View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15302_low_4 (Length: 718)

Name: NF15302_low_4
Description: NF15302
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15302_low_4
NF15302_low_4
[»] chr5 (38 HSPs)
chr5 (1-700)||(15402427-15403123)
chr5 (63-183)||(15400879-15400999)
chr5 (50-149)||(41377811-41377910)
chr5 (53-149)||(43281128-43281224)
chr5 (381-474)||(17368675-17368768)
chr5 (393-534)||(18704026-18704166)
chr5 (401-526)||(37526197-37526322)
chr5 (401-526)||(37588358-37588483)
chr5 (400-488)||(19138714-19138804)
chr5 (401-526)||(37690634-37690760)
chr5 (381-534)||(12459979-12460131)
chr5 (381-514)||(14295465-14295598)
chr5 (409-477)||(41534437-41534505)
chr5 (380-514)||(15003491-15003625)
chr5 (393-435)||(16457603-16457645)
chr5 (381-467)||(37611193-37611279)
chr5 (381-467)||(37787923-37788009)
chr5 (393-510)||(10272421-10272538)
chr5 (413-534)||(16889674-16889795)
chr5 (400-514)||(32194076-32194192)
chr5 (406-470)||(32059362-32059426)
chr5 (400-476)||(33533536-33533612)
chr5 (382-477)||(6587086-6587181)
chr5 (449-508)||(32059635-32059694)
chr5 (386-473)||(41957434-41957521)
chr5 (381-435)||(499709-499763)
chr5 (400-514)||(4855657-4855771)
chr5 (392-514)||(34690833-34690954)
chr5 (456-534)||(36539685-36539763)
chr5 (381-463)||(38104835-38104917)
chr5 (382-511)||(7674610-7674739)
chr5 (381-434)||(10125696-10125749)
chr5 (381-434)||(11707094-11707147)
chr5 (413-510)||(12425534-12425631)
chr5 (400-473)||(18543194-18543266)
chr5 (451-534)||(26209461-26209543)
chr5 (381-514)||(36639481-36639614)
chr5 (386-435)||(37794681-37794730)
[»] chr2 (38 HSPs)
chr2 (53-144)||(42975800-42975891)
chr2 (381-534)||(29316753-29316906)
chr2 (395-511)||(33942112-33942228)
chr2 (405-513)||(22681187-22681295)
chr2 (421-513)||(11513858-11513950)
chr2 (456-514)||(20258454-20258512)
chr2 (381-477)||(35485913-35486009)
chr2 (382-434)||(44606089-44606141)
chr2 (451-534)||(10143111-10143194)
chr2 (386-472)||(40279268-40279355)
chr2 (386-472)||(40279338-40279425)
chr2 (391-477)||(33931558-33931644)
chr2 (383-477)||(40158714-40158808)
chr2 (380-470)||(43065427-43065517)
chr2 (382-459)||(1647250-1647327)
chr2 (386-511)||(10285823-10285947)
chr2 (391-508)||(28039320-28039437)
chr2 (400-476)||(16867736-16867812)
chr2 (381-453)||(28677637-28677709)
chr2 (451-527)||(28803554-28803630)
chr2 (386-473)||(40279197-40279285)
chr2 (393-476)||(32821806-32821889)
chr2 (391-429)||(1056117-1056155)
chr2 (407-473)||(1625900-1625966)
chr2 (451-509)||(5043608-5043666)
chr2 (392-534)||(5133711-5133853)
chr2 (400-434)||(10567096-10567130)
chr2 (381-427)||(32614926-32614972)
chr2 (381-435)||(39621989-39622043)
chr2 (393-435)||(41809235-41809277)
chr2 (380-429)||(787376-787425)
chr2 (381-466)||(8017441-8017526)
chr2 (408-477)||(29628748-29628817)
chr2 (393-434)||(30538163-30538204)
chr2 (381-514)||(33256699-33256832)
chr2 (381-466)||(35378994-35379079)
chr2 (400-429)||(43910996-43911025)
chr2 (381-430)||(44269009-44269058)
[»] chr4 (28 HSPs)
chr4 (400-514)||(24929452-24929566)
chr4 (412-527)||(49219085-49219200)
chr4 (401-527)||(46415790-46415916)
chr4 (381-514)||(2996532-2996665)
chr4 (391-514)||(8469365-8469488)
chr4 (407-532)||(17884009-17884134)
chr4 (391-534)||(23819029-23819171)
chr4 (381-474)||(1137711-1137804)
chr4 (400-477)||(42685420-42685497)
chr4 (385-475)||(46110201-46110291)
chr4 (456-514)||(53626735-53626793)
chr4 (456-514)||(55870394-55870452)
chr4 (56-149)||(10601679-10601772)
chr4 (401-514)||(30207569-30207681)
chr4 (381-470)||(33534147-33534236)
chr4 (400-477)||(42121484-42121560)
chr4 (381-510)||(44319912-44320041)
chr4 (402-477)||(7694009-7694084)
chr4 (459-522)||(18630631-18630694)
chr4 (408-507)||(31038872-31038971)
chr4 (400-439)||(46201382-46201421)
chr4 (55-149)||(55911185-55911279)
chr4 (392-474)||(6466035-6466117)
chr4 (412-514)||(11802493-11802595)
chr4 (382-511)||(52315175-52315305)
chr4 (415-532)||(18628555-18628672)
chr4 (461-510)||(25434518-25434567)
chr4 (381-426)||(37863932-37863977)
[»] chr1 (57 HSPs)
chr1 (393-514)||(30371107-30371228)
chr1 (50-149)||(50204523-50204622)
chr1 (382-533)||(37842334-37842485)
chr1 (400-510)||(30257646-30257756)
chr1 (393-534)||(29007706-29007847)
chr1 (386-514)||(25479540-25479668)
chr1 (391-510)||(7218062-7218181)
chr1 (400-527)||(10199405-10199532)
chr1 (400-534)||(16981933-16982067)
chr1 (381-513)||(31517718-31517850)
chr1 (407-466)||(28077073-28077132)
chr1 (405-479)||(15558211-15558285)
chr1 (381-474)||(10744300-10744393)
chr1 (400-485)||(27963367-27963452)
chr1 (381-487)||(28689430-28689538)
chr1 (400-477)||(34290232-34290309)
chr1 (393-468)||(3070080-3070156)
chr1 (381-429)||(4549892-4549940)
chr1 (406-486)||(23902070-23902150)
chr1 (98-149)||(43866283-43866334)
chr1 (456-527)||(49517016-49517087)
chr1 (385-439)||(4699597-4699651)
chr1 (456-510)||(5592738-5592792)
chr1 (400-474)||(7136995-7137069)
chr1 (464-534)||(15360833-15360903)
chr1 (381-466)||(15942725-15942811)
chr1 (393-511)||(16322811-16322929)
chr1 (400-534)||(17269189-17269323)
chr1 (451-513)||(27738228-27738290)
chr1 (400-477)||(3224419-3224496)
chr1 (443-512)||(5421960-5422029)
chr1 (400-473)||(12564496-12564569)
chr1 (400-477)||(27887115-27887192)
chr1 (381-434)||(29635386-29635439)
chr1 (401-477)||(14629964-14630040)
chr1 (386-510)||(17420166-17420290)
chr1 (384-444)||(31118072-31118132)
chr1 (53-149)||(33966642-33966738)
chr1 (437-477)||(37295752-37295792)
chr1 (381-429)||(38001640-38001688)
chr1 (381-429)||(38170668-38170716)
chr1 (400-475)||(12287189-12287264)
chr1 (400-439)||(34278690-34278729)
chr1 (382-429)||(42757156-42757203)
chr1 (469-520)||(49365825-49365876)
chr1 (393-435)||(3223705-3223747)
chr1 (400-434)||(5886991-5887025)
chr1 (395-477)||(10809341-10809423)
chr1 (456-514)||(28467360-28467418)
chr1 (460-534)||(36151562-36151636)
chr1 (381-434)||(4481969-4482022)
chr1 (400-473)||(6292493-6292566)
chr1 (451-504)||(25006082-25006135)
chr1 (456-513)||(33527200-33527257)
chr1 (407-476)||(35351036-35351105)
chr1 (451-511)||(44940305-44940363)
chr1 (441-510)||(49888730-49888799)
[»] chr7 (32 HSPs)
chr7 (53-149)||(32368114-32368210)
chr7 (405-513)||(38010674-38010782)
chr7 (53-149)||(23636693-23636789)
chr7 (381-527)||(30535509-30535655)
chr7 (400-514)||(44151477-44151591)
chr7 (393-534)||(48157110-48157251)
chr7 (381-473)||(19719007-19719098)
chr7 (407-474)||(2825235-2825302)
chr7 (379-488)||(46082019-46082130)
chr7 (403-474)||(47559601-47559672)
chr7 (456-514)||(1417223-1417281)
chr7 (393-435)||(9423584-9423626)
chr7 (403-509)||(24363601-24363707)
chr7 (413-527)||(27548209-27548323)
chr7 (393-466)||(7244687-7244760)
chr7 (402-534)||(3610739-3610871)
chr7 (381-488)||(19022562-19022670)
chr7 (391-435)||(20888382-20888426)
chr7 (384-488)||(25670567-25670671)
chr7 (381-429)||(36537952-36538000)
chr7 (381-476)||(39967917-39968013)
chr7 (53-141)||(46082472-46082560)
chr7 (382-429)||(11048071-11048118)
chr7 (400-439)||(35267396-35267435)
chr7 (456-514)||(5006562-5006620)
chr7 (456-514)||(9527143-9527201)
chr7 (386-508)||(12110325-12110447)
chr7 (382-424)||(15740390-15740432)
chr7 (451-513)||(30456498-30456560)
chr7 (382-467)||(34035923-34036009)
chr7 (404-477)||(20553099-20553172)
chr7 (386-439)||(45859510-45859562)
[»] chr8 (32 HSPs)
chr8 (6-149)||(36881520-36881662)
chr8 (382-426)||(779040-779084)
chr8 (382-440)||(3254258-3254316)
chr8 (387-508)||(2594981-2595102)
chr8 (381-508)||(2482830-2482955)
chr8 (401-477)||(28769337-28769413)
chr8 (382-474)||(41442432-41442524)
chr8 (381-477)||(43504747-43504843)
chr8 (380-470)||(9572872-9572963)
chr8 (402-477)||(30389095-30389170)
chr8 (381-534)||(10114429-10114582)
chr8 (381-434)||(32840963-32841017)
chr8 (412-534)||(38874585-38874707)
chr8 (456-534)||(42597340-42597418)
chr8 (381-426)||(8629503-8629548)
chr8 (408-473)||(9956819-9956884)
chr8 (451-512)||(34770853-34770914)
chr8 (117-149)||(1468979-1469011)
chr8 (381-473)||(8060669-8060761)
chr8 (451-527)||(29973027-29973103)
chr8 (387-527)||(31862439-31862579)
chr8 (451-534)||(35298525-35298609)
chr8 (388-448)||(41606888-41606948)
chr8 (391-534)||(9699940-9700083)
chr8 (381-439)||(14949900-14949958)
chr8 (451-533)||(31884534-31884616)
chr8 (457-514)||(39866790-39866848)
chr8 (451-532)||(1470904-1470985)
chr8 (381-470)||(7918424-7918513)
chr8 (412-477)||(8062325-8062390)
chr8 (381-506)||(11376670-11376795)
chr8 (393-434)||(41620281-41620322)
[»] chr6 (32 HSPs)
chr6 (393-514)||(9667975-9668096)
chr6 (53-148)||(25101031-25101126)
chr6 (393-474)||(2112199-2112280)
chr6 (400-514)||(281845-281959)
chr6 (53-148)||(6539490-6539585)
chr6 (400-511)||(25100005-25100116)
chr6 (393-471)||(4420645-4420723)
chr6 (423-528)||(1402941-1403046)
chr6 (400-511)||(7785741-7785850)
chr6 (381-473)||(20368158-20368250)
chr6 (382-477)||(31624086-31624181)
chr6 (111-149)||(18133896-18133934)
chr6 (386-435)||(7931709-7931758)
chr6 (393-514)||(30523619-30523739)
chr6 (386-439)||(30863280-30863333)
chr6 (381-434)||(33832251-33832304)
chr6 (451-527)||(4006660-4006736)
chr6 (393-489)||(4246394-4246490)
chr6 (400-439)||(821459-821498)
chr6 (400-435)||(6536985-6537020)
chr6 (402-477)||(10476121-10476195)
chr6 (451-534)||(32975917-32976000)
chr6 (381-472)||(34403856-34403947)
chr6 (382-424)||(1575944-1575986)
chr6 (456-510)||(3204595-3204649)
chr6 (391-437)||(4080952-4080998)
chr6 (400-466)||(6647394-6647460)
chr6 (111-149)||(23890008-23890046)
chr6 (456-534)||(29274282-29274360)
chr6 (408-477)||(9109256-9109325)
chr6 (381-426)||(10657449-10657494)
chr6 (391-436)||(22743518-22743563)
[»] scaffold0024 (1 HSPs)
scaffold0024 (400-534)||(27515-27649)
[»] chr3 (42 HSPs)
chr3 (400-514)||(52440659-52440773)
chr3 (401-474)||(33883748-33883821)
chr3 (53-148)||(7227137-7227232)
chr3 (451-534)||(40122801-40122883)
chr3 (400-510)||(12923322-12923432)
chr3 (381-473)||(21367667-21367760)
chr3 (413-534)||(27792811-27792932)
chr3 (380-429)||(30573891-30573940)
chr3 (393-466)||(37273141-37273214)
chr3 (381-505)||(19679306-19679430)
chr3 (400-512)||(36646379-36646491)
chr3 (393-477)||(43115052-43115136)
chr3 (381-487)||(14548699-14548805)
chr3 (54-148)||(50063918-50064012)
chr3 (381-510)||(1816546-1816675)
chr3 (380-473)||(36887504-36887597)
chr3 (449-534)||(37788800-37788884)
chr3 (398-511)||(38462243-38462356)
chr3 (400-473)||(39602207-39602280)
chr3 (458-535)||(48364934-48365011)
chr3 (381-469)||(1809981-1810069)
chr3 (431-527)||(10101504-10101600)
chr3 (431-527)||(10212429-10212525)
chr3 (381-477)||(40880926-40881022)
chr3 (381-488)||(50952317-50952425)
chr3 (402-473)||(40665429-40665500)
chr3 (400-435)||(45432936-45432971)
chr3 (400-514)||(20192603-20192717)
chr3 (400-466)||(30923895-30923961)
chr3 (393-435)||(36200134-36200176)
chr3 (384-434)||(41724251-41724301)
chr3 (393-435)||(42745076-42745118)
chr3 (382-424)||(47249465-47249507)
chr3 (400-466)||(54180777-54180843)
chr3 (403-488)||(22214659-22214744)
chr3 (393-466)||(31010409-31010482)
chr3 (381-473)||(34610783-34610876)
chr3 (400-429)||(44747171-44747200)
chr3 (382-427)||(45541617-45541662)
chr3 (448-477)||(47217353-47217382)
chr3 (385-426)||(47513700-47513741)
chr3 (382-471)||(54837013-54837102)
[»] scaffold0508 (1 HSPs)
scaffold0508 (451-534)||(9823-9906)
[»] scaffold0608 (1 HSPs)
scaffold0608 (381-434)||(9615-9668)
[»] scaffold0147 (1 HSPs)
scaffold0147 (380-429)||(12681-12730)


Alignment Details
Target: chr5 (Bit Score: 662; Significance: 0; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 662; E-Value: 0
Query Start/End: Original strand, 1 - 700
Target Start/End: Original strand, 15402427 - 15403123
Alignment:
Q  1 caaacaaaacagagaaaatagagtaagaacagatgaaacaaaggagaatcaaagcaaaaacgaacctgagtaaagtcgaagtacgattgagatgccatgg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15402427 caaacaaaacagagaaaatagagtaagaacagatgaaacaaaggagaatcaaagcaaaaacgaacctgagtaaagtcgaagtacgattgagatgccatgg 15402526  T
Q  101 gacataggaccgtacaatcctacgaaccagcactcgatcctgactacaaaccagcctcagtttgtgagataaggcgtgattgttgtagttgttgtcggat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15402527 gacataggaccgtacaatcctacgaaccagcactcgatcctgactacaaaccagcctcagtttgtgagataaggcgtgattgttgtagttgttgtcggat 15402626  T
Q  201 ccatttgatagcgtgagttataaaagaatatcttgtccttaaaaagatatgcttatagctctactgatatttcctgattgcaatgtaaacagaaaacatg 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15402627 ccatttgatagcgtgagttataaaagaatatcttgtccttaaaaagatatgcttatagctctactgatatttcctgattgcaatgtaaacagaaaacatg 15402726  T
Q  301 ctttaatttaccaatggtacgtgtgaattaagttatttgagcttatctatcggcaaagatacttgcaagattgtatatatgagaacttacgaaaacaaat 400  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15402727 ctttaatttaccaatggtatgtgtgaattgagttatttgagcttatctatctgcaaagatacttgcaagattgtatatatgagaacttacgaaaacaaat 15402826  T
Q  401 tatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttttgaaaacatttcgactctat 500  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15402827 tatgatatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttttgaaaacatttcgactctat 15402926  T
Q  501 tttatcttttgttaatgaaataacttaaacataatacatatgttatgttataagtgtttatccaaacaaggataactcttgttgagttttgctttaggtt 600  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  15402927 tttatcttttgttaatgaaataacttaaacataatacatatgttatgttataagtgtttatccaaacaaggataactcttgttgaattttgctttaggtt 15403026  T
Q  601 tgagtttgaccaagtttctgtgtgatcttcaacatattattattcagaaaaggtaaacttttcttcatctaactcacaaaattcaaaatgctgaaggttc 700  Q
    ||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  15403027 tgagtttgaccaagtttctgtgtgatcttcaaca---tattattcagaaaaggtaaacttttcttcatctaactcagaaaattcaaaatgctgaaggttc 15403123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 63 - 183
Target Start/End: Original strand, 15400879 - 15400999
Alignment:
Q  63 aacctgagtaaagtcgaagtacgattgagatgccatgggacataggaccgtacaatcctacgaaccagcactcgatcctgactacaaaccagcctcagtt 162  Q
    ||||||||||||||||||||||||||||| ||||  ||||| ||||| |||||  ||||||||||||||||||||| |||| ||||| ||| ||||||||    
T  15400879 aacctgagtaaagtcgaagtacgattgaggtgccgcgggacgtaggatcgtacggtcctacgaaccagcactcgattctgattacaagccaacctcagtt 15400978  T
Q  163 tgtgagataaggcgtgattgt 183  Q
    ||||||||||||  |||||||    
T  15400979 tgtgagataaggtatgattgt 15400999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 50 - 149
Target Start/End: Original strand, 41377811 - 41377910
Alignment:
Q  50 caaagcaaaaacgaacctgagtaaagtcgaagtacgattgagatgccatgggacataggaccgtacaatcctacgaaccagcactcgatcctgactacaa 149  Q
    ||||||| |||||||||||||||||||||||| ||||||||| |||| |||||  ||||| ||||| ||||||| ||||||| ||| |||||||||||||    
T  41377811 caaagcagaaacgaacctgagtaaagtcgaagcacgattgaggtgccgtgggaagtaggatcgtacgatcctacaaaccagctctcaatcctgactacaa 41377910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 53 - 149
Target Start/End: Original strand, 43281128 - 43281224
Alignment:
Q  53 agcaaaaacgaacctgagtaaagtcgaagtacgattgagatgccatgggacataggaccgtacaatcctacgaaccagcactcgatcctgactacaa 149  Q
    ||||||||||||||||||||||||||||| | ||||||| |||| |||||  ||| | ||||| |||||| ||||||||||  ||||||||||||||    
T  43281128 agcaaaaacgaacctgagtaaagtcgaagcatgattgaggtgccgtgggatgtagaatcgtacgatcctatgaaccagcacgagatcctgactacaa 43281224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 381 - 474
Target Start/End: Complemental strand, 17368768 - 17368675
Alignment:
Q  381 gagaacttacgaaaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatag 474  Q
    ||||||||| |||||||| |||||||||||||||| |  |||||||||| ||||| |||   |||| || |||| |||||||||||||||||||    
T  17368768 gagaacttatgaaaacaacttatgacatgttcatatgcagttttcagcttatttccataacctctccaagatagcttatgaaaacaacttatag 17368675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 393 - 534
Target Start/End: Original strand, 18704026 - 18704166
Alignment:
Q  393 aaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttttgaaaacatttc 492  Q
    |||||| |||| ||||||  ||||||||||||||||| ||||| ||| | ||| |  ||||| |||||||||||||||||||||| | | |||| |  |     
T  18704026 aaacaacttataacatgtctataagttgttttcagcttatttccataagatctttgtaatagcttatgaaaacaacttatagcttatataaaaatagctt 18704125  T
Q  493 gactctattttatcttttgttaatgaaataacttaaacataa 534  Q
    |||| || ||||||||||||||  ||||||||||| ||||||    
T  18704126 gacttta-tttatcttttgttatagaaataacttatacataa 18704166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 401 - 526
Target Start/End: Original strand, 37526197 - 37526322
Alignment:
Q  401 tatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttttgaaaacatttcgactctat 500  Q
    ||||||||||| ||||| ||||||||||| ||||| ||| | |||| | || |  |||||||||||||||||||||| | ||||||| ||| || |  ||    
T  37526197 tatgacatgttaataagctgttttcagcttatttccataagctctccagaacaacttatgaaaacaacttatagcttatatgaaaactttttgatttgat 37526296  T
Q  501 tttatcttttgttaatgaaataactt 526  Q
    |||||||||| |||  ||||||||||    
T  37526297 tttatcttttattatagaaataactt 37526322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 401 - 526
Target Start/End: Original strand, 37588358 - 37588483
Alignment:
Q  401 tatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttttgaaaacatttcgactctat 500  Q
    ||||| ||||| ||||| ||||||||||| ||||| ||| | |||| | ||||  |||||||||||||||||||||| | ||||||| ||| || |  ||    
T  37588358 tatgaaatgttaataagctgttttcagcttatttccataagctctccagaataacttatgaaaacaacttatagcttatatgaaaactttttgatttgat 37588457  T
Q  501 tttatcttttgttaatgaaataactt 526  Q
    |||||||||| |||  ||||||||||    
T  37588458 tttatcttttattatagaaataactt 37588483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 400 - 488
Target Start/End: Original strand, 19138714 - 19138804
Alignment:
Q  400 ttatgacatgttcataagttgttttcagctaatttctatacgttctc--taaaataggttatgaaaacaacttatagcttttttgaaaaca 488  Q
    ||||||||||| ||||| |||||||||||| ||||| ||| | ||||  || ||||| |||||||||||||||||||||| | ||||||||    
T  19138714 ttatgacatgtacataaattgttttcagcttatttccataagctctccatataatagcttatgaaaacaacttatagcttatctgaaaaca 19138804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 401 - 526
Target Start/End: Original strand, 37690634 - 37690760
Alignment:
Q  401 tatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggtt-atgaaaacaacttatagcttttttgaaaacatttcgactcta 499  Q
    ||||||||||| ||||| ||||||||||| ||||| ||| | |||| | ||||  || |||||||||||||||||||| | ||||||| ||| || |  |    
T  37690634 tatgacatgttaataagctgttttcagcttatttccataagctctccataataactttatgaaaacaacttatagcttatatgaaaactttttgatttga 37690733  T
Q  500 ttttatcttttgttaatgaaataactt 526  Q
    ||||||||||| |||  ||||||||||    
T  37690734 ttttatcttttattatagaaataactt 37690760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 381 - 534
Target Start/End: Original strand, 12459979 - 12460131
Alignment:
Q  381 gagaacttacgaaaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttt 480  Q
    |||||| || |||||||| |||||||||||||||| ||||||||  ||| ||||  ||| | |||  || |||| || |||| ||||||||||| || ||    
T  12459979 gagaacctatgaaaacaacttatgacatgttcatatgttgtttttggcttattttcataagctctgcaagatagcttgtgaagacaacttatagtttatt 12460078  T
Q  481 tgaaaacatttcgactctattttatcttttgttaatgaaataacttaaacataa 534  Q
    |||||||| |   ||| |||||||||||||||||  |||||| |||| ||||||    
T  12460079 tgaaaacaatataact-tattttatcttttgttatagaaatagcttatacataa 12460131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 381 - 514
Target Start/End: Complemental strand, 14295598 - 14295465
Alignment:
Q  381 gagaacttacgaaaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttt 480  Q
    |||| |||| |||||||  |||||| ||||  ||||| ||||||||||| | ||||| | | |||| |  |||| ||| ||||||| |||||||||| |     
T  14295598 gagagcttatgaaaacagcttatgatatgtcgataagctgttttcagcttacttctaaaagctctccaggatagcttacgaaaacagcttatagcttata 14295499  T
Q  481 tgaaaacatttcgactctattttatcttttgtta 514  Q
    |||||||| || |||| |||||||||||||||||    
T  14295498 tgaaaacagtttgactttattttatcttttgtta 14295465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 409 - 477
Target Start/End: Complemental strand, 41534505 - 41534437
Alignment:
Q  409 gttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagctt 477  Q
    ||||||||| ||||||||| | ||||||  | |||||| ||||||| ||||||||||||||||||||||    
T  41534505 gttcataagctgttttcagattatttcttcaagttctcaaaaatagcttatgaaaacaacttatagctt 41534437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 380 - 514
Target Start/End: Original strand, 15003491 - 15003625
Alignment:
Q  380 tgagaacttacgaaaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagctttt 479  Q
    |||||||||| | |||||| ||| ||||||||| ||||||||||||   | ||||| ||| | |||||   |||| |||||||||| ||||||||||| |    
T  15003491 tgagaacttaaggaaacaacttacgacatgttcgtaagttgttttcgatttatttccataagctctcttggatagcttatgaaaaccacttatagcttat 15003590  T
Q  480 ttgaaaacatttcgactctattttatcttttgtta 514  Q
     |||| | | || || | |||||||||||||||||    
T  15003591 atgaagagagtttgattttattttatcttttgtta 15003625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 393 - 435
Target Start/End: Original strand, 16457603 - 16457645
Alignment:
Q  393 aaacaaattatgacatgttcataagttgttttcagctaatttc 435  Q
    ||||||||| ||||||||||||||||||||||||||| |||||    
T  16457603 aaacaaattgtgacatgttcataagttgttttcagcttatttc 16457645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 381 - 467
Target Start/End: Original strand, 37611193 - 37611279
Alignment:
Q  381 gagaacttacgaaaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaa 467  Q
    |||| |||| |||||||| || ||||||||||||||| ||||||||| | ||||| ||| | |||| || |||| ||||||||||||    
T  37611193 gagagcttatgaaaacaacttgtgacatgttcataagctgttttcaggttatttccataagctctccaagatagcttatgaaaacaa 37611279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 381 - 467
Target Start/End: Original strand, 37787923 - 37788009
Alignment:
Q  381 gagaacttacgaaaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaa 467  Q
    |||| |||| |||||||| || ||||||||||||||| ||||||||| | ||||| ||| | |||| || |||| ||||||||||||    
T  37787923 gagagcttatgaaaacaacttgtgacatgttcataagctgttttcaggttatttccataagctctccaagatagcttatgaaaacaa 37788009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 393 - 510
Target Start/End: Original strand, 10272421 - 10272538
Alignment:
Q  393 aaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttttgaaaacatttc 492  Q
    |||||| |||||||||||   |||||||||||||||| ||||  |||   |||| || || | |||||||||||||||||||||| |  ||||||| ||     
T  10272421 aaacaacttatgacatgtctgtaagttgttttcagcttattttcataaactctccaagatggcttatgaaaacaacttatagcttatacgaaaacaattt 10272520  T
Q  493 gactctattttatctttt 510  Q
    ||||  ||||||||||||    
T  10272521 gacttaattttatctttt 10272538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 413 - 534
Target Start/End: Complemental strand, 16889795 - 16889674
Alignment:
Q  413 ataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttttgaaaacatttcgactctattttatcttttgt 512  Q
    ||||||||||||||| | ||||| |||   ||||||  |||| ||||||||||| |||||||||| | | |||||| || ||||  | ||||||||||||    
T  16889795 ataagttgttttcagattatttccataaactctctagcatagcttatgaaaacagcttatagcttctataaaaacagtttgacttaagtttatcttttgt 16889696  T
Q  513 taatgaaataacttaaacataa 534  Q
    ||  |||||| |||| ||||||    
T  16889695 tatggaaatagcttatacataa 16889674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 400 - 514
Target Start/End: Original strand, 32194076 - 32194192
Alignment:
Q  400 ttatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagct--tttttgaaaacatttcgactc 497  Q
    ||||||||| | |||||||||||||||||| |||| |||| | |||| || |||| |||  |||||| |||||||||  | | ||||||||| | ||||     
T  32194076 ttatgacatttccataagttgttttcagcttatttatataagctctcaaagatagcttaaaaaaacatcttatagcttatatatgaaaacatcttgactt 32194175  T
Q  498 tattttatcttttgtta 514  Q
    |||||||| ||||||||    
T  32194176 tattttatattttgtta 32194192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 406 - 470
Target Start/End: Original strand, 32059362 - 32059426
Alignment:
Q  406 catgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaactt 470  Q
    ||||||||| |||||||||||||| ||||| ||| ||||||||  |||| ||||||||| |||||    
T  32059362 catgttcatgagttgttttcagcttatttcgataagttctctaggatagcttatgaaaagaactt 32059426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 400 - 476
Target Start/End: Original strand, 33533536 - 33533612
Alignment:
Q  400 ttatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagct 476  Q
    ||||||||| ||||||||||||||||| || ||||| ||| | |||| || |||| || |||||||| |||||||||    
T  33533536 ttatgacatattcataagttgttttcaacttatttccataagctctccaagatagcttgtgaaaacaccttatagct 33533612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 382 - 477
Target Start/End: Original strand, 6587086 - 6587181
Alignment:
Q  382 agaacttacgaaaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagctt 477  Q
    ||||||||  ||||||  |||||||| ||||||||| ||||| ||||| ||||  | | |||||| |  |||| ||||||||||||||||||||||    
T  6587086 agaacttaaaaaaacagcttatgacaggttcataagctgtttacagcttattttcacaagttctccactatagcttatgaaaacaacttatagctt 6587181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 449 - 508
Target Start/End: Original strand, 32059635 - 32059694
Alignment:
Q  449 aaataggttatgaaaacaacttatagcttttttgaaaacatttcgactctattttatctt 508  Q
    |||| ||||||||||||| |||||||||| | |||||||| || |||| |||||||||||    
T  32059635 aaatgggttatgaaaacagcttatagcttatatgaaaacagtttgactttattttatctt 32059694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 386 - 473
Target Start/End: Original strand, 41957434 - 41957521
Alignment:
Q  386 cttacgaaaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttata 473  Q
    |||||| |||||  ||||||||||| ||||||||||||||| || ||||  ||| |||||| |  |||| ||||||||||| ||||||    
T  41957434 cttacggaaacagcttatgacatgtccataagttgttttcatcttattttcataagttctcaaggatagcttatgaaaacagcttata 41957521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 381 - 435
Target Start/End: Original strand, 499709 - 499763
Alignment:
Q  381 gagaacttacgaaaacaaattatgacatgttcataagttgttttcagctaatttc 435  Q
    ||||||||| |||||||  |||||||||||| | ||||||||||||||| |||||    
T  499709 gagaacttatgaaaacagcttatgacatgttaacaagttgttttcagcttatttc 499763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 400 - 514
Target Start/End: Complemental strand, 4855771 - 4855657
Alignment:
Q  400 ttatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttttgaaaacatttcgactcta 499  Q
    |||||||||||||| ||| ||||||| ||| |||||| || | ||| |   |||| |||||||||||||||||| ||| | ||| |||| ||  ||| ||    
T  4855771 ttatgacatgttcagaagctgttttcggcttatttctgtaagctctttgggatagtttatgaaaacaacttataacttatatgataacaatttaacttta 4855672  T
Q  500 ttttatcttttgtta 514  Q
    |||||| ||||||||    
T  4855671 ttttattttttgtta 4855657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 392 - 514
Target Start/End: Complemental strand, 34690954 - 34690833
Alignment:
Q  392 aaaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttttgaaaacattt 491  Q
    |||||||||| |||||||| ||||||||||| ||  || ||||| ||| | |||| || || | |||||| |||||||||||||| | | ||||  |||     
T  34690954 aaaacaaattgtgacatgtccataagttgttatcgacttatttccataagctctccaagatggcttatgagaacaacttatagctatat-gaaagtattg 34690856  T
Q  492 cgactctattttatcttttgtta 514  Q
     |||| |||||||||||||||||    
T  34690855 tgactttattttatcttttgtta 34690833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 456 - 534
Target Start/End: Complemental strand, 36539763 - 36539685
Alignment:
Q  456 ttatgaaaacaacttatagcttttttgaaaacatttcgactctattttatcttttgttaatgaaataacttaaacataa 534  Q
    |||| ||||||||||||||||| | ||||||||  | |||| |||||||||||||| |||  ||||| |||| ||||||    
T  36539763 ttataaaaacaacttatagcttatatgaaaacaggttgactttattttatcttttgataaacaaatagcttacacataa 36539685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 381 - 463
Target Start/End: Original strand, 38104835 - 38104917
Alignment:
Q  381 gagaacttacgaaaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaa 463  Q
    |||||||||| ||||||   |||||| || | ||||||||||||||||| ||||| ||| | ||||||| |||| ||||||||    
T  38104835 gagaacttacaaaaacaggctatgacttgcttataagttgttttcagcttatttccataagctctctaagatagcttatgaaa 38104917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 382 - 511
Target Start/End: Complemental strand, 7674739 - 7674610
Alignment:
Q  382 agaacttacgaaaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagctttttt 481  Q
    |||||||| | |||||| |||||||||||| ||||| ||||||||||| ||||  | |  ||||| || |||| |||||||||||  |||| |||| |      
T  7674739 agaacttatggaaacaacttatgacatgtttataaggtgttttcagcttattttcacaaattctccaagatagcttatgaaaacattttatggcttataa 7674640  T
Q  482 gaaaacatttcgactctattttatcttttg 511  Q
    ||||||| ||  | | ||||||||||||||    
T  7674639 gaaaacaatttaaatttattttatcttttg 7674610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 381 - 434
Target Start/End: Original strand, 10125696 - 10125749
Alignment:
Q  381 gagaacttacgaaaacaaattatgacatgttcataagttgttttcagctaattt 434  Q
    ||||||||| | |||||| |||||||||||| ||||| ||||||||||| ||||    
T  10125696 gagaacttatgtaaacaacttatgacatgttgataaggtgttttcagcttattt 10125749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 381 - 434
Target Start/End: Complemental strand, 11707147 - 11707094
Alignment:
Q  381 gagaacttacgaaaacaaattatgacatgttcataagttgttttcagctaattt 434  Q
    |||||||||  |||| | ||||||||||||| ||||||||||||||||| ||||    
T  11707147 gagaacttatcaaaatagattatgacatgtttataagttgttttcagcttattt 11707094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 413 - 510
Target Start/End: Complemental strand, 12425631 - 12425534
Alignment:
Q  413 ataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttttgaaaacatttcgactctattttatctttt 510  Q
    |||||||||||||| || ||||  ||| |||||| || |||| || |||||||| |||||||||| |  ||||||| ||  ||| |||||||||||||    
T  12425631 ataagttgttttcaacttattttcataagttctccaagatagcttgtgaaaacagcttatagcttatacgaaaacaatttaactttattttatctttt 12425534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 400 - 473
Target Start/End: Original strand, 18543194 - 18543266
Alignment:
Q  400 ttatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttata 473  Q
    ||||||||||| ||| |||||||||||||| ||||| ||| | |||| |  |||| ||||||||||||||||||    
T  18543194 ttatgacatgtccatgagttgttttcagcttatttc-ataagctctccaggatagcttatgaaaacaacttata 18543266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 451 - 534
Target Start/End: Original strand, 26209461 - 26209543
Alignment:
Q  451 ataggttatgaaaacaacttatagctt-ttttgaaaacatttcgactctattttatcttttgttaatgaaataacttaaacataa 534  Q
    |||| ||||||||||| |||||||||| | ||||||||| || |||| |||||||||  ||||||  ||||||||||| ||||||    
T  26209461 atagcttatgaaaacagcttatagcttatattgaaaacaattggactttattttatc--ttgttatagaaataacttatacataa 26209543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 381 - 514
Target Start/End: Complemental strand, 36639614 - 36639481
Alignment:
Q  381 gagaacttacgaaaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttt 480  Q
    |||||||||||||||    ||||||| ||| ||||||||||||||  || ||||  ||| | |||  || |||| |||||||||||   |||| ||| |     
T  36639614 gagaacttacgaaaattgcttatgacgtgtccataagttgttttcctcttattttcataagctcttcaagatagcttatgaaaacagtctataacttgta 36639515  T
Q  481 tgaaaacatttcgactctattttatcttttgtta 514  Q
    ||||||||||| || | |||||||||||||||||    
T  36639514 tgaaaacattttgattttattttatcttttgtta 36639481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 386 - 435
Target Start/End: Original strand, 37794681 - 37794730
Alignment:
Q  386 cttacgaaaacaaattatgacatgttcataagttgttttcagctaatttc 435  Q
    |||| |||||||| |||||||||||||||||| |||||| |||| |||||    
T  37794681 cttatgaaaacaacttatgacatgttcataagctgttttgagcttatttc 37794730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 3e-25; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 53 - 144
Target Start/End: Original strand, 42975800 - 42975891
Alignment:
Q  53 agcaaaaacgaacctgagtaaagtcgaagtacgattgagatgccatgggacataggaccgtacaatcctacgaaccagcactcgatcctgac 144  Q
    |||||||||||| ||||||||||| ||||||||||||||||||| |||||| ||||| ||||| |||||||||||||| |||| ||||||||    
T  42975800 agcaaaaacgaagctgagtaaagttgaagtacgattgagatgccgtgggacgtaggatcgtacgatcctacgaaccagaactctatcctgac 42975891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 381 - 534
Target Start/End: Original strand, 29316753 - 29316906
Alignment:
Q  381 gagaacttacgaaaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttt 480  Q
    ||||||| || ||||||  |||||||||||||||||||| ||||||||| ||||| ||| |||||| || |||| | ||||||||| ||||||| || |     
T  29316753 gagaactaacaaaaacagcttatgacatgttcataagttcttttcagcttatttccataagttctccaagatagctgatgaaaacagcttatagattatg 29316852  T
Q  481 tgaaaacatttcgactctattttatcttttgttaatgaaataacttaaacataa 534  Q
    |||||||| ||  ||  ||||||||||| |||||| || ||| |||| ||||||    
T  29316853 tgaaaacaatttaaccttattttatcttctgttaaagatatagcttagacataa 29316906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 395 - 511
Target Start/End: Complemental strand, 33942228 - 33942112
Alignment:
Q  395 acaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttttgaaaacatttcga 494  Q
    |||| |||||||||||||||||| ||||||||||||||||  ||  | ||||||  || | ||||||||||||||||||||||   |||||||| || ||    
T  33942228 acaacttatgacatgttcataagctgttttcagctaattttcattagctctctatgatggcttatgaaaacaacttatagcttacatgaaaacagtttga 33942129  T
Q  495 ctctattttatcttttg 511  Q
    || ||||||||||||||    
T  33942128 ctttattttatcttttg 33942112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 405 - 513
Target Start/End: Original strand, 22681187 - 22681295
Alignment:
Q  405 acatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttttgaaaacatttcgactctatttta 504  Q
    ||||||||||||| |||||| |||| ||||| ||| ||||||||  |||| ||||||||||| |||||||||| | |||||||| || | || | |||||    
T  22681187 acatgttcataagctgtttttagcttatttccataagttctctaggatagattatgaaaacagcttatagcttatatgaaaacaatttggctttgtttta 22681286  T
Q  505 tcttttgtt 513  Q
    |||||||||    
T  22681287 tcttttgtt 22681295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 421 - 513
Target Start/End: Complemental strand, 11513950 - 11513858
Alignment:
Q  421 ttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttttgaaaacatttcgactctattttatcttttgtt 513  Q
    ||||||||| ||||| | | |||||| |  |||| |||||||||||||||||||||| | |||||||| || |||| ||||||||||||||||    
T  11513950 ttttcagcttatttccaaaagttctccatgatagcttatgaaaacaacttatagcttatatgaaaacaatttgactttattttatcttttgtt 11513858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 456 - 514
Target Start/End: Complemental strand, 20258512 - 20258454
Alignment:
Q  456 ttatgaaaacaacttatagcttttttgaaaacatttcgactctattttatcttttgtta 514  Q
    ||||||||| |||||||||||| | | ||||||||||||| ||||||||||||||||||    
T  20258512 ttatgaaaataacttatagcttatatcaaaacatttcgacactattttatcttttgtta 20258454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 381 - 477
Target Start/End: Complemental strand, 35486009 - 35485913
Alignment:
Q  381 gagaacttacgaaaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagctt 477  Q
    |||||||||| ||| ||| |||||| ||||||||||| ||||||||||| ||||| ||| | |||  |  |||| |||| |||||||||||||||||    
T  35486009 gagaacttactaaagcaacttatgatatgttcataagctgttttcagctcatttccataggctcttcaggatagcttataaaaacaacttatagctt 35485913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 382 - 434
Target Start/End: Original strand, 44606089 - 44606141
Alignment:
Q  382 agaacttacgaaaacaaattatgacatgttcataagttgttttcagctaattt 434  Q
    |||||||| |||||||| ||||||||||| |||||||||||||||||| ||||    
T  44606089 agaacttatgaaaacaacttatgacatgtccataagttgttttcagctgattt 44606141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 451 - 534
Target Start/End: Complemental strand, 10143194 - 10143111
Alignment:
Q  451 ataggttatgaaaacaacttatagcttttttgaaaacatttcgactctattttatcttttgttaatgaaataacttaaacataa 534  Q
    |||| ||||||||| |||||||||||| | | |||||| || ||||  ||||||||||||||||  ||||||||||| ||||||    
T  10143194 atagcttatgaaaaaaacttatagcttatataaaaacagtttgacttaattttatcttttgttatagaaataacttatacataa 10143111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 386 - 472
Target Start/End: Complemental strand, 40279355 - 40279268
Alignment:
Q  386 cttacgaaaacaaattatgacat-gttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttat 472  Q
    |||| |||||||| ||||| ||| ||||||||  ||||||||||||||||  ||| |||||| || |||| |||||||||||||||||    
T  40279355 cttatgaaaacaacttatggcattgttcataaactgttttcagctaattttcataagttctccaatatagcttatgaaaacaacttat 40279268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 386 - 472
Target Start/End: Complemental strand, 40279425 - 40279338
Alignment:
Q  386 cttacgaaaacaaattatgacat-gttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttat 472  Q
    |||| |||||||| ||||| ||| ||||||||  ||||||||||||||||  ||| |||||| || |||| |||||||||||||||||    
T  40279425 cttatgaaaacaacttatggcattgttcataaactgttttcagctaattttcataagttctccaatatagcttatgaaaacaacttat 40279338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 391 - 477
Target Start/End: Original strand, 33931558 - 33931644
Alignment:
Q  391 gaaaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagctt 477  Q
    |||| ||| ||||||||||||||||||||  |||||||| ||||| |    ||||| ||||||| ||||||||||| ||||||||||    
T  33931558 gaaatcaacttatgacatgttcataagtttatttcagcttatttccactatttctccaaaatagcttatgaaaacagcttatagctt 33931644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 383 - 477
Target Start/End: Complemental strand, 40158808 - 40158714
Alignment:
Q  383 gaacttacgaaaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagctt 477  Q
    ||||||| |||||||  |||||||||||| ||||||||||||||||| | ||  ||| | |||| | ||||  ||||||||||||||||| ||||    
T  40158808 gaacttatgaaaacagcttatgacatgtttataagttgttttcagcttaattacataagctctccagaataacttatgaaaacaacttattgctt 40158714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 380 - 470
Target Start/End: Original strand, 43065427 - 43065517
Alignment:
Q  380 tgagaacttacgaaaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaactt 470  Q
    ||||| |||| |||||||| ||||||||||| ||||| |||||||||||| ||||| ||| | |||| |  |||  |||||||||||||||    
T  43065427 tgagagcttatgaaaacaacttatgacatgtccataaattgttttcagcttatttcaataagctctccacgataacttatgaaaacaactt 43065517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 382 - 459
Target Start/End: Complemental strand, 1647327 - 1647250
Alignment:
Q  382 agaacttacgaaaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttat 459  Q
    |||||||| |||||||  |||||||||| ||||||| ||||||||||| ||||| ||| | |||||| ||||| ||||    
T  1647327 agaacttatgaaaacagcttatgacatgctcataagctgttttcagcttatttccataagctctctataatagcttat 1647250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 386 - 511
Target Start/End: Complemental strand, 10285947 - 10285823
Alignment:
Q  386 cttacgaaaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttttgaaa 485  Q
    |||| ||||| || ||||||||||| |||||| |||||||| || ||||| ||| ||||||||   ||| ||||| |||| ||||||||||| | |||||    
T  10285947 cttatgaaaataacttatgacatgtccataagctgttttcaacttatttccataagttctctatgttagcttatgcaaacgacttatagcttatatgaaa 10285848  T
Q  486 acatttcgactctattttatcttttg 511  Q
     || || |||| |||||| |||||||    
T  10285847 ccagtttgact-tattttttcttttg 10285823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 391 - 508
Target Start/End: Original strand, 28039320 - 28039437
Alignment:
Q  391 gaaaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttttgaaaacatt 490  Q
    |||||||| ||||||| |||||||||| ||||||||||| ||||| |||  || || || | || |||||||||   ||||||| || | |||||||| |    
T  28039320 gaaaacaagttatgacttgttcataagctgttttcagcttatttccataacttttccaagaaagcttatgaaaattgcttatagtttatatgaaaacaat 28039419  T
Q  491 tcgactctattttatctt 508  Q
    | |||| |||||||||||    
T  28039420 tggactttattttatctt 28039437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 400 - 476
Target Start/End: Complemental strand, 16867812 - 16867736
Alignment:
Q  400 ttatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagct 476  Q
    ||||||||| ||||||||||||||||| || ||||| ||| | |||| || |||| || |||||||| |||||||||    
T  16867812 ttatgacatattcataagttgttttcaacttatttccataagctctccaagatagcttgtgaaaacaccttatagct 16867736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 381 - 453
Target Start/End: Original strand, 28677637 - 28677709
Alignment:
Q  381 gagaacttacgaaaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaata 453  Q
    ||||||||| |||||||  ||||||||| |||||||||||||||| ||| ||||| ||| | |||| ||||||    
T  28677637 gagaacttatgaaaacagcttatgacattttcataagttgttttcggcttatttccataagctctccaaaata 28677709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 451 - 527
Target Start/End: Original strand, 28803554 - 28803630
Alignment:
Q  451 ataggttatgaaaacaacttatagcttttttgaaaacatttcgactctattttatcttttgttaatgaaataactta 527  Q
    |||| ||| ||||||||||| |||||| | ||||| || || |||| |||||||||||||||||  |||||||||||    
T  28803554 atagtttaagaaaacaacttgtagcttatatgaaatcagtttgactttattttatcttttgttatcgaaataactta 28803630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 386 - 473
Target Start/End: Complemental strand, 40279285 - 40279197
Alignment:
Q  386 cttacgaaaacaaattatgacat-gttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttata 473  Q
    |||| |||||||| ||||| ||| ||||||||  | ||||||||||||||  ||| |||||| || |||| ||||||||||||||||||    
T  40279285 cttatgaaaacaacttatggcattgttcataaactattttcagctaattttcataagttctccaacatagcttatgaaaacaacttata 40279197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 393 - 476
Target Start/End: Complemental strand, 32821889 - 32821806
Alignment:
Q  393 aaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagct 476  Q
    |||||| ||||||||||| |||||| ||||||||| | ||||||||| | ||| ||  |||| |||||||||||  ||||||||    
T  32821889 aaacaacttatgacatgtccataagctgttttcagtttatttctataagctctttaggatagcttatgaaaacagtttatagct 32821806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 391 - 429
Target Start/End: Original strand, 1056117 - 1056155
Alignment:
Q  391 gaaaacaaattatgacatgttcataagttgttttcagct 429  Q
    |||||||| ||||||||||||||| ||||||||||||||    
T  1056117 gaaaacaacttatgacatgttcattagttgttttcagct 1056155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 407 - 473
Target Start/End: Complemental strand, 1625966 - 1625900
Alignment:
Q  407 atgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttata 473  Q
    ||||||||||| ||||||||||| ||||   || |||||| || |||| ||||||||||||||||||    
T  1625966 atgttcataagatgttttcagctgattttcgtaagttctccaagatagcttatgaaaacaacttata 1625900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 451 - 509
Target Start/End: Original strand, 5043608 - 5043666
Alignment:
Q  451 ataggttatgaaaacaacttatagcttttttgaaaacatttcgactctattttatcttt 509  Q
    |||| ||||||||||||||| |||||| | |||||||| || |||| ||||||||||||    
T  5043608 atagcttatgaaaacaacttctagcttatatgaaaacagtttgactttattttatcttt 5043666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 392 - 534
Target Start/End: Complemental strand, 5133853 - 5133711
Alignment:
Q  392 aaaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttttgaaaacattt 491  Q
    ||||||| |||||||||| ||||||| |  |||||||| ||||| ||| | ||||| | |||  || |||||||| |||||| ||| | | |||||| ||    
T  5133853 aaaacaacttatgacatggtcataagctactttcagcttatttccataagctctcttagataacttttgaaaacagcttatatcttatataaaaacagtt 5133754  T
Q  492 cgactctattttatcttttgttaatgaaataacttaaacataa 534  Q
       || |||||||||||||||||  |||||| |||| ||||||    
T  5133753 tatctttattttatcttttgttatagaaatagcttatacataa 5133711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 400 - 434
Target Start/End: Complemental strand, 10567130 - 10567096
Alignment:
Q  400 ttatgacatgttcataagttgttttcagctaattt 434  Q
    |||||||||| ||||||||||||||||||||||||    
T  10567130 ttatgacatgatcataagttgttttcagctaattt 10567096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 381 - 427
Target Start/End: Original strand, 32614926 - 32614972
Alignment:
Q  381 gagaacttacgaaaacaaattatgacatgttcataagttgttttcag 427  Q
    |||||||||  ||||||| |||||||||||||||| |||||||||||    
T  32614926 gagaacttataaaaacaacttatgacatgttcatatgttgttttcag 32614972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 381 - 435
Target Start/End: Complemental strand, 39622043 - 39621989
Alignment:
Q  381 gagaacttacgaaaacaaattatgacatgttcataagttgttttcagctaatttc 435  Q
    ||||||||| |||||||| ||||||||  ||||||| |||||||||||| |||||    
T  39622043 gagaacttatgaaaacaacttatgacaaattcataaattgttttcagcttatttc 39621989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 393 - 435
Target Start/End: Original strand, 41809235 - 41809277
Alignment:
Q  393 aaacaaattatgacatgttcataagttgttttcagctaatttc 435  Q
    |||||| ||||||||||||||||||||||||| |||| |||||    
T  41809235 aaacaacttatgacatgttcataagttgtttttagcttatttc 41809277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 380 - 429
Target Start/End: Complemental strand, 787425 - 787376
Alignment:
Q  380 tgagaacttacgaaaacaaattatgacatgttcataagttgttttcagct 429  Q
    |||||||||| |||||||  ||||||||||| |||||| |||||||||||    
T  787425 tgagaacttatgaaaacagcttatgacatgtccataagctgttttcagct 787376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 381 - 466
Target Start/End: Complemental strand, 8017526 - 8017441
Alignment:
Q  381 gagaacttacgaaaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaaca 466  Q
    ||||||||| |||||||  |||||| |||||||||| |||||||| ||  ||||  ||| |||||| || |||| |||||||||||    
T  8017526 gagaacttatgaaaacagcttatgatatgttcataatttgttttctgcgtattttcataagttctccaagatagcttatgaaaaca 8017441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 408 - 477
Target Start/End: Original strand, 29628748 - 29628817
Alignment:
Q  408 tgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagctt 477  Q
    ||||||||| |||||||||||| ||||| |||  || || || |||| |||||| |||||||||||||||    
T  29628748 tgttcataaattgttttcagcttatttccataaattttccaagatagcttatgagaacaacttatagctt 29628817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 393 - 434
Target Start/End: Original strand, 30538163 - 30538204
Alignment:
Q  393 aaacaaattatgacatgttcataagttgttttcagctaattt 434  Q
    |||||| ||||||||||| |||||||||||||||||| ||||    
T  30538163 aaacaacttatgacatgtccataagttgttttcagcttattt 30538204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 381 - 514
Target Start/End: Complemental strand, 33256832 - 33256699
Alignment:
Q  381 gagaacttacgaaaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttt 480  Q
    |||| |||| |||||||  |||||||||||||||||  |||| |||||| ||||  ||||| |||  |  || | ||||||||||  ||||||| || |     
T  33256832 gagagcttatgaaaacagcttatgacatgttcataaactgttctcagcttattttcatacggtcttcaggatggcttatgaaaactgcttatagtttata 33256733  T
Q  481 tgaaaacatttcgactctattttatcttttgtta 514  Q
    |||||||| || |||| |||||||||| ||||||    
T  33256732 tgaaaacagtttgactttattttatctattgtta 33256699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 381 - 466
Target Start/End: Original strand, 35378994 - 35379079
Alignment:
Q  381 gagaacttacgaaaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaaca 466  Q
    |||| |||| |||||||  | ||||| |||||||||||||||||||||| ||||  ||| | |||| || |||| |||||||||||    
T  35378994 gagagcttatgaaaacagctgatgacttgttcataagttgttttcagcttattttcataagctctccaagatagcttatgaaaaca 35379079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 400 - 429
Target Start/End: Original strand, 43910996 - 43911025
Alignment:
Q  400 ttatgacatgttcataagttgttttcagct 429  Q
    ||||||||||||||||||||||||||||||    
T  43910996 ttatgacatgttcataagttgttttcagct 43911025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 381 - 430
Target Start/End: Complemental strand, 44269058 - 44269009
Alignment:
Q  381 gagaacttacgaaaacaaattatgacatgttcataagttgttttcagcta 430  Q
    |||| ||||| ||||||| ||||||||||| ||||| |||||||||||||    
T  44269058 gagagcttacaaaaacaacttatgacatgtccataaattgttttcagcta 44269009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 1e-24; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 400 - 514
Target Start/End: Complemental strand, 24929566 - 24929452
Alignment:
Q  400 ttatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttttgaaaacatttcgactcta 499  Q
    ||||| ||||||||||| |||||||||||| ||||| ||| | ||||||  | || |||||||||||||||||||||||| |||||||| || |||| ||    
T  24929566 ttatggcatgttcataaattgttttcagcttatttccataagctctctagtagagtttatgaaaacaacttatagcttttatgaaaacagttagacttta 24929467  T
Q  500 ttttatcttttgtta 514  Q
    |||||||||||||||    
T  24929466 ttttatcttttgtta 24929452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 412 - 527
Target Start/End: Complemental strand, 49219200 - 49219085
Alignment:
Q  412 cataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttttgaaaacatttcgactctattttatcttttg 511  Q
    |||||||||||||||||| ||||| |||   ||| ||| |||| |||||||||||||||||||||| | |||||| | || |||| |||||||| |||||    
T  49219200 cataagttgttttcagcttatttccataatctctttaagatagtttatgaaaacaacttatagcttatatgaaaataatttgactttattttatattttg 49219101  T
Q  512 ttaatgaaataactta 527  Q
    |||  |||||||||||    
T  49219100 ttatagaaataactta 49219085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 401 - 527
Target Start/End: Original strand, 46415790 - 46415916
Alignment:
Q  401 tatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttttgaaaacatttcgactctat 500  Q
    |||||||||| |||||||||||||||||||||||   || | |||| |  |||| ||||||||| |||||||| ||| | |||||||| || ||  ||||    
T  46415790 tatgacatgtccataagttgttttcagctaattttactaagctctcgaggatagcttatgaaaagaacttataacttgtatgaaaacagtttgatcctat 46415889  T
Q  501 tttatcttttgttaatgaaataactta 527  Q
    |||||||||||||| ||||||| ||||    
T  46415890 tttatcttttgttattgaaatagctta 46415916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 381 - 514
Target Start/End: Complemental strand, 2996665 - 2996532
Alignment:
Q  381 gagaacttacgaaaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttt 480  Q
    |||| |||| |||||||| ||||||||||| |||||| | |||||| || ||||  ||||| |||| || |||| |||||||||||||||||| ||| |     
T  2996665 gagagcttatgaaaacaacttatgacatgtccataagcttttttcaacttattttcatacgctctccaagatagcttatgaaaacaacttataacttata 2996566  T
Q  481 tgaaaacatttcgactctattttatcttttgtta 514  Q
    | |||||| || |||| ||||||||||| |||||    
T  2996565 taaaaacaatttgactgtattttatcttatgtta 2996532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 391 - 514
Target Start/End: Original strand, 8469365 - 8469488
Alignment:
Q  391 gaaaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttttgaaaacatt 490  Q
    |||| ||| |||||||||||||||||||||||||||||| ||||| ||| |||||||| | ||  ||||||||| |||||| ||| | | ||||| || |    
T  8469365 gaaagcaatttatgacatgttcataagttgttttcagcttatttccataggttctctagactaacttatgaaaaaaacttacagcctatatgaaagcact 8469464  T
Q  491 tcgactctattttatcttttgtta 514  Q
    | |||  ||||||||||| |||||    
T  8469465 ttgacattattttatcttctgtta 8469488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 407 - 532
Target Start/End: Complemental strand, 17884134 - 17884009
Alignment:
Q  407 atgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttttgaaaacatttcgactctattttatc 506  Q
    ||||||||||||||||||||||||||||  ||| | |||| || |||| |||||||||||||| ||| ||| |   |||||| ||  ||| |||||||||    
T  17884134 atgttcataagttgttttcagctaattttcataagctctccaatatagcttatgaaaacaactgataacttatacaaaaacaatttaactttattttatc 17884035  T
Q  507 ttttgttaatgaaataacttaaacat 532  Q
    ||||||||  |||||| |||| ||||    
T  17884034 ttttgttatagaaatagcttacacat 17884009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 391 - 534
Target Start/End: Complemental strand, 23819171 - 23819029
Alignment:
Q  391 gaaaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttttgaaaacatt 490  Q
    |||||||  ||||||||||| ||||||||||||||| || ||||||||| | |||  || |||| |||||||||||  ||||| ||| | |||||||| |    
T  23819171 gaaaacagcttatgacatgtccataagttgttttcatcttatttctataagctcttcaagatagcttatgaaaacatgttataacttatatgaaaacagt 23819072  T
Q  491 tcgactctattttatcttttgttaatgaaataacttaaacataa 534  Q
    | ||||  |||||||  |||||||  ||||||||||| ||||||    
T  23819071 ttgactacattttat-atttgttatggaaataacttatacataa 23819029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 381 - 474
Target Start/End: Complemental strand, 1137804 - 1137711
Alignment:
Q  381 gagaacttacgaaaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatag 474  Q
    ||||||||| |||||||  |||||||||||||||||||||||||||| | ||||| ||| | |||||   |||| |||||||| || |||||||    
T  1137804 gagaacttatgaaaacatcttatgacatgttcataagttgttttcagtttatttccataagctctcttggatagtttatgaaagcagcttatag 1137711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 400 - 477
Target Start/End: Complemental strand, 42685497 - 42685420
Alignment:
Q  400 ttatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagctt 477  Q
    |||||||||||| ||||||||||||  ||| ||||  | |||||||| ||||||| |||||||||||||||| |||||    
T  42685497 ttatgacatgtttataagttgtttttggcttattttcacacgttctccaaaatagcttatgaaaacaacttagagctt 42685420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 385 - 475
Target Start/End: Complemental strand, 46110291 - 46110201
Alignment:
Q  385 acttacgaaaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagc 475  Q
    ||||| |||||||| |||||| ||  ||||||||||||||||||| ||||||||| | |||| |  |||| |||||||||||  |||||||    
T  46110291 acttatgaaaacaacttatgatatactcataagttgttttcagcttatttctataagctctcaatcatagcttatgaaaacagtttatagc 46110201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 456 - 514
Target Start/End: Complemental strand, 53626793 - 53626735
Alignment:
Q  456 ttatgaaaacaacttatagcttttttgaaaacatttcgactctattttatcttttgtta 514  Q
    ||||||||||| |||||||||| | ||||||||||| || | |||||||||||||||||    
T  53626793 ttatgaaaacagcttatagcttatatgaaaacattttgaatttattttatcttttgtta 53626735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 456 - 514
Target Start/End: Original strand, 55870394 - 55870452
Alignment:
Q  456 ttatgaaaacaacttatagcttttttgaaaacatttcgactctattttatcttttgtta 514  Q
    |||||||||||||||||||||| | |||||||| || |||| ||||| |||||||||||    
T  55870394 ttatgaaaacaacttatagcttatgtgaaaacagtttgactttatttgatcttttgtta 55870452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 149
Target Start/End: Original strand, 10601679 - 10601772
Alignment:
Q  56 aaaaacgaacctgagtaaagtcgaagtacgattgagatgccatgggacataggaccgtacaatcctacgaaccagcactcgatcctgactacaa 149  Q
    |||||||||| ||||||||||||||  | ||||||| || |||||||| |||||  |||  ||||||||||| | ||||||| | |||||||||    
T  10601679 aaaaacgaacatgagtaaagtcgaaacatgattgaggtgtcatgggacgtaggattgtaagatcctacgaacaaacactcgaacttgactacaa 10601772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 401 - 514
Target Start/End: Original strand, 30207569 - 30207681
Alignment:
Q  401 tatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttttgaaaacatttcgactctat 500  Q
    ||||||||||   |||| ||||||||||| ||||| |||   |||||||  ||| |||||||||||||||||||||| | |||||||| || || | |||    
T  30207569 tatgacatgtctgtaagctgttttcagcttatttccataatctctctaaggtagcttatgaaaacaacttatagcttatatgaaaacagtttga-tttat 30207667  T
Q  501 tttatcttttgtta 514  Q
    ||||| ||||||||    
T  30207668 tttattttttgtta 30207681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 381 - 470
Target Start/End: Original strand, 33534147 - 33534236
Alignment:
Q  381 gagaacttacgaaaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaactt 470  Q
    |||| |||| ||||||||||| |||||| | |||||||||||||||||| ||||  ||| | |||| ||||||  ||| |||||||||||    
T  33534147 gagagcttatgaaaacaaattgtgacatatccataagttgttttcagcttattttcataagctctcaaaaataatttacgaaaacaactt 33534236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 400 - 477
Target Start/End: Complemental strand, 42121560 - 42121484
Alignment:
Q  400 ttatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagctt 477  Q
    |||||||||||||||||| ||||| ||||| ||||| | | |||||| || |||| | ||||||||||||||||||||    
T  42121560 ttatgacatgttcataagctgttt-cagcttatttccacaagttctccaagatagctcatgaaaacaacttatagctt 42121484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 381 - 510
Target Start/End: Complemental strand, 44320041 - 44319912
Alignment:
Q  381 gagaacttacgaaaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttt 480  Q
    |||| |||| |||||||||||||||  | | ||| || | |||||| |||||||  ||| ||||||||  |||| |||| |||| | ||| |||||| |     
T  44320041 gagagcttatgaaaacaaattatgatgtatccattagctattttcaactaattttcataagttctctaggatagcttatcaaaatagcttgtagcttata 44319942  T
Q  481 tgaaaacatttcgactctattttatctttt 510  Q
    |||||||| ||||||| |||||||||||||    
T  44319941 tgaaaacagttcgactttattttatctttt 44319912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 402 - 477
Target Start/End: Original strand, 7694009 - 7694084
Alignment:
Q  402 atgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagctt 477  Q
    |||||||||||||||||||||||||||| ||||| |||   |||| |  |||  ||||||||||| ||||||||||    
T  7694009 atgacatgttcataagttgttttcagcttatttccataaactctccaggataacttatgaaaacagcttatagctt 7694084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 459 - 522
Target Start/End: Complemental strand, 18630694 - 18630631
Alignment:
Q  459 tgaaaacaacttatagcttttttgaaaacatttcgactctattttatcttttgttaatgaaata 522  Q
    ||||||||||||||||||| | |||||||   | |||| ||||||||||||||||| |||||||    
T  18630694 tgaaaacaacttatagcttatatgaaaaccaattgactttattttatcttttgttattgaaata 18630631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 408 - 507
Target Start/End: Original strand, 31038872 - 31038971
Alignment:
Q  408 tgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttttgaaaacatttcgactctattttatct 507  Q
    ||||||||||||||||||| || ||||||||| ||||||||  | || |||| ||||   |||||| ||| | |||||||| || |||| ||||||||||    
T  31038872 tgttcataagttgttttcaacttatttctataagttctctattagagcttataaaaatggcttataacttatatgaaaacaatttgactttattttatct 31038971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 400 - 439
Target Start/End: Complemental strand, 46201421 - 46201382
Alignment:
Q  400 ttatgacatgttcataagttgttttcagctaatttctata 439  Q
    |||||||||||||||| ||||||||||||| |||||||||    
T  46201421 ttatgacatgttcataggttgttttcagcttatttctata 46201382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 149
Target Start/End: Complemental strand, 55911279 - 55911185
Alignment:
Q  55 caaaaacgaacctgagt-aaagtcgaagtacgattgagatgccatgggacataggaccgtacaatcctacgaaccagcactcgatcctgactacaa 149  Q
    ||||||||||| ||| | |||||| ||| ||||||||| |||| ||| |  ||||| ||||  ||||||||||||||||||||||| |||||||||    
T  55911279 caaaaacgaacttgacttaaagtcaaagcacgattgaggtgccgtgg-atgtaggatcgtatgatcctacgaaccagcactcgatcttgactacaa 55911185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 392 - 474
Target Start/End: Original strand, 6466035 - 6466117
Alignment:
Q  392 aaaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatag 474  Q
    ||||||| |||||| ||||||||||| | |||||| || ||||| |||   |||||| ||||| ||||| |||||||||||||    
T  6466035 aaaacaacttatgagatgttcataagctattttcaacttatttccataatctctctagaatagcttatggaaacaacttatag 6466117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 412 - 514
Target Start/End: Complemental strand, 11802595 - 11802493
Alignment:
Q  412 cataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttttgaaaacatttcgactctattttatcttttg 511  Q
    |||||| ||||||||||| |||   ||| | |||| | ||||| ||||||||||||||| |||||| | ||| || | || |||| ||||||||||||||    
T  11802595 cataagctgttttcagcttattctcataagctctccataatagcttatgaaaacaacttgtagcttatgtgagaaaaatttgactttattttatcttttg 11802496  T
Q  512 tta 514  Q
    |||    
T  11802495 tta 11802493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 382 - 511
Target Start/End: Original strand, 52315175 - 52315305
Alignment:
Q  382 agaacttacgaaaacaaattatgacatg-ttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttt 480  Q
    ||||||||  ||||||| |||| ||||  ||||||||||| |||||||| ||||  ||| ||| || ||||||| ||||| |||||||||||| ||||      
T  52315175 agaacttatcaaaacaacttatcacattattcataagttgctttcagcttattttcataagttttccaaaatagcttatggaaacaacttataactttac 52315274  T
Q  481 tgaaaacatttcgactctattttatcttttg 511  Q
    | |||||| ||  ||| ||||| ||||||||    
T  52315275 taaaaacaattaaactttatttcatcttttg 52315305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 415 - 532
Target Start/End: Original strand, 18628555 - 18628672
Alignment:
Q  415 aagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttttgaaaacatttcgactctattttatcttttgtta 514  Q
    ||||||||||||||| ||||| ||| | |||| || |||  |||||||||||  ||||| ||| | | |||||| || |||| ||||||  |||||||||    
T  18628555 aagttgttttcagcttatttccataagctctccaagataacttatgaaaacagtttataacttatataaaaacagtttgactatatttttccttttgtta 18628654  T
Q  515 atgaaataacttaaacat 532  Q
    | ||||||| ||| ||||    
T  18628655 aagaaataatttatacat 18628672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 461 - 510
Target Start/End: Original strand, 25434518 - 25434567
Alignment:
Q  461 aaaacaacttatagcttttttgaaaacatttcgactctattttatctttt 510  Q
    ||||||||||||||||| | ||||||||| | |||| |||||||||||||    
T  25434518 aaaacaacttatagcttatatgaaaacatattgactttattttatctttt 25434567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 381 - 426
Target Start/End: Original strand, 37863932 - 37863977
Alignment:
Q  381 gagaacttacgaaaacaaattatgacatgttcataagttgttttca 426  Q
    ||||||||| |||||||  |||||||| ||||||||||||||||||    
T  37863932 gagaacttatgaaaacagcttatgacacgttcataagttgttttca 37863977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 5e-24; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 393 - 514
Target Start/End: Complemental strand, 30371228 - 30371107
Alignment:
Q  393 aaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttttgaaaacatttc 492  Q
    |||||| | ||||||||| |||||||||||||||||| ||||| ||||| |||| |||||   |||||||||||||||||||||| | |||||||| ||     
T  30371228 aaacaactaatgacatgtccataagttgttttcagcttatttcaatacgctctccaaaatgtcttatgaaaacaacttatagcttatatgaaaacaattt 30371129  T
Q  493 gactctattttatcttttgtta 514  Q
    || | |||||||||||||||||    
T  30371128 gagtttattttatcttttgtta 30371107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 50 - 149
Target Start/End: Complemental strand, 50204622 - 50204523
Alignment:
Q  50 caaagcaaaaacgaacctgagtaaagtcgaagtacgattgagatgccatgggacataggaccgtacaatcctacgaaccagcactcgatcctgactacaa 149  Q
    ||||| ||||| |||||||||||||||||||| ||||||||| |||  ||| || ||||| | ||| |||||||||||||||||||||||||||||||||    
T  50204622 caaagaaaaaatgaacctgagtaaagtcgaagcacgattgaggtgctgtggaacgtaggatcatacgatcctacgaaccagcactcgatcctgactacaa 50204523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 382 - 533
Target Start/End: Original strand, 37842334 - 37842485
Alignment:
Q  382 agaacttacgaaaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagctttttt 481  Q
    |||||||| |||||||  | ||||||||||||||||  |||||||||| |||| |||| |||||  || |||| |||||||||||||||||||||| ||     
T  37842334 agaacttatgaaaacatctaatgacatgttcataagcagttttcagcttatttttataagttcttcaagatagcttatgaaaacaacttatagcttattc 37842433  T
Q  482 gaaaacatttcgactctattttatcttttgttaatgaaataacttaaacata 533  Q
    ||| ||| ||  ||| ||||| |||||||| ||  |||||| |||| |||||    
T  37842434 gaacacagtttaactttatttcatcttttgctatagaaatagcttatacata 37842485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 400 - 510
Target Start/End: Complemental strand, 30257756 - 30257646
Alignment:
Q  400 ttatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttttgaaaacatttcgactcta 499  Q
    |||||||||||||||||| ||||||||||| ||||||||| |  ||| |  |||| |||||||||||||||| ||||| | || ||||| || |||| ||    
T  30257756 ttatgacatgttcataagctgttttcagcttatttctataagccctccaggatagtttatgaaaacaacttaaagcttatatggaaacagtttgacttta 30257657  T
Q  500 ttttatctttt 510  Q
    |||||||||||    
T  30257656 ttttatctttt 30257646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 393 - 534
Target Start/End: Original strand, 29007706 - 29007847
Alignment:
Q  393 aaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttttgaaaacatttc 492  Q
    |||||| |||||| ||||||||||||||||||||||| ||||| ||| | | |  ||| |||   |||||||||||||||||||| | |||||| | ||     
T  29007706 aaacaatttatgatatgttcataagttgttttcagcttatttcgataagcttttcaaagtagccgatgaaaacaacttatagcttatatgaaaatagttt 29007805  T
Q  493 gactctattttatcttttgttaatgaaataacttaaacataa 534  Q
    |||| || ||| ||||||||||  ||||||||||| ||||||    
T  29007806 gactttaatttttcttttgttatagaaataacttagacataa 29007847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 386 - 514
Target Start/End: Complemental strand, 25479668 - 25479540
Alignment:
Q  386 cttacgaaaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttttgaaa 485  Q
    |||| ||||| | |||||||||||||||| |||||||||||||| ||||  ||| | ||||||  |||| |||||||||||||||||||| | | ||||     
T  25479668 cttatgaaaatagattatgacatgttcattagttgttttcagcttattttcataagctctctaggatagcttatgaaaacaacttatagcctatatgaag 25479569  T
Q  486 acatttcgactctattttatcttttgtta 514  Q
    ||| || |||  |||||||||||| ||||    
T  25479568 acaatttgacgttattttatctttggtta 25479540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 391 - 510
Target Start/End: Original strand, 7218062 - 7218181
Alignment:
Q  391 gaaaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttttgaaaacatt 490  Q
    |||||| | |||||||| ||||| ||| |||||||| || ||||  ||| |||||| |  ||||||||||||||||||||||||||| | |||||||| |    
T  7218062 gaaaacgacttatgacacgttcacaagctgttttcaacttattttcataagttctccaggataggttatgaaaacaacttatagcttatatgaaaacaat 7218161  T
Q  491 tcgactctattttatctttt 510  Q
    | |||| ||||||| |||||    
T  7218162 ttgactttattttacctttt 7218181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 400 - 527
Target Start/End: Original strand, 10199405 - 10199532
Alignment:
Q  400 ttatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttttgaaaacatttcgactcta 499  Q
    |||||||||||||||||||||||||||||| ||||  ||| | |||||||||||| ||||||||| | ||||| | || |  ||||| | || |||| ||    
T  10199405 ttatgacatgttcataagttgttttcagcttattttcataagctctctaaaatagcttatgaaaaaagcttatcgattatacgaaaatagtttgacttta 10199504  T
Q  500 ttttatcttttgttaatgaaataactta 527  Q
    |||||||||  ||||  |||||||||||    
T  10199505 ttttatcttgggttatagaaataactta 10199532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 400 - 534
Target Start/End: Original strand, 16981933 - 16982067
Alignment:
Q  400 ttatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttttgaaaacatttcgactcta 499  Q
    ||||||||||| ||||||||||||| |||| |||| |||| | |||| |  |||| |||||| |||| |||| || |||| | |||||| ||| ||| ||    
T  16981933 ttatgacatgtccataagttgtttttagcttatttatataagctctccatgatagcttatgataacatcttaaagtttttgtaaaaacaattccacttta 16982032  T
Q  500 ttttatcttttgttaatgaaataacttaaacataa 534  Q
    |||||||||||||||  ||||||| ||| ||||||    
T  16982033 ttttatcttttgttatcgaaataagttatacataa 16982067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 381 - 513
Target Start/End: Original strand, 31517718 - 31517850
Alignment:
Q  381 gagaacttacgaaaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttt 480  Q
    |||||||||  ||||||| | |||||||||||||||| ||||||||||| ||||  ||| | |||| || | || ||||||| ||| |||||||||| |     
T  31517718 gagaacttatcaaaacaactcatgacatgttcataagctgttttcagcttattttcataagctctccaagacagattatgaagacagcttatagcttata 31517817  T
Q  481 tgaaaacatttcgactctattttatcttttgtt 513  Q
    ||||| || ||  ||| ||||||||||||||||    
T  31517818 tgaaatcaatttaactttattttatcttttgtt 31517850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 407 - 466
Target Start/End: Original strand, 28077073 - 28077132
Alignment:
Q  407 atgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaaca 466  Q
    ||||||||||||||||||||||| ||||| ||| | |||||||||||| |||||||||||    
T  28077073 atgttcataagttgttttcagcttatttcaataagctctctaaaatagcttatgaaaaca 28077132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 405 - 479
Target Start/End: Complemental strand, 15558285 - 15558211
Alignment:
Q  405 acatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagctttt 479  Q
    ||||| ||||||||||||||||||| ||||||||| ||||||||  |||  ||||||||||| |||||| |||||    
T  15558285 acatgctcataagttgttttcagcttatttctataagttctctaggatatcttatgaaaacagcttataactttt 15558211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 381 - 474
Target Start/End: Complemental strand, 10744393 - 10744300
Alignment:
Q  381 gagaacttacgaaaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatag 474  Q
    ||||||||  |||||||  ||||| |||||||||||| |||||||| || |||| |||| ||||||||| | || ||||||||||| |||||||    
T  10744393 gagaacttgtgaaaacagcttatggcatgttcataagctgttttcatcttatttttataagttctctaagacagcttatgaaaacagcttatag 10744300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 400 - 485
Target Start/End: Original strand, 27963367 - 27963452
Alignment:
Q  400 ttatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttttgaaa 485  Q
    ||||||||||| ||||||||||||| |||| |||| |||| | |||| | ||||| |||||||||||||||| | ||||| |||||    
T  27963367 ttatgacatgtccataagttgtttttagcttatttatataagctctccataatagcttatgaaaacaacttagaacttttatgaaa 27963452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 381 - 487
Target Start/End: Original strand, 28689430 - 28689538
Alignment:
Q  381 gagaacttacgaaaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggt--tatgaaaacaacttatagcttt 478  Q
    ||||||||||| |||||  ||||||||||| |||||||||||||||||| ||||  ||| | | || || |||| |  |||||||||||||||||||||     
T  28689430 gagaacttacggaaacagcttatgacatgtccataagttgttttcagcttattttcataagctttccaagatagcttatatgaaaacaacttatagctta 28689529  T
Q  479 tttgaaaac 487  Q
    | |||||||    
T  28689530 tatgaaaac 28689538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 400 - 477
Target Start/End: Complemental strand, 34290309 - 34290232
Alignment:
Q  400 ttatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagctt 477  Q
    ||||||||| |||||||||||||||||||| ||||  ||| |||||  || |||| ||||||||||| ||||||||||    
T  34290309 ttatgacatattcataagttgttttcagcttattttcataagttcttcaagatagcttatgaaaacagcttatagctt 34290232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 393 - 468
Target Start/End: Original strand, 3070080 - 3070156
Alignment:
Q  393 aaacaaattatgacatgttcataagttgttttcagc-taatttctatacgttctctaaaataggttatgaaaacaac 468  Q
    |||||| |||||||||||||||||| |||||||||| |||||  |||| ||||||  |||||| |||||||||||||    
T  3070080 aaacaacttatgacatgttcataagctgttttcagcttaattattataagttctcccaaatagcttatgaaaacaac 3070156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 381 - 429
Target Start/End: Complemental strand, 4549940 - 4549892
Alignment:
Q  381 gagaacttacgaaaacaaattatgacatgttcataagttgttttcagct 429  Q
    ||||||||  ||||||| |||||||||||||||||||||||||||||||    
T  4549940 gagaacttctgaaaacagattatgacatgttcataagttgttttcagct 4549892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 406 - 486
Target Start/End: Original strand, 23902070 - 23902150
Alignment:
Q  406 catgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttttgaaaa 486  Q
    ||||| |||||||||||||||||| | ||| ||| | ||||||| |||| || ||||||||||||||||||| | ||||||    
T  23902070 catgtgcataagttgttttcagcttacttccataagctctctaagatagcttttgaaaacaacttatagcttatatgaaaa 23902150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 98 - 149
Target Start/End: Complemental strand, 43866334 - 43866283
Alignment:
Q  98 tgggacataggaccgtacaatcctacgaaccagcactcgatcctgactacaa 149  Q
    |||| ||||||| ||||  |||||||||||||||||||||||||||||||||    
T  43866334 tgggccataggatcgtaagatcctacgaaccagcactcgatcctgactacaa 43866283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 456 - 527
Target Start/End: Complemental strand, 49517087 - 49517016
Alignment:
Q  456 ttatgaaaacaacttatagcttttttgaaaacatttcgactctattttatcttttgttaatgaaataactta 527  Q
    ||||||||||| ||||||||||   |||||||| || |||| |||||||||||||||||  |||||||||||    
T  49517087 ttatgaaaacagcttatagcttaaatgaaaacaatttgactttattttatcttttgttatagaaataactta 49517016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 385 - 439
Target Start/End: Original strand, 4699597 - 4699651
Alignment:
Q  385 acttacgaaaacaaattatgacatgttcataagttgttttcagctaatttctata 439  Q
    ||||| |||||||| |||||||||||||||||| |||||| |||| |||||||||    
T  4699597 acttatgaaaacaacttatgacatgttcataagctgtttttagcttatttctata 4699651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 456 - 510
Target Start/End: Original strand, 5592738 - 5592792
Alignment:
Q  456 ttatgaaaacaacttatagcttttttgaaaacatttcgactctattttatctttt 510  Q
    |||||||||||||||||||||| | ||| |||| ||||||| |||||||||||||    
T  5592738 ttatgaaaacaacttatagcttatatgacaacaattcgactttattttatctttt 5592792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 400 - 474
Target Start/End: Original strand, 7136995 - 7137069
Alignment:
Q  400 ttatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatag 474  Q
    ||||||||| |||||||||| ||||||||| ||||  ||| |||||| || |||| ||||||||||| |||||||    
T  7136995 ttatgacatattcataagttattttcagcttattttcataagttctccaagatagcttatgaaaacagcttatag 7137069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 464 - 534
Target Start/End: Complemental strand, 15360903 - 15360833
Alignment:
Q  464 acaacttatagcttttttgaaaacatttcgactctattttatcttttgttaatgaaataacttaaacataa 534  Q
    |||||||||||||| | |||||||| || |||| |||||||||||||||||  ||||||||| | ||||||    
T  15360903 acaacttatagcttatatgaaaacagtttgactttattttatcttttgttatagaaataactaatacataa 15360833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 381 - 466
Target Start/End: Original strand, 15942725 - 15942811
Alignment:
Q  381 gagaacttacgaaaacaaattatgacatgttcataag-ttgttttcagctaatttctatacgttctctaaaataggttatgaaaaca 466  Q
    ||||| ||| |||||||| ||||||||||||||||||  ||||||||||| ||||| ||| |||||| || |||  |||||||||||    
T  15942725 gagaatttatgaaaacaacttatgacatgttcataagcatgttttcagcttatttcaataagttctccaagataaattatgaaaaca 15942811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 393 - 511
Target Start/End: Complemental strand, 16322929 - 16322811
Alignment:
Q  393 aaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttttgaaaacatttc 492  Q
    |||||| ||||| ||||  ||||||||||||| |||| ||||| ||| | |||  |||||||  |||||||||| |||||| ||| | |||||| | ||     
T  16322929 aaacaacttatgtcatgcacataagttgtttttagcttatttccataagctcttcaaaatagcctatgaaaacagcttataacttctatgaaaatagttt 16322830  T
Q  493 gactctattttatcttttg 511  Q
    |||| ||||||||||||||    
T  16322829 gactatattttatcttttg 16322811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 400 - 534
Target Start/End: Complemental strand, 17269323 - 17269189
Alignment:
Q  400 ttatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttttgaaaacatttcgactcta 499  Q
    ||||||||||||||| ||||||||| | || ||| |  || | |||| |  |||| ||||||||||||||||| |||| | |||||||| || |||| ||    
T  17269323 ttatgacatgttcatgagttgtttttaacttattaccgtaagctctccaggatagcttatgaaaacaacttattgcttatatgaaaacaatttgacttta 17269224  T
Q  500 ttttatcttttgttaatgaaataacttaaacataa 534  Q
    ||||  ||||||||   ||||||||||| ||||||    
T  17269223 ttttcacttttgttctagaaataacttatacataa 17269189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 451 - 513
Target Start/End: Original strand, 27738228 - 27738290
Alignment:
Q  451 ataggttatgaaaacaacttatagcttttttgaaaacatttcgactctattttatcttttgtt 513  Q
    |||| |||||||||||| ||||||||| | |||||||| || |||| ||||||||||||||||    
T  27738228 atagcttatgaaaacaaattatagcttatatgaaaacaatttgactttattttatcttttgtt 27738290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 400 - 477
Target Start/End: Complemental strand, 3224496 - 3224419
Alignment:
Q  400 ttatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagctt 477  Q
    ||||||||||| ||||||||||| |||||| ||||  ||| |||||||| ||||| |||| |||||| | ||||||||    
T  3224496 ttatgacatgtccataagttgttctcagcttattttcataagttctctagaatagcttataaaaacaccctatagctt 3224419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 443 - 512
Target Start/End: Original strand, 5421960 - 5422029
Alignment:
Q  443 tctctaaaataggttatgaaaacaacttatagcttttttgaaaacatttcgactctattttatcttttgt 512  Q
    ||||||| |||| |||| ||||||||||||||||| |  ||||||| || |||| |||||||||||||||    
T  5421960 tctctaagatagcttatcaaaacaacttatagcttataagaaaacaatttgactatattttatcttttgt 5422029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 400 - 473
Target Start/End: Original strand, 12564496 - 12564569
Alignment:
Q  400 ttatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttata 473  Q
    |||||||| ||  ||||||||||||||||| ||||| ||| |||||| || |||| ||||||||||||| ||||    
T  12564496 ttatgacaagtcaataagttgttttcagcttatttccataagttctccaagatagcttatgaaaacaacctata 12564569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 400 - 477
Target Start/End: Original strand, 27887115 - 27887192
Alignment:
Q  400 ttatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagctt 477  Q
    ||||||||||| ||||| ||||||| |||| |||| |||| | |||| |  |||| ||||||||||||||||||||||    
T  27887115 ttatgacatgtccataaattgtttttagcttatttttatatgctctccatgatagtttatgaaaacaacttatagctt 27887192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 381 - 434
Target Start/End: Complemental strand, 29635439 - 29635386
Alignment:
Q  381 gagaacttacgaaaacaaattatgacatgttcataagttgttttcagctaattt 434  Q
    ||||| ||| |||||||| |||||||||||| ||||||||||||||||| ||||    
T  29635439 gagaatttatgaaaacaagttatgacatgtttataagttgttttcagcttattt 29635386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 401 - 477
Target Start/End: Original strand, 14629964 - 14630040
Alignment:
Q  401 tatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagctt 477  Q
    ||||| ||||||||||||||||||||||| ||||| |||   |||| || |||| ||||||||| | ||||||||||    
T  14629964 tatgatatgttcataagttgttttcagcttatttccataaagtctccaagatagcttatgaaaatagcttatagctt 14630040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 386 - 510
Target Start/End: Complemental strand, 17420290 - 17420166
Alignment:
Q  386 cttacgaaaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttttgaaa 485  Q
    |||| |||||||| |||| |||||| ||||| ||||||||| || ||||| ||  ||| ||| | |||| ||| |||||||  ||||||||| | |||||    
T  17420290 cttatgaaaacaacttattacatgtccataaattgttttcaacttatttccattagttttctgagatagcttacgaaaacagtttatagcttatatgaaa 17420191  T
Q  486 acatttcgactctattttatctttt 510  Q
    |   ||||||| |||||||||||||    
T  17420190 attgttcgactttattttatctttt 17420166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 384 - 444
Target Start/End: Complemental strand, 31118132 - 31118072
Alignment:
Q  384 aacttacgaaaacaaattatgacatgttcataagttgttttcagctaatttctatacgttc 444  Q
    |||||| |||||||  ||||||||||||||| |||||||||||||| ||||| ||| ||||    
T  31118132 aacttatgaaaacatcttatgacatgttcatcagttgttttcagcttatttccataagttc 31118072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 53 - 149
Target Start/End: Complemental strand, 33966738 - 33966642
Alignment:
Q  53 agcaaaaacgaacctgagtaaagtcgaagtacgattgagatgccatgggacataggaccgtacaatcctacgaaccagcactcgatcctgactacaa 149  Q
    |||||||||||||  |||| ||||| ||| ||| ||||| |||| ||| || ||| | ||||  ||||||||| |||||||||||||||| ||||||    
T  33966738 agcaaaaacgaactggagtgaagtcaaagcacggttgaggtgccgtggcacgtagaatcgtaagatcctacgagccagcactcgatcctggctacaa 33966642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 437 - 477
Target Start/End: Original strand, 37295752 - 37295792
Alignment:
Q  437 atacgttctctaaaataggttatgaaaacaacttatagctt 477  Q
    ||||||| ||||| |||||||||||||||||||||||||||    
T  37295752 atacgttttctaagataggttatgaaaacaacttatagctt 37295792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 381 - 429
Target Start/End: Complemental strand, 38001688 - 38001640
Alignment:
Q  381 gagaacttacgaaaacaaattatgacatgttcataagttgttttcagct 429  Q
    ||||||||| |||||||  ||||||| ||||||||||||||||||||||    
T  38001688 gagaacttatgaaaacagcttatgacctgttcataagttgttttcagct 38001640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 381 - 429
Target Start/End: Original strand, 38170668 - 38170716
Alignment:
Q  381 gagaacttacgaaaacaaattatgacatgttcataagttgttttcagct 429  Q
    |||| |||| |||||||  ||||||||||||||||||||||||||||||    
T  38170668 gagagcttatgaaaacagcttatgacatgttcataagttgttttcagct 38170716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 400 - 475
Target Start/End: Original strand, 12287189 - 12287264
Alignment:
Q  400 ttatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagc 475  Q
    ||||| ||| |||||||||||||||||||| |||| | || ||||  ||| |||| ||| ||||||||||||||||    
T  12287189 ttatggcattttcataagttgttttcagcttatttttgtaagttccataagatagcttaagaaaacaacttatagc 12287264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 400 - 439
Target Start/End: Original strand, 34278690 - 34278729
Alignment:
Q  400 ttatgacatgttcataagttgttttcagctaatttctata 439  Q
    |||||||||||||||| ||||||||||||| |||||||||    
T  34278690 ttatgacatgttcataggttgttttcagcttatttctata 34278729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 382 - 429
Target Start/End: Original strand, 42757156 - 42757203
Alignment:
Q  382 agaacttacgaaaacaaattatgacatgttcataagttgttttcagct 429  Q
    ||||||||||||||||| |||| |||| |||||||| |||||||||||    
T  42757156 agaacttacgaaaacaacttattacatattcataagctgttttcagct 42757203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 469 - 520
Target Start/End: Original strand, 49365825 - 49365876
Alignment:
Q  469 ttatagcttttttgaaaacatttcgactctattttatcttttgttaatgaaa 520  Q
    ||||||||| | |||||||| || |||||||||||||||||||||| |||||    
T  49365825 ttatagcttgtatgaaaacaatttgactctattttatcttttgttactgaaa 49365876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 393 - 435
Target Start/End: Complemental strand, 3223747 - 3223705
Alignment:
Q  393 aaacaaattatgacatgttcataagttgttttcagctaatttc 435  Q
    |||||| |||||||||||| ||||||||||||||||| |||||    
T  3223747 aaacaacttatgacatgtttataagttgttttcagcttatttc 3223705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 400 - 434
Target Start/End: Original strand, 5886991 - 5887025
Alignment:
Q  400 ttatgacatgttcataagttgttttcagctaattt 434  Q
    |||||||||||||||||||||||||||||| ||||    
T  5886991 ttatgacatgttcataagttgttttcagcttattt 5887025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 395 - 477
Target Start/End: Complemental strand, 10809423 - 10809341
Alignment:
Q  395 acaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagctt 477  Q
    |||| |||||||||||| ||||  ||||||||||| ||||  ||| |||||| || |||| | |||| |||||||||||||||    
T  10809423 acaacttatgacatgtttataatatgttttcagcttattttcataagttctccaatatagctgatgagaacaacttatagctt 10809341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 456 - 514
Target Start/End: Original strand, 28467360 - 28467418
Alignment:
Q  456 ttatgaaaacaacttatagcttttttgaaaacatttcgactctattttatcttttgtta 514  Q
    ||||||||||||||| |||||| | |||||| | || |||| |||||||||||||||||    
T  28467360 ttatgaaaacaacttgtagcttatatgaaaataatttgactttattttatcttttgtta 28467418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 460 - 534
Target Start/End: Original strand, 36151562 - 36151636
Alignment:
Q  460 gaaaacaacttatagcttttttgaaaacatttcgactctattttatcttttgttaatgaaataacttaaacataa 534  Q
    |||||||| ||||| ||| |  ||||||| || |||| ||||||||||||||||| ||||||| |||| ||||||    
T  36151562 gaaaacaatttataacttatacgaaaacaatttgactttattttatcttttgttattgaaatagcttatacataa 36151636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 381 - 434
Target Start/End: Complemental strand, 4482022 - 4481969
Alignment:
Q  381 gagaacttacgaaaacaaattatgacatgttcataagttgttttcagctaattt 434  Q
    ||||||||| |||||||| |||| ||||||||||||| |||||| |||| ||||    
T  4482022 gagaacttatgaaaacaacttattacatgttcataagctgtttttagcttattt 4481969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 400 - 473
Target Start/End: Complemental strand, 6292566 - 6292493
Alignment:
Q  400 ttatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttata 473  Q
    |||||||||||||||||| ||||||||||| ||||  ||| | |||| ||||||| ||| ||||| | ||||||    
T  6292566 ttatgacatgttcataagctgttttcagcttattttcataagctctccaaaatagtttacgaaaatagcttata 6292493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 451 - 504
Target Start/End: Original strand, 25006082 - 25006135
Alignment:
Q  451 ataggttatgaaaacaacttatagcttttttgaaaacatttcgactctatttta 504  Q
    |||| |||||||||||||||||||||| | |||||||| || |||| |||||||    
T  25006082 atagcttatgaaaacaacttatagcttatatgaaaacaatttgactttatttta 25006135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 513
Target Start/End: Original strand, 33527200 - 33527257
Alignment:
Q  456 ttatgaaaacaacttatagcttttttgaaaacatttcgactctattttatcttttgtt 513  Q
    ||||||||||| ||||||| || | |||||||| || |||| ||||||||||||||||    
T  33527200 ttatgaaaacagcttatagattatatgaaaacagtttgactgtattttatcttttgtt 33527257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 407 - 476
Target Start/End: Complemental strand, 35351105 - 35351036
Alignment:
Q  407 atgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagct 476  Q
    ||||| ||||||||||||||||| |||| | || | ||||||  |||| ||||||| |||||||||||||    
T  35351105 atgtttataagttgttttcagcttatttttgtaagctctctaggatagtttatgaagacaacttatagct 35351036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 451 - 511
Target Start/End: Complemental strand, 44940363 - 44940305
Alignment:
Q  451 ataggttatgaaaacaacttatagcttttttgaaaacatttcgactctattttatcttttg 511  Q
    |||| |||||||||||||||||| ||| |||||||||| |  |||| ||||||||||||||    
T  44940363 atagattatgaaaacaacttataacttatttgaaaacagt--gactttattttatcttttg 44940305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 441 - 510
Target Start/End: Complemental strand, 49888799 - 49888730
Alignment:
Q  441 gttctctaaaataggttatgaaaacaacttatagcttttttgaaaacatttcgactctattttatctttt 510  Q
    ||||||||| |||| |||||||||||||| ||||||| |  ||||||| ||  ||| |||||||||||||    
T  49888799 gttctctaagatagcttatgaaaacaactaatagcttatacgaaaacaattaaactttattttatctttt 49888730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 5e-21; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 53 - 149
Target Start/End: Complemental strand, 32368210 - 32368114
Alignment:
Q  53 agcaaaaacgaacctgagtaaagtcgaagtacgattgagatgccatgggacataggaccgtacaatcctacgaaccagcactcgatcctgactacaa 149  Q
    ||||||||||||| ||||||||||||||| ||  |||||||||| |||||| ||||  ||||| ||||||||||||||||||||| || ||||||||    
T  32368210 agcaaaaacgaacatgagtaaagtcgaagcacagttgagatgccgtgggacgtagggtcgtacgatcctacgaaccagcactcgacccggactacaa 32368114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 405 - 513
Target Start/End: Complemental strand, 38010782 - 38010674
Alignment:
Q  405 acatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttttgaaaacatttcgactctatttta 504  Q
    ||||||||||||| |||||| |||| ||||| ||| ||||||||  |||| ||||||||||| |||||||||| | |||||||| || | || | |||||    
T  38010782 acatgttcataagctgtttttagcttatttccataagttctctaggatagattatgaaaacagcttatagcttatatgaaaacaatttggctttgtttta 38010683  T
Q  505 tcttttgtt 513  Q
    |||||||||    
T  38010682 tcttttgtt 38010674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 53 - 149
Target Start/End: Complemental strand, 23636789 - 23636693
Alignment:
Q  53 agcaaaaacgaacctgagtaaagtcgaagtacgattgagatgccatgggacataggaccgtacaatcctacgaaccagcactcgatcctgactacaa 149  Q
    ||||||||| |||||| |||||||||||| ||||||||| |||| | |||| |   |  |||| | |||||||||||||||||||||||||||||||    
T  23636789 agcaaaaacaaacctgggtaaagtcgaagcacgattgaggtgccgttggacgtcaaattgtacgaacctacgaaccagcactcgatcctgactacaa 23636693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 381 - 527
Target Start/End: Complemental strand, 30535655 - 30535509
Alignment:
Q  381 gagaacttacgaaaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttt 480  Q
    ||||||||| |||||||| |||||| |||||| |||| ||||||||| | ||||  ||| ||||| ||| |||| ||||| ||||| ||||||| || |     
T  30535655 gagaacttatgaaaacaacttatgatatgttcgtaagctgttttcaggttattttcatatgttctataagatagcttatggaaacagcttatagattata 30535556  T
Q  481 tgaaaacatttcgactctattttatcttttgttaatgaaataactta 527  Q
     ||||||| ||| | |  ||||||||||||||||  ||| |||||||    
T  30535555 cgaaaacacttcaatttaattttatcttttgttatagaagtaactta 30535509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 400 - 514
Target Start/End: Original strand, 44151477 - 44151591
Alignment:
Q  400 ttatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttttgaaaacatttcgactcta 499  Q
    ||||||||||| |||||| ||||||||||| ||||| ||| | | |  || |||| |||||||||||||||||||||| | || ||||| ||  ||| ||    
T  44151477 ttatgacatgtccataagatgttttcagcttatttccataagcttttcaagatagtttatgaaaacaacttatagcttatatggaaacagttttacttta 44151576  T
Q  500 ttttatcttttgtta 514  Q
    || ||||||||||||    
T  44151577 ttctatcttttgtta 44151591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 393 - 534
Target Start/End: Original strand, 48157110 - 48157251
Alignment:
Q  393 aaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttttgaaaacatttc 492  Q
    |||||| ||||| ||||| |||||| ||||||||||| ||||| ||| | ||||   ||||| || ||||||||| ||||||||| | | |||||| ||     
T  48157110 aaacaacttatgccatgtccataagctgttttcagcttatttccataagatctcccgaatagcttgtgaaaacaaattatagcttatattaaaacaattt 48157209  T
Q  493 gactctattttatcttttgttaatgaaataacttaaacataa 534  Q
     ||| ||||||||||||| |||  ||||||| ||| ||||||    
T  48157210 cactttattttatcttttattatagaaataagttatacataa 48157251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 381 - 473
Target Start/End: Complemental strand, 19719098 - 19719007
Alignment:
Q  381 gagaacttacgaaaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttata 473  Q
    ||||||||| |||||||| |||||||||||||||||  ||||||||||| || | |||| ||  || || ||| |||||||||||||||||||    
T  19719098 gagaacttatgaaaacaacttatgacatgttcataaactgttttcagcttatctttataagtgatccaagata-gttatgaaaacaacttata 19719007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 407 - 474
Target Start/End: Original strand, 2825235 - 2825302
Alignment:
Q  407 atgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatag 474  Q
    ||||||||||||| ||||||||| ||||| ||| ||||||||  |||| || ||||||||||||||||    
T  2825235 atgttcataagttattttcagcttatttccataagttctctaggatagcttgtgaaaacaacttatag 2825302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 379 - 488
Target Start/End: Complemental strand, 46082130 - 46082019
Alignment:
Q  379 atgagaacttacgaaaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaatag-gt-tatgaaaacaacttatagct 476  Q
    |||||| |||| |||||||| ||||||||||  |||||||||||||||||| ||||  ||| | |||| | ||||| || ||||||||||||||||| ||    
T  46082130 atgagagcttatgaaaacaacttatgacatgaccataagttgttttcagcttattttcataagctctccagaatagcgtctatgaaaacaacttataact 46082031  T
Q  477 tttttgaaaaca 488  Q
    | | ||||||||    
T  46082030 tatatgaaaaca 46082019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 403 - 474
Target Start/End: Original strand, 47559601 - 47559672
Alignment:
Q  403 tgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatag 474  Q
    ||||||||||||||||||||||| ||| ||||  ||| |||||| ||||||  ||||||||||| |||||||    
T  47559601 tgacatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatag 47559672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 456 - 514
Target Start/End: Complemental strand, 1417281 - 1417223
Alignment:
Q  456 ttatgaaaacaacttatagcttttttgaaaacatttcgactctattttatcttttgtta 514  Q
    ||||||||||||||||| |||| | |||||||| || |||| |||||||||||||||||    
T  1417281 ttatgaaaacaacttattgcttatatgaaaacaatttgactttattttatcttttgtta 1417223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 393 - 435
Target Start/End: Original strand, 9423584 - 9423626
Alignment:
Q  393 aaacaaattatgacatgttcataagttgttttcagctaatttc 435  Q
    |||||| |||||||||||||||||||||||||||||| |||||    
T  9423584 aaacaatttatgacatgttcataagttgttttcagcttatttc 9423626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 403 - 509
Target Start/End: Original strand, 24363601 - 24363707
Alignment:
Q  403 tgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttttgaaaacatttcgactctattt 502  Q
    |||||||| |||||||||||||||||| ||||| |||   |||| |  |||| |||||||||||||||||| | | | |||||| |  | ||||||||||    
T  24363601 tgacatgtccataagttgttttcagcttatttccataacctctccaggatagcttatgaaaacaacttataacctgtatgaaaatagattgactctattt 24363700  T
Q  503 tatcttt 509  Q
    |||||||    
T  24363701 tatcttt 24363707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 527
Target Start/End: Complemental strand, 27548323 - 27548209
Alignment:
Q  413 ataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttttgaaaacatttcgactctattttatcttttgt 512  Q
    ||||||| ||| ||||| || || ||| ||| || || |||| ||||||||||| ||||||||||   |||||||| || |||| ||||||||||||||     
T  27548323 ataagttttttccagcttatctccataagttatccaagatagcttatgaaaacagcttatagcttaaatgaaaacaattagactttattttatcttttgc 27548224  T
Q  513 taatgaaataactta 527  Q
    ||| |||||| ||||    
T  27548223 taaggaaatagctta 27548209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 393 - 466
Target Start/End: Complemental strand, 7244760 - 7244687
Alignment:
Q  393 aaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaaca 466  Q
    |||||| |||||||||| ||||||||||||||||||| ||||  ||| | |||| || |||| |||||||||||    
T  7244760 aaacaatttatgacatgctcataagttgttttcagcttattttcataagctctccaatatagcttatgaaaaca 7244687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 402 - 534
Target Start/End: Original strand, 3610739 - 3610871
Alignment:
Q  402 atgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttttgaaaacatttcgactctatt 501  Q
    ||||||||| ||||||   ||||||||| ||||||||| | ||||||  |||| ||| |||||||||||||||||| |   |||||| || | ||  |||    
T  3610739 atgacatgtccataagcctttttcagcttatttctataagctctctaggatagtttacgaaaacaacttatagcttataccaaaacagtttgccttcatt 3610838  T
Q  502 ttatcttttgttaatgaaataacttaaacataa 534  Q
    ||||||||||||   |||||| |||| ||||||    
T  3610839 ttatcttttgttgtagaaatagcttatacataa 3610871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 381 - 488
Target Start/End: Original strand, 19022562 - 19022670
Alignment:
Q  381 gagaacttacgaaaacaaattatgaca-tgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagctttt 479  Q
    ||||| ||| |||||||| |||||||| | |||||||||||| |||| || ||||  ||| |||||| || |||| |||| ||||||||||||||| |||    
T  19022562 gagaatttatgaaaacaacttatgacaattttcataagttgtcttcaacttattttcataagttctccaatatagcttataaaaacaacttatagcattt 19022661  T
Q  480 ttgaaaaca 488  Q
     | ||||||    
T  19022662 attaaaaca 19022670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 391 - 435
Target Start/End: Original strand, 20888382 - 20888426
Alignment:
Q  391 gaaaacaaattatgacatgttcataagttgttttcagctaatttc 435  Q
    |||||||| ||||| |||||||||||||||||||||||| |||||    
T  20888382 gaaaacaacttatgccatgttcataagttgttttcagcttatttc 20888426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 384 - 488
Target Start/End: Original strand, 25670567 - 25670671
Alignment:
Q  384 aacttacgaaaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttttga 483  Q
    |||||| |||||||| |||||||||||| |||| |||||||||||| ||||  | | | |||| || ||| ||||| ||||||| | ||||||| | |||    
T  25670567 aacttatgaaaacaacttatgacatgttaataaattgttttcagcttattttcacaagctctccaagatatgttataaaaacaattgatagcttatatga 25670666  T
Q  484 aaaca 488  Q
    |||||    
T  25670667 aaaca 25670671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 381 - 429
Target Start/End: Complemental strand, 36538000 - 36537952
Alignment:
Q  381 gagaacttacgaaaacaaattatgacatgttcataagttgttttcagct 429  Q
    ||||||||| | |||||| ||||||||||||||||||||||||| ||||    
T  36538000 gagaacttatggaaacaacttatgacatgttcataagttgtttttagct 36537952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 381 - 476
Target Start/End: Complemental strand, 39968013 - 39967917
Alignment:
Q  381 gagaacttacgaaaacaaattatgacat-gttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagct 476  Q
    ||||||||| |||||||  ||||| ||| ||||||||| |||||||| || ||||  ||  ||||||| | |||| |||||||||||||||||||||    
T  39968013 gagaacttatgaaaacagcttatggcattgttcataagctgttttcaacttattttcattagttctctcagatagcttatgaaaacaacttatagct 39967917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 53 - 141
Target Start/End: Original strand, 46082472 - 46082560
Alignment:
Q  53 agcaaaaacgaacctgagtaaagtcgaagtacgattgagatgccatgggacataggaccgtacaatcctacgaaccagcactcgatcct 141  Q
    |||||||||||| | |||||||||||||| ||| ||||| |||   ||||||||| | ||||| |||||| || |||||||| ||||||    
T  46082472 agcaaaaacgaatcggagtaaagtcgaagcacggttgaggtgcggagggacatagaatcgtacgatcctatgagccagcactggatcct 46082560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 382 - 429
Target Start/End: Complemental strand, 11048118 - 11048071
Alignment:
Q  382 agaacttacgaaaacaaattatgacatgttcataagttgttttcagct 429  Q
    ||||||||  ||||||| |||||||||||||||||| |||||||||||    
T  11048118 agaacttatcaaaacaacttatgacatgttcataagctgttttcagct 11048071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 400 - 439
Target Start/End: Complemental strand, 35267435 - 35267396
Alignment:
Q  400 ttatgacatgttcataagttgttttcagctaatttctata 439  Q
    |||||||||||||||| ||||||||||||| |||||||||    
T  35267435 ttatgacatgttcataggttgttttcagcttatttctata 35267396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 456 - 514
Target Start/End: Original strand, 5006562 - 5006620
Alignment:
Q  456 ttatgaaaacaacttatagcttttttgaaaacatttcgactctattttatcttttgtta 514  Q
    |||||||||||| ||||| ||| | |||||||| || |||| |||||||||||||||||    
T  5006562 ttatgaaaacaatttataccttatatgaaaacagtttgactttattttatcttttgtta 5006620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 456 - 514
Target Start/End: Original strand, 9527143 - 9527201
Alignment:
Q  456 ttatgaaaacaacttatagcttttttgaaaacatttcgactctattttatcttttgtta 514  Q
    ||||||||||||||||||| || | |||||||| || |||| |||| ||||||||||||    
T  9527143 ttatgaaaacaacttatagtttatatgaaaacagtttgactttattatatcttttgtta 9527201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 386 - 508
Target Start/End: Complemental strand, 12110447 - 12110325
Alignment:
Q  386 cttacgaaaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttttgaaa 485  Q
    |||| |||||||| |||||||||||||| ||  |||||| || | ||||  ||| |||||  || |||| ||||||||||| |||||||||| |   |||    
T  12110447 cttatgaaaacaacttatgacatgttcacaaactgtttttagattattttcataagttcttcaagatagcttatgaaaacagcttatagcttataccaaa 12110348  T
Q  486 acatttcgactctattttatctt 508  Q
    ||| || |||| |||||||||||    
T  12110347 acaatttgactttattttatctt 12110325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 382 - 424
Target Start/End: Original strand, 15740390 - 15740432
Alignment:
Q  382 agaacttacgaaaacaaattatgacatgttcataagttgtttt 424  Q
    |||||||| |||||||| |||||||||||||||||| ||||||    
T  15740390 agaacttatgaaaacaacttatgacatgttcataagctgtttt 15740432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 451 - 513
Target Start/End: Original strand, 30456498 - 30456560
Alignment:
Q  451 ataggttatgaaaacaacttatagcttttttgaaaacatttcgactctattttatcttttgtt 513  Q
    |||| |||||||||| ||||||| ||| | |||||||| || |||| ||||||||||||||||    
T  30456498 atagtttatgaaaaccacttataacttatatgaaaacaatttgactttattttatcttttgtt 30456560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 382 - 467
Target Start/End: Complemental strand, 34036009 - 34035923
Alignment:
Q  382 agaacttacgaaaacaaattatgacat-gttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaa 467  Q
    |||||||| ||||| || ||||||||| |||||||||||||||||| || ||||    | ||||||||| |||| ||||||||||||    
T  34036009 agaacttatgaaaataacttatgacattgttcataagttgttttcaacttattttcgcaagttctctaagatagcttatgaaaacaa 34035923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 404 - 477
Target Start/End: Complemental strand, 20553172 - 20553099
Alignment:
Q  404 gacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagctt 477  Q
    |||||||||||||||||||||||| | ||||| ||| | || |||  |||  || |||||||||||||||||||    
T  20553172 gacatgttcataagttgttttcagattatttccataagctcactaggataacttgtgaaaacaacttatagctt 20553099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 386 - 439
Target Start/End: Original strand, 45859510 - 45859562
Alignment:
Q  386 cttacgaaaacaaattatgacatgttcataagttgttttcagctaatttctata 439  Q
    |||||| ||||||  ||||||||||||||| ||||||||||||| |||||||||    
T  45859510 cttacggaaacaacatatgacatgttcata-gttgttttcagcttatttctata 45859562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 2e-20; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 6 - 149
Target Start/End: Complemental strand, 36881662 - 36881520
Alignment:
Q  6 aaaacagagaaaatagagtaagaacagatgaaacaaaggagaatcaaagcaaaaacgaacctgagtaaagtcgaagtacgattgagatgccatgggacat 105  Q
    ||||||||||||| |||  || ||||||  ||||| |||| || || |||||||||||||||||||||||| |||| || |||||| |||| |||||| |    
T  36881662 aaaacagagaaaacagaagaaaaacagagcaaacagaggaaaa-cagagcaaaaacgaacctgagtaaagttgaagcacaattgaggtgccttgggacgt 36881564  T
Q  106 aggaccgtacaatcctacgaaccagcactcgatcctgactacaa 149  Q
    |||| || || ||||||| ||||||||||| ||||||| |||||    
T  36881563 aggatcgaacgatcctacaaaccagcactctatcctgaatacaa 36881520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 382 - 426
Target Start/End: Original strand, 779040 - 779084
Alignment:
Q  382 agaacttacgaaaacaaattatgacatgttcataagttgttttca 426  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  779040 agaacttacgaaaacaacttatgacatgttcataagttgttttca 779084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 382 - 440
Target Start/End: Complemental strand, 3254316 - 3254258
Alignment:
Q  382 agaacttacgaaaacaaattatgacatgttcataagttgttttcagctaatttctatac 440  Q
    |||||||| |||||||  |||||||||||||||||| ||||||||||| ||||||||||    
T  3254316 agaacttaagaaaacagcttatgacatgttcataagctgttttcagcttatttctatac 3254258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 387 - 508
Target Start/End: Original strand, 2594981 - 2595102
Alignment:
Q  387 ttacgaaaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttttgaaaa 486  Q
    |||| ||||||| |||||||||||||||||||||||||||||| |||   ||| ||| |||||   || ||||||||||||||||| |||  |  |||||    
T  2594981 ttacaaaaacaacttatgacatgttcataagttgttttcagcttattctcataagttgtctaatgcagcttatgaaaacaacttatggctagtacgaaaa 2595080  T
Q  487 catttcgactctattttatctt 508  Q
    || ||  ||| |||||||||||    
T  2595081 caatttaactttattttatctt 2595102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 381 - 508
Target Start/End: Complemental strand, 2482955 - 2482830
Alignment:
Q  381 gagaacttacgaaaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttt 480  Q
    ||||||||| |||||||| | | || | ||||||||| ||||||||||| ||||||||| ||| || || ||||   ||||||||| |||||||||| |     
T  2482955 gagaacttaagaaaacaactcacgataagttcataagctgttttcagcttatttctataagttatccaagatag--catgaaaacagcttatagcttata 2482858  T
Q  481 tgaaaacatttcgactctattttatctt 508  Q
      ||||||||| |||| |||||||||||    
T  2482857 caaaaacattttgactttattttatctt 2482830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 401 - 477
Target Start/End: Original strand, 28769337 - 28769413
Alignment:
Q  401 tatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagctt 477  Q
    ||||| |||| |||||||||||||||||| ||||| |||   |||| ||||||| ||||||||||| ||||||||||    
T  28769337 tatgatatgtccataagttgttttcagcttatttccataaactctccaaaatagcttatgaaaacagcttatagctt 28769413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 382 - 474
Target Start/End: Original strand, 41442432 - 41442524
Alignment:
Q  382 agaacttacgaaaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatag 474  Q
    |||||||| |||||||| |||||||||||||||| | ||||||||||| |  | |||| ||| || || |||| ||||||||||| |||||||    
T  41442432 agaacttatgaaaacaatttatgacatgttcatatgctgttttcagcttacctatataagttttccaatatagcttatgaaaacagcttatag 41442524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 381 - 477
Target Start/End: Complemental strand, 43504843 - 43504747
Alignment:
Q  381 gagaacttacgaaaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagctt 477  Q
    ||||||| | |||||||| ||| ||| |||| ||||| ||||||||||| ||||| ||| |||||| || |||| |||| |||||| ||||||||||    
T  43504843 gagaactgatgaaaacaacttacgacttgtttataagctgttttcagcttatttccataagttctccaagatagcttataaaaacatcttatagctt 43504747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 380 - 470
Target Start/End: Complemental strand, 9572963 - 9572872
Alignment:
Q  380 tgagaacttacgaaaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctcta-aaataggttatgaaaacaactt 470  Q
    |||||||||||||||| || ||||||||||| ||||||||||||| | || || |||||||| | |||| |||||   ||||||||||||||    
T  9572963 tgagaacttacgaaaataacttatgacatgtccataagttgtttttaccttatatctatacgctttctagaaataacctatgaaaacaactt 9572872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 402 - 477
Target Start/End: Complemental strand, 30389170 - 30389095
Alignment:
Q  402 atgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagctt 477  Q
    |||||||||||||||||||||||||||| ||||  ||| ||||||||  | || ||||||||||| | ||||||||    
T  30389170 atgacatgttcataagttgttttcagcttattttcataagttctctaggaaagcttatgaaaacagcgtatagctt 30389095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 381 - 534
Target Start/End: Complemental strand, 10114582 - 10114429
Alignment:
Q  381 gagaacttacgaaaacaaattatgacatgt-tcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagctttt 479  Q
    ||||||||| |||||||| |||| |||| | ||||| | ||||||||||| ||||  ||| |||||| || |||| | ||||||||| |||||||||| |    
T  10114582 gagaacttatgaaaacaacttataacatttatcatatgctgttttcagcttattttcatatgttctccaatatagctaatgaaaacagcttatagcttat 10114483  T
Q  480 ttgaaaacatttcgactctattttatcttttgttaatgaaataacttaaacataa 534  Q
       |||||| ||| ||| |||||||||||||| ||  |||||| |||| ||||||    
T  10114482 accaaaacaattcaact-tattttatcttttgctatagaaatagcttatacataa 10114429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 381 - 434
Target Start/End: Original strand, 32840963 - 32841017
Alignment:
Q  381 gagaacttacgaaaacaaattatgacat-gttcataagttgttttcagctaattt 434  Q
    ||||||||| |||||||| ||||||||| ||||||||||||||||||||| ||||    
T  32840963 gagaacttatgaaaacaacttatgacattgttcataagttgttttcagcttattt 32841017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 412 - 534
Target Start/End: Complemental strand, 38874707 - 38874585
Alignment:
Q  412 cataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttttgaaaacatttcgactctattttatcttttg 511  Q
    |||||| | |||| |||| ||||  ||| |||||| ||||||| ||||||||||| |||| ||||| | |||||| | || ||||| ||||||||||| |    
T  38874707 cataagctatttttagcttattttcatatgttctccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttag 38874608  T
Q  512 ttaatgaaataacttaaacataa 534  Q
    |||  |||| |||||| ||||||    
T  38874607 ttacagaaacaacttatacataa 38874585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 456 - 534
Target Start/End: Complemental strand, 42597418 - 42597340
Alignment:
Q  456 ttatgaaaacaacttatagcttttttgaaaacatttcgactctattttatcttttgttaatgaaataacttaaacataa 534  Q
    ||||||||||||||||||||||   |||||||| ||  ||| |||||||||||||||||  |||||| |||| ||||||    
T  42597418 ttatgaaaacaacttatagcttgcatgaaaacaattttactttattttatcttttgttatagaaatagcttatacataa 42597340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 381 - 426
Target Start/End: Complemental strand, 8629548 - 8629503
Alignment:
Q  381 gagaacttacgaaaacaaattatgacatgttcataagttgttttca 426  Q
    ||||||||| |||||||| |||||||||| ||||||||||||||||    
T  8629548 gagaacttatgaaaacaacttatgacatgatcataagttgttttca 8629503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 408 - 473
Target Start/End: Original strand, 9956819 - 9956884
Alignment:
Q  408 tgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttata 473  Q
    ||||||||||| |||||||||| ||||  ||| |||||| || |||| ||||||||||||||||||    
T  9956819 tgttcataagtagttttcagcttattttcataagttctccaagatagattatgaaaacaacttata 9956884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 451 - 512
Target Start/End: Complemental strand, 34770914 - 34770853
Alignment:
Q  451 ataggttatgaaaacaacttatagcttttttgaaaacatttcgactctattttatcttttgt 512  Q
    |||| ||||||||||||||||||||||   |||||||| || |||| |||||||||||||||    
T  34770914 atagcttatgaaaacaacttatagcttaaatgaaaacaatttgactttattttatcttttgt 34770853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 117 - 149
Target Start/End: Complemental strand, 1469011 - 1468979
Alignment:
Q  117 atcctacgaaccagcactcgatcctgactacaa 149  Q
    |||||||||||||||||||||||||||||||||    
T  1469011 atcctacgaaccagcactcgatcctgactacaa 1468979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 381 - 473
Target Start/End: Complemental strand, 8060761 - 8060669
Alignment:
Q  381 gagaacttacgaaaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttata 473  Q
    |||| |||| ||||||||||||||  | ||||||||||| ||||||||| ||||| ||| | ||||||  || | ||||||||||| ||||||    
T  8060761 gagagcttatgaaaacaaattatggaaagttcataagttattttcagcttatttccataagctctctaggattgcttatgaaaacagcttata 8060669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 451 - 527
Target Start/End: Complemental strand, 29973103 - 29973027
Alignment:
Q  451 ataggttatgaaaacaacttatagcttttttgaaaacatttcgactctattttatcttttgttaatgaaataactta 527  Q
    |||| |||||||||||||||||||||| | |||||| | || |||| ||||||| ||| |||||| |||||| ||||    
T  29973103 atagcttatgaaaacaacttatagcttatgtgaaaatagtttgactttattttaccttgtgttaaagaaatagctta 29973027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 387 - 527
Target Start/End: Complemental strand, 31862579 - 31862439
Alignment:
Q  387 ttacgaaaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttttgaaaa 486  Q
    ||||| || ||| ||||||| | | |||||| ||||||||||| ||||  ||| | ||||||  |||  ||||||||||| |||||||||| |  || ||    
T  31862579 ttacggaagcaacttatgacctatgcataagctgttttcagcttattttcataagctctctaggataacttatgaaaacatcttatagcttatacgagaa 31862480  T
Q  487 catttcgactctattttatcttttgttaatgaaataactta 527  Q
     | || |||| ||| ||||||||||||| ||||||||||||    
T  31862479 tagtttgactttatattatcttttgttattgaaataactta 31862439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 451 - 534
Target Start/End: Original strand, 35298525 - 35298609
Alignment:
Q  451 ataggttatgaaaacaacttatagctttt-ttgaaaacatttcgactctattttatcttttgttaatgaaataacttaaacataa 534  Q
    |||| ||||||||||||||||||| || | ||||||||  || | || ||||||||||||||||| ||||||| |||| ||||||    
T  35298525 atagcttatgaaaacaacttatagtttatattgaaaactgtttggctttattttatcttttgttactgaaatagcttatacataa 35298609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 388 - 448
Target Start/End: Original strand, 41606888 - 41606948
Alignment:
Q  388 tacgaaaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctcta 448  Q
    ||||||||||  |||||||||||||| ||||||||||||||| ||||| ||| | ||||||    
T  41606888 tacgaaaacagcttatgacatgttcaaaagttgttttcagcttatttccataagctctcta 41606948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 391 - 534
Target Start/End: Complemental strand, 9700083 - 9699940
Alignment:
Q  391 gaaaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttttgaaaacatt 490  Q
    |||| ||| ||||||||||| |||||| |||||||| || ||||  ||| | |||||  ||||   |||||||||| ||||||  || |||||||||| |    
T  9700083 gaaatcaatttatgacatgtccataagctgttttcaccttattttcataagctctcttgaataacatatgaaaacagcttataatttatttgaaaacaat 9699984  T
Q  491 tcgactctattttatcttttgttaatgaaataacttaaacataa 534  Q
    | |||  ||||||| |||||||||  |||||| |||| ||||||    
T  9699983 ttgaccttattttaacttttgttatcgaaatagcttatacataa 9699940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 381 - 439
Target Start/End: Complemental strand, 14949958 - 14949900
Alignment:
Q  381 gagaacttacgaaaacaaattatgacatgttcataagttgttttcagctaatttctata 439  Q
    |||| |||| ||||| || ||||||||||| |||||| ||||||||||| |||||||||    
T  14949958 gagagcttatgaaaataacttatgacatgtccataagctgttttcagcttatttctata 14949900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 451 - 533
Target Start/End: Complemental strand, 31884616 - 31884534
Alignment:
Q  451 ataggttatgaaaacaacttatagcttttttgaaaacatttcgactctattttatcttttgttaatgaaataacttaaacata 533  Q
    |||| |||||||||||| ||||||||| | |||||||| ||| | |  ||||||| ||||||||  ||||||||||| |||||    
T  31884616 atagcttatgaaaacaatttatagcttatatgaaaacaattcaatttgattttatattttgttatagaaataacttatacata 31884534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 514
Target Start/End: Original strand, 39866790 - 39866848
Alignment:
Q  457 tatgaaaacaacttatagcttttttgaaaaca-tttcgactctattttatcttttgtta 514  Q
    ||||||||||| |||||| |||| |||||||| ||| |||| |||||||||||||||||    
T  39866790 tatgaaaacaatttatagtttttatgaaaacagttttgactttattttatcttttgtta 39866848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 451 - 532
Target Start/End: Original strand, 1470904 - 1470985
Alignment:
Q  451 ataggttatgaaaacaacttatagcttttttgaaaacatttcgactctattttatcttttgttaatgaaataacttaaacat 532  Q
    |||||||||||||||| |||||||||| | |||||  | || |||| ||||||||||||| |||  |||||| |||| ||||    
T  1470904 ataggttatgaaaacagcttatagcttatatgaaagtaatttgactttattttatcttttattatagaaatagcttatacat 1470985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 381 - 470
Target Start/End: Original strand, 7918424 - 7918513
Alignment:
Q  381 gagaacttacgaaaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaactt 470  Q
    |||| |||| |||||||| ||| |||||||||||||| ||||| || || ||||| ||| | |||| || |||| ||| |||||||||||    
T  7918424 gagagcttatgaaaacaacttaagacatgttcataagctgtttccaacttatttcaataagctctccaagatagcttacgaaaacaactt 7918513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 412 - 477
Target Start/End: Complemental strand, 8062390 - 8062325
Alignment:
Q  412 cataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagctt 477  Q
    |||||| ||||||||||| ||||| |||   ||||||| |||| ||||||||||| ||||||||||    
T  8062390 cataagatgttttcagcttatttccataatctctctaagatagcttatgaaaacagcttatagctt 8062325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 381 - 506
Target Start/End: Complemental strand, 11376795 - 11376670
Alignment:
Q  381 gagaacttacgaaaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttt 480  Q
    ||||||||| ||||| |  || ||||||||| |||  |||||||||||| ||||  |||  ||||||||||||| ||| |||| || |||||||||| |     
T  11376795 gagaacttatgaaaatagcttgtgacatgttaatatcttgttttcagcttattttcatagattctctaaaatagcttaagaaagcatcttatagcttata 11376696  T
Q  481 tgaaaacatttcgactctattttatc 506  Q
    | |||| | || |||| |||||||||    
T  11376695 tcaaaataattagactttattttatc 11376670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 393 - 434
Target Start/End: Original strand, 41620281 - 41620322
Alignment:
Q  393 aaacaaattatgacatgttcataagttgttttcagctaattt 434  Q
    |||||||||||||||||| |||||||||||||| ||| ||||    
T  41620281 aaacaaattatgacatgtccataagttgttttccgcttattt 41620322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 3e-19; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 393 - 514
Target Start/End: Original strand, 9667975 - 9668096
Alignment:
Q  393 aaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttttgaaaacatttc 492  Q
    |||||| ||||||||||| |||||| |||||||| || ||||| ||| | ||||  ||| || |||||||||||| || |||||| | |||||||| |||    
T  9667975 aaacaacttatgacatgtccataagctgttttcaacttatttccataagctctccgaaacagtttatgaaaacaaattgtagcttatatgaaaacaattc 9668074  T
Q  493 gactctattttatcttttgtta 514  Q
    |||||||| |||||||||||||    
T  9668075 gactctatgttatcttttgtta 9668096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 53 - 148
Target Start/End: Original strand, 25101031 - 25101126
Alignment:
Q  53 agcaaaaacgaacctgagtaaagtcgaagtacgattgagatgccatgggacataggaccgtacaatcctacgaaccagcactcgatcctgactaca 148  Q
    |||||||||||||| |||| ||||||||| ||| ||||| |||| |||||||||| | ||||  ||||||||| |||||||||||||||| |||||    
T  25101031 agcaaaaacgaaccggagtgaagtcgaagcacggttgaggtgccgtgggacatagaatcgtaagatcctacgagccagcactcgatcctggctaca 25101126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 393 - 474
Target Start/End: Complemental strand, 2112280 - 2112199
Alignment:
Q  393 aaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatag 474  Q
    |||||| |||||||||||||||||||||||||| | | ||||||||| |  |||||| |||| |||||||||||||||||||    
T  2112280 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatag 2112199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 400 - 514
Target Start/End: Original strand, 281845 - 281959
Alignment:
Q  400 ttatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttttgaaaacatttcgactcta 499  Q
    |||||||||||  ||||||||||||||||| ||||| ||  | ||||||  |||| ||||||| ||| |||||||||| | ||||||||  | |||| ||    
T  281845 ttatgacatgtctataagttgttttcagcttatttccatgagctctctaggatagcttatgaacacagcttatagcttatatgaaaacaagttgacttta 281944  T
Q  500 ttttatcttttgtta 514  Q
    |||||||||||||||    
T  281945 ttttatcttttgtta 281959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 53 - 148
Target Start/End: Original strand, 6539490 - 6539585
Alignment:
Q  53 agcaaaaacgaacctgagtaaagtcgaagtacgattgagatgccatgggacataggaccgtacaatcctacgaaccagcactcgatcctgactaca 148  Q
    |||||||| ||||||||||||||| |||| ||| |||||||| | ||||   ||||| | ||| ||||||||| ||||||||||||||| ||||||    
T  6539490 agcaaaaatgaacctgagtaaagttgaagcacggttgagatgacgtggggtgtaggatcatacgatcctacgatccagcactcgatccttactaca 6539585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 400 - 511
Target Start/End: Complemental strand, 25100116 - 25100005
Alignment:
Q  400 ttatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttttgaaaacatttcgactcta 499  Q
    |||||||||||||||  | | |||||| || ||||||||| | ||| ||| |||| |||||||||||||||||| ||| | |||||||| || |||||||    
T  25100116 ttatgacatgttcatttgctattttcaacttatttctataagctctttaagatagcttatgaaaacaacttataacttctatgaaaacaatttgactcta 25100017  T
Q  500 ttttatcttttg 511  Q
    ||| || |||||    
T  25100016 tttcatattttg 25100005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 393 - 471
Target Start/End: Complemental strand, 4420723 - 4420645
Alignment:
Q  393 aaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaactta 471  Q
    ||||||||||||||||||||||||| ||||||||||| ||||| ||| | |||| || |||| ||| ||||| ||||||    
T  4420723 aaacaaattatgacatgttcataagctgttttcagcttatttccataagctctccaagatagcttaggaaaataactta 4420645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 423 - 528
Target Start/End: Complemental strand, 1403046 - 1402941
Alignment:
Q  423 ttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttttgaaaacatttcgactctattttatcttttgttaatgaaata 522  Q
    ||||||||||||||||| | |||| |  |||| |||||||||||| ||||||||| | |||||| | ||  ||| |||||||||||||||||  ||||||    
T  1403046 ttcagctaatttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaatagtttaactttattttatcttttgttatagaaata 1402947  T
Q  523 acttaa 528  Q
     |||||    
T  1402946 gcttaa 1402941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 400 - 511
Target Start/End: Original strand, 7785741 - 7785850
Alignment:
Q  400 ttatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttttgaaaacatttcgactcta 499  Q
    |||||||||||  ||||||||||||||||| ||||| ||| | |||| |||||||   ||||| |||| ||||||||| | |||||| | || |||| ||    
T  7785741 ttatgacatgtctataagttgttttcagcttatttccataagctctccaaaatag--catgaagacaatttatagcttatatgaaaagagtttgacttta 7785838  T
Q  500 ttttatcttttg 511  Q
    ||||||||||||    
T  7785839 ttttatcttttg 7785850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 381 - 473
Target Start/End: Original strand, 20368158 - 20368250
Alignment:
Q  381 gagaacttacgaaaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttata 473  Q
    ||||||||| |||||||| |||||||||||||||||| |  ||||| || ||||  ||| |||||| || | || ||||||||||||||||||    
T  20368158 gagaacttatgaaaacaacttatgacatgttcataagctagtttcaacttattttcataagttctccaagaaagcttatgaaaacaacttata 20368250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 382 - 477
Target Start/End: Complemental strand, 31624181 - 31624086
Alignment:
Q  382 agaacttacgaaaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagctt 477  Q
    |||||||| |||||||  |||||||||||||||||| |||||||| || ||||  |||  ||||| || ||||  |||||||||| ||||||||||    
T  31624181 agaacttatgaaaacagcttatgacatgttcataagctgttttcaacttattttcataatttctccaagatagcctatgaaaacagcttatagctt 31624086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 149
Target Start/End: Original strand, 18133896 - 18133934
Alignment:
Q  111 cgtacaatcctacgaaccagcactcgatcctgactacaa 149  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  18133896 cgtacaatcctacgagccagcactcgatcctgactacaa 18133934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 386 - 435
Target Start/End: Original strand, 7931709 - 7931758
Alignment:
Q  386 cttacgaaaacaaattatgacatgttcataagttgttttcagctaatttc 435  Q
    |||| |||||||| ||||||||||||| |||||||||||||||| |||||    
T  7931709 cttatgaaaacaacttatgacatgttcttaagttgttttcagcttatttc 7931758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 393 - 514
Target Start/End: Complemental strand, 30523739 - 30523619
Alignment:
Q  393 aaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttttgaaaacatttc 492  Q
    |||||| ||||| |||||||||||| |||||||| ||||||||||||   |||| |  |||| ||||||||| |||||||||||| | |||| ||  ||     
T  30523739 aaacaacttatgccatgttcataagctgttttcaactaatttctataacctctcaaggatagcttatgaaaa-aacttatagcttatatgaagacgattt 30523641  T
Q  493 gactctattttatcttttgtta 514  Q
    |||  ||||||||| |||||||    
T  30523640 gacattattttatcatttgtta 30523619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 386 - 439
Target Start/End: Complemental strand, 30863333 - 30863280
Alignment:
Q  386 cttacgaaaacaaattatgacatgttcataagttgttttcagctaatttctata 439  Q
    |||| |||||||| ||||||||||| |||||||||||||||||| | |||||||    
T  30863333 cttatgaaaacaacttatgacatgtacataagttgttttcagcttacttctata 30863280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 381 - 434
Target Start/End: Original strand, 33832251 - 33832304
Alignment:
Q  381 gagaacttacgaaaacaaattatgacatgttcataagttgttttcagctaattt 434  Q
    ||||||||| |||||||| |||||||||||| |||||||||||| |||| ||||    
T  33832251 gagaacttatgaaaacaacttatgacatgtttataagttgtttttagcttattt 33832304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 451 - 527
Target Start/End: Complemental strand, 4006736 - 4006660
Alignment:
Q  451 ataggttatgaaaacaacttatagcttttttgaaaacatttcgactctattttatcttttgttaatgaaataactta 527  Q
    |||| |||||||||||||||||||||| | | |||||| || |||| ||||||||| |||||||  |||||| ||||    
T  4006736 atagcttatgaaaacaacttatagcttatataaaaacaatttgactttattttatcatttgttatagaaatatctta 4006660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 393 - 489
Target Start/End: Complemental strand, 4246490 - 4246394
Alignment:
Q  393 aaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttttgaaaacat 489  Q
    |||||| | ||||||||| |||||| |||||||| || |||| |||| | |||| | ||||| ||||||||||| ||||||| || | |||||||||    
T  4246490 aaacaactcatgacatgtccataagctgttttcaacttatttttatatgctctccataatagcttatgaaaacagcttatagattatatgaaaacat 4246394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 400 - 439
Target Start/End: Complemental strand, 821498 - 821459
Alignment:
Q  400 ttatgacatgttcataagttgttttcagctaatttctata 439  Q
    ||||||||||||||||||| |||||||||| |||||||||    
T  821498 ttatgacatgttcataagtcgttttcagcttatttctata 821459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 400 - 435
Target Start/End: Complemental strand, 6537020 - 6536985
Alignment:
Q  400 ttatgacatgttcataagttgttttcagctaatttc 435  Q
    |||||||||||||||||||||||||||||| |||||    
T  6537020 ttatgacatgttcataagttgttttcagcttatttc 6536985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 402 - 477
Target Start/End: Original strand, 10476121 - 10476195
Alignment:
Q  402 atgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagctt 477  Q
    |||||||| || ||| |||||||||||| ||||||||| | |||| || |||| |||||||||||||||| |||||    
T  10476121 atgacatgctcgtaaattgttttcagcttatttctata-gctctccaagatagcttatgaaaacaacttacagctt 10476195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 451 - 534
Target Start/End: Complemental strand, 32976000 - 32975917
Alignment:
Q  451 ataggttatgaaaacaacttatagcttttttgaaaacatttcgactctattttatcttttgttaatgaaataacttaaacataa 534  Q
    |||| ||||||||||||||||| |||| | |  ||||| || |||| |||||||| ||||||||  ||||||||||| ||||||    
T  32976000 atagcttatgaaaacaacttattgcttctattgaaacagtttgactttattttatattttgttacagaaataacttatacataa 32975917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 381 - 472
Target Start/End: Complemental strand, 34403947 - 34403856
Alignment:
Q  381 gagaacttacgaaaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttat 472  Q
    ||||| ||| |||||||| |||||||||||||||||| |||||||| || ||||| ||| | ||| ||  | || ||||||||||| |||||    
T  34403947 gagaagttaagaaaacaacttatgacatgttcataaggtgttttcaccttatttccataagctctttagtacagcttatgaaaacatcttat 34403856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 382 - 424
Target Start/End: Complemental strand, 1575986 - 1575944
Alignment:
Q  382 agaacttacgaaaacaaattatgacatgttcataagttgtttt 424  Q
    |||||||| |||||||| |||||||||||||||||| ||||||    
T  1575986 agaacttatgaaaacaacttatgacatgttcataagctgtttt 1575944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 456 - 510
Target Start/End: Original strand, 3204595 - 3204649
Alignment:
Q  456 ttatgaaaacaacttatagcttttttgaaaacatttcgactctattttatctttt 510  Q
    |||||||||||| || |||||| | |||||||| ||||||| |||||||||||||    
T  3204595 ttatgaaaacaatttctagcttatatgaaaacagttcgactttattttatctttt 3204649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 391 - 437
Target Start/End: Complemental strand, 4080998 - 4080952
Alignment:
Q  391 gaaaacaaattatgacatgttcataagttgttttcagctaatttcta 437  Q
    |||||||| ||||| ||||||||||||||||||||| || |||||||    
T  4080998 gaaaacaacttatgccatgttcataagttgttttcaacttatttcta 4080952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 400 - 466
Target Start/End: Complemental strand, 6647460 - 6647394
Alignment:
Q  400 ttatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaaca 466  Q
    |||||||||||||||||| |||||||| || ||||  ||| | ||||||| |||| |||||||||||    
T  6647460 ttatgacatgttcataagatgttttcaacttattttcataagctctctaagatagcttatgaaaaca 6647394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 111 - 149
Target Start/End: Original strand, 23890008 - 23890046
Alignment:
Q  111 cgtacaatcctacgaaccagcactcgatcctgactacaa 149  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  23890008 cgtacgatcctacgagccagcactcgatcctgactacaa 23890046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 456 - 534
Target Start/End: Original strand, 29274282 - 29274360
Alignment:
Q  456 ttatgaaaacaacttatagcttttttgaaaacatttcgactctattttatcttttgttaatgaaataacttaaacataa 534  Q
    |||||||||||  ||||||||| | |||||||| || |||| |||||||||||||| ||  |||||| |||| ||||||    
T  29274282 ttatgaaaacagtttatagcttatatgaaaacaatttgactttattttatcttttgctatagaaatagcttatacataa 29274360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 408 - 477
Target Start/End: Original strand, 9109256 - 9109325
Alignment:
Q  408 tgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagctt 477  Q
    ||||||||||||||||||| || ||||  ||| |||||| ||| ||| | ||||||||| ||||||||||    
T  9109256 tgttcataagttgttttcaccttattttcataggttctccaaattagttaatgaaaacagcttatagctt 9109325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 381 - 426
Target Start/End: Complemental strand, 10657494 - 10657449
Alignment:
Q  381 gagaacttacgaaaacaaattatgacatgttcataagttgttttca 426  Q
    ||||| ||| |||||||| |||| ||||||||||||||||||||||    
T  10657494 gagaatttatgaaaacaatttataacatgttcataagttgttttca 10657449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 391 - 436
Target Start/End: Complemental strand, 22743563 - 22743518
Alignment:
Q  391 gaaaacaaattatgacatgttcataagttgttttcagctaatttct 436  Q
    |||||||| |||| ||||||||||||| ||||||||||| ||||||    
T  22743563 gaaaacaacttattacatgttcataagctgttttcagcttatttct 22743518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 400 - 534
Target Start/End: Complemental strand, 27649 - 27515
Alignment:
Q  400 ttatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttttgaaaacatttcgactcta 499  Q
    ||||||||||   ||||||||||||||||| ||||| | ||| |  | || |||| ||||||||||||||||||| || | |||||||| || |||| ||    
T  27649 ttatgacatggctataagttgttttcagcttatttccacacgcttaccaagatagtttatgaaaacaacttatagtttatatgaaaacaatttgacttta 27550  T
Q  500 ttttatcttttgttaatgaaataacttaaacataa 534  Q
    ||||||||| |||||  ||||||||||| ||||||    
T  27549 ttttatcttctgttatagaaataacttatacataa 27515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 400 - 514
Target Start/End: Original strand, 52440659 - 52440773
Alignment:
Q  400 ttatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttttgaaaacatttcgactcta 499  Q
    ||||||||||||||||||||||||||| |||||||  ||| |||||  || |||  ||||||||| | |||||||||| |||||||||| || || |  |    
T  52440659 ttatgacatgttcataagttgttttcaactaattttcataagttcttcaagataaattatgaaaatagcttatagcttatttgaaaacaatttgatttga 52440758  T
Q  500 ttttatcttttgtta 514  Q
    |||||| ||||||||    
T  52440759 ttttatattttgtta 52440773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 401 - 474
Target Start/End: Original strand, 33883748 - 33883821
Alignment:
Q  401 tatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatag 474  Q
    ||||||||||||||||||||||||||||| ||||  ||| ||||||||| |||| ||||| ||||||| |||||    
T  33883748 tatgacatgttcataagttgttttcagcttattttcataagttctctaagatagcttatgtaaacaacatatag 33883821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 53 - 148
Target Start/End: Complemental strand, 7227232 - 7227137
Alignment:
Q  53 agcaaaaacgaacctgagtaaagtcgaagtacgattgagatgccatgggacataggaccgtacaatcctacgaaccagcactcgatcctgactaca 148  Q
    |||||||||||||| |||||||||||||| | | | ||| |||  |||||| ||| | |||||||||||| || ||||||||| ||||||||||||    
T  7227232 agcaaaaacgaaccggagtaaagtcgaagcatggtcgaggtgctgtgggacgtagaatcgtacaatcctaagagccagcactcaatcctgactaca 7227137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 451 - 534
Target Start/End: Original strand, 40122801 - 40122883
Alignment:
Q  451 ataggttatgaaaacaacttatagcttttttgaaaacatttcgactctattttatcttttgttaatgaaataacttaaacataa 534  Q
    |||| |||| |||||||||||||||||| | ||||||| || |||| ||||||||||||||||| ||||||| |||| ||||||    
T  40122801 atagcttataaaaacaacttatagctttat-gaaaacagtttgactttattttatcttttgttattgaaatagcttatacataa 40122883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 400 - 510
Target Start/End: Original strand, 12923322 - 12923432
Alignment:
Q  400 ttatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttttgaaaacatttcgactcta 499  Q
    ||||||||||| |||||||||||||||||| |||| || | ||| |||||  ||  ||| |||||||||||||||||| |  |||| || || |||| ||    
T  12923322 ttatgacatgtccataagttgttttcagcttatttatagaagttttctaaggtaacttaggaaaacaacttatagcttataagaaagcagtttgacttta 12923421  T
Q  500 ttttatctttt 510  Q
    |||||||||||    
T  12923422 ttttatctttt 12923432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 381 - 473
Target Start/End: Complemental strand, 21367760 - 21367667
Alignment:
Q  381 gagaacttacgaaaacaaattatgacat-gttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttata 473  Q
    ||||||||| |||||||  ||||||||| ||||| ||| ||||||||||| ||||  ||| |||||| || |||| ||||||||||||||||||    
T  21367760 gagaacttatgaaaacagcttatgacattgttcacaagctgttttcagcttattttcataagttctccaagatagcttatgaaaacaacttata 21367667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 413 - 534
Target Start/End: Complemental strand, 27792932 - 27792811
Alignment:
Q  413 ataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttttgaaaacatttcgactctattttatcttttgt 512  Q
    ||||||||||||||||| ||||||||| | |||  |  |||| |||||||||||||||  ||||| | |||||| | || |||  |||||||||||||||    
T  27792932 ataagttgttttcagcttatttctataagctctacatgatagtttatgaaaacaacttgcagcttatatgaaaatagtttgaccttattttatcttttgt 27792833  T
Q  513 taatgaaataacttaaacataa 534  Q
    |  ||||||| |||| ||||||    
T  27792832 ttttgaaatagcttatacataa 27792811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 380 - 429
Target Start/End: Original strand, 30573891 - 30573940
Alignment:
Q  380 tgagaacttacgaaaacaaattatgacatgttcataagttgttttcagct 429  Q
    |||||||||| |||||||||||||| |||||||||||| |||||||||||    
T  30573891 tgagaacttatgaaaacaaattatggcatgttcataagctgttttcagct 30573940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 393 - 466
Target Start/End: Complemental strand, 37273214 - 37273141
Alignment:
Q  393 aaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaaca 466  Q
    |||||| ||||||||||| ||||||||||||||| || ||||| ||| |||||| || |||| |||||||||||    
T  37273214 aaacaacttatgacatgtccataagttgttttcaacttatttccataagttctccaagatagcttatgaaaaca 37273141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 381 - 505
Target Start/End: Original strand, 19679306 - 19679430
Alignment:
Q  381 gagaacttacgaaaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttt 480  Q
    |||||||||||||||||| |||||||||| | | ||| ||||| ||||| |||||| |    |||| || |||| |||| ||||||||||||||||| |     
T  19679306 gagaacttacgaaaacaacttatgacatgctaaaaagctgtttgcagcttatttcttttaactctccaagatagtttataaaaacaacttatagcttata 19679405  T
Q  481 tgaaaacatttcgactctattttat 505  Q
     ||||||| || |||| ||||||||    
T  19679406 agaaaacagtttgactttattttat 19679430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 400 - 512
Target Start/End: Original strand, 36646379 - 36646491
Alignment:
Q  400 ttatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttttgaaaacatttcgactcta 499  Q
    ||||| ||||| |||||| |||||||| || |||||||||   ||||||  |||| |||||||||||| ||||| ||| | |||||||| ||  ||| ||    
T  36646379 ttatggcatgtccataagctgttttcatcttatttctataaactctctaggatagcttatgaaaacaagttataacttatatgaaaacaattatacttta 36646478  T
Q  500 ttttatcttttgt 512  Q
    |||||||||||||    
T  36646479 ttttatcttttgt 36646491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 393 - 477
Target Start/End: Complemental strand, 43115136 - 43115052
Alignment:
Q  393 aaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagctt 477  Q
    |||||| ||||||||||| ||||| |||||||||||| ||||| ||| | |||| |  |||| | ||||||||||||||||||||    
T  43115136 aaacaacttatgacatgtccataacttgttttcagcttatttccataagctctcaatgatagttcatgaaaacaacttatagctt 43115052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 381 - 487
Target Start/End: Original strand, 14548699 - 14548805
Alignment:
Q  381 gagaacttacgaaaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttt 480  Q
    |||| |||| ||||||||  |||||||| || ||| | ||||||||||| ||||| ||| | |||| | ||||  |||||||||||||||||||||| |     
T  14548699 gagagcttatgaaaacaacgtatgacattttaataggctgttttcagcttatttccataagctctccagaataacttatgaaaacaacttatagcttata 14548798  T
Q  481 tgaaaac 487  Q
    |||||||    
T  14548799 tgaaaac 14548805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 148
Target Start/End: Complemental strand, 50064012 - 50063918
Alignment:
Q  54 gcaaaaacgaacctgagtaaagtcgaagtacgattgagatgccatgggacataggaccgtacaatcctacgaaccagcactcgatcctgactaca 148  Q
    ||||||||||||| |||| |||||||||  || ||||| |||| ||| || ||| | ||||  ||||||||| |||||||||||||||| |||||    
T  50064012 gcaaaaacgaaccggagtgaagtcgaagctcggttgaggtgccgtggcacgtagaatcgtaagatcctacgagccagcactcgatcctggctaca 50063918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 381 - 510
Target Start/End: Complemental strand, 1816675 - 1816546
Alignment:
Q  381 gagaacttacgaaaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttt 480  Q
    |||||| || ||||| || ||||||||| |||||| | ||||||||||| ||||  ||| | |||| |  |||| |||||||||||||||||| ||| |     
T  1816675 gagaacatatgaaaataacttatgacattttcataggctgttttcagcttattttgataagctctccagtatagcttatgaaaacaacttatatcttata 1816576  T
Q  481 tgaaaacatttcgactctattttatctttt 510  Q
      |||||| || |||| |||||||||||||    
T  1816575 caaaaacagtttgactttattttatctttt 1816546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 380 - 473
Target Start/End: Complemental strand, 36887597 - 36887504
Alignment:
Q  380 tgagaacttacgaaaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttata 473  Q
    ||||||||||  |||| || || ||||||||||||||| ||||||||||| ||||  ||| |||||  || || | ||||||||||||||||||    
T  36887597 tgagaacttatcaaaagaacttttgacatgttcataagatgttttcagcttattttcataagttcttcaagatggcttatgaaaacaacttata 36887504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 449 - 534
Target Start/End: Complemental strand, 37788884 - 37788800
Alignment:
Q  449 aaataggttatgaaaacaacttatagcttttttgaaaacatttcgactctattttatcttttgttaatgaaataacttaaacataa 534  Q
    |||||| ||||||||||||||||||| || |  ||||| | || |||| |||||||||||||||| || |||||||||| ||||||    
T  37788884 aaatagcttatgaaaacaacttatagattatacgaaaataattggactttattttatcttttgtt-ataaaataacttatacataa 37788800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 398 - 511
Target Start/End: Complemental strand, 38462356 - 38462243
Alignment:
Q  398 aattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttttgaaaacatttcgactc 497  Q
    ||||||||| ||  |||||||||||||||||| ||||| ||| | | |||   |||| |||||||||||  ||||||| | | |||||||| || ||||     
T  38462356 aattatgacttgaccataagttgttttcagcttatttccataagctatcttggatagcttatgaaaacagtttatagcatatatgaaaacagtttgactt 38462257  T
Q  498 tattttatcttttg 511  Q
    ||||||||||||||    
T  38462256 tattttatcttttg 38462243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 400 - 473
Target Start/End: Original strand, 39602207 - 39602280
Alignment:
Q  400 ttatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttata 473  Q
    ||||||||||||||||| ||||||||| || ||||  ||| |||||| || |||| ||||||||||| ||||||    
T  39602207 ttatgacatgttcataaattgttttcaacttattttcataagttctcaaagatagcttatgaaaacagcttata 39602280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 458 - 535
Target Start/End: Original strand, 48364934 - 48365011
Alignment:
Q  458 atgaaaacaacttatagcttttttgaaaacatttcgactctattttatcttttgttaatgaaataacttaaacataat 535  Q
    ||||||||||||||| || |   |||||||| || |||| |||||||||||||||||  ||||||||||| |||||||    
T  48364934 atgaaaacaacttatggcgtaaatgaaaacaatttgactttattttatcttttgttatcgaaataacttatacataat 48365011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 381 - 469
Target Start/End: Complemental strand, 1810069 - 1809981
Alignment:
Q  381 gagaacttacgaaaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaact 469  Q
    |||| |||||| |||||| ||||||||||| ||| |||||||||| ||| ||||||||| |||   ||  |||| ||||||||||||||    
T  1810069 gagagcttacggaaacaacttatgacatgtccatgagttgttttctgcttatttctataagtttcgtaggatagcttatgaaaacaact 1809981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 431 - 527
Target Start/End: Original strand, 10101504 - 10101600
Alignment:
Q  431 atttctatacgttctctaaaataggttatgaaaacaacttatagcttttttgaaaacatttcgactctattttatcttttgttaatgaaataactta 527  Q
    ||||||||| | ||||||| |  | ||||||||||||||| || ||| | |||||||| ||  ||| |||||||||||||||||  |||||||||||    
T  10101504 atttctataagctctctaagagggcttatgaaaacaacttttatcttatatgaaaacaatttaactttattttatcttttgttatagaaataactta 10101600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 431 - 527
Target Start/End: Original strand, 10212429 - 10212525
Alignment:
Q  431 atttctatacgttctctaaaataggttatgaaaacaacttatagcttttttgaaaacatttcgactctattttatcttttgttaatgaaataactta 527  Q
    ||||||||| | ||||||| |  | ||||||||||||||| || ||| | |||||||| ||  ||| |||||||||||||||||  |||||||||||    
T  10212429 atttctataagctctctaagagggcttatgaaaacaacttttatcttatatgaaaacaatttaactttattttatcttttgttatagaaataactta 10212525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 381 - 477
Target Start/End: Original strand, 40880926 - 40881022
Alignment:
Q  381 gagaacttacgaaaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagctt 477  Q
    |||| |||| |||||||| ||||||||||  | ||||||||||| | || |||| ||||  |||||||  |||| |||||||||||| |||||||||    
T  40880926 gagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagctt 40881022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 381 - 488
Target Start/End: Complemental strand, 50952425 - 50952317
Alignment:
Q  381 gagaacttacgaaaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaact-tatagctttt 479  Q
    |||||| ||||||||||  |||||||||||||||||  |||||| |||| ||||| ||| | |||| || |||| |||| | ||||||| |||||||| |    
T  50952425 gagaacgtacgaaaacagcttatgacatgttcataaactgttttaagcttatttccataagctctccaagatagtttattacaacaactatatagcttat 50952326  T
Q  480 ttgaaaaca 488  Q
     ||||||||    
T  50952325 atgaaaaca 50952317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 402 - 473
Target Start/End: Complemental strand, 40665500 - 40665429
Alignment:
Q  402 atgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttata 473  Q
    |||||||||||||||| ||||||||||| |||| |||| | |||| || |||  ||||||||||| ||||||    
T  40665500 atgacatgttcataagctgttttcagcttatttttataagctctccaagataacttatgaaaacatcttata 40665429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 400 - 435
Target Start/End: Original strand, 45432936 - 45432971
Alignment:
Q  400 ttatgacatgttcataagttgttttcagctaatttc 435  Q
    |||||||||||||||||||||||||||||| |||||    
T  45432936 ttatgacatgttcataagttgttttcagcttatttc 45432971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 400 - 514
Target Start/End: Original strand, 20192603 - 20192717
Alignment:
Q  400 ttatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttttgaaaacatttcgactcta 499  Q
    ||||||||||| |||||| |||||||| || ||||| ||| | ||||   |||| ||||  |||||| ||||||| || | |||||||  || |||| ||    
T  20192603 ttatgacatgtccataagctgttttcaactcatttccataagctctcccgaataagttacaaaaacagcttatagattatatgaaaactgtttgacttta 20192702  T
Q  500 ttttatcttttgtta 514  Q
    |||||||||||||||    
T  20192703 ttttatcttttgtta 20192717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 400 - 466
Target Start/End: Original strand, 30923895 - 30923961
Alignment:
Q  400 ttatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaaca 466  Q
    |||||||||||  ||||| ||||||||||| |||||||||   ||||||  ||||||||||||||||    
T  30923895 ttatgacatgtctataagctgttttcagcttatttctataaactctctaggataggttatgaaaaca 30923961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 393 - 435
Target Start/End: Complemental strand, 36200176 - 36200134
Alignment:
Q  393 aaacaaattatgacatgttcataagttgttttcagctaatttc 435  Q
    |||||| ||||||||||| |||||||||||||||||| |||||    
T  36200176 aaacaacttatgacatgtccataagttgttttcagcttatttc 36200134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 384 - 434
Target Start/End: Complemental strand, 41724301 - 41724251
Alignment:
Q  384 aacttacgaaaacaaattatgacatgttcataagttgttttcagctaattt 434  Q
    |||||| | |||||| ||||||||||| |||||||||||||||||| ||||    
T  41724301 aacttatggaaacaacttatgacatgtccataagttgttttcagcttattt 41724251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 393 - 435
Target Start/End: Complemental strand, 42745118 - 42745076
Alignment:
Q  393 aaacaaattatgacatgttcataagttgttttcagctaatttc 435  Q
    |||||| ||||||||||||||||||||||||||| || |||||    
T  42745118 aaacaacttatgacatgttcataagttgttttcatcttatttc 42745076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 382 - 424
Target Start/End: Original strand, 47249465 - 47249507
Alignment:
Q  382 agaacttacgaaaacaaattatgacatgttcataagttgtttt 424  Q
    |||||||| |||||| | |||||||||||||||||||||||||    
T  47249465 agaacttatgaaaaccacttatgacatgttcataagttgtttt 47249507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 400 - 466
Target Start/End: Original strand, 54180777 - 54180843
Alignment:
Q  400 ttatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaaca 466  Q
    ||||||||||| ||||||||||||| |||| |||| |||| | |||| | ||||| |||||||||||    
T  54180777 ttatgacatgtccataagttgtttttagcttatttatataagctctccataatagcttatgaaaaca 54180843  T

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Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 403 - 488
Target Start/End: Original strand, 22214659 - 22214744
Alignment:
Q  403 tgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagcttttttgaaaaca 488  Q
    |||||||| |||||| ||||||||||| |||||  ||   ||||||  |||| ||||||||||||||||||| || | ||||||||    
T  22214659 tgacatgtccataagctgttttcagcttatttccgtaatgtctctaggatagcttatgaaaacaacttataggttatatgaaaaca 22214744  T

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Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 393 - 466
Target Start/End: Complemental strand, 31010482 - 31010409
Alignment:
Q  393 aaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaaca 466  Q
    |||||| ||||||||||| |||||| ||||||||||| | ||| ||| | ||||||  |||||||| |||||||    
T  31010482 aaacaacttatgacatgtccataagctgttttcagcttaattccataagctctctatgataggttacgaaaaca 31010409  T

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Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 381 - 473
Target Start/End: Original strand, 34610783 - 34610876
Alignment:
Q  381 gagaacttacgaaaacaaattatgacat-gttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttata 473  Q
    ||||||||| ||||||   ||||||||| |||||||||| |||||||||| ||||  ||| |||| | || |||| |||||||| |||||||||    
T  34610783 gagaacttatgaaaactgcttatgacattgttcataagtggttttcagctgattttcataagttcgccaagatagcttatgaaagcaacttata 34610876  T

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Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 400 - 429
Target Start/End: Original strand, 44747171 - 44747200
Alignment:
Q  400 ttatgacatgttcataagttgttttcagct 429  Q
    ||||||||||||||||||||||||||||||    
T  44747171 ttatgacatgttcataagttgttttcagct 44747200  T

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Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 382 - 427
Target Start/End: Complemental strand, 45541662 - 45541617
Alignment:
Q  382 agaacttacgaaaacaaattatgacatgttcataagttgttttcag 427  Q
    |||||||| |||||||  |||||||||||||||||| |||||||||    
T  45541662 agaacttatgaaaacagcttatgacatgttcataagctgttttcag 45541617  T

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Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 448 - 477
Target Start/End: Complemental strand, 47217382 - 47217353
Alignment:
Q  448 aaaataggttatgaaaacaacttatagctt 477  Q
    ||||||||||||||||||||||||||||||    
T  47217382 aaaataggttatgaaaacaacttatagctt 47217353  T

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Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 385 - 426
Target Start/End: Complemental strand, 47513741 - 47513700
Alignment:
Q  385 acttacgaaaacaaattatgacatgttcataagttgttttca 426  Q
    ||||| |||||||| |||||||| ||||||||||||||||||    
T  47513741 acttatgaaaacaagttatgacacgttcataagttgttttca 47513700  T

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Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 382 - 471
Target Start/End: Original strand, 54837013 - 54837102
Alignment:
Q  382 agaacttacgaaaacaaattatgacatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaactta 471  Q
    |||| ||| |||||||  ||||||||||||||||| |||||||| ||| |||| |||| | | || || |||| ||||||||| ||||||    
T  54837013 agaatttatgaaaacagcttatgacatgttcataacttgttttccgcttatttttataagctgtccaagatagcttatgaaaataactta 54837102  T

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Target: scaffold0508 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 451 - 534
Target Start/End: Original strand, 9823 - 9906
Alignment:
Q  451 ataggttatgaaaacaacttatagcttttttgaaaacatttcgactctattttatcttttgttaatgaaataacttaaacataa 534  Q
    |||| ||||||||||||| |||| ||| | ||||||| ||| ||||  ||||||| ||||||||  ||||||||||| ||||||    
T  9823 atagattatgaaaacaacctataacttatatgaaaactttttgacttaattttattttttgttatagaaataacttatacataa 9906  T

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Target: scaffold0608 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 381 - 434
Target Start/End: Original strand, 9615 - 9668
Alignment:
Q  381 gagaacttacgaaaacaaattatgacatgttcataagttgttttcagctaattt 434  Q
    ||||||||| |||||||| |||| ||||||||||||| |||||| |||| ||||    
T  9615 gagaacttatgaaaacaacttattacatgttcataagctgtttttagcttattt 9668  T

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Target: scaffold0147 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 380 - 429
Target Start/End: Original strand, 12681 - 12730
Alignment:
Q  380 tgagaacttacgaaaacaaattatgacatgttcataagttgttttcagct 429  Q
    ||||| |||| | |||||| ||||||||||| ||||||||||||||||||    
T  12681 tgagaccttatggaaacaacttatgacatgtccataagttgttttcagct 12730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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