View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15302_low_62 (Length: 334)
Name: NF15302_low_62
Description: NF15302
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15302_low_62 |
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Alignment Details
Target: chr5 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 20 - 322
Target Start/End: Complemental strand, 15643557 - 15643255
Alignment:
| Q |
20 |
aacagcaagagaagaaacagcatcaatatgattcacccatgtatacttcttatgtctccgaacttcaacgtagtttttcgatgaaaaaagcttccaaaaa |
119 |
Q |
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| T |
15643557 |
aacagcaagagaagaaacagcatcaatatgattcacccatgtatacttcttatgtctccgaacttcaacgtagtttttcgatgaaaaaagcttcgaaaaa |
15643458 |
T |
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| Q |
120 |
cgatcattgaatgttggaagtgttgctatgcacttaaacaacttctgttcttgattagtactattactagtcatcgttgtttcgattttccaaacccgga |
219 |
Q |
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| T |
15643457 |
cgatcattgaatgttggaagtgttgctatgcatttaaacagcctctgatcttgattagtactattactagtcatcgttgtctcgattttccaaacacgga |
15643358 |
T |
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| Q |
220 |
ttttatgatcttgatgagcactaaataacatatcattaacaacaatcattgacttaatggttgattttgatccattactgattgctatcaagttgttgat |
319 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
15643357 |
ttttatgatcttgatgagcactaaataacatatcattaacaacaatcattgacttaatggttgattttgatccattactgattgctaccaagttgttgat |
15643258 |
T |
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| Q |
320 |
att |
322 |
Q |
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||| |
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| T |
15643257 |
att |
15643255 |
T |
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