View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15302_low_57 (Length: 346)
Name: NF15302_low_57
Description: NF15302
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15302_low_57 |
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Alignment Details
Target: chr3 (Bit Score: 300; Significance: 1e-169; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 300; E-Value: 1e-169
Query Start/End: Original strand, 11 - 330
Target Start/End: Original strand, 47311396 - 47311715
Alignment:
| Q |
11 |
tatgaaactctaaattaaatcaaatacactcttatttgttgagtgtggttatgaacttattataaccctcacatgcctaacatgactccgagtttgtttc |
110 |
Q |
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| T |
47311396 |
tatgaaactttaaattaaatcaaatacactcttatttgttgagtgtggttatgaacttattataaccctcacatgcctaacatgactccgagtttgtttc |
47311495 |
T |
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| Q |
111 |
accattcgcatcacacctgattcaactataataaaaataatgaaattctcttatacagcataaatggtttattattatctaatacatatgcgaaatcata |
210 |
Q |
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| T |
47311496 |
accattcgcattacacctgattcaactataatgaaaataatgaaattctcttatacagcataaatggtttattattatctaatacatatgcgaaatcata |
47311595 |
T |
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| Q |
211 |
atcagcaagctgagatacacgcattaagacatgacataattaagcttatagtgatgcataagctcgttttgtagagtagaaactagaaaggatagataga |
310 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47311596 |
atcagcaagctgagatacacgcattaagacatgacataattaagcttatagagatacataagctcgttttgtagagtagaaactagaaaggatagataga |
47311695 |
T |
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| Q |
311 |
ttgtgatgctatgcacggat |
330 |
Q |
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| T |
47311696 |
ttgtgatgctatgcacggat |
47311715 |
T |
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