View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15303_low_8 (Length: 251)
Name: NF15303_low_8
Description: NF15303
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15303_low_8 |
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Alignment Details
Target: chr3 (Bit Score: 171; Significance: 6e-92; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 27 - 212
Target Start/End: Complemental strand, 40403551 - 40403365
Alignment:
| Q |
27 |
caaagcaggaaa-caaacctggtctgctatatgactcacagtttccacgcattttccacaatcctcctgcgctttgccttttgaactcgacttatcatac |
125 |
Q |
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| T |
40403551 |
caaagcaggaaagcaaacctggtctgctatatgactcgcattttccacgcattttccacaatcctcctgcgctttgccttttgaactcgacttatcatac |
40403452 |
T |
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| Q |
126 |
tttcgcctcttataagttcgaagacacgtcactccaccagagcccccatcaccagaatcaaacccacctgaacttgccaccccattg |
212 |
Q |
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| T |
40403451 |
tttcgcctcttataagttcgaagacacgtcactccaccagagcccccatcaccagaatcaaacccacctgaacttgccaccccattg |
40403365 |
T |
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