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 7832000 - 7831844
Alignment:
| Q |
1 |
attactattgttttggtgttgccacatgcccctttctttttt-acaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcac |
99 |
Q |
| |
|
||||||||||||||||| |||||||||| |||||| |||||| ||||||||||| | |||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
7832000 |
attactattgttttggtcttgccacatgtccctttttttttttacaaatgctctcaccatattgatcctcacaaaatgccctcaccacaatcatcctcac |
7831901 |
T |
|
| Q |
100 |
atatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta |
156 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
7831900 |
atatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattatatta |
7831844 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 18665978 - 18665823
Alignment:
| Q |
1 |
attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca |
100 |
Q |
| |
|
|||||||||||||||||| ||||||||| |||||||||||||||||||||||| | |||||| || ||||||||| | ||||||||||||||||||||| |
|
|
| T |
18665978 |
attactattgttttggtggtgccacatgtccctttcttttttacaaatgctctcaccatattaataatcacaaaatactctcaccacaatcatcctcaca |
18665879 |
T |
|
| Q |
101 |
tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta |
156 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
18665878 |
tatttgtatttaatgttcatgtataaaaggaagttttacgatatcaaattctatta |
18665823 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 37 - 153
Target Start/End: Complemental strand, 4971225 - 4971109
Alignment:
| Q |
37 |
ttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagttt |
136 |
Q |
| |
|
|||||||||||| |||| | || ||| ||||||||||||| | ||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||| |
|
|
| T |
4971225 |
ttttttacaaatactctcaccacattcatcctcacaaaatactctcaccacattcatcctcacaaatttgtatttaatgtttatgtataaaaggaagttt |
4971126 |
T |
|
| Q |
137 |
tacaatatcaaattcta |
153 |
Q |
| |
|
|||||| |||| ||||| |
|
|
| T |
4971125 |
tacaatttcaatttcta |
4971109 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 37 - 153
Target Start/End: Original strand, 14105128 - 14105244
Alignment:
| Q |
37 |
ttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagttt |
136 |
Q |
| |
|
|||||||||||| |||| | || ||| ||||||||||||| | ||||||||| ||||||||||| ||||||||||| |||| || ||||||||||||||| |
|
|
| T |
14105128 |
ttttttacaaatactctcaccacattcatcctcacaaaatactctcaccacattcatcctcacaaatttgtatttagtgtttatatataaaaggaagttt |
14105227 |
T |
|
| Q |
137 |
tacaatatcaaattcta |
153 |
Q |
| |
|
|||||| |||| ||||| |
|
|
| T |
14105228 |
tacaatttcaatttcta |
14105244 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 23102992 - 23103104
Alignment:
| Q |
2 |
ttactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacat |
101 |
Q |
| |
|
|||||||| ||||||||||| || || |||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||| ||||||| ||| |
|
|
| T |
23102992 |
ttactattcttttggtgttgtcatgtgtccctttcttttttacaaatgctctcaccatattgatcctcacaaaatgctctcaccacattcatccttacaa |
23103091 |
T |
|
| Q |
102 |
atttgtatttaat |
114 |
Q |
| |
|
||| |||||||| |
|
|
| T |
23103092 |
gtttctatttaat |
23103104 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 37 - 153
Target Start/End: Original strand, 33854887 - 33855003
Alignment:
| Q |
37 |
ttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagttt |
136 |
Q |
| |
|
|||||||||||| |||| | || ||| ||||||||||||| | ||||||||| ||||||||||| |||| |||||| |||| || ||||||||||||||| |
|
|
| T |
33854887 |
ttttttacaaatactctcaccacattcatcctcacaaaatactctcaccacattcatcctcacaaatttttatttagtgtttatatataaaaggaagttt |
33854986 |
T |
|
| Q |
137 |
tacaatatcaaattcta |
153 |
Q |
| |
|
|||||| |||| ||||| |
|
|
| T |
33854987 |
tacaatttcaatttcta |
33855003 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 38 - 122
Target Start/End: Original strand, 19194064 - 19194148
Alignment:
| Q |
38 |
tttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgt |
122 |
Q |
| |
|
||||||||||| || | | ||||| | ||||||||||||| || |||||||||||||||| | ||||||||||||||||||||| |
|
|
| T |
19194064 |
tttttacaaatactattacaatattcaccctcacaaaatgctctgaccacaatcatcctcataaatttgtatttaatgttcatgt |
19194148 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 151
Target Start/End: Complemental strand, 14787284 - 14787172
Alignment:
| Q |
38 |
tttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagtttt |
137 |
Q |
| |
|
||||||||||| |||| | || ||| ||||||||||| | | ||||||||| ||| | ||||| |||||||||||||| | ||| ||||||||||||||| |
|
|
| T |
14787284 |
tttttacaaatactctcaccacattcatcctcacaaa-tactctcaccacattcaacatcacaaatttgtatttaatgcttatgaataaaaggaagtttt |
14787186 |
T |
|
| Q |
138 |
acaatatcaaattc |
151 |
Q |
| |
|
||| |||||||| |
|
|
| T |
14787185 |
tcaaattcaaattc |
14787172 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 137
Target Start/End: Complemental strand, 14787507 - 14787409
Alignment:
| Q |
38 |
tttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagtttt |
137 |
Q |
| |
|
||||||||||| |||| | || ||| ||||||||||| | | ||||||||| ||| | ||| | |||||||||||||| | ||| ||||||||||||||| |
|
|
| T |
14787507 |
tttttacaaatactctcaccacattcatcctcacaaa-tactctcaccacattcaacatcataaatttgtatttaatgcttatgaataaaaggaagtttt |
14787409 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 137
Target Start/End: Complemental strand, 14787730 - 14787632
Alignment:
| Q |
38 |
tttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagtttt |
137 |
Q |
| |
|
||||||||||| |||| | || ||| ||||||||||| | | ||||||||| ||| | ||| | |||||||||||||| | ||| ||||||||||||||| |
|
|
| T |
14787730 |
tttttacaaatactctcaccacattcatcctcacaaa-tactctcaccacattcaacatcataaatttgtatttaatgcttatgaataaaaggaagtttt |
14787632 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 137
Target Start/End: Complemental strand, 14787953 - 14787855
Alignment:
| Q |
38 |
tttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagtttt |
137 |
Q |
| |
|
||||||||||| |||| | || ||| ||||||||||| | | ||||||||| ||| | ||| | |||||||||||||| | ||| ||||||||||||||| |
|
|
| T |
14787953 |
tttttacaaatactctcaccacattcatcctcacaaa-tactctcaccacattcaacatcataaatttgtatttaatgcttatgaataaaaggaagtttt |
14787855 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 137
Target Start/End: Complemental strand, 14788398 - 14788301
Alignment:
| Q |
39 |
ttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagtttt |
137 |
Q |
| |
|
|||||||||| |||| | || ||| ||||||||||| | | ||||||||| ||| | ||| | |||||||||||||| | ||| ||||||||||||||| |
|
|
| T |
14788398 |
ttttacaaatactctcaccacattcatcctcacaaa-tactctcaccacattcaacatcataaatttgtatttaatgcttatgaataaaaggaagtttt |
14788301 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0131 (Bit Score: 128; Significance: 3e-66; HSPs: 2)
Name: scaffold0131
Description:
Target: scaffold0131; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 29135 - 28980
Alignment:
| Q |
1 |
attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca |
100 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||| ||| | ||||||||||||||||| |||| || |||||||||||||||||| |
|
|
| T |
29135 |
attactattgttttggtgttgccacatgtccctttcttttttacaaatgatctcaccatattgatcctcacaacatgctctaaccacaatcatcctcaca |
29036 |
T |
|
| Q |
101 |
tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta |
156 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29035 |
tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta |
28980 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0131; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 156
Target Start/End: Original strand, 39837 - 39874
Alignment:
| Q |
119 |
atgtataaaaggaagttttacaatatcaaattctatta |
156 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
39837 |
atgtataaaaggaagttttacaatattaaattctatta |
39874 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 128; Significance: 3e-66; HSPs: 12)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 37818190 - 37818345
Alignment:
| Q |
1 |
attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca |
100 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||| |||||||||| | ||||||||||||||||||||| |
|
|
| T |
37818190 |
attactattgttttggtgttgccacatgtccctttcttttttacaaatgctctcaccatattgattctcacaaaatactctcaccacaatcatcctcaca |
37818289 |
T |
|
| Q |
101 |
tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta |
156 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
37818290 |
tatttgtatttaatgttcatgtaaaaaaggaagttttacaatatcaaattctatta |
37818345 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 39435895 - 39436050
Alignment:
| Q |
1 |
attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca |
100 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||| |||||||| ||||| |||| | |
|
|
| T |
39435895 |
attactattgttttggtgttgccacatgtccctttcttttttacaaatgctctcaccatattgatcctcacaaaatgctctcaccaccatcattctcata |
39435994 |
T |
|
| Q |
101 |
tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta |
156 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39435995 |
tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta |
39436050 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 3 - 156
Target Start/End: Original strand, 41912456 - 41912609
Alignment:
| Q |
3 |
tactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacata |
102 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||| || ||||||||| | ||||||||||||||||||||||| |
|
|
| T |
41912456 |
tactattgttttggtgttgccacatgtccctttcttttttacaaatgctctcaccatattgttcatcacaaaatactctcaccacaatcatcctcacata |
41912555 |
T |
|
| Q |
103 |
tttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta |
156 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41912556 |
tttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta |
41912609 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 28659357 - 28659512
Alignment:
| Q |
1 |
attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca |
100 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||| |||||||||| | ||||||||||||||||||||| |
|
|
| T |
28659357 |
attactattgttttggtgttgccacatgtccctttcttttttacaaatgctctcaccatattgattctcacaaaatactctcaccacaatcatcctcaca |
28659456 |
T |
|
| Q |
101 |
tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta |
156 |
Q |
| |
|
|||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
28659457 |
tattggtatttaatgttcatgtaaaaaaggaagttttacaatatcaaattctatta |
28659512 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 33351681 - 33351531
Alignment:
| Q |
1 |
attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca |
100 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||| | |||||||||| | ||||||||| ||||||||||| |
|
|
| T |
33351681 |
attactattgttttggtgttgccacatgtccctttcttttttacaaatgctctcaccatattttttctcacaaaattctctcaccacattcatcctcaca |
33351582 |
T |
|
| Q |
101 |
tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattc |
151 |
Q |
| |
|
|||||||||||||| | ||| ||||||||||||||| ||| |||||||| |
|
|
| T |
33351581 |
aatttgtatttaatgcttatgaataaaaggaagtttttcaaattcaaattc |
33351531 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 11042422 - 11042287
Alignment:
| Q |
2 |
ttactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacat |
101 |
Q |
| |
|
|||||||| |||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||| | |||||||| ||||||||| | |
|
|
| T |
11042422 |
ttactattcttttggtgttgccatgtgtccctttcttttttacaaatgctctcatcatattgatcctcacaaaatactttcaccacattcatcctcaaaa |
11042323 |
T |
|
| Q |
102 |
atttgtatttaatgttcatgtataaaaggaagtttt |
137 |
Q |
| |
|
||| ||||||||||| | | ||||||||||||||| |
|
|
| T |
11042322 |
gtttctatttaatgtttacgaataaaaggaagtttt |
11042287 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 80 - 153
Target Start/End: Original strand, 3564746 - 3564819
Alignment:
| Q |
80 |
ctcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattcta |
153 |
Q |
| |
|
||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||| |||| ||||| |
|
|
| T |
3564746 |
ctcaccacattcatcctcacaaatttgtatttaatgtttatgtataaaaggaagttttacaatttcaatttcta |
3564819 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 38 - 137
Target Start/End: Original strand, 2870743 - 2870841
Alignment:
| Q |
38 |
tttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagtttt |
137 |
Q |
| |
|
||||||||||| |||| | || ||| ||||||||||| | | ||||||||| ||| ||||||| |||||||||||||| | ||| ||||||||||||||| |
|
|
| T |
2870743 |
tttttacaaatactctcaccacattcatcctcacaaa-tactctcaccacattcaacctcacaaatttgtatttaatgcttatgaataaaaggaagtttt |
2870841 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 38 - 137
Target Start/End: Original strand, 26913007 - 26913105
Alignment:
| Q |
38 |
tttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagtttt |
137 |
Q |
| |
|
||||||||||| |||| | || ||| ||||||||||| | | ||||||||| ||| ||||||| |||||||||||||| | ||| ||||||||||||||| |
|
|
| T |
26913007 |
tttttacaaatactctcaccacattcatcctcacaaa-tactctcaccacattcaacctcacaaatttgtatttaatgcttatgaataaaaggaagtttt |
26913105 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 151
Target Start/End: Complemental strand, 3650475 - 3650363
Alignment:
| Q |
38 |
tttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagtttt |
137 |
Q |
| |
|
|||||| |||| |||| | || ||| ||||||||||| | | ||||||||| ||| ||||||| |||||||||||||| | ||| ||||||||||||||| |
|
|
| T |
3650475 |
tttttataaatactctcaccacattcatcctcacaaa-tactctcaccacattcaacctcacaaatttgtatttaatgcttatgaataaaaggaagtttt |
3650377 |
T |
|
| Q |
138 |
acaatatcaaattc |
151 |
Q |
| |
|
||| |||||||| |
|
|
| T |
3650376 |
tcaaattcaaattc |
3650363 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 151
Target Start/End: Original strand, 24255560 - 24255672
Alignment:
| Q |
38 |
tttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagtttt |
137 |
Q |
| |
|
||||||||||| |||| | || ||| ||||||||||| | | || |||||| ||| ||||||| |||||||||||||| | ||| ||||||||||||||| |
|
|
| T |
24255560 |
tttttacaaatactctcaccacattcatcctcacaaa-tactcttaccacattcaacctcacaaatttgtatttaatgcttatgaataaaaggaagtttt |
24255658 |
T |
|
| Q |
138 |
acaatatcaaattc |
151 |
Q |
| |
|
||| |||||||| |
|
|
| T |
24255659 |
tcaaattcaaattc |
24255672 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 37 - 137
Target Start/End: Complemental strand, 21418759 - 21418660
Alignment:
| Q |
37 |
ttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagttt |
136 |
Q |
| |
|
|||||| ||||| |||| | || ||| ||||||||||| | | ||||||||| ||| ||||||| |||||||||||||| | ||| |||||||||||||| |
|
|
| T |
21418759 |
ttttttgcaaatactctcaccacattcatcctcacaaa-tactctcaccacattcaacctcacaaatttgtatttaatgcttatgaataaaaggaagttt |
21418661 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0316 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: scaffold0316
Description:
Target: scaffold0316; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 8656 - 8499
Alignment:
| Q |
1 |
attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcac- |
99 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||| ||| | |||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
8656 |
attactattgttttggtgttgccacatgtccctttcttttttacaaatgttctcaccatattgatcctcacaaaatgctctcaccacaatcatcctcaca |
8557 |
T |
|
| Q |
100 |
-atatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta |
156 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8556 |
tatatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta |
8499 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 124; Significance: 6e-64; HSPs: 9)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 43148 - 42993
Alignment:
| Q |
1 |
attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||| |||||||||||||||||||||||||| | ||||||| |||||||||| | ||||||||||||||||||||| |
|
|
| T |
43148 |
attactattgttttggtgttgccagatgtccctttcttttttacaaatgctctaaccttattgattctcacaaaatactctcaccacaatcatcctcaca |
43049 |
T |
|
| Q |
101 |
tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattctatta |
156 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
43048 |
tatttgtatttaatgttcatgtataaaaggaagttttacaatattaaattctatta |
42993 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 10118540 - 10118390
Alignment:
| Q |
1 |
attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca |
100 |
Q |
| |
|
||||||||||||||||||||| || ||| ||||||||||||||||||| |||| ||||||||| |||||||||||| | ||||||||| ||||||||||| |
|
|
| T |
10118540 |
attactattgttttggtgttgtcatatgtccctttcttttttacaaatactctcatcatattgttcctcacaaaatactctcaccacattcatcctcaca |
10118441 |
T |
|
| Q |
101 |
tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattc |
151 |
Q |
| |
|
|||||||||||||| | ||| ||||||||||||||| ||| |||||||| |
|
|
| T |
10118440 |
aatttgtatttaatgcttatgaataaaaggaagtttttcaaattcaaattc |
10118390 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 31 - 151
Target Start/End: Complemental strand, 10018101 - 10017981
Alignment:
| Q |
31 |
cctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaagg |
130 |
Q |
| |
|
||||||||||||||||||||||| | ||||||| |||||||||||||| ||||||||| ||||||||||| |||||||||||||| | ||| |||||||| |
|
|
| T |
10018101 |
cctttcttttttacaaatgctctcaccatattgttcctcacaaaatgctctcaccacattcatcctcacaaatttgtatttaatgcttatgaataaaagg |
10018002 |
T |
|
| Q |
131 |
aagttttacaatatcaaattc |
151 |
Q |
| |
|
||||||| ||| |||||||| |
|
|
| T |
10018001 |
aagtttttcaaattcaaattc |
10017981 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 10255588 - 10255438
Alignment:
| Q |
1 |
attactattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcaca |
100 |
Q |
| |
|
|||| ||||||||||||||||||||| ||||||||||||||||||| | | | |||||| |||||||||||||| ||||| ||| ||||||||||| |
|
|
| T |
10255588 |
attattattgttttggtgttgccacaatttcctttcttttttacaaatgttttcaccatattattcctcacaaaatgctctcactacattcatcctcaca |
10255489 |
T |
|
| Q |
101 |
tatttgtatttaatgttcatgtataaaaggaagttttacaatatcaaattc |
151 |
Q |
| |
|
|||||||||||||| | ||| ||||||||||||||| ||| |||||||| |
|
|
| T |
10255488 |
aatttgtatttaatgcttatgaataaaaggaagtttttcaaattcaaattc |
10255438 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 37 - 153
Target Start/End: Original strand, 41756869 - 41756985
Alignment:
| Q |
37 |
ttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagttt |
136 |
Q |
| |
|
|||||||||||| |||| | || ||| ||||||||||||| | ||||||||| ||||||||||| |||| |||||| |||| || ||||||||||||||| |
|
|
| T |
41756869 |
ttttttacaaatactctcaccacattcatcctcacaaaatactctcaccacattcatcctcacaaatttttatttagtgtttatatataaaaggaagttt |
41756968 |
T |
|
| Q |
137 |
tacaatatcaaattcta |
153 |
Q |
| |
|
|||||| |||| ||||| |
|
|
| T |
41756969 |
tacaatttcaatttcta |
41756985 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 38 - 156
Target Start/End: Original strand, 37797345 - 37797462
Alignment:
| Q |
38 |
tttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagtttt |
137 |
Q |
| |
|
||||||||||| |||| | || ||| ||||||||||| | | ||||||||| ||| ||||||| |||||||||||||| | ||| ||||||||||||||| |
|
|
| T |
37797345 |
tttttacaaatactctcaccacattcatcctcacaaa-tactctcaccacattcaacctcacaaatttgtatttaatgcttatgaataaaaggaagtttt |
37797443 |
T |
|
| Q |
138 |
acaatatcaaattctatta |
156 |
Q |
| |
|
||| |||||||| |||| |
|
|
| T |
37797444 |
tcaaattcaaattcaatta |
37797462 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 38 - 137
Target Start/End: Complemental strand, 27276289 - 27276191
Alignment:
| Q |
38 |
tttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagtttt |
137 |
Q |
| |
|
||||||||||| |||| | || ||| ||||||||||| | | ||||||||| ||| ||||||| |||||||||||||| | ||| ||||||||||||||| |
|
|
| T |
27276289 |
tttttacaaatactctcaccacattcatcctcacaaa-tactctcaccacattcaacctcacaaatttgtatttaatgcttatgaataaaaggaagtttt |
27276191 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 122
Target Start/End: Complemental strand, 58173 - 58089
Alignment:
| Q |
38 |
tttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgt |
122 |
Q |
| |
|
||||||||||| || | | ||||| | ||||||||||||| || || |||||||||||| | ||||||||||||||||||||| |
|
|
| T |
58173 |
tttttacaaatactatcacaatattcaccctcacaaaatgctctgactacaatcatcctcgtaaatttgtatttaatgttcatgt |
58089 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 151
Target Start/End: Original strand, 15321424 - 15321536
Alignment:
| Q |
38 |
tttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagtttt |
137 |
Q |
| |
|
||||||||||| |||| | || ||| ||||||||||| | | |||||||| ||| | ||| | |||||||||||||| | ||| ||||||||||||||| |
|
|
| T |
15321424 |
tttttacaaatactctcaccacattcatcctcacaaa-tactttcaccacattcaacatcataaatttgtatttaatgcttatgaataaaaggaagtttt |
15321522 |
T |
|
| Q |
138 |
acaatatcaaattc |
151 |
Q |
| |
|
||| |||||||| |
|
|
| T |
15321523 |
tcaaattcaaattc |
15321536 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0073 (Bit Score: 73; Significance: 2e-33; HSPs: 3)
Name: scaffold0073
Description:
Target: scaffold0073; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 11 - 151
Target Start/End: Complemental strand, 48434 - 48294
Alignment:
| Q |
11 |
ttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatt |
110 |
Q |
| |
|
||||||||||| || || |||||||||||||||||||||||| | |||||||||||||||||||| | ||||||||| ||||||||||| ||| |||| |
|
|
| T |
48434 |
ttttggtgttgacatgtgtccctttcttttttacaaatgctctcaccatattgatcctcacaaaatactctcaccacattcatcctcacaagtttctatt |
48335 |
T |
|
| Q |
111 |
taatgttcatgtataaaaggaagttttacaatatcaaattc |
151 |
Q |
| |
|
||||||| ||| ||||||||||||||| ||| |||||||| |
|
|
| T |
48334 |
taatgtttatgaataaaaggaagtttttcaaattcaaattc |
48294 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0073; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 11 - 151
Target Start/End: Complemental strand, 48689 - 48549
Alignment:
| Q |
11 |
ttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatt |
110 |
Q |
| |
|
||||||||||| || || |||||||||||||||||||||||| | |||||||||||||||||||| | ||||||||| ||||||||||| ||| |||| |
|
|
| T |
48689 |
ttttggtgttgacatgtgtccctttcttttttacaaatgctctcaccatattgatcctcacaaaatactctcaccacattcatcctcacaagtttctatt |
48590 |
T |
|
| Q |
111 |
taatgttcatgtataaaaggaagttttacaatatcaaattc |
151 |
Q |
| |
|
||||||| ||| ||||||||||||||| ||| |||||||| |
|
|
| T |
48589 |
taatgtttatgaataaaaggaagtttttcaaattcaaattc |
48549 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0073; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 11 - 151
Target Start/End: Complemental strand, 53220 - 53080
Alignment:
| Q |
11 |
ttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatt |
110 |
Q |
| |
|
||||||||||| || || |||||||||||||||||||||||| | |||||||||||||||||||| | ||||||||| ||||||||||| ||| |||| |
|
|
| T |
53220 |
ttttggtgttgacatgtgtccctttcttttttacaaatgctctcaccatattgatcctcacaaaatactctcaccacattcatcctcacaagtttctatt |
53121 |
T |
|
| Q |
111 |
taatgttcatgtataaaaggaagttttacaatatcaaattc |
151 |
Q |
| |
|
||||||| ||| ||||||||||||||| ||| |||||||| |
|
|
| T |
53120 |
taatgtttatgaataaaaggaagtttttcaaattcaaattc |
53080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0356 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0356
Description:
Target: scaffold0356; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 37 - 153
Target Start/End: Original strand, 2561 - 2677
Alignment:
| Q |
37 |
ttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagttt |
136 |
Q |
| |
|
|||||||||||| |||| | || ||| ||||||||||||| | ||||||||| ||||||||||| ||||||||||| |||| || ||||||||||||||| |
|
|
| T |
2561 |
ttttttacaaatactctcaccacattcatcctcacaaaatactctcaccacattcatcctcacaaatttgtatttagtgtttatatataaaaggaagttt |
2660 |
T |
|
| Q |
137 |
tacaatatcaaattcta |
153 |
Q |
| |
|
|||||| |||| ||||| |
|
|
| T |
2661 |
tacaatttcaatttcta |
2677 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0276 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0276
Description:
Target: scaffold0276; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 147
Target Start/End: Complemental strand, 114 - 4
Alignment:
| Q |
37 |
ttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagttt |
136 |
Q |
| |
|
|||||||||||| |||| | || ||| ||||||||||||| | ||||||||| ||||||||||| |||| |||||| |||| || ||||||||||||||| |
|
|
| T |
114 |
ttttttacaaatactctcaccacattcatcctcacaaaatactctcaccacattcatcctcacaaatttttatttagtgtttatatataaaaggaagttt |
15 |
T |
|
| Q |
137 |
tacaatatcaa |
147 |
Q |
| |
|
|||||| |||| |
|
|
| T |
14 |
tacaatttcaa |
4 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0050 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0050
Description:
Target: scaffold0050; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 12245 - 12129
Alignment:
| Q |
5 |
ctattgttttggtgttgccacatgcccctttcttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatt |
104 |
Q |
| |
|
||||| ||||| ||||| || || |||||| |||||||||||| ||| | |||||| ||||||||||||||| |||||||||||| |||||||| ||| |
|
|
| T |
12245 |
ctattcttttgatgttgacatgtgtccctttattttttacaaatagtcttaccatattcatcctcacaaaatgctctcaccacaatc-tcctcacaaatt |
12147 |
T |
|
| Q |
105 |
tgtatttaatgttcatgt |
122 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
12146 |
tgtatttaatgttcatgt |
12129 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0029 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0029
Description:
Target: scaffold0029; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 137
Target Start/End: Original strand, 102998 - 103097
Alignment:
| Q |
37 |
ttttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagttt |
136 |
Q |
| |
|
|||||||||||| |||| | || ||| ||||||||||| | | ||||||||| ||| ||||||| |||||||||||||| | ||| |||||||||||||| |
|
|
| T |
102998 |
ttttttacaaatactctcaccacattcatcctcacaaa-tactctcaccacattcaacctcacaaatttgtatttaatgcttatgaataaaaggaagttt |
103096 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0770 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0770
Description:
Target: scaffold0770; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 38 - 137
Target Start/End: Original strand, 4700 - 4798
Alignment:
| Q |
38 |
tttttacaaatgctctaatcatattgatcctcacaaaatgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagtttt |
137 |
Q |
| |
|
||||||||||| |||| | || ||| ||||||||||| | | ||||||||| ||| ||||||| |||||||||||||| | ||| ||||||||||||||| |
|
|
| T |
4700 |
tttttacaaatactctcaccacattcatcctcacaaa-tactctcaccacattcaacctcacaaatttgtatttaatgcttatgaataaaaggaagtttt |
4798 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0118 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0118
Description:
Target: scaffold0118; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 38 - 137
Target Start/End: Original strand, 19157 - 19257
Alignment:
| Q |
38 |
tttttacaaatgctctaatcatattgatcctcacaaa-atgcactcaccacaatcatcctcacatatttgtatttaatgttcatgtataaaaggaagttt |
136 |
Q |
| |
|
||||||||||| |||| | || ||| ||||||||||| | | ||||||||| ||| ||||||| |||||||||||||| | ||| |||||||||||||| |
|
|
| T |
19157 |
tttttacaaatactctcaccacattcatcctcacaaatactctctcaccacattcaacctcacaaatttgtatttaatgcttatgaataaaaggaagttt |
19256 |
T |
|
| Q |
137 |
t |
137 |
Q |
| |
|
| |
|
|
| T |
19257 |
t |
19257 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0003 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0003
Description:
Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 119
Target Start/End: Complemental strand, 189017 - 188973
Alignment:
| Q |
75 |
atgcactcaccacaatcatcctcacatatttgtatttaatgttca |
119 |
Q |
| |
|
|||| ||||||| ||||||||||||| |||||||||||||||||| |
|
|
| T |
189017 |
atgctctcaccataatcatcctcacaaatttgtatttaatgttca |
188973 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0003; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 119
Target Start/End: Complemental strand, 182063 - 182019
Alignment:
| Q |
75 |
atgcactcaccacaatcatcctcacatatttgtatttaatgttca |
119 |
Q |
| |
|
|||| ||| ||||||||||||||||| |||| ||||||||||||| |
|
|
| T |
182063 |
atgctctcgccacaatcatcctcacaaatttatatttaatgttca |
182019 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University