View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF15302_low_38 (Length: 427)
Name: NF15302_low_38
Description: NF15302
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15302_low_38 |
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| [»] chr3 (24 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 319; Significance: 1e-180; HSPs: 24)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 319; E-Value: 1e-180
Query Start/End: Original strand, 44 - 427
Target Start/End: Complemental strand, 46554099 - 46553725
Alignment:
| Q |
44 |
ttgggcttgaactttctaatatgctgaaggagttgggagtgattttacctttctctgatggaggtttaacaaaaatagtagactctccattatggatttc |
143 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
46554099 |
ttgggtttgaactttctaatatgctgaaggagttgggagtgattttacctttctctaatggaggtttaacaaaaatagtagactctccattatggatttc |
46554000 |
T |
 |
| Q |
144 |
caatataactcaaaagtctatcattaaagtaaatgaagtgggcacagaagctgccgcagtcactgttactggtatggtatagtgggatgtagtcagttta |
243 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||| |
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|
| T |
46553999 |
caatataactcaaaagtctatcattaaagtaaatgaagtgggcacagaagctgccgcagtcactgttactgggat-----agcgggatgtagtcagttta |
46553905 |
T |
 |
| Q |
244 |
cttctattccaaccccgatagactttgtagctgaccaccctttcttgttttttattagagaagatttgtctgctacaatactctttgttggccaagttct |
343 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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|
| T |
46553904 |
cttctattccaaccccgatagactttgtagctgaccaccctttcttgttttttattagagaagatttgtctggtacaatactctttgttggccaagttct |
46553805 |
T |
 |
| Q |
344 |
caatcctcttctgaagtgatattaattacccatacaaacaaacatccaatggatgtgtggatcaaatggatttagtttgtcgta |
427 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
46553804 |
caatcctcttctgaagtgatattaattacccataca----aacatcaaatggatgtgtggatcaaatggattgagtttgtcgta |
46553725 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 49 - 353
Target Start/End: Original strand, 46532134 - 46532433
Alignment:
| Q |
49 |
cttgaactttctaatatgctgaaggagttgggagtgattttacctttctctgatggaggtttaacaaaaatagtagactctccattatggatttccaata |
148 |
Q |
| |
|
||||||||||||||| || |||||||| ||||| ||||||||||||||| ||||||||| |||||||| | |||||||| | ||| |||| || | |
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|
| T |
46532134 |
cttgaactttctaatgtgtcaaaggagttaggagttgttttacctttctctggtggaggtttgacaaaaatggcggactctccgatttgggtttctaaca |
46532233 |
T |
 |
| Q |
149 |
taactcaaaagtctatcattaaagtaaatgaagtgggcacagaagctgccgcagtcactgttactggtatggtatagtgggatgtagtcagtttacttct |
248 |
Q |
| |
|
|| |||||| ||| ||||| ||||||||||| ||||| |||||||| ||||||||| ||||| | | |||||||| || |||||| |
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|
| T |
46532234 |
tatttcaaaattctttcattgaagtaaatgaaaaaggcactgaagctgctgcagtcactagaactggact-----attgggatgtgctcgtcctacttca |
46532328 |
T |
 |
| Q |
249 |
attccaaccccgatagactttgtagctgaccaccctttcttgttttttattagagaagatttgtctgctacaatactctttgttggccaagttctcaatc |
348 |
Q |
| |
|
||||| ||||| ||||||||||||||||||||||||||| ||||||| || ||||| |||||||||| |||||||||||||||||||||||| ||||||| |
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|
| T |
46532329 |
attccgaccccaatagactttgtagctgaccaccctttcatgtttttgataagagacgatttgtctggtacaatactctttgttggccaagtgctcaatc |
46532428 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 258 - 363
Target Start/End: Original strand, 46544909 - 46545014
Alignment:
| Q |
258 |
ccgatagactttgtagctgaccaccctttcttgttttttattagagaagatttgtctgctacaatactctttgttggccaagttctcaatcctcttctga |
357 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| || |||||||||||||||| || |||||||| |||| |||||||||||||||||||||| |
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|
| T |
46544909 |
ccgatagactttgtagctgaccaccctttcttgtttttgatcagagaagatttgtctggaacggtactctttattggacaagttctcaatcctcttctga |
46545008 |
T |
 |
| Q |
358 |
agtgat |
363 |
Q |
| |
|
|||||| |
|
|
| T |
46545009 |
agtgat |
46545014 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 257 - 353
Target Start/End: Original strand, 46535365 - 46535461
Alignment:
| Q |
257 |
cccgatagactttgtagctgaccaccctttcttgttttttattagagaagatttgtctgctacaatactctttgttggccaagttctcaatcctctt |
353 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||| || ||||||||||| |||| |||||||| ||||||||| ||||| | ||||||||| |
|
|
| T |
46535365 |
cccgatagactttgtagctgaccatcctttcttgtttttgataagagaagatttatctggtacaatacactttgttgggcaagtgcataatcctctt |
46535461 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 258 - 368
Target Start/End: Original strand, 46539437 - 46539547
Alignment:
| Q |
258 |
ccgatagactttgtagctgaccaccctttcttgttttttattagagaagatttgtctgctacaatactctttgttggccaagttctcaatcctcttctga |
357 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||| || |||||||||||||||| || |||||| | |||| |||||||| ||||||||| ||| |
|
|
| T |
46539437 |
ccgattgactttgtagctgaccaccctttcttgtttttgatcagagaagatttgtctggaacggtactctctattggacaagttctaaatcctcttgtga |
46539536 |
T |
 |
| Q |
358 |
agtgatattaa |
368 |
Q |
| |
|
||||| |||| |
|
|
| T |
46539537 |
tgtgatcttaa |
46539547 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 260 - 353
Target Start/End: Complemental strand, 4581074 - 4580981
Alignment:
| Q |
260 |
gatagactttgtagctgaccaccctttcttgttttttattagagaagatttgtctgctacaatactctttgttggccaagttctcaatcctctt |
353 |
Q |
| |
|
|||||| ||||| ||||||||||||||||||||||| || ||||||||||||||| || ||||||| |||| |||||||||||||||||| |
|
|
| T |
4581074 |
gatagaatttgtggctgaccaccctttcttgtttttgatccgagaagatttgtctggaactgtactcttcattggacaagttctcaatcctctt |
4580981 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 260 - 353
Target Start/End: Complemental strand, 4613540 - 4613447
Alignment:
| Q |
260 |
gatagactttgtagctgaccaccctttcttgttttttattagagaagatttgtctgctacaatactctttgttggccaagttctcaatcctctt |
353 |
Q |
| |
|
|||||| ||||| ||||| ||||||||||||||||| || ||||| |||||||||| || ||||||| |||| |||||||||||||||||| |
|
|
| T |
4613540 |
gatagaatttgtggctgatcaccctttcttgtttttgatcagagacgatttgtctggaactgtactcttcattggacaagttctcaatcctctt |
4613447 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 59 - 119
Target Start/End: Complemental strand, 46236694 - 46236634
Alignment:
| Q |
59 |
ctaatatgctgaaggagttgggagtgattttacctttctctgatggaggtttaacaaaaat |
119 |
Q |
| |
|
|||||| | |||||||||| |||||||||||||||||||||| ||||||||| |||||||| |
|
|
| T |
46236694 |
ctaatacgatgaaggagttaggagtgattttacctttctctgctggaggttttacaaaaat |
46236634 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 262 - 334
Target Start/End: Original strand, 51944319 - 51944391
Alignment:
| Q |
262 |
tagactttgtagctgaccaccctttcttgttttttattagagaagatttgtctgctacaatactctttgttgg |
334 |
Q |
| |
|
|||||||||||||||||||||||||||| ||| | ||||||||||||||| ||| ||||| |||||||||| |
|
|
| T |
51944319 |
tagactttgtagctgaccaccctttcttatttctgattagagaagatttgactggaacaatcatctttgttgg |
51944391 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 270 - 353
Target Start/End: Original strand, 5160714 - 5160797
Alignment:
| Q |
270 |
gtagctgaccaccctttcttgttttttattagagaagatttgtctgctacaatactctttgttggccaagttctcaatcctctt |
353 |
Q |
| |
|
|||||||||||||||||||| ||| | ||||||||||||| | ||| || || ||||||||||| ||||| |||||||||||| |
|
|
| T |
5160714 |
gtagctgaccaccctttcttatttctgattagagaagattggactggaaccattctctttgttggacaagtactcaatcctctt |
5160797 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 262 - 353
Target Start/End: Original strand, 46480222 - 46480313
Alignment:
| Q |
262 |
tagactttgtagctgaccaccctttcttgttttttattagagaagatttgtctgctacaatactctttgttggccaagttctcaatcctctt |
353 |
Q |
| |
|
|||||||||||||||||||||||||||| ||| | ||||||||||| ||| | | ||||| |||||||||| || || |||||||||||| |
|
|
| T |
46480222 |
tagactttgtagctgaccaccctttcttatttatgattagagaagacttgaccggaacaatcatctttgttggacaggtgctcaatcctctt |
46480313 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 262 - 350
Target Start/End: Original strand, 16025907 - 16025995
Alignment:
| Q |
262 |
tagactttgtagctgaccaccctttcttgttttttattagagaagatttgtctgctacaatactctttgttggccaagttctcaatcct |
350 |
Q |
| |
|
|||| ||||||||||||||||||||||| ||| | |||||||||||||| | | ||||| |||||||| || ||||| ||||||||| |
|
|
| T |
16025907 |
tagattttgtagctgaccaccctttcttatttctaattagagaagatttaaccgaaacaatcctctttgtagggcaagtactcaatcct |
16025995 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 44 - 132
Target Start/End: Complemental strand, 45883648 - 45883560
Alignment:
| Q |
44 |
ttgggcttgaactttctaatatgctgaaggagttgggagtgattttacctttctctgatggaggtttaacaaaaatagtagactctcca |
132 |
Q |
| |
|
||||||||||| |||||||||| |||||||||| |||||| ||| |||||||||| |||| |||| |||||||| || |||| |||| |
|
|
| T |
45883648 |
ttgggcttgaaacttctaatatgttgaaggagttaggagtggtttcacctttctctcgtggaagtttgacaaaaatggtggactatcca |
45883560 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 47 - 119
Target Start/End: Complemental strand, 47397220 - 47397148
Alignment:
| Q |
47 |
ggcttgaactttctaatatgctgaaggagttgggagtgattttacctttctctgatggaggtttaacaaaaat |
119 |
Q |
| |
|
|||||||| |||| ||||| |||||||||| |||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
47397220 |
ggcttgaaacttctgatatgttgaaggagttaggagtgattttacctttctccctcggaggtttaacaaaaat |
47397148 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 262 - 353
Target Start/End: Original strand, 46491135 - 46491226
Alignment:
| Q |
262 |
tagactttgtagctgaccaccctttcttgttttttattagagaagatttgtctgctacaatactctttgttggccaagttctcaatcctctt |
353 |
Q |
| |
|
|||||||||| |||| |||||||||||||||| | ||||||||||| ||| ||| ||||| |||||||||| || || ||||||||||| |
|
|
| T |
46491135 |
tagactttgtggctggccaccctttcttgtttatgattagagaagaattgactggaacaatcatctttgttggacaggtgttcaatcctctt |
46491226 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 48 - 131
Target Start/End: Original strand, 46539211 - 46539294
Alignment:
| Q |
48 |
gcttgaactttctaatatgctgaaggagttgggagtgattttacctttctctgatggaggtttaacaaaaatagtagactctcc |
131 |
Q |
| |
|
||||||| |||||||||||| |||||| | ||| || |||||||||||||| | |||||||| |||||||| || |||||||| |
|
|
| T |
46539211 |
gcttgaaacttctaatatgcttaaggagctaggaatggttttacctttctctcaaggaggtttgacaaaaatggtggactctcc |
46539294 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 262 - 353
Target Start/End: Complemental strand, 47413889 - 47413798
Alignment:
| Q |
262 |
tagactttgtagctgaccaccctttcttgttttttattagagaagatttgtctgctacaatactctttgttggccaagttctcaatcctctt |
353 |
Q |
| |
|
||||||||||||| |||||||||||||| ||| | ||||||||||||| | | ||||| ||||||||||| || || |||||||||||| |
|
|
| T |
47413889 |
tagactttgtagccgaccaccctttcttatttctaattagagaagattcaaccgaaacaatcctctttgttggacatgtgctcaatcctctt |
47413798 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 48 - 129
Target Start/End: Original strand, 5160488 - 5160569
Alignment:
| Q |
48 |
gcttgaactttctaatatgctgaaggagttgggagtgattttacctttctctgatggaggtttaacaaaaatagtagactct |
129 |
Q |
| |
|
||||||| |||| |||||||||||||||| ||||||| |||||||||| || || |||||| |||||||| || |||||| |
|
|
| T |
5160488 |
gcttgaaacttctgatatgctgaaggagttaggagtgactttacctttcactcgtgaaggtttgacaaaaatggtggactct |
5160569 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 265 - 353
Target Start/End: Complemental strand, 46526103 - 46526015
Alignment:
| Q |
265 |
actttgtagctgaccaccctttcttgttttttattagagaagatttgtctgctac-aatactctttgttggccaagttctcaatcctctt |
353 |
Q |
| |
|
|||||||||| ||||||| |||||||||| | ||||||||||||||| ||| || ||| ||||||||||| ||||| | |||||||||| |
|
|
| T |
46526103 |
actttgtagcagaccacc-tttcttgtttctaattagagaagatttgactggaacaaatcctctttgttggacaagtacccaatcctctt |
46526015 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 349
Target Start/End: Original strand, 5156673 - 5156761
Alignment:
| Q |
261 |
atagactttgtagctgaccaccctttcttgttttttattagagaagatttgtctgctacaatactctttgttggccaagttctcaatcc |
349 |
Q |
| |
|
||||||||||||||||| ||||||||||| ||| | ||||||||| | | | ||| || || ||||||||||| ||||| |||||||| |
|
|
| T |
5156673 |
atagactttgtagctgatcaccctttcttatttctaattagagaaaactcgactggaaccattctctttgttggacaagtgctcaatcc |
5156761 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 353
Target Start/End: Original strand, 46498380 - 46498468
Alignment:
| Q |
265 |
actttgtagctgaccaccctttcttgttttttattagagaagatttgtctgctacaatactctttgttggccaagttctcaatcctctt |
353 |
Q |
| |
|
||||||||||||||||||| ||||| ||| |||| |||||||||||| | | || || |||||||||| || || |||||||||||| |
|
|
| T |
46498380 |
actttgtagctgaccacccattcttatttattatcagagaagatttgaccggaactatcgtctttgttgggcaggtgctcaatcctctt |
46498468 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 119
Target Start/End: Original strand, 16025694 - 16025769
Alignment:
| Q |
44 |
ttgggcttgaactttctaatatgctgaaggagttgggagtgattttacctttctctgatggaggtttaacaaaaat |
119 |
Q |
| |
|
||||| ||||| |||| |||||||||||||| | ||||| |||||||||||||| ||||||||| |||||||| |
|
|
| T |
16025694 |
ttgggtttgaaacttctgatatgctgaaggagcttggagtagttttacctttctctcctggaggtttgacaaaaat |
16025769 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 350
Target Start/End: Complemental strand, 46548700 - 46548615
Alignment:
| Q |
265 |
actttgtagctgaccaccctttcttgttttttattagagaagatttgtctgctacaatactctttgttggccaagttctcaatcct |
350 |
Q |
| |
|
|||||||||||||||| |||||| ||||| | || | |||||||| |||| || ||||||||| |||| ||||| ||||||||| |
|
|
| T |
46548700 |
actttgtagctgaccatcctttcatgtttatgatcaaagaagattcttctggaactatactctttattggacaagtgctcaatcct |
46548615 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 79 - 131
Target Start/End: Original strand, 5156490 - 5156542
Alignment:
| Q |
79 |
ggagtgattttacctttctctgatggaggtttaacaaaaatagtagactctcc |
131 |
Q |
| |
|
|||||||||||||||||| || ||||||||| |||||||| || |||||||| |
|
|
| T |
5156490 |
ggagtgattttacctttcactcgtggaggtttgacaaaaatggtggactctcc |
5156542 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 48; Significance: 3e-18; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 258 - 353
Target Start/End: Complemental strand, 21463881 - 21463786
Alignment:
| Q |
258 |
ccgatagactttgtagctgaccaccctttcttgttttttattagagaagatttgtctgctacaatactctttgttggccaagttctcaatcctctt |
353 |
Q |
| |
|
|||||| |||| |||||||| ||||||||||||||||| || |||||||||||||| | || ||||||||| |||| ||||| |||||||||||| |
|
|
| T |
21463881 |
ccgataaacttcgtagctgatcaccctttcttgtttttgatcagagaagatttgtccggaaccatactctttattgggcaagtgctcaatcctctt |
21463786 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 44 - 130
Target Start/End: Complemental strand, 9675611 - 9675525
Alignment:
| Q |
44 |
ttgggcttgaactttctaatatgctgaaggagttgggagtgattttacctttctctgatggaggtttaacaaaaatagtagactctc |
130 |
Q |
| |
|
||||||||||| |||| ||| |||||||| | ||||||||||||||||||||| ||||||||| |||||||| || ||||||| |
|
|
| T |
9675611 |
ttgggcttgaaacttctcgaatgatgaaggagctaggagtgattttacctttctcttctggaggtttgacaaaaatggtggactctc |
9675525 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 44 - 130
Target Start/End: Complemental strand, 9692633 - 9692547
Alignment:
| Q |
44 |
ttgggcttgaactttctaatatgctgaaggagttgggagtgattttacctttctctgatggaggtttaacaaaaatagtagactctc |
130 |
Q |
| |
|
||||||||||| |||| |||| ||||||||| ||||||| ||||||||||||| ||||||||| |||||||| || ||||||| |
|
|
| T |
9692633 |
ttgggcttgaaacttctcgtatgacgaaggagttaggagtgagtttacctttctcttctggaggtttgacaaaaatggtggactctc |
9692547 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 44 - 130
Target Start/End: Complemental strand, 21464105 - 21464019
Alignment:
| Q |
44 |
ttgggcttgaactttctaatatgctgaaggagttgggagtgattttacctttctctgatggaggtttaacaaaaatagtagactctc |
130 |
Q |
| |
|
||||||||||| |||| |||||||||| ||| | || ||| |||||||||||||||| |||| ||| |||||||| || ||||||| |
|
|
| T |
21464105 |
ttgggcttgaatgttctgatatgctgaaagagctaggcgtggttttacctttctctgaaggagctttgacaaaaatggtggactctc |
21464019 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 34; Significance: 0.0000000006; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 262 - 311
Target Start/End: Original strand, 35155838 - 35155887
Alignment:
| Q |
262 |
tagactttgtagctgaccaccctttcttgttttttattagagaagatttg |
311 |
Q |
| |
|
|||||||| ||||||| ||||||||||| ||||| ||||||||||||||| |
|
|
| T |
35155838 |
tagactttatagctgatcaccctttcttatttttaattagagaagatttg |
35155887 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 334
Target Start/End: Original strand, 15556438 - 15556510
Alignment:
| Q |
262 |
tagactttgtagctgaccaccctttcttgttttttattagagaagatttgtctgctacaatactctttgttgg |
334 |
Q |
| |
|
|||||||||||||||||||||| ||||| ||| | || |||||||||||| | | ||||| ||||||||||| |
|
|
| T |
15556438 |
tagactttgtagctgaccacccattcttatttctaataagagaagatttgaccggcacaatcctctttgttgg |
15556510 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 128
Target Start/End: Original strand, 35162669 - 35162732
Alignment:
| Q |
65 |
tgctgaaggagttgggagtgattttacctttctctgatggaggtttaacaaaaatagtagactc |
128 |
Q |
| |
|
|||||||||| | ||||||||||||||||||||| ||||||||| |||||||| || ||||| |
|
|
| T |
35162669 |
tgctgaaggatctaggagtgattttacctttctcttctggaggtttgacaaaaatggtggactc |
35162732 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 130
Target Start/End: Original strand, 35155632 - 35155714
Alignment:
| Q |
48 |
gcttgaactttctaatatgctgaaggagttgggagtgattttacctttctctgatggaggtttaacaaaaatagtagactctc |
130 |
Q |
| |
|
||||||| |||| |||||||||| || | ||||||||||||||||||||| ||| ||||| |||||||| || ||||||| |
|
|
| T |
35155632 |
gcttgaatcttctcatatgctgaaagacctaggagtgattttacctttctcttctgggggtttgacaaaaatggtggactctc |
35155714 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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