View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15304_low_5 (Length: 333)

Name: NF15304_low_5
Description: NF15304
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15304_low_5
NF15304_low_5
[»] chr3 (33 HSPs)
chr3 (12-218)||(34897733-34897940)
chr3 (196-333)||(1995436-1995573)
chr3 (213-333)||(27033643-27033763)
chr3 (207-281)||(52859272-52859346)
chr3 (252-333)||(2229975-2230056)
chr3 (213-329)||(19830394-19830510)
chr3 (213-333)||(43719910-43720030)
chr3 (214-333)||(44637934-44638052)
chr3 (211-333)||(10474400-10474521)
chr3 (248-333)||(31523666-31523751)
chr3 (252-333)||(34373823-34373904)
chr3 (213-333)||(29586328-29586447)
chr3 (206-333)||(48084811-48084939)
chr3 (258-333)||(34373593-34373668)
chr3 (247-330)||(54911649-54911732)
chr3 (248-333)||(33632815-33632899)
chr3 (248-333)||(42613072-42613157)
chr3 (248-333)||(49679268-49679353)
chr3 (252-333)||(46167385-46167466)
chr3 (213-330)||(51982549-51982665)
chr3 (213-309)||(24754673-24754769)
chr3 (213-309)||(24763670-24763766)
chr3 (287-333)||(34897937-34897983)
chr3 (248-333)||(550814-550899)
chr3 (256-333)||(25285843-25285920)
chr3 (218-325)||(47750274-47750380)
chr3 (248-333)||(40810353-40810439)
chr3 (211-280)||(30235416-30235484)
chr3 (213-318)||(40851781-40851886)
chr3 (299-333)||(27959099-27959133)
chr3 (300-333)||(3009231-3009264)
chr3 (252-333)||(12402958-12403039)
chr3 (249-329)||(47914166-47914246)
[»] chr1 (31 HSPs)
chr1 (205-333)||(39426202-39426330)
chr1 (204-325)||(32887735-32887855)
chr1 (209-333)||(26860010-26860133)
chr1 (213-333)||(26372244-26372362)
chr1 (207-293)||(35534741-35534825)
chr1 (252-333)||(12151759-12151840)
chr1 (213-333)||(50294026-50294146)
chr1 (248-325)||(5047379-5047456)
chr1 (248-333)||(30077642-30077727)
chr1 (213-333)||(32618793-32618911)
chr1 (213-333)||(50484378-50484498)
chr1 (206-326)||(18976260-18976381)
chr1 (248-333)||(52280037-52280122)
chr1 (247-333)||(24977232-24977318)
chr1 (252-309)||(7840681-7840738)
chr1 (202-325)||(5854799-5854921)
chr1 (259-325)||(24413291-24413357)
chr1 (283-333)||(46608410-46608460)
chr1 (264-333)||(12380924-12380993)
chr1 (264-333)||(12384991-12385060)
chr1 (252-333)||(48327156-48327236)
chr1 (213-333)||(40328270-40328387)
chr1 (283-333)||(26768887-26768937)
chr1 (283-333)||(44483759-44483809)
chr1 (214-268)||(49384627-49384680)
chr1 (284-333)||(39425970-39426019)
chr1 (206-270)||(1228496-1228560)
chr1 (204-280)||(12380831-12380907)
chr1 (204-280)||(12384898-12384974)
chr1 (205-305)||(27982072-27982171)
chr1 (213-289)||(45978041-45978117)
[»] chr6 (23 HSPs)
chr6 (205-333)||(2800566-2800694)
chr6 (205-333)||(7215807-7215935)
chr6 (204-333)||(4804440-4804569)
chr6 (213-333)||(7162076-7162196)
chr6 (213-333)||(21159332-21159452)
chr6 (248-333)||(24484871-24484956)
chr6 (213-333)||(17944154-17944274)
chr6 (255-333)||(27826530-27826608)
chr6 (252-333)||(12412629-12412710)
chr6 (213-333)||(17828532-17828651)
chr6 (215-326)||(23936252-23936365)
chr6 (213-329)||(227526-227643)
chr6 (248-333)||(2142291-2142376)
chr6 (252-333)||(13089751-13089832)
chr6 (248-330)||(13888520-13888603)
chr6 (250-333)||(32254031-32254114)
chr6 (252-333)||(1249150-1249229)
chr6 (272-333)||(29698155-29698216)
chr6 (206-248)||(9952993-9953035)
chr6 (287-325)||(2720373-2720411)
chr6 (248-317)||(7545645-7545715)
chr6 (256-294)||(9954332-9954370)
chr6 (214-270)||(29229149-29229204)
[»] chr2 (35 HSPs)
chr2 (207-333)||(30709102-30709228)
chr2 (206-333)||(4446852-4446979)
chr2 (204-328)||(19908777-19908899)
chr2 (205-333)||(31618724-31618850)
chr2 (213-333)||(35316817-35316937)
chr2 (206-281)||(30217517-30217592)
chr2 (256-333)||(28564884-28564961)
chr2 (213-333)||(13238673-13238793)
chr2 (249-333)||(21454494-21454577)
chr2 (230-333)||(36929708-36929810)
chr2 (230-328)||(15709765-15709862)
chr2 (247-333)||(34512022-34512108)
chr2 (248-333)||(374985-375070)
chr2 (248-333)||(8988847-8988932)
chr2 (209-325)||(30857638-30857753)
chr2 (252-333)||(23259489-23259570)
chr2 (248-333)||(23459844-23459929)
chr2 (248-333)||(35315286-35315371)
chr2 (248-333)||(38397073-38397158)
chr2 (206-333)||(2063345-2063472)
chr2 (205-275)||(30721564-30721632)
chr2 (213-333)||(36758825-36758944)
chr2 (230-333)||(15722226-15722328)
chr2 (206-333)||(35315494-35315620)
chr2 (213-279)||(22061433-22061498)
chr2 (248-333)||(29188645-29188731)
chr2 (255-328)||(4603114-4603187)
chr2 (248-317)||(19905889-19905958)
chr2 (250-333)||(30803312-30803395)
chr2 (247-325)||(38260294-38260370)
chr2 (299-333)||(3354812-3354846)
chr2 (303-333)||(30217482-30217512)
chr2 (207-256)||(6946335-6946384)
chr2 (260-328)||(26800321-26800389)
chr2 (262-326)||(41072961-41073025)
[»] chr8 (31 HSPs)
chr8 (207-333)||(42761705-42761831)
chr8 (248-333)||(26749546-26749631)
chr8 (252-333)||(30426671-30426752)
chr8 (204-333)||(21360268-21360400)
chr8 (230-333)||(24557162-24557264)
chr8 (213-333)||(28069711-28069831)
chr8 (213-333)||(36991348-36991468)
chr8 (230-328)||(18689488-18689585)
chr8 (213-333)||(6014186-6014307)
chr8 (211-328)||(42338008-42338124)
chr8 (250-325)||(36748492-36748566)
chr8 (252-333)||(40695249-40695330)
chr8 (257-329)||(10672519-10672591)
chr8 (206-333)||(45113262-45113390)
chr8 (248-333)||(1937152-1937238)
chr8 (287-333)||(6148997-6149043)
chr8 (204-333)||(10652571-10652701)
chr8 (248-326)||(17520381-17520459)
chr8 (249-327)||(34612562-34612640)
chr8 (272-333)||(28318924-28318985)
chr8 (252-333)||(41511254-41511335)
chr8 (258-333)||(6399916-6399991)
chr8 (203-333)||(37966397-37966525)
chr8 (248-333)||(3763520-3763605)
chr8 (296-333)||(30796270-30796307)
chr8 (272-333)||(44859189-44859250)
chr8 (202-268)||(20169125-20169190)
chr8 (256-322)||(24102019-24102085)
chr8 (292-333)||(24241567-24241608)
chr8 (255-323)||(21486925-21486993)
chr8 (301-333)||(24241673-24241705)
[»] chr5 (34 HSPs)
chr5 (213-321)||(29340999-29341106)
chr5 (213-333)||(35660572-35660692)
chr5 (214-333)||(4895699-4895818)
chr5 (213-333)||(11775785-11775905)
chr5 (213-333)||(32129580-32129700)
chr5 (252-333)||(14349795-14349876)
chr5 (213-333)||(18625384-18625504)
chr5 (213-333)||(37266723-37266843)
chr5 (248-333)||(10362012-10362097)
chr5 (248-333)||(36290594-36290679)
chr5 (252-333)||(40753164-40753245)
chr5 (213-325)||(43309108-43309220)
chr5 (230-333)||(34827184-34827287)
chr5 (215-333)||(39902407-39902525)
chr5 (249-333)||(2984389-2984473)
chr5 (213-333)||(13032110-13032230)
chr5 (248-328)||(31653032-31653112)
chr5 (248-333)||(3057152-3057237)
chr5 (248-333)||(18653353-18653438)
chr5 (248-331)||(41660100-41660183)
chr5 (267-333)||(4592792-4592858)
chr5 (256-333)||(14688566-14688643)
chr5 (249-325)||(31279914-31279990)
chr5 (206-333)||(3057408-3057534)
chr5 (258-325)||(43222126-43222193)
chr5 (211-277)||(9460597-9460662)
chr5 (248-318)||(27428879-27428949)
chr5 (287-333)||(28142812-28142858)
chr5 (248-333)||(31546478-31546563)
chr5 (249-333)||(17247398-17247482)
chr5 (247-326)||(38283776-38283855)
chr5 (283-333)||(3041341-3041391)
chr5 (206-240)||(21213953-21213987)
chr5 (260-333)||(8440981-8441054)
[»] chr4 (47 HSPs)
chr4 (213-333)||(19901881-19902001)
chr4 (208-333)||(36532618-36532741)
chr4 (213-333)||(5416429-5416548)
chr4 (213-333)||(23610634-23610754)
chr4 (206-333)||(56453777-56453903)
chr4 (204-333)||(56558271-56558400)
chr4 (210-333)||(42844148-42844270)
chr4 (247-333)||(5763159-5763245)
chr4 (209-325)||(1871277-1871392)
chr4 (213-333)||(3952133-3952253)
chr4 (213-333)||(34778413-34778533)
chr4 (248-327)||(56269074-56269153)
chr4 (248-333)||(5524439-5524524)
chr4 (214-333)||(5815267-5815383)
chr4 (248-328)||(48914516-48914596)
chr4 (205-326)||(15178628-15178738)
chr4 (208-333)||(47922324-47922450)
chr4 (248-333)||(23474103-23474188)
chr4 (256-333)||(30567893-30567970)
chr4 (213-329)||(18207003-18207119)
chr4 (213-333)||(39862509-39862629)
chr4 (252-322)||(24073619-24073689)
chr4 (255-333)||(33262557-33262635)
chr4 (248-326)||(36688186-36688264)
chr4 (248-333)||(37002249-37002334)
chr4 (248-333)||(42010109-42010194)
chr4 (213-332)||(12312438-12312558)
chr4 (213-333)||(33247093-33247213)
chr4 (285-333)||(46804623-46804671)
chr4 (248-327)||(1015852-1015931)
chr4 (248-323)||(50483554-50483629)
chr4 (283-333)||(12241441-12241491)
chr4 (287-333)||(31862257-31862303)
chr4 (255-333)||(38079725-38079803)
chr4 (211-321)||(13493276-13493387)
chr4 (211-276)||(33841766-33841830)
chr4 (250-333)||(37337091-37337174)
chr4 (283-333)||(48084558-48084608)
chr4 (207-333)||(4404282-4404409)
chr4 (282-333)||(3326509-3326560)
chr4 (256-326)||(34927484-34927555)
chr4 (299-333)||(5361435-5361469)
chr4 (299-333)||(47834573-47834607)
chr4 (247-284)||(5817976-5818013)
chr4 (219-304)||(36003216-36003300)
chr4 (283-327)||(17080811-17080855)
chr4 (295-327)||(52552772-52552804)
[»] chr7 (37 HSPs)
chr7 (213-328)||(4888464-4888579)
chr7 (248-333)||(47799898-47799983)
chr7 (208-327)||(40023215-40023333)
chr7 (252-333)||(12139318-12139400)
chr7 (252-333)||(25084730-25084811)
chr7 (205-333)||(33450498-33450627)
chr7 (206-295)||(47270580-47270668)
chr7 (213-333)||(9559017-9559137)
chr7 (206-333)||(39855770-39855896)
chr7 (217-333)||(7362560-7362676)
chr7 (213-333)||(7712331-7712450)
chr7 (213-333)||(16366510-16366630)
chr7 (213-333)||(21151144-21151264)
chr7 (214-325)||(989129-989239)
chr7 (248-327)||(32915954-32916033)
chr7 (204-333)||(47500236-47500366)
chr7 (248-329)||(8149605-8149686)
chr7 (248-333)||(30588527-30588612)
chr7 (252-333)||(45260429-45260510)
chr7 (214-333)||(29631040-29631156)
chr7 (244-300)||(29844316-29844372)
chr7 (206-325)||(7373867-7373985)
chr7 (250-333)||(24193585-24193668)
chr7 (218-333)||(38365647-38365761)
chr7 (213-329)||(44647958-44648076)
chr7 (204-333)||(18198248-18198377)
chr7 (248-333)||(19889032-19889117)
chr7 (213-333)||(47226039-47226157)
chr7 (286-333)||(11828945-11828992)
chr7 (250-325)||(46802331-46802406)
chr7 (248-333)||(34985943-34986029)
chr7 (213-281)||(5463867-5463934)
chr7 (247-317)||(19027680-19027751)
chr7 (247-317)||(20726885-20726956)
chr7 (211-325)||(30153144-30153257)
chr7 (202-268)||(44390835-44390900)
chr7 (235-292)||(18064588-18064643)
[»] scaffold0012 (1 HSPs)
scaffold0012 (213-333)||(208055-208175)
[»] scaffold0062 (2 HSPs)
scaffold0062 (230-328)||(58677-58774)
scaffold0062 (230-333)||(70783-70885)
[»] scaffold0250 (1 HSPs)
scaffold0250 (252-333)||(7139-7220)
[»] scaffold0121 (1 HSPs)
scaffold0121 (248-333)||(29567-29652)
[»] scaffold0171 (1 HSPs)
scaffold0171 (255-333)||(17311-17389)
[»] scaffold0035 (1 HSPs)
scaffold0035 (252-333)||(16399-16480)
[»] scaffold0126 (1 HSPs)
scaffold0126 (258-333)||(22450-22525)
[»] scaffold0008 (1 HSPs)
scaffold0008 (252-322)||(9203-9273)
[»] scaffold0009 (1 HSPs)
scaffold0009 (252-333)||(6437-6518)


Alignment Details
Target: chr3 (Bit Score: 168; Significance: 5e-90; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 12 - 218
Target Start/End: Original strand, 34897733 - 34897940
Alignment:
Q  12 ctctctccatttcttaaatgttgtagaaatggacaaatcagctgatnnnnnnnn-tagaagtggacatcttcaataccgttttgttcggtagaactataa 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||    
T  34897733 ctctctccatttcttaaatgttgtagaaatggacaaatcagctgataaaaaaaaatagaagtggacatcttcaataccgttttgttcggtagaactataa 34897832  T
Q  111 ttttgatacaaatagaaaatatcattgtaaaaactgttttgtttttggagaatttgttggaatccaagtcaacatgtaatagaggtgggtgagaggggtt 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||    
T  34897833 ttttgatacaaatagaaaatatcattgtaaaaactgttttgtttttggagaatttgtcggaatccaagtcaacatgtaattgaggtgggtgagaggggtt 34897932  T
Q  211 aggatcct 218  Q
    ||||||||    
T  34897933 aggatcct 34897940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 196 - 333
Target Start/End: Complemental strand, 1995573 - 1995436
Alignment:
Q  196 tgggtgagaggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccat 295  Q
    ||||||| | ||||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||||| | ||||||||||||| |||||||||     
T  1995573 tgggtgacatgggttaggatcctcttcattttatcaaataaatggaagtacacaatttgaagagagatagacatagaaaatagataatgagtcctaccaa 1995474  T
Q  296 taagtgggtcccactatcattaattattttttactttt 333  Q
    |||||| ||| ||| |||||||||||||||||||||||    
T  1995473 taagtgagtctcaccatcattaattattttttactttt 1995436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 213 - 333
Target Start/End: Complemental strand, 27033763 - 27033643
Alignment:
Q  213 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 312  Q
    |||| ||| ||||||||||||||||||||  |   ||| |||||||||||||||||||  ||||||||  |||||||||||| ||||||| |||||| ||    
T  27033763 gatcatctccatttgataaaataaatggagttttgcaagttggagagagatagacacaagaaatagatggtgggtcctaccactaagtggatcccaccat 27033664  T
Q  313 cattaattattttttactttt 333  Q
    |||||||||| ||||||||||    
T  27033663 cattaattatattttactttt 27033643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 207 - 281
Target Start/End: Complemental strand, 52859346 - 52859272
Alignment:
Q  207 ggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagata 281  Q
    ||||| |||||||| |||||||||||||||||| || |||||||||| |||||||||||||||||||||||||||    
T  52859346 ggttatgatcctctccatttgataaaataaatgaaaatacacaatttagagagagatagacacataaaatagata 52859272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 252 - 333
Target Start/End: Complemental strand, 2230056 - 2229975
Alignment:
Q  252 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    ||||||||||||||||||| ||||||||| ||||||||||||| ||||||| | |||| |||||||||||| ||||||||||    
T  2230056 ttggagagagatagacacaaaaaatagatgatgggtcctaccactaagtggtttccaccatcattaattatattttactttt 2229975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 213 - 329
Target Start/End: Original strand, 19830394 - 19830510
Alignment:
Q  213 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 312  Q
    |||||||| ||||||  ||||||||||||  |   ||| |||| |||| ||||||||| |||||||||  ||||||||||||||||||||||||||| ||    
T  19830394 gatcctctccatttggcaaaataaatggagttttgcaagttggggagaaatagacacaaaaaatagatggtgggtcctaccattaagtgggtcccaccat 19830493  T
Q  313 cattaattattttttac 329  Q
    |||||||||| ||||||    
T  19830494 cattaattatattttac 19830510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 213 - 333
Target Start/End: Original strand, 43719910 - 43720030
Alignment:
Q  213 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 312  Q
    |||||||| ||||| | ||||||||||||  |   ||| ||||||||||||||||||| |||||| ||  |||||||||||| |||||||||||||| ||    
T  43719910 gatcctctccatttaacaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaattgtgggtcctaccactaagtgggtcccaccat 43720009  T
Q  313 cattaattattttttactttt 333  Q
    |||||||||| ||||| ||||    
T  43720010 cattaattatattttattttt 43720030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 214 - 333
Target Start/End: Complemental strand, 44638052 - 44637934
Alignment:
Q  214 atcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatc 313  Q
    |||||| |||||||| |||||||||||| |||  |||||| |||||||||| |||||||||||||||| |||  ||||| ||||||| ||||| ||| ||    
T  44638052 atcctcatcatttgacaaaataaatgga-gtatgcaattttgagagagataaacacataaaatagatagtggaccctactattaagtaggtcctactgtc 44637954  T
Q  314 attaattattttttactttt 333  Q
    |||| |||||||||| ||||    
T  44637953 attagttattttttattttt 44637934  T

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Target: chr3; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 211 - 333
Target Start/End: Original strand, 10474400 - 10474521
Alignment:
Q  211 aggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccact 310  Q
    ||||||||||  |||||| | |||||||||| |||  |||||| |||||| |||||||||||||||||||||||| |||||| |||||||| || ||||     
T  10474400 aggatcctctctatttgacataataaatgga-gtatgcaattttgagagatatagacacataaaatagataatggatcctactattaagtgagttccacc 10474498  T
Q  311 atcattaattattttttactttt 333  Q
    | ||||||||| |||||| ||||    
T  10474499 aacattaattactttttagtttt 10474521  T

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Target: chr3; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 248 - 333
Target Start/End: Original strand, 31523666 - 31523751
Alignment:
Q  248 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    ||||||||||||||||||||||| ||||||  |  |||||||||  | |||||||||||||| |||||||||||||||||||||||    
T  31523666 caatttggagagagatagacacaaaaaataagtggtgggtcctattactaagtgggtcccaccatcattaattattttttactttt 31523751  T

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Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 252 - 333
Target Start/End: Complemental strand, 34373904 - 34373823
Alignment:
Q  252 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    ||||||||||||||||||| |||||||||  |||||||||||| ||| | |||||||| |||||||||||| ||||||||||    
T  34373904 ttggagagagatagacacaaaaaatagatggtgggtcctaccactaattaggtcccaccatcattaattatattttactttt 34373823  T

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Target: chr3; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 213 - 333
Target Start/End: Complemental strand, 29586447 - 29586328
Alignment:
Q  213 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 312  Q
    ||||||||||||||   | |||||||||| |||  || ||||||||||||||||||||||||||||||| |  ||| ||| |||||||||||| ||| ||    
T  29586447 gatcctcttcatttagcataataaatgga-gtatgcagtttggagagagatagacacataaaatagatagtaagtcttactattaagtgggtctcaccat 29586349  T
Q  313 cattaattattttttactttt 333  Q
    ||||||||| |||||| ||||    
T  29586348 cattaattactttttagtttt 29586328  T

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Target: chr3; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 206 - 333
Target Start/End: Complemental strand, 48084939 - 48084811
Alignment:
Q  206 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataa-aatagataatgggtcctaccattaagtgggt 304  Q
    |||||| |||||||| |||||| |||||||||| ||  |   |||||||| |||||||||||||| || |||||||  ||||||| |||| |||||||||    
T  48084939 gggttaagatcctctccatttgctaaaataaattgagttttgcaatttggggagagatagacacaaaagaatagatggtgggtccaaccactaagtgggt 48084840  T
Q  305 cccactatcattaattattttttactttt 333  Q
    ||||  |||||||||||||||||| ||||    
T  48084839 cccatcatcattaattattttttattttt 48084811  T

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Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 258 - 333
Target Start/End: Original strand, 34373593 - 34373668
Alignment:
Q  258 agagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    ||||||||||||  |||||||||  |||||||||||| |||||||||||||| |||||||||||| ||||||||||    
T  34373593 agagatagacactaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattatattttactttt 34373668  T

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Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 247 - 330
Target Start/End: Complemental strand, 54911732 - 54911649
Alignment:
Q  247 acaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttact 330  Q
    |||||||| ||||||||||| ||||||||||| || |||||||||||||||| || || |||| ||||||||||| ||||||||    
T  54911732 acaatttgaagagagatagagacataaaataggtagtgggtcctaccattaaatgagttccaccatcattaattaatttttact 54911649  T

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Target: chr3; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 248 - 333
Target Start/End: Complemental strand, 33632899 - 33632815
Alignment:
Q  248 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    |||||||||||||||||||||||||||||||||| ||| |||||| ||||| ||| | |||| ||||||||||| |||||| ||||    
T  33632899 caatttggagagagatagacacataaaatagatagtggatcctactattaaatggattccac-atcattaattactttttagtttt 33632815  T

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Target: chr3; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 248 - 333
Target Start/End: Complemental strand, 42613157 - 42613072
Alignment:
Q  248 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    ||||||| ||||||||||||| | ||||||  |  ||||||||| || |||||||||||||| |||||||||||||||||||||||    
T  42613157 caatttgaagagagatagacaaaaaaaataagtggtgggtcctatcactaagtgggtcccaccatcattaattattttttactttt 42613072  T

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Target: chr3; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 248 - 333
Target Start/End: Original strand, 49679268 - 49679353
Alignment:
Q  248 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    ||||||||||||||||||||||| ||||||  |   |||||||| || ||| |||||||||| |||||||||||||||||||||||    
T  49679268 caatttggagagagatagacacaaaaaataagtggcgggtcctatcactaaatgggtcccaccatcattaattattttttactttt 49679353  T

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Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 252 - 333
Target Start/End: Complemental strand, 46167466 - 46167385
Alignment:
Q  252 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    ||||||||||||||||||| |||||| ||  |||||||||||| ||||||| ||| || || ||||||||| ||||||||||    
T  46167466 ttggagagagatagacacaaaaaatatatggtgggtcctaccactaagtggatcctaccattattaattatattttactttt 46167385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 213 - 330
Target Start/End: Original strand, 51982549 - 51982665
Alignment:
Q  213 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 312  Q
    |||||||| |||||   |||||||||||||| |  ||||||||||||||||||| ||||||||||| || ||||| ||| ||||||||| || | |  ||    
T  51982549 gatcctctccatttataaaaataaatggaag-atgcaatttggagagagatagatacataaaatagttagtgggttctatcattaagtgagttctatcat 51982647  T
Q  313 cattaattattttttact 330  Q
    ||||||||| ||||||||    
T  51982648 cattaattactttttact 51982665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 213 - 309
Target Start/End: Complemental strand, 24754769 - 24754673
Alignment:
Q  213 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccac 309  Q
    |||||||| ||||||  ||||||||||||  |  |||| ||||||||||||||||||| |||||||||  |  ||||||||| ||||||||||||||    
T  24754769 gatcctctccatttggcaaaataaatggagttttacaagttggagagagatagacacacaaaatagatggtatgtcctaccactaagtgggtcccac 24754673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 213 - 309
Target Start/End: Complemental strand, 24763766 - 24763670
Alignment:
Q  213 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccac 309  Q
    |||||||| ||||||  ||||||||||||  |  |||| ||||||||||||||||||| |||||||||  |  ||||||||| ||||||||||||||    
T  24763766 gatcctctccatttggcaaaataaatggagttttacaagttggagagagatagacacacaaaatagatggtatgtcctaccactaagtgggtcccac 24763670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 287 - 333
Target Start/End: Original strand, 34897937 - 34897983
Alignment:
Q  287 tcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||    
T  34897937 tcctaccattaaatgggttccactatcattaattattttttactttt 34897983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 248 - 333
Target Start/End: Original strand, 550814 - 550899
Alignment:
Q  248 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    ||||||||||| ||||| | ||| |||||||||  ||| ||||| ||||||||||||||||| || |||| |||| ||||||||||    
T  550814 caatttggagaaagatatatacaaaaaatagatggtggatcctatcattaagtgggtcccaccattattatttatattttactttt 550899  T

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Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 333
Target Start/End: Original strand, 25285843 - 25285920
Alignment:
Q  256 agagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    |||||||||||||||||||||||||| ||| ||||| |||||| || | ||||| ||||| |||| ||||| ||||||    
T  25285843 agagagatagacacataaaatagatagtggatcctatcattaaatgagacccaccatcatcaattttttttgactttt 25285920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 325
Target Start/End: Original strand, 47750274 - 47750380
Alignment:
Q  218 tcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 317  Q
    ||||||||||| |||||||||| | ||| |||||||| ||||| ||| ||||| ||||||||||| | ||| || ||||||||| |||| || || ||||    
T  47750274 tcttcatttgacaaaataaatg-aggtatacaatttgaagagacataaacacaaaaaatagataaagagtcttatcattaagtgagtcctaccattatta 47750372  T
Q  318 attatttt 325  Q
    | ||||||    
T  47750373 aatatttt 47750380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 333
Target Start/End: Original strand, 40810353 - 40810439
Alignment:
Q  248 caatttggagagagatagacacataa-aatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    ||||||||||||||||| ||| | || |||||||  ||||||  |||| |||||||||||||  |||||||||||||||||| ||||    
T  40810353 caatttggagagagataaacaaaaaagaatagatggtgggtctaaccactaagtgggtcccatcatcattaattattttttattttt 40810439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 280
Target Start/End: Original strand, 30235416 - 30235484
Alignment:
Q  211 aggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagat 280  Q
    |||||| |||||||||| |||||||||||| ||||  ||||||| ||||||||||||| | |||||||||    
T  30235416 aggatcatcttcatttgttaaaataaatgg-agtatgcaatttgaagagagatagacataaaaaatagat 30235484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 213 - 318
Target Start/End: Complemental strand, 40851886 - 40851781
Alignment:
Q  213 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 312  Q
    ||||||||  |||||| ||||||||||||  |   ||| ||||||| ||||||||||| |||||||||  ||||| | |||| ||||||||||| || ||    
T  40851886 gatcctctcaatttgacaaaataaatggagttttgcaagttggagaaagatagacacaaaaaatagatggtgggttcaaccactaagtgggtcctaccat 40851787  T
Q  313 cattaa 318  Q
    ||||||    
T  40851786 cattaa 40851781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 333
Target Start/End: Complemental strand, 27959133 - 27959099
Alignment:
Q  299 gtgggtcccactatcattaattattttttactttt 333  Q
    ||||||||||| |||||||||||||||||||||||    
T  27959133 gtgggtcccaccatcattaattattttttactttt 27959099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 333
Target Start/End: Complemental strand, 3009264 - 3009231
Alignment:
Q  300 tgggtcccactatcattaattattttttactttt 333  Q
    |||||||||| |||||||||||||||||||||||    
T  3009264 tgggtcccaccatcattaattattttttactttt 3009231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 333
Target Start/End: Complemental strand, 12403039 - 12402958
Alignment:
Q  252 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    ||||||||||||||| | | ||| |||||  ||| | |||||| |||||| ||||||| || ||||||||| ||||||||||    
T  12403039 ttggagagagatagatataaaaattagatggtggattctaccactaagtgagtcccaccattattaattatattttactttt 12402958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 329
Target Start/End: Original strand, 47914166 - 47914246
Alignment:
Q  249 aatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttac 329  Q
    ||||| ||||| |||| | ||||||||||| || | | |||||  |||||||| ||||||| ||||||||||| |||||||    
T  47914166 aatttagagagtgatatagacataaaataggtagtagatcctattattaagtgagtcccaccatcattaattactttttac 47914246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 105; Significance: 2e-52; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 205 - 333
Target Start/End: Complemental strand, 39426330 - 39426202
Alignment:
Q  205 ggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggt 304  Q
    |||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  39426330 ggggttagtatcatctccatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagatagtgggtcctaccactaattgggt 39426231  T
Q  305 cccactatcattaattattttttactttt 333  Q
    |||||||||||||||||||||||||||||    
T  39426230 cccactatcattaattattttttactttt 39426202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 204 - 325
Target Start/End: Original strand, 32887735 - 32887855
Alignment:
Q  204 aggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtggg 303  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||| ||| |||| |||||||||||||||||| ||| ||| |||||||||||| ||||    
T  32887735 agggattaggatcctcttcatttgataaaataaatgga-gtacacagtttagagaaagatagacacataaaataaatagtggatcctaccattaaatggg 32887833  T
Q  304 tcccactatcattaattatttt 325  Q
    |||||| |||||||||||||||    
T  32887834 tcccaccatcattaattatttt 32887855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 209 - 333
Target Start/End: Original strand, 26860010 - 26860133
Alignment:
Q  209 ttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtccca 308  Q
    |||||||| |||  ||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||| | ||||||| || ||||||| |||||    
T  26860010 ttaggatcatctctatttgataaaataaatgga-gtacataatttgaagagagatagacacataaaatagatagtaggtcctatcactaagtggatccca 26860108  T
Q  309 ctatcattaattattttttactttt 333  Q
    | |||||||||||||||||||||||    
T  26860109 caatcattaattattttttactttt 26860133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 213 - 333
Target Start/End: Complemental strand, 26372362 - 26372244
Alignment:
Q  213 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 312  Q
    ||||||||  ||||||||||||||||||||||| | |||||  |||||||||||||| ||||||||| ||| | ||||||||||||||||||||||| |     
T  26372362 gatcctctcaatttgataaaataaatggaagtagataattt--agagagatagacacgtaaaatagacaatagatcctaccattaagtgggtcccaccac 26372265  T
Q  313 cattaattattttttactttt 333  Q
    |||||||||||||||||||||    
T  26372264 cattaattattttttactttt 26372244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 207 - 293
Target Start/End: Original strand, 35534741 - 35534825
Alignment:
Q  207 ggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctacc 293  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||| |||||||    
T  35534741 ggttagtatcctctccatttgataaaataaatggaagtacacaattt--agagagatagacacataaaatagatagtggatcctacc 35534825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 252 - 333
Target Start/End: Complemental strand, 12151840 - 12151759
Alignment:
Q  252 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    ||||||||||| ||||||| |||||||||  |||||||||||| |||||||||||||| |||||||||||| ||||||||||    
T  12151840 ttggagagagaaagacacaaaaaatagattgtgggtcctaccactaagtgggtcccaccatcattaattatattttactttt 12151759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 213 - 333
Target Start/End: Original strand, 50294026 - 50294146
Alignment:
Q  213 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 312  Q
    |||||||||||||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  |||||||||||| ||||||| ||| || ||    
T  50294026 gatcctcttcatttggcaaaataaatggagatttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtggatcctaccat 50294125  T
Q  313 cattaattattttttactttt 333  Q
    |||||||||| ||||| ||||    
T  50294126 cattaattatattttattttt 50294146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 248 - 325
Target Start/End: Original strand, 5047379 - 5047456
Alignment:
Q  248 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattatttt 325  Q
    |||||||||||||||| ||  ||||||||||||||||| |||||||| || ||||||||||| |||||||||||||||    
T  5047379 caatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggtcccaccatcattaattatttt 5047456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 248 - 333
Target Start/End: Original strand, 30077642 - 30077727
Alignment:
Q  248 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    ||||||||||||||||||||||| ||||||  |  ||||| ||| || |||||| |||||||||||||||||||||||||||||||    
T  30077642 caatttggagagagatagacacaaaaaataagtggtgggttctatcactaagtgagtcccactatcattaattattttttactttt 30077727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 213 - 333
Target Start/End: Complemental strand, 32618911 - 32618793
Alignment:
Q  213 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 312  Q
    |||||||||||||||  | |||||||||| |||  |||||||||||||||| |||| ||||| |||||| ||| |||||| ||||||| |||||||| ||    
T  32618911 gatcctcttcatttggcataataaatgga-gtatccaatttggagagagatggacatataaa-tagatagtggatcctactattaagtaggtcccaccat 32618814  T
Q  313 cattaattattttttactttt 333  Q
    ||||||||| |||||| ||||    
T  32618813 cattaattactttttagtttt 32618793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 213 - 333
Target Start/End: Complemental strand, 50484498 - 50484378
Alignment:
Q  213 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 312  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  ||||| | |||| ||||||||||||||  |    
T  50484498 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtacaaccactaagtgggtcccaccgt 50484399  T
Q  313 cattaattattttttactttt 333  Q
    |||||||||| ||||||||||    
T  50484398 cattaattatattttactttt 50484378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 206 - 326
Target Start/End: Original strand, 18976260 - 18976381
Alignment:
Q  206 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataa-aatagataatgggtcctaccattaagtgggt 304  Q
    |||||| |||||||| |||||| |||||||||| ||  |   ||||||||||||||||||||||| || |||||||  ||| ||| |||||||||| |||    
T  18976260 gggttaagatcctctccatttgctaaaataaattgagttttgcaatttggagagagatagacacaaaagaatagatggtggatccaaccattaagtaggt 18976359  T
Q  305 cccactatcattaattattttt 326  Q
    ||||  ||||||||||||||||    
T  18976360 cccatcatcattaattattttt 18976381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 248 - 333
Target Start/End: Original strand, 52280037 - 52280122
Alignment:
Q  248 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    ||||||||||||||||||||| | ||||||  |  ||||||||| || ||||||| |||||| |||||||||||||||||||||||    
T  52280037 caatttggagagagatagacataaaaaataagtggtgggtcctatcactaagtggatcccaccatcattaattattttttactttt 52280122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 247 - 333
Target Start/End: Complemental strand, 24977318 - 24977232
Alignment:
Q  247 acaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    ||||||| |||||||||||||||| |||||||||  ||| |||||||| ||||||||| |||| ||||||| |||| ||||| ||||    
T  24977318 acaatttagagagagatagacacaaaaaatagatggtggatcctaccactaagtgggttccacaatcattagttatattttattttt 24977232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 252 - 309
Target Start/End: Original strand, 7840681 - 7840738
Alignment:
Q  252 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccac 309  Q
    |||||||||||||||||||  |||||||| |||||||||||||||||| |||||||||    
T  7840681 ttggagagagatagacacaagaaatagatgatgggtcctaccattaagcgggtcccac 7840738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 325
Target Start/End: Original strand, 5854799 - 5854921
Alignment:
Q  202 agaggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtg 301  Q
    |||||||||| |||||||| ||||||| | |||||||||| ||| |||||||| | ||||||||||| | ||| | || | ||| ||||||||| || ||    
T  5854799 agaggggttatgatcctctacatttgaaagaataaatgga-gtatacaatttgaaaagagatagacataaaaatttgagagtggatcctaccataaaatg 5854897  T
Q  302 ggtcccactatcattaattatttt 325  Q
    | |||||  |||||||||||||||    
T  5854898 gatcccatcatcattaattatttt 5854921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 259 - 325
Target Start/End: Original strand, 24413291 - 24413357
Alignment:
Q  259 gagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattatttt 325  Q
    |||||||||||| ||||| |||  ||||||||| |||||| |||||||||| |||||||||||||||    
T  24413291 gagatagacacaaaaaatggatggtgggtcctatcattaaatgggtcccaccatcattaattatttt 24413357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 283 - 333
Target Start/End: Original strand, 46608410 - 46608460
Alignment:
Q  283 tgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    |||||||||||| |||||||| ||||| |||||||||||||||||||||||    
T  46608410 tgggtcctaccactaagtgggacccaccatcattaattattttttactttt 46608460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 333
Target Start/End: Original strand, 12380924 - 12380993
Alignment:
Q  264 agacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    ||||||| |||||||||  ||||| |||||| |||||| ||||||| |||||||||||| ||||||||||    
T  12380924 agacacaaaaaatagatggtgggttctaccactaagtgagtcccaccatcattaattatattttactttt 12380993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 333
Target Start/End: Original strand, 12384991 - 12385060
Alignment:
Q  264 agacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    ||||||| |||||||||  ||||| |||||| |||||| ||||||| |||||||||||| ||||||||||    
T  12384991 agacacaaaaaatagatggtgggttctaccactaagtgagtcccaccatcattaattatattttactttt 12385060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 252 - 333
Target Start/End: Original strand, 48327156 - 48327236
Alignment:
Q  252 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    ||||||||||||||||| | |||||||||  || ||||||||| ||||||||| |||| |||||||||||| ||||| ||||    
T  48327156 ttggagagagatagacaaaaaaaatagatggtgagtcctaccactaagtgggt-ccaccatcattaattatattttattttt 48327236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 213 - 333
Target Start/End: Complemental strand, 40328387 - 40328270
Alignment:
Q  213 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 312  Q
    |||||||| ||||||  ||||||||||||  |   ||| |||  |||||||||||||| |||||||||  ||||||| |||| ||||||||| |||| ||    
T  40328387 gatcctctccatttggcaaaataaatggagttttgcaaattg--gagagatagacaca-aaaatagatggtgggtcccaccactaagtgggttccaccat 40328291  T
Q  313 cattaattattttttactttt 333  Q
    ||||| |||| ||||||||||    
T  40328290 cattagttatattttactttt 40328270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 283 - 333
Target Start/End: Complemental strand, 26768937 - 26768887
Alignment:
Q  283 tgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    ||||| ||| ||||||||| ||| ||| |||||||||||||||||||||||    
T  26768937 tgggttctatcattaagtgagtctcaccatcattaattattttttactttt 26768887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 283 - 333
Target Start/End: Complemental strand, 44483809 - 44483759
Alignment:
Q  283 tgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    |||||||||||||||| ||| | |||| |||||||||||||||||| ||||    
T  44483809 tgggtcctaccattaaatggattccaccatcattaattattttttattttt 44483759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 268
Target Start/End: Original strand, 49384627 - 49384680
Alignment:
Q  214 atcctcttcatttgataaaataaatggaagtacacaatttggagagagatagaca 268  Q
    ||||||| |||||| |||||||||||||| || ||||||| ||||||||||||||    
T  49384627 atcctctccatttgttaaaataaatggaa-tatacaatttagagagagatagaca 49384680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 333
Target Start/End: Complemental strand, 39426019 - 39425970
Alignment:
Q  284 gggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    ||||||||||||| |||||||| | |||||||||||| |||||| |||||    
T  39426019 gggtcctaccattgagtgggtctcgctatcattaattttttttttctttt 39425970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 270
Target Start/End: Original strand, 1228496 - 1228560
Alignment:
Q  206 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacaca 270  Q
    |||||| ||||||||||||||  |||||||||||||  |   ||||||||||||||| |||||||    
T  1228496 gggttaagatcctcttcatttactaaaataaatggagttttgcaatttggagagagacagacaca 1228560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 280
Target Start/End: Original strand, 12380831 - 12380907
Alignment:
Q  204 aggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagat 280  Q
    |||||| | |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||    
T  12380831 aggggtgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagat 12380907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 280
Target Start/End: Original strand, 12384898 - 12384974
Alignment:
Q  204 aggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagat 280  Q
    |||||| | |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||    
T  12384898 aggggtgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagat 12384974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 305
Target Start/End: Complemental strand, 27982171 - 27982072
Alignment:
Q  205 ggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggt 304  Q
    ||||||| |||||||| |||||   |||||||||||||| |  ||||||||||||| ||||||| | |||||| ||  ||||||| | |||||| |||||    
T  27982171 ggggttaagatcctctccatttataaaaataaatggaag-atgcaatttggagagatatagacataaaaaatatatgttgggtcccatcattaaatgggt 27982073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 289
Target Start/End: Complemental strand, 45978117 - 45978041
Alignment:
Q  213 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcc 289  Q
    ||||||||  |||||||||||||||||||  |   ||| ||||||||||||||| ||| |||||||||  |||||||    
T  45978117 gatcctctctatttgataaaataaatggagttttgcaagttggagagagatagatacaaaaaatagatggtgggtcc 45978041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 97; Significance: 1e-47; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 205 - 333
Target Start/End: Original strand, 2800566 - 2800694
Alignment:
Q  205 ggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggt 304  Q
    |||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||| || |||||||||||||||    
T  2800566 ggggttaggatcctctccatttgataaaattaatggaaatacacaatttggagagagatagacacataaaatagatagtggatcataccattaagtgggt 2800665  T
Q  305 cccactatcattaattattttttactttt 333  Q
    ||||| |||||| ||||||||||||||||    
T  2800666 cccaccatcattgattattttttactttt 2800694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 205 - 333
Target Start/End: Original strand, 7215807 - 7215935
Alignment:
Q  205 ggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggt 304  Q
    |||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  7215807 ggggttagtatcctctccatttgataaaataaatggaagtgcacaatttggagagagatagacacataaaatagatagtgggtcctaccactaattgggt 7215906  T
Q  305 cccactatcattaattattttttactttt 333  Q
    |||||||||||||||||  ||||||||||    
T  7215907 cccactatcattaattacgttttactttt 7215935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 204 - 333
Target Start/End: Complemental strand, 4804569 - 4804440
Alignment:
Q  204 aggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtggg 303  Q
    |||||| | |||||||| ||||||  ||||||||||||  |  |||| ||||||||||||||||||| |||||||||  |||||||||||| ||||||||    
T  4804569 aggggtgaagatcctctccatttggcaaaataaatggagttttacaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtggg 4804470  T
Q  304 tcccactatcattaattattttttactttt 333  Q
    |||||| |||||||||||| ||||||||||    
T  4804469 tcccaccatcattaattatattttactttt 4804440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 213 - 333
Target Start/End: Complemental strand, 7162196 - 7162076
Alignment:
Q  213 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 312  Q
    |||| ||| ||||||||||||||||||||  |   ||| |||||||||||||||||||  ||||||||  |||||||||| | |||||||||||||| ||    
T  7162196 gatcatctccatttgataaaataaatggagttttgcaagttggagagagatagacacaagaaatagatggtgggtcctactactaagtgggtcccaccat 7162097  T
Q  313 cattaattattttttactttt 333  Q
    |||||||||| ||||||||||    
T  7162096 cattaattatattttactttt 7162076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 213 - 333
Target Start/End: Original strand, 21159332 - 21159452
Alignment:
Q  213 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 312  Q
    |||||||| |||||| ||||||||||| |  |   ||| ||||||||| ||||||||| |||||||||  |||||||||||| |||||||||||||| ||    
T  21159332 gatcctctccatttgttaaaataaatgaagttttgcaagttggagagaaatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccat 21159431  T
Q  313 cattaattattttttactttt 333  Q
    |||||||||| ||||||||||    
T  21159432 cattaattatattttactttt 21159452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 248 - 333
Target Start/End: Complemental strand, 24484956 - 24484871
Alignment:
Q  248 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    ||||||||||||||||||||||| ||||||  |  ||||||||| || |||||||||||||| |||||||||||||||||||||||    
T  24484956 caatttggagagagatagacacaaaaaataagtggtgggtcctatcactaagtgggtcccaccatcattaattattttttactttt 24484871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 213 - 333
Target Start/End: Complemental strand, 17944274 - 17944154
Alignment:
Q  213 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 312  Q
    |||||||||||||||  ||||||||||||  |    || ||||||||||||||||||| |||||||||  | |||||||||| ||| |||||||||| ||    
T  17944274 gatcctcttcatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggtcccaccat 17944175  T
Q  313 cattaattattttttactttt 333  Q
    |||||||||| ||||||||||    
T  17944174 cattaattatattttactttt 17944154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 255 - 333
Target Start/End: Complemental strand, 27826608 - 27826530
Alignment:
Q  255 gagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    |||||||||||||||| |||||||||  |||||||||||| |||||||||||||| |||||||||||| ||||| ||||    
T  27826608 gagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattatattttattttt 27826530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 252 - 333
Target Start/End: Complemental strand, 12412710 - 12412629
Alignment:
Q  252 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    |||||||||||||||||||  ||||||||  |||||||||||| ||||||||| |||| |||||||||||| ||||||||||    
T  12412710 ttggagagagatagacacaagaaatagatggtgggtcctaccactaagtgggttccaccatcattaattatattttactttt 12412629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 213 - 333
Target Start/End: Original strand, 17828532 - 17828651
Alignment:
Q  213 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 312  Q
    |||||||| |||||| || ||||| |||| |||  |||||||||||||||||||||||||||||||||| ||| | |||| ||||||||| |||||  ||    
T  17828532 gatcctctacatttggtataataattgga-gtatgcaatttggagagagatagacacataaaatagatagtggattctactattaagtggatcccatcat 17828630  T
Q  313 cattaattattttttactttt 333  Q
    || |||||| |||||| ||||    
T  17828631 caataattaatttttagtttt 17828651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 215 - 326
Target Start/End: Complemental strand, 23936365 - 23936252
Alignment:
Q  215 tcctcttcatttgataaaataaatggaagtacacaatttggagagaga--tagacacataaaatagataatgggtcctaccattaagtgggtcccactat 312  Q
    |||||| ||||||||||| | |||| |||||||||||| |||||||||  ||||||||||| || ||||  || | ||||||||||||||||||||| ||    
T  23936365 tcctctccatttgataaattgaatgaaagtacacaattcggagagagagatagacacataagatggatagcggattctaccattaagtgggtcccaccat 23936266  T
Q  313 cattaattattttt 326  Q
    | || |||||||||    
T  23936265 ccttgattattttt 23936252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 213 - 329
Target Start/End: Original strand, 227526 - 227643
Alignment:
Q  213 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataa-aatagataatgggtcctaccattaagtgggtcccacta 311  Q
    |||||||| |||||| |||||||||||||  |   || |||||||||||||||||||| || |||||||  |||||||||||| ||||||| |||||  |    
T  227526 gatcctctccatttgctaaaataaatggagttttgcattttggagagagatagacacaaaagaatagatggtgggtcctaccactaagtggatcccatca 227625  T
Q  312 tcattaattattttttac 329  Q
    ||||| ||||||||||||    
T  227626 tcattgattattttttac 227643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 248 - 333
Target Start/End: Original strand, 2142291 - 2142376
Alignment:
Q  248 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    ||||||||||||||||||||||| ||||||  |  ||||||| | ||||| |||||| |||| |||||||||||||||||||||||    
T  2142291 caatttggagagagatagacacaaaaaataagtggtgggtcccatcattaggtgggttccaccatcattaattattttttactttt 2142376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 252 - 333
Target Start/End: Original strand, 13089751 - 13089832
Alignment:
Q  252 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    ||||||||||||||||||| || ||||||  |||||||||||| |||||||| ||||| |||||||||||| ||||| ||||    
T  13089751 ttggagagagatagacacaaaatatagatggtgggtcctaccactaagtgggccccaccatcattaattatattttattttt 13089832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 248 - 330
Target Start/End: Original strand, 13888520 - 13888603
Alignment:
Q  248 caatttggagagagatagacacataa-aatagataatgggtcctaccattaagtgggtcccactatcattaattattttttact 330  Q
    ||||||||||||||||| ||||| || |||||||  ||| |||||||||||| |||||||||  ||||||||||||||||||||    
T  13888520 caatttggagagagatatacacaaaataatagatggtggttcctaccattaactgggtcccatcatcattaattattttttact 13888603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 250 - 333
Target Start/End: Original strand, 32254031 - 32254114
Alignment:
Q  250 atttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    |||||||| |||||||||| | |||| || |  ||||||||| ||||||||| |||||||||||||||||||||||||| ||||    
T  32254031 atttggagggagatagacaaaaaaaaaaggtggtgggtcctatcattaagtgagtcccactatcattaattattttttattttt 32254114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 252 - 333
Target Start/End: Original strand, 1249150 - 1249229
Alignment:
Q  252 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    ||||||||||| ||||| |  ||||||||  |||||||||||| |||||||||||||| |||||||||||| ||||||||||    
T  1249150 ttggagagagacagacaaa--aaatagatggtgggtcctaccactaagtgggtcccaccatcattaattatattttactttt 1249229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 272 - 333
Target Start/End: Complemental strand, 29698216 - 29698155
Alignment:
Q  272 aaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    |||||||||  ||| ||||||||||||||||||||||| |||||||||||| ||||||||||    
T  29698216 aaaatagatggtggatcctaccattaagtgggtcccaccatcattaattatattttactttt 29698155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 248
Target Start/End: Original strand, 9952993 - 9953035
Alignment:
Q  206 gggttaggatcctcttcatttgataaaataaatggaagtacac 248  Q
    |||||| |||||||| |||||||||||||||||||||||||||    
T  9952993 gggttaagatcctctccatttgataaaataaatggaagtacac 9953035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 325
Target Start/End: Complemental strand, 2720411 - 2720373
Alignment:
Q  287 tcctaccattaagtgggtcccactatcattaattatttt 325  Q
    |||||||| |||||||||||||| |||||||||||||||    
T  2720411 tcctaccactaagtgggtcccaccatcattaattatttt 2720373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 317
Target Start/End: Complemental strand, 7545715 - 7545645
Alignment:
Q  248 caatttggagagagatagacac-ataaaatagataatgggtcctaccattaagtgggtcccactatcatta 317  Q
    |||||||||||||||||||||| | ||||||  |  ||||||||| || ||||||| ||||||||||||||    
T  7545715 caatttggagagagatagacaccaaaaaataagtggtgggtcctatcactaagtggatcccactatcatta 7545645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 294
Target Start/End: Original strand, 9954332 - 9954370
Alignment:
Q  256 agagagatagacacataaaatagataatgggtcctacca 294  Q
    |||||||||||||||||||||||||| ||||||| ||||    
T  9954332 agagagatagacacataaaatagatagtgggtcccacca 9954370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 270
Target Start/End: Complemental strand, 29229204 - 29229149
Alignment:
Q  214 atcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacaca 270  Q
    ||||||| |||||| || |||||||||| |||  |||||||||||||||||||||||    
T  29229204 atcctctccatttggtataataaatgga-gtatgcaatttggagagagatagacaca 29229149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 87; Significance: 1e-41; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 207 - 333
Target Start/End: Complemental strand, 30709228 - 30709102
Alignment:
Q  207 ggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcc 306  Q
    |||||||||||||| ||| | ||||||| |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||    
T  30709228 ggttaggatcctctccatcttataaaatcaatgaaagtacacaatttggagagagatagacacataaaatagatattgggtcctaccactaagtggatcc 30709129  T
Q  307 cactatcattaattattttttactttt 333  Q
    ||| |||||||||| ||||||||||||    
T  30709128 caccatcattaattgttttttactttt 30709102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 206 - 333
Target Start/End: Original strand, 4446852 - 4446979
Alignment:
Q  206 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtc 305  Q
    ||||||| ||||||| |||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||| ||| |||||||| ||| |||||     
T  4446852 gggttagtatcctctccatttgataaaataaatggaagtgtacaatttgaagagagatagacacataaaatagatagtggatcctaccactaattgggtt 4446951  T
Q  306 ccactatcattaattattttttactttt 333  Q
     |||||||||||||||||||||||||||    
T  4446952 tcactatcattaattattttttactttt 4446979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 204 - 328
Target Start/End: Complemental strand, 19908899 - 19908777
Alignment:
Q  204 aggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtggg 303  Q
    |||||| | |||||||||||||||||| |||||||||| |||  |||||||||| ||||||||||||||||||||||| || |||||||  |||||||||    
T  19908899 aggggtaaagatcctcttcatttgatataataaatgga-gtatgcaatttggag-gagatagacacataaaatagatagtgagtcctacttttaagtggg 19908802  T
Q  304 tcccactatcattaattatttttta 328  Q
    |||||| ||||||||||||||||||    
T  19908801 tcccaccatcattaattatttttta 19908777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 205 - 333
Target Start/End: Original strand, 31618724 - 31618850
Alignment:
Q  205 ggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggt 304  Q
    |||||||||||||||| |||||||||||  ||||||| ||| |||||||||||| ||||||| | |||||||||||| || ||| || ||||||||| ||    
T  31618724 ggggttaggatcctctccatttgataaag-aaatgga-gtatacaatttggagaaagatagatatataaaatagatagtgagtcatatcattaagtgagt 31618821  T
Q  305 cccactatcattaattattttttactttt 333  Q
    ||||| |||||||||||||||||||||||    
T  31618822 cccacaatcattaattattttttactttt 31618850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 213 - 333
Target Start/End: Complemental strand, 35316937 - 35316817
Alignment:
Q  213 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 312  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  ||| |||||||| |||||||||||||| ||    
T  35316937 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggatcctaccactaagtgggtcccaccat 35316838  T
Q  313 cattaattattttttactttt 333  Q
    |||||||||| ||||||||||    
T  35316837 cattaattatattttactttt 35316817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 206 - 281
Target Start/End: Complemental strand, 30217592 - 30217517
Alignment:
Q  206 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagata 281  Q
    |||||||||||||||  ||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||    
T  30217592 gggttaggatcctctctatttgataaaataaatggaagcacacaatttagagtgagatagacacataaaatagata 30217517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 256 - 333
Target Start/End: Complemental strand, 28564961 - 28564884
Alignment:
Q  256 agagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    ||||||||||||||| |||||||||  |||||||||||| |||||||||||||| |||||||||||| ||||||||||    
T  28564961 agagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattatattttactttt 28564884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 213 - 333
Target Start/End: Complemental strand, 13238793 - 13238673
Alignment:
Q  213 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 312  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  ||||||||||||  ||||||||||||| ||    
T  13238793 gatcctctccatttggcaaaataaatggagatttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccaccaagtgggtcccaccat 13238694  T
Q  313 cattaattattttttactttt 333  Q
    |||||||||| ||||| ||||    
T  13238693 cattaattatattttattttt 13238673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 249 - 333
Target Start/End: Original strand, 21454494 - 21454577
Alignment:
Q  249 aatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    ||||| |||||||||||||||| |||||||||  |||||| ||||||||||||||| |||| |||||||||||||||||||||||    
T  21454494 aatttagagagagatagacaca-aaaatagattgtgggtcataccattaagtgggttccaccatcattaattattttttactttt 21454577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 230 - 333
Target Start/End: Complemental strand, 36929810 - 36929708
Alignment:
Q  230 aaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttac 329  Q
    |||||||||||| |||  ||||||||||||||||||||||||||||||| || || ||||||||||||| ||| | || | ||||||||||| |||||||    
T  36929810 aaaataaatgga-gtatgcaatttggagagagatagacacataaaataggtagtgtgtcctaccattaaatggattccgccatcattaattactttttac 36929712  T
Q  330 tttt 333  Q
    ||||    
T  36929711 tttt 36929708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 230 - 328
Target Start/End: Complemental strand, 15709862 - 15709765
Alignment:
Q  230 aaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattatttttta 328  Q
    ||||||||||||| ||  ||||||||||||||||| ||| |||||||||||| ||| |||||||||||||||||| |||  ||||||||||| ||||||    
T  15709862 aaaataaatggaa-tatgcaatttggagagagataaacatataaaatagatagtggatcctaccattaagtgggttccatcatcattaattacttttta 15709765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 247 - 333
Target Start/End: Original strand, 34512022 - 34512108
Alignment:
Q  247 acaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    |||||||||||| |||||||||||||||||||||| |||||  ||| ||||||| |||| ||| |||||||||| ||||||||||||    
T  34512022 acaatttggagaaagatagacacataaaatagatagtgggttatactattaagtaggtctcacaatcattaattgttttttactttt 34512108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 248 - 333
Target Start/End: Complemental strand, 375070 - 374985
Alignment:
Q  248 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    ||||||||||||||||||||||| ||||||  |  |||||||||  | |||||||||||||| |||||||||||||||||||||||    
T  375070 caatttggagagagatagacacaaaaaataagtggtgggtcctattactaagtgggtcccaccatcattaattattttttactttt 374985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 248 - 333
Target Start/End: Complemental strand, 8988932 - 8988847
Alignment:
Q  248 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    ||||||||||||||||||||||| ||||||  | || ||||||| || |||||||||||||| |||||||||||||||||| ||||    
T  8988932 caatttggagagagatagacacaaaaaataagtgataggtcctatcactaagtgggtcccaccatcattaattattttttattttt 8988847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 209 - 325
Target Start/End: Original strand, 30857638 - 30857753
Alignment:
Q  209 ttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtccca 308  Q
    |||||||||||| ||||| | |||||||||||| |||   |||||| |||||| |||||||| |||||||||||||| |||||| ||||| ||| || ||    
T  30857638 ttaggatcctctccatttcacaaaataaatgga-gtatgtaatttgaagagaggtagacacaaaaaatagataatggatcctactattaaatggatcaca 30857736  T
Q  309 ctatcattaattatttt 325  Q
    | |||||||||||||||    
T  30857737 ccatcattaattatttt 30857753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 252 - 333
Target Start/End: Original strand, 23259489 - 23259570
Alignment:
Q  252 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    ||||||||||||||||||| ||||||| |  |||||||||| | ||||||| |||||| |||||||||||| ||||||||||    
T  23259489 ttggagagagatagacacaaaaaatagctggtgggtcctactactaagtggatcccaccatcattaattatattttactttt 23259570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 248 - 333
Target Start/End: Original strand, 23459844 - 23459929
Alignment:
Q  248 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    ||||||||||||||||||||||| ||||||  |   |||||||| || ||| |||||||||| |||||||||||||||||||||||    
T  23459844 caatttggagagagatagacacaaaaaataagtggcgggtcctatcactaaatgggtcccaccatcattaattattttttactttt 23459929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 248 - 333
Target Start/End: Original strand, 35315286 - 35315371
Alignment:
Q  248 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    ||||||| |||||||||||||||||||||||||||||| || ||| ||||| || ||||||| || |||||||| |||||| ||||    
T  35315286 caatttgaagagagatagacacataaaatagataatggatcttactattaattgagtcccaccattattaattactttttaatttt 35315371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 248 - 333
Target Start/End: Complemental strand, 38397158 - 38397073
Alignment:
Q  248 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    ||||||| ||||||||||||| |||||||||||| ||||| |||| |||||||| ||||||| |||| |||||| |||||| ||||    
T  38397158 caatttgaagagagatagacaaataaaatagatagtgggtgctactattaagtgagtcccaccatcaataattactttttagtttt 38397073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 206 - 333
Target Start/End: Complemental strand, 2063472 - 2063345
Alignment:
Q  206 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagat-aatgggtcctaccattaagtgggt 304  Q
    |||||| |||||||||||||||| ||||||||| || ||   ||||||||||||||||||||||| |||||||||   | ||||||||||  ||||||||    
T  2063472 gggttaagatcctcttcatttgacaaaataaataga-gtttgcaatttggagagagatagacacaaaaaatagatggtttggtcctaccaccaagtgggt 2063374  T
Q  305 cccactatcattaattattttttactttt 333  Q
     |||| ||||||||| || || |||||||    
T  2063373 tccaccatcattaataatattatactttt 2063345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 205 - 275
Target Start/End: Original strand, 30721564 - 30721632
Alignment:
Q  205 ggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaa 275  Q
    ||||||| ||||| || ||||||||||||||||| |||||||||||||||  |||||||||||||||||||    
T  30721564 ggggttaagatccgctccatttgataaaataaatagaagtacacaatttg--gagagatagacacataaaa 30721632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 213 - 333
Target Start/End: Original strand, 36758825 - 36758944
Alignment:
Q  213 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 312  Q
    |||||||| |||||   |||||||||||||||   ||||||||||||||||||||||| ||| ||  |  ||| ||||| | ||| |||||| |||| ||    
T  36758825 gatcctctccatttataaaaataaatggaagttg-caatttggagagagatagacacaaaaagtaagtggtggatcctatctttaggtgggttccacaat 36758923  T
Q  313 cattaattattttttactttt 333  Q
    |||||||||||||||||||||    
T  36758924 cattaattattttttactttt 36758944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 230 - 333
Target Start/End: Complemental strand, 15722328 - 15722226
Alignment:
Q  230 aaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttac 329  Q
    ||||||||||||| ||  ||||||||| ||||||| ||| |||||||||||| |   |||||||||||| ||||| |||| ||||||||||  |||||||    
T  15722328 aaaataaatggaa-tatgcaatttggaaagagataaacatataaaatagatagtttatcctaccattaaatgggttccaccatcattaattcctttttac 15722230  T
Q  330 tttt 333  Q
    ||||    
T  15722229 tttt 15722226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 206 - 333
Target Start/End: Complemental strand, 35315620 - 35315494
Alignment:
Q  206 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtc 305  Q
    |||||| |||||||| |||||   |||||||||||||| |  ||||||||||||||||| ||||| | ||||| |  ||||||||| ||||||||| |||    
T  35315620 gggttaagatcctctccatttataaaaataaatggaag-atgcaatttggagagagataaacacaaacaataggtggtgggtcctatcattaagtgagtc 35315522  T
Q  306 ccactatcattaattattttttactttt 333  Q
    |  | ||| |||| ||||||||||||||    
T  35315521 cttccatcgttaactattttttactttt 35315494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 279
Target Start/End: Original strand, 22061433 - 22061498
Alignment:
Q  213 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaataga 279  Q
    ||||||||  |||||| |||||||||| |||||  ||||||| ||||||||||||||||||||||||    
T  22061433 gatcctctcaatttgacaaaataaatg-aagtatgcaatttgaagagagatagacacataaaataga 22061498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 333
Target Start/End: Complemental strand, 29188731 - 29188645
Alignment:
Q  248 caatttggagagagatagacacataaaataga-taatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    ||||||||||||||||||||||| ||||   | |  || |||||| || |||| ||||||||| |||||||||||||||||||||||    
T  29188731 caatttggagagagatagacacaaaaaaacaagtggtgcgtcctatcactaagcgggtcccaccatcattaattattttttactttt 29188645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 255 - 328
Target Start/End: Original strand, 4603114 - 4603187
Alignment:
Q  255 gagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattatttttta 328  Q
    |||||||||||||| | | |||| |||||| || |||||||||  |||||||||| |||||||||||| |||||    
T  4603114 gagagagatagacatagacaatatataatgagttctaccattagatgggtcccaccatcattaattatatttta 4603187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 248 - 317
Target Start/End: Complemental strand, 19905958 - 19905889
Alignment:
Q  248 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 317  Q
    |||||| ||||||||||||||||||||||||||  |||| | ||  |||||||| ||||||| |||||||    
T  19905958 caattttgagagagatagacacataaaatagatggtgggacatattattaagtgagtcccaccatcatta 19905889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 333
Target Start/End: Complemental strand, 30803395 - 30803312
Alignment:
Q  250 atttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    ||||| |||||||||||| | ||||||||| || |  ||||| || ||||||| |||||| |||||||||| ||||| ||||||    
T  30803395 atttgtagagagatagacgcctaaaatagacaacgaatcctatcagtaagtggatcccaccatcattaattgtttttcactttt 30803312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 247 - 325
Target Start/End: Complemental strand, 38260370 - 38260294
Alignment:
Q  247 acaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattatttt 325  Q
    ||||||||||||||||||| || | ||||||||   |||||| ||||||||||||  |||||  |||||||||||||||    
T  38260370 acaatttggagagagatagccaaaaaaaatagag--tgggtcttaccattaagtgaatcccataatcattaattatttt 38260294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 333
Target Start/End: Original strand, 3354812 - 3354846
Alignment:
Q  299 gtgggtcccactatcattaattattttttactttt 333  Q
    ||||||||||| |||||||||||||||||||||||    
T  3354812 gtgggtcccaccatcattaattattttttactttt 3354846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 303 - 333
Target Start/End: Complemental strand, 30217512 - 30217482
Alignment:
Q  303 gtcccactatcattaattattttttactttt 333  Q
    |||||||||||||||||||||||||||||||    
T  30217512 gtcccactatcattaattattttttactttt 30217482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 256
Target Start/End: Complemental strand, 6946384 - 6946335
Alignment:
Q  207 ggttaggatcctcttcatttgataaaataaatggaagtacacaatttgga 256  Q
    |||||||||||||  |||||||||||||||||| || | |||||||||||    
T  6946384 ggttaggatcctccccatttgataaaataaatgaaaatgcacaatttgga 6946335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 260 - 328
Target Start/End: Complemental strand, 26800389 - 26800321
Alignment:
Q  260 agatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattatttttta 328  Q
    ||||| |||||||||||||||||| |||||| | ||||| || ||| |   ||||||||||||||||||    
T  26800389 agataaacacataaaatagataataggtcctgctattaaatgagtcacgtcatcattaattatttttta 26800321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 326
Target Start/End: Original strand, 41072961 - 41073025
Alignment:
Q  262 atagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttt 326  Q
    ||||||| ||||||||| |  ||||||||| |||||| ||| || ||| ||||||||||||||||    
T  41072961 atagacatataaaatagttggtgggtcctatcattaaatggatctcacaatcattaattattttt 41073025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 79; Significance: 7e-37; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 207 - 333
Target Start/End: Complemental strand, 42761831 - 42761705
Alignment:
Q  207 ggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcc 306  Q
    ||||||||||||||||| || ||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||| |||||||| | ||||||| |    
T  42761831 ggttaggatcctcttcacttaataaaataaatggaagtacgcaatttgaagagagatagacacataaaatagatagtggatcctaccactcagtgggttc 42761732  T
Q  307 cactatcattaattattttttactttt 333  Q
    ||  |||||||||||||||||| ||||    
T  42761731 catcatcattaattattttttaatttt 42761705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 248 - 333
Target Start/End: Original strand, 26749546 - 26749631
Alignment:
Q  248 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    ||||||||||||||||||||||| ||||||  | |||||||||| || |||||||||||||| |||||||||||||||||||||||    
T  26749546 caatttggagagagatagacacaaaaaataagtgatgggtcctatcactaagtgggtcccaccatcattaattattttttactttt 26749631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 252 - 333
Target Start/End: Original strand, 30426671 - 30426752
Alignment:
Q  252 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    ||||||||||||||||||| |||||||||  |||||||||||| |||||||||||||| |||||||||||| ||||||||||    
T  30426671 ttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattatattttactttt 30426752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 204 - 333
Target Start/End: Complemental strand, 21360400 - 21360268
Alignment:
Q  204 aggggttaggatcctcttcatttgataaaataaatggaag----tacacaatttggagagagatagacacataaaatagataatgggtcctaccattaag 299  Q
    ||||||||||||||||| ||||||||||||||||| ||||    |||| |||||||||||||||| |||||||| ||||||||| | || ||||||||||    
T  21360400 aggggttaggatcctctccatttgataaaataaat-gaagtacatacataatttggagagagataaacacataatatagataatagatcataccattaag 21360302  T
Q  300 tgggtcccactatcattaattattttttactttt 333  Q
    |||  ||||| || |||||||| |||||| ||||    
T  21360301 tggaccccaccattattaattactttttattttt 21360268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 230 - 333
Target Start/End: Original strand, 24557162 - 24557264
Alignment:
Q  230 aaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttac 329  Q
    |||||||||||||| |  ||||||||| ||||||| | ||||||||||| |||||||||||||||||||||| ||||||  ||||||||||| |||||||    
T  24557162 aaaataaatggaag-atgcaatttggaaagagatatagacataaaataggtaatgggtcctaccattaagtgagtcccatcatcattaattactttttac 24557260  T
Q  330 tttt 333  Q
    ||||    
T  24557261 tttt 24557264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 213 - 333
Target Start/End: Complemental strand, 28069831 - 28069711
Alignment:
Q  213 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 312  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||| ||||||| |||||||||  |||||||||||| |||||||||||||| ||    
T  28069831 gatcctctccatttggcaaaataaatggagatttgcaagttggagagagaaagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccat 28069732  T
Q  313 cattaattattttttactttt 333  Q
    |||||||||| ||||| ||||    
T  28069731 cattaattatattttattttt 28069711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 213 - 333
Target Start/End: Complemental strand, 36991468 - 36991348
Alignment:
Q  213 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 312  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||| |  |||||||| ||||||||||||| |||||||||||||| ||    
T  36991468 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacataagaaatagatgatgggtcctaccactaagtgggtcccaccat 36991369  T
Q  313 cattaattattttttactttt 333  Q
    |||||||||| ||| ||||||    
T  36991368 cattaattatatttgactttt 36991348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 230 - 328
Target Start/End: Complemental strand, 18689585 - 18689488
Alignment:
Q  230 aaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattatttttta 328  Q
    ||||||||||||| ||  ||||||||||||||||| ||| |||||||||||| ||| |||||||||||||||||| |||  ||||||||||| ||||||    
T  18689585 aaaataaatggaa-tatgcaatttggagagagataaacatataaaatagatagtggatcctaccattaagtgggttccatcatcattaattacttttta 18689488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 213 - 333
Target Start/End: Complemental strand, 6014307 - 6014186
Alignment:
Q  213 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataa-aatagataatgggtcctaccattaagtgggtcccacta 311  Q
    |||||||| |||||| |||||||||| ||  |   ||||||||||| ||||||||||| || ||||||| || |||||||||||||||||| ||| | ||    
T  6014307 gatcctctccatttgctaaaataaatagagttttgcaatttggagaaagatagacacaaaagaatagatgataggtcctaccattaagtggatcctatta 6014208  T
Q  312 tcattaattattttttactttt 333  Q
    ||||||||||| ||||||||||    
T  6014207 tcattaattatgttttactttt 6014186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 211 - 328
Target Start/End: Original strand, 42338008 - 42338124
Alignment:
Q  211 aggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccact 310  Q
    ||||||||||||||||||||||||||||  ||||| | |||||||||||| ||| |||  ||||||||||| ||| |  ||| |||||||| ||||| |     
T  42338008 aggatcctcttcatttgataaaataaat-taagtatataatttggagagatatatacatgtaaaatagatagtggattgtactattaagtgtgtccctcc 42338106  T
Q  311 atcattaattatttttta 328  Q
    ||||||||||| ||||||    
T  42338107 atcattaattacttttta 42338124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 250 - 325
Target Start/End: Original strand, 36748492 - 36748566
Alignment:
Q  250 atttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattatttt 325  Q
    ||||||||| ||||||||||| |||||||| |  ||||||||||||||||||| |||||| |||||||||||||||    
T  36748492 atttggagatagatagacaca-aaaatagacagcgggtcctaccattaagtggatcccaccatcattaattatttt 36748566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 252 - 333
Target Start/End: Original strand, 40695249 - 40695330
Alignment:
Q  252 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    ||||||||||||||||||| |||||||||  | |||||||||| |||||| || |||| ||||||| |||| ||||||||||    
T  40695249 ttggagagagatagacacaaaaaatagatggtaggtcctaccactaagtgagttccaccatcattagttatattttactttt 40695330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 257 - 329
Target Start/End: Original strand, 10672519 - 10672591
Alignment:
Q  257 gagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttac 329  Q
    |||||||||||||| |||||||||  ||| |||||||| |||||| ||||||| |||||||||||| ||||||    
T  10672519 gagagatagacacaaaaaatagatggtggatcctaccactaagtgagtcccaccatcattaattatattttac 10672591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 206 - 333
Target Start/End: Complemental strand, 45113390 - 45113262
Alignment:
Q  206 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataa-aatagataatgggtcctaccattaagtgggt 304  Q
    |||||| |||||||| |||||| |||||||||| |   |   ||||||||||||| ||||||||| || |||||||  ||||||| |||| |||||| ||    
T  45113390 gggttaagatcctctccatttgctaaaataaattgtgttttgcaatttggagagacatagacacaaaagaatagatggtgggtccaaccactaagtgtgt 45113291  T
Q  305 cccactatcattaattattttttactttt 333  Q
    ||||  |||||||||||||||||| ||||    
T  45113290 cccatcatcattaattattttttattttt 45113262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 248 - 333
Target Start/End: Original strand, 1937152 - 1937238
Alignment:
Q  248 caatttggagagagatagacacataaaataga-taatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    ||||||||||||||||||||||| ||||   | |  ||||||||| || |||| ||||||||| |||||||||||||||||||||||    
T  1937152 caatttggagagagatagacacaaaaaaacaagtggtgggtcctatcactaagcgggtcccaccatcattaattattttttactttt 1937238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 287 - 333
Target Start/End: Original strand, 6148997 - 6149043
Alignment:
Q  287 tcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||||    
T  6148997 tcctatcattaagtggatcccactatcattaattattttttactttt 6149043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 204 - 333
Target Start/End: Original strand, 10652571 - 10652701
Alignment:
Q  204 aggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtggg 303  Q
    |||||| | |||||||| |||||| ||||||||||||   |   ||| ||||||||||||||| ||| ||||| |||  |||||| ||| | ||| ||||    
T  10652571 aggggtgaagatcctctccatttggtaaaataaatggtgttttgcaagttggagagagatagatacaaaaaattgatggtgggtcatactactaattggg 10652670  T
Q  304 tcccactatcattaattat-tttttactttt 333  Q
    |||||| |||||||||||| |||||||||||    
T  10652671 tcccaccatcattaattatatttttactttt 10652701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 248 - 326
Target Start/End: Complemental strand, 17520459 - 17520381
Alignment:
Q  248 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttt 326  Q
    ||||||||||||| ||||||||||||||||||||  | ||||||| ||||||||||| | || || ||||||| |||||    
T  17520459 caatttggagagatatagacacataaaatagatagcgagtcctactattaagtgggttctaccattattaatttttttt 17520381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 249 - 327
Target Start/End: Complemental strand, 34612640 - 34612562
Alignment:
Q  249 aatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattatttttt 327  Q
    ||||| |||||||||||||||| ||||||  |  ||||||||| || |||||||||| ||| |||||||||||||||||    
T  34612640 aatttagagagagatagacacaaaaaataagtggtgggtcctatcactaagtgggtctcaccatcattaattatttttt 34612562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 333
Target Start/End: Original strand, 28318924 - 28318985
Alignment:
Q  272 aaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    |||| ||||| |||||||||||| ||||||||||| || |||||||||||| ||||||||||    
T  28318924 aaaaaagatagtgggtcctaccactaagtgggtccaaccatcattaattatattttactttt 28318985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 252 - 333
Target Start/End: Complemental strand, 41511335 - 41511254
Alignment:
Q  252 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    ||||| ||||||||| | | |||||||||| ||||||||| || ||||||| | |||| |||||||||||| ||||||||||    
T  41511335 ttggaaagagatagatataaaaaatagatagtgggtcctatcactaagtggtttccaccatcattaattatattttactttt 41511254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 258 - 333
Target Start/End: Complemental strand, 6399991 - 6399916
Alignment:
Q  258 agagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    ||||||||||||| |||||||||  |||||| ||  |  |||||| ||||| ||||||||||||||||||||||||    
T  6399991 agagatagacacaaaaaatagatggtgggtcttattaccaagtggatcccattatcattaattattttttactttt 6399916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 333
Target Start/End: Original strand, 37966397 - 37966525
Alignment:
Q  203 gaggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgg 302  Q
    ||||||||| |||||||| ||||||  ||||||||||||| |   ||||||| ||||||||| ||||| |||||||||  | |||||||||| ||| | |    
T  37966397 gaggggttaagatcctctccatttggcaaaataaatggaa-tttgcaatttgaagagagataaacacaaaaaatagattgtaggtcctaccactaa-ttg 37966494  T
Q  303 gtcccactatcattaattattttttactttt 333  Q
      |||| || |||||||||| ||||||||||    
T  37966495 aacccaataccattaattatattttactttt 37966525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 248 - 333
Target Start/End: Original strand, 3763520 - 3763605
Alignment:
Q  248 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    |||||||||||| | |||||| | |||| || |  |||||||||||||||||||||| ||||  |||||||||  |||||||||||    
T  3763520 caatttggagagtggtagacaaaaaaaaaaggtggtgggtcctaccattaagtgggttccaccgtcattaattgctttttactttt 3763605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 296 - 333
Target Start/End: Complemental strand, 30796307 - 30796270
Alignment:
Q  296 taagtgggtcccactatcattaattattttttactttt 333  Q
    |||||||||||||| |||||||||||||||||||||||    
T  30796307 taagtgggtcccaccatcattaattattttttactttt 30796270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 333
Target Start/End: Original strand, 44859189 - 44859250
Alignment:
Q  272 aaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    |||||||||  ||||| |||||| |||||||||||||| |||||||||||| ||||| ||||    
T  44859189 aaaatagatggtgggttctaccactaagtgggtcccaccatcattaattatattttattttt 44859250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 268
Target Start/End: Complemental strand, 20169190 - 20169125
Alignment:
Q  202 agaggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagaca 268  Q
    |||||||||| |||||||| |||||   |||||||||||||| |  |||||||||||||||||||||    
T  20169190 agaggggttaagatcctctccatttataaaaataaatggaag-atgcaatttggagagagatagaca 20169125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 322
Target Start/End: Complemental strand, 24102085 - 24102019
Alignment:
Q  256 agagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattat 322  Q
    ||||||||||||| | |||||||||  ||| |||||||| |||||| || |||| ||||||||||||    
T  24102085 agagagatagacataaaaaatagatggtggatcctaccactaagtgagttccaccatcattaattat 24102019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 333
Target Start/End: Complemental strand, 24241608 - 24241567
Alignment:
Q  292 ccattaagtgggtcccactatcattaattattttttactttt 333  Q
    |||||||||||||  ||| |||||||||||||||||||||||    
T  24241608 ccattaagtgggtttcaccatcattaattattttttactttt 24241567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 323
Target Start/End: Complemental strand, 21486993 - 21486925
Alignment:
Q  255 gagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattatt 323  Q
    ||||||||| || | | |||||| ||| ||||| |||| |||||||| ||||||| |||||||||||||    
T  21486993 gagagagatggatataaaaaatatatagtgggttctactattaagtgagtcccaccatcattaattatt 21486925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 333
Target Start/End: Complemental strand, 24241705 - 24241673
Alignment:
Q  301 gggtcccactatcattaattattttttactttt 333  Q
    ||||||||| |||||||||||||||||||||||    
T  24241705 gggtcccaccatcattaattattttttactttt 24241673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 1e-28; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 213 - 321
Target Start/End: Complemental strand, 29341106 - 29340999
Alignment:
Q  213 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 312  Q
    |||||||| |||||| || |||||||||| |||  ||||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||| ||    
T  29341106 gatcctctccatttggtataataaatgga-gtatgcaatttggagagagatagacacagaaaatagatagtgggtcctactattaagtgggtcccaccat 29341008  T
Q  313 cattaatta 321  Q
    |||||||||    
T  29341007 cattaatta 29340999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 213 - 333
Target Start/End: Original strand, 35660572 - 35660692
Alignment:
Q  213 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 312  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  |||||||||||| |||||||||||||| ||    
T  35660572 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccat 35660671  T
Q  313 cattaattattttttactttt 333  Q
    |||||||||| ||||||||||    
T  35660672 cattaattatattttactttt 35660692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 214 - 333
Target Start/End: Original strand, 4895699 - 4895818
Alignment:
Q  214 atcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatc 313  Q
    |||||||| |||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  |||||||||||| |||||||||||||| |||    
T  4895699 atcctctttatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatc 4895798  T
Q  314 attaattattttttactttt 333  Q
    ||||||||| ||||||||||    
T  4895799 attaattatattttactttt 4895818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 213 - 333
Target Start/End: Complemental strand, 11775905 - 11775785
Alignment:
Q  213 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 312  Q
    |||||||| |||||| |||||||||||||  |   ||| ||||||||||||||||||| |||||||||  ||| |||||||| ||||||||||||||  |    
T  11775905 gatcctctccatttggtaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggatcctaccactaagtgggtcccaccgt 11775806  T
Q  313 cattaattattttttactttt 333  Q
    |||||||||| ||||||||||    
T  11775805 cattaattatattttactttt 11775785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 213 - 333
Target Start/End: Original strand, 32129580 - 32129700
Alignment:
Q  213 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 312  Q
    |||||||| ||||||  ||||||||||||  |  | || ||||||||||||||||||  |||||||||  |||||||||||| |||||||||||||| ||    
T  32129580 gatcctctccatttggcaaaataaatggagttttataagttggagagagatagacaccaaaaatagatggtgggtcctaccactaagtgggtcccaccat 32129679  T
Q  313 cattaattattttttactttt 333  Q
    |||||||||| ||||||||||    
T  32129680 cattaattatattttactttt 32129700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 252 - 333
Target Start/End: Complemental strand, 14349876 - 14349795
Alignment:
Q  252 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    ||||||||||| ||||||| |||||||||  |||||||||||| |||||||||||||| |||||||||||| ||||||||||    
T  14349876 ttggagagagacagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattatattttactttt 14349795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 213 - 333
Target Start/End: Original strand, 18625384 - 18625504
Alignment:
Q  213 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 312  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||| ||||||| |||||||||  |||||||||||| |||||||||||||| ||    
T  18625384 gatcctctccatttggcaaaataaatggagatttgcaagttggagagagaaagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccat 18625483  T
Q  313 cattaattattttttactttt 333  Q
    |||||||||| ||||| ||||    
T  18625484 cattaattatattttattttt 18625504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 213 - 333
Target Start/End: Complemental strand, 37266843 - 37266723
Alignment:
Q  213 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 312  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  |||||| ||||| |||||||||||||| ||    
T  37266843 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcataccactaagtgggtcccaccat 37266744  T
Q  313 cattaattattttttactttt 333  Q
    |||||||||| ||||| ||||    
T  37266743 cattaattatattttagtttt 37266723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 248 - 333
Target Start/End: Original strand, 10362012 - 10362097
Alignment:
Q  248 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    ||||| ||||||||||||| ||||||||| | || ||| ||||||||||||||||||| |||  ||||||||||||||||||||||    
T  10362012 caattaggagagagatagagacataaaattggtagtggatcctaccattaagtgggtctcaccgtcattaattattttttactttt 10362097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 248 - 333
Target Start/End: Complemental strand, 36290679 - 36290594
Alignment:
Q  248 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    ||||||||||||||||||||||| ||||||  |  ||||||||| || ||||||| |||||| |||||||||||||||||||||||    
T  36290679 caatttggagagagatagacacaaaaaataagtggtgggtcctatcactaagtggatcccaccatcattaattattttttactttt 36290594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 252 - 333
Target Start/End: Original strand, 40753164 - 40753245
Alignment:
Q  252 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    ||||||| ||||||||||| |||||| ||  |||||||||||| |||||||||||||| |||||||||||| ||||||||||    
T  40753164 ttggagaaagatagacacaaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttactttt 40753245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 213 - 325
Target Start/End: Complemental strand, 43309220 - 43309108
Alignment:
Q  213 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 312  Q
    ||||||||| |||||||||||||||||||  |   ||| ||||||||||||||||| | |||||||||| ||| || ||||||||| ||||| |||| ||    
T  43309220 gatcctctttatttgataaaataaatggagttttgcaagttggagagagatagacataaaaaatagatagtggatcttaccattaaatgggttccaccat 43309121  T
Q  313 cattaattatttt 325  Q
    |||||||| ||||    
T  43309120 cattaattttttt 43309108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 230 - 333
Target Start/End: Complemental strand, 34827287 - 34827184
Alignment:
Q  230 aaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttac 329  Q
    ||||||||||||  ||  ||| ||||||||||||||||| | |||||||||  ||| |||||||| |||||||||||||| ||| |||||||| ||||||    
T  34827287 aaaataaatggagttatgcaagttggagagagatagacaaaaaaaatagatggtggatcctaccactaagtgggtcccaccatctttaattatattttac 34827188  T
Q  330 tttt 333  Q
    ||||    
T  34827187 tttt 34827184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 215 - 333
Target Start/End: Complemental strand, 39902525 - 39902407
Alignment:
Q  215 tcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatca 314  Q
    |||||| ||||||| ||||||||||||  |  |||| ||||||||||||| |||||  ||||||||  |||||||||||| ||| ||| | |||| ||||    
T  39902525 tcctctccatttgacaaaataaatggagttttacaagttggagagagataaacacaagaaatagatggtgggtcctaccactaaatggattccaccatca 39902426  T
Q  315 ttaattattttttactttt 333  Q
    |||||||| ||||||||||    
T  39902425 ttaattatattttactttt 39902407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 249 - 333
Target Start/End: Original strand, 2984389 - 2984473
Alignment:
Q  249 aatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    |||||||||||||||||||||||||||||  | |||  ||||| || ||| |||||||||| |||||||||||||||||| ||||    
T  2984389 aatttggagagagatagacacataaaataagtgatgaatcctatcactaaatgggtcccaccatcattaattattttttattttt 2984473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 213 - 333
Target Start/End: Complemental strand, 13032230 - 13032110
Alignment:
Q  213 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 312  Q
    |||||||| ||||||  ||||||||||||  |   ||| |||||||||||||||||||  ||||||||  || ||||||||| ||| |||||||||| ||    
T  13032230 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaagaaatagatggtgagtcctaccactaaatgggtcccaccat 13032131  T
Q  313 cattaattattttttactttt 333  Q
    |||||||||| ||||| ||||    
T  13032130 cattaattatattttattttt 13032110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 248 - 328
Target Start/End: Complemental strand, 31653112 - 31653032
Alignment:
Q  248 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattatttttta 328  Q
    ||||||||||||||||| ||||||||||||||||  | ||||||| |||||||| ||| ||| ||||||||||| ||||||    
T  31653112 caatttggagagagataaacacataaaatagatagcgagtcctactattaagtgagtctcacaatcattaattacttttta 31653032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 248 - 333
Target Start/End: Original strand, 3057152 - 3057237
Alignment:
Q  248 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    ||||||||| ||||||| ||||| |||||||||  ||| ||||||||||||||| ||| ||  |||||||||||| ||||||||||    
T  3057152 caatttggatagagataaacacaaaaaatagatggtggatcctaccattaagtgagtcacataatcattaattatattttactttt 3057237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 248 - 333
Target Start/End: Complemental strand, 18653438 - 18653353
Alignment:
Q  248 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    ||||||| ||||||||||||||| |||||||||| || || ||||||||||||| ||| ||| || | |||||||||| |||||||    
T  18653438 caatttgaagagagatagacacaaaaaatagatagtgagttctaccattaagtgagtctcaccattaataattattttatactttt 18653353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 248 - 331
Target Start/End: Complemental strand, 41660183 - 41660100
Alignment:
Q  248 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactt 331  Q
    ||||||||||||||||||||||| ||||||  |  ||||||  | || || ||||||||||| |||||||||||||||||||||    
T  41660183 caatttggagagagatagacacaaaaaataagtggtgggtctcatcactaggtgggtcccaccatcattaattattttttactt 41660100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 267 - 333
Target Start/End: Complemental strand, 4592858 - 4592792
Alignment:
Q  267 cacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    |||| |||||||||  |||||| ||||| |||||||||||||| |||||||||||| ||||||||||    
T  4592858 cacaaaaaatagatggtgggtcttaccactaagtgggtcccaccatcattaattatattttactttt 4592792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 333
Target Start/End: Complemental strand, 14688643 - 14688566
Alignment:
Q  256 agagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    |||||||| ||||||||||||||||| ||| | |||||||||||||| | |||| |||||||  ||||||| ||||||    
T  14688643 agagagatcgacacataaaatagatattggattctaccattaagtggattccaccatcattagatatttttgactttt 14688566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 249 - 325
Target Start/End: Complemental strand, 31279990 - 31279914
Alignment:
Q  249 aatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattatttt 325  Q
    ||||||||||| | ||||||||||||||| ||  ||||||||| ||||| |||||||| || || ||||||||||||    
T  31279990 aatttggagagtgctagacacataaaataaattgtgggtcctatcattatgtgggtcctaccataattaattatttt 31279914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 206 - 333
Target Start/End: Complemental strand, 3057534 - 3057408
Alignment:
Q  206 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtc 305  Q
    |||||| |||||||| |||||  |||||||||| || ||   ||||| ||||||||||||||| | |||| |||| |||| ||||||||  ||||| ||     
T  3057534 gggttaagatcctctccattttgtaaaataaataga-gttttcaattcggagagagatagacaaaaaaaaaagatgatggatcctaccacaaagtgagtt 3057436  T
Q  306 ccactatcattaattattttttactttt 333  Q
    |||  ||||||||||||||| |||||||    
T  3057435 ccatcatcattaattattttatactttt 3057408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 258 - 325
Target Start/End: Complemental strand, 43222193 - 43222126
Alignment:
Q  258 agagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattatttt 325  Q
    ||||||||||||| |||||||||  |||||| || |||||| ||| |||||| |||||||||||||||    
T  43222193 agagatagacacaaaaaatagatggtgggtcttatcattaaatggatcccaccatcattaattatttt 43222126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 277
Target Start/End: Original strand, 9460597 - 9460662
Alignment:
Q  211 aggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaata 277  Q
    |||||||||| |||||| |||||||||| || |||  ||||||||||||||||||||||||| ||||    
T  9460597 aggatcctctccatttggtaaaataaataga-gtatgcaatttggagagagatagacacatataata 9460662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 318
Target Start/End: Original strand, 27428879 - 27428949
Alignment:
Q  248 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaa 318  Q
    ||||||||| ||||||||||||| |||||||||  ||  ||||||||||||||| || |||| ||||||||    
T  27428879 caatttggaaagagatagacacaaaaaatagatggtgaatcctaccattaagtgagttccaccatcattaa 27428949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 333
Target Start/End: Original strand, 28142812 - 28142858
Alignment:
Q  287 tcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    ||||||||||||||| ||||||| |||||||||||| ||||||||||    
T  28142812 tcctaccattaagtgagtcccaccatcattaattatattttactttt 28142858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 248 - 333
Target Start/End: Complemental strand, 31546563 - 31546478
Alignment:
Q  248 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    ||||||| |||||| |||||| |||||||||||  |||| ||||| ||||||||| |||||  || |||||||| |||||| ||||    
T  31546563 caatttgaagagaggtagacatataaaatagatggtgggccctactattaagtggatcccatcataattaattactttttagtttt 31546478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 333
Target Start/End: Complemental strand, 17247482 - 17247398
Alignment:
Q  249 aatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    ||||| ||||||||||||| || ||||||| |  ||||| ||| ||||||||| || |||  || ||||||||||||||||||||    
T  17247482 aatttagagagagatagacgcaaaaaataggtggtgggttctatcattaagtgcgttccatcataattaattattttttactttt 17247398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 247 - 326
Target Start/End: Complemental strand, 38283855 - 38283776
Alignment:
Q  247 acaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttt 326  Q
    |||||||||||||| ||||||||||||| ||| |  |||||| || |||||| |  |||  |||||||||||||||||||    
T  38283855 acaatttggagagatatagacacataaagtaggtggtgggtcatatcattaaataagtctgactatcattaattattttt 38283776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 283 - 333
Target Start/End: Original strand, 3041341 - 3041391
Alignment:
Q  283 tgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    ||||||||| || |||| ||||||||| |||||||||||||||||| ||||    
T  3041341 tgggtcctatcactaagcgggtcccaccatcattaattattttttattttt 3041391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 240
Target Start/End: Complemental strand, 21213987 - 21213953
Alignment:
Q  206 gggttaggatcctcttcatttgataaaataaatgg 240  Q
    ||||||||||||||| |||||||||||||||||||    
T  21213987 gggttaggatcctctccatttgataaaataaatgg 21213953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 333
Target Start/End: Original strand, 8440981 - 8441054
Alignment:
Q  260 agatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    ||||||||||  |||||||||  || | | ||||| |||||| ||||||| |||||||||||| ||||||||||    
T  8440981 agatagacaccaaaaatagatggtgcgacataccactaagtgtgtcccaccatcattaattatattttactttt 8441054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 1e-28; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 213 - 333
Target Start/End: Original strand, 19901881 - 19902001
Alignment:
Q  213 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 312  Q
    |||||||| |||||| |||||||||||||  |   ||| ||||||||||||||||||| |||||||||  |||||||||||| |||||||||||||| ||    
T  19901881 gatcctctccatttggtaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccat 19901980  T
Q  313 cattaattattttttactttt 333  Q
    |||||||||| ||||||||||    
T  19901981 cattaattatattttactttt 19902001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 208 - 333
Target Start/End: Complemental strand, 36532741 - 36532618
Alignment:
Q  208 gttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtccc 307  Q
    |||| |||||||| ||| |||||||||||||||| || |||||||| ||||||||||||||||||||||| ||| ||| ||||| |||| ||||||| ||    
T  36532741 gttaagatcctctccatctgataaaataaatgga-gttcacaatttagagagagatagacacataaaataaatagtggatcctatcattcagtgggttcc 36532643  T
Q  308 actatcattaattattttttactttt 333  Q
    || || ||||||||||||||||||||    
T  36532642 accat-attaattattttttactttt 36532618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 213 - 333
Target Start/End: Original strand, 5416429 - 5416548
Alignment:
Q  213 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 312  Q
    |||||||| ||||||| ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  |||||||||||| |||||||||||||| ||    
T  5416429 gatcctctccatttgacaaaataaatggagttttgcaagttggagagagatagacaca-aaaatagattgtgggtcctaccactaagtgggtcccaccat 5416527  T
Q  313 cattaattattttttactttt 333  Q
    |||||||||| ||||||||||    
T  5416528 cattaattatattttactttt 5416548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 213 - 333
Target Start/End: Complemental strand, 23610754 - 23610634
Alignment:
Q  213 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 312  Q
    |||||||| ||||||||||||||||||||  |   ||| ||||||||||||||||||| |||||||||  |||||| ||||| |||||||||||||| ||    
T  23610754 gatcctctccatttgataaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcataccactaagtgggtcccaccat 23610655  T
Q  313 cattaattattttttactttt 333  Q
    |||||| ||| ||||||||||    
T  23610654 cattaaatatattttactttt 23610634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 206 - 333
Target Start/End: Original strand, 56453777 - 56453903
Alignment:
Q  206 gggttaggatcctcttcatttgata-aaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggt 304  Q
    |||||| |||||||| ||||| ||| ||||||||||||| |  ||||||||||||||||||||||| ||||||| |  ||||||||| ||||||||||||    
T  56453777 gggttaagatcctctccattt-atagaaataaatggaag-atgcaatttggagagagatagacacaaaaaataggtggtgggtcctatcattaagtgggt 56453874  T
Q  305 cccactatcattaattattttttactttt 333  Q
    ||||| |||||| ||||||||||||||||    
T  56453875 cccaccatcattcattattttttactttt 56453903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 204 - 333
Target Start/End: Complemental strand, 56558400 - 56558271
Alignment:
Q  204 aggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtggg 303  Q
    |||||| | |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  ||||||||| || ||||||||    
T  56558400 aggggtgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctatcactaagtggg 56558301  T
Q  304 tcccactatcattaattattttttactttt 333  Q
    |||||| |||||||||||| ||||||||||    
T  56558300 tcccaccatcattaattatattttactttt 56558271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 210 - 333
Target Start/End: Original strand, 42844148 - 42844270
Alignment:
Q  210 taggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccac 309  Q
    ||||||||||| ||| | ||||||||||| ||  || |||||||||||| |||||||||||||||||||| | || ||||||| ||||| ||| |||| |    
T  42844148 taggatcctctccatattataaaataaatagagtta-acaatttggagatagatagacacataaaatagagagtgtgtcctactattaaatggatccctc 42844246  T
Q  310 tatcattaattattttttactttt 333  Q
     |||||||||||||||||||||||    
T  42844247 catcattaattattttttactttt 42844270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 247 - 333
Target Start/End: Original strand, 5763159 - 5763245
Alignment:
Q  247 acaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    |||| ||||||||||||||| ||| |||||||||  |||||||||||| |||||||||||||| |||||||||||| ||||||||||    
T  5763159 acaagttggagagagatagaaacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattatattttactttt 5763245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 209 - 325
Target Start/End: Complemental strand, 1871392 - 1871277
Alignment:
Q  209 ttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtccca 308  Q
    ||||||||||||  |||||| |||||||||||| |||  ||||||||||||||||||||| | || ||||||| ||| |||||| | |||||||||||||    
T  1871392 ttaggatcctctcaatttgacaaaataaatgga-gtatgcaatttggagagagatagacaaaaaatatagatagtggatcctactactaagtgggtccca 1871294  T
Q  309 ctatcattaattatttt 325  Q
      |||||||||||||||    
T  1871293 tcatcattaattatttt 1871277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 213 - 333
Target Start/End: Original strand, 3952133 - 3952253
Alignment:
Q  213 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 312  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||| | |||||||||  |||||||||||| |||||||||| ||| ||    
T  3952133 gatcctctccatttggcaaaataaatggagtttggcaagttggagagagatagacaaaaaaaatagatggtgggtcctaccactaagtgggtctcaccat 3952232  T
Q  313 cattaattattttttactttt 333  Q
    |||||||||| ||||||||||    
T  3952233 cattaattatattttactttt 3952253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 213 - 333
Target Start/End: Complemental strand, 34778533 - 34778413
Alignment:
Q  213 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 312  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||| ||||||||||||||| |||||||||  ||| |||||||| |||||||||||||| ||    
T  34778533 gatcctctccatttggcaaaataaatggagttttgcaagttgaagagagatagacacaaaaaatagatggtggatcctaccactaagtgggtcccaccat 34778434  T
Q  313 cattaattattttttactttt 333  Q
    |||||||||| ||||||||||    
T  34778433 cattaattatattttactttt 34778413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 248 - 327
Target Start/End: Original strand, 56269074 - 56269153
Alignment:
Q  248 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattatttttt 327  Q
    ||||||||||||||||||||||| ||||||  |  |||||||||||| |||||||||||||| |||||||||||||||||    
T  56269074 caatttggagagagatagacacaaaaaataagtggtgggtcctaccactaagtgggtcccaccatcattaattatttttt 56269153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 248 - 333
Target Start/End: Complemental strand, 5524524 - 5524439
Alignment:
Q  248 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    ||||||||||||||||||||| | ||||||  |  ||||||||| || |||||||||||||| |||||||||||||||||||||||    
T  5524524 caatttggagagagatagacataaaaaataagtggtgggtcctatcagtaagtgggtcccaccatcattaattattttttactttt 5524439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 214 - 333
Target Start/End: Original strand, 5815267 - 5815383
Alignment:
Q  214 atcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatc 313  Q
    ||||||| ||||||||||||||||||| |||||| ||||| |||||||||||||||  |||||| |||||||||| ||||| |||||  |||  || |||    
T  5815267 atcctctccatttgataaaataaatgg-agtacaaaattttgagagagatagacac--aaaatatataatgggtcataccactaagtaagtcggaccatc 5815363  T
Q  314 attaattattttttactttt 333  Q
     ||||| |||||||||||||    
T  5815364 tttaataattttttactttt 5815383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 248 - 328
Target Start/End: Original strand, 48914516 - 48914596
Alignment:
Q  248 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattatttttta 328  Q
    |||||| ||||||||| ||||||||||||||||  ||||||||| ||| |||||||| || ||||||||||||||||||||    
T  48914516 caatttagagagagatcgacacataaaatagattgtgggtcctatcataaagtgggttccgctatcattaattatttttta 48914596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 205 - 326
Target Start/End: Original strand, 15178628 - 15178738
Alignment:
Q  205 ggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggt 304  Q
    ||||||||||| |||| ||||||||||||| |||||||||||| |||||| ||||||||| |||||||||||            |||| |||||||||||    
T  15178628 ggggttaggattctctccatttgataaaatgaatggaagtacataatttgaagagagataaacacataaaatt-----------ctactattaagtgggt 15178716  T
Q  305 cccactatcattaattattttt 326  Q
    |||||| |||||||||||||||    
T  15178717 cccactttcattaattattttt 15178738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 208 - 333
Target Start/End: Original strand, 47922324 - 47922450
Alignment:
Q  208 gttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataa-aatagataatgggtcctaccattaagtgggtcc 306  Q
    |||| |||||||| |||||| |||||||||| ||  |   ||||||||||||| ||||||||| || |||||||  |||||||||||| |||||||||||    
T  47922324 gttaagatcctctccatttgctaaaataaattgagttttgcaatttggagagatatagacacaaaagaatagatggtgggtcctaccactaagtgggtcc 47922423  T
Q  307 cactatcattaattattttttactttt 333  Q
    ||  |||  ||||||||||||||||||    
T  47922424 catcatctataattattttttactttt 47922450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 248 - 333
Target Start/End: Complemental strand, 23474188 - 23474103
Alignment:
Q  248 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    |||||||| ||||||||||||||||||||||||  |||||||||| ||| ||||  |||||| ||||||||||| |||||| ||||    
T  23474188 caatttggggagagatagacacataaaatagatggtgggtcctactattgagtgaatcccaccatcattaattactttttaatttt 23474103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 256 - 333
Target Start/End: Complemental strand, 30567970 - 30567893
Alignment:
Q  256 agagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    ||||||||||||||| |||||||||  |||||||||||| ||||||||| |||  |||||||||||| ||||||||||    
T  30567970 agagagatagacacaaaaaatagatggtgggtcctaccactaagtgggttccatcatcattaattatattttactttt 30567893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 213 - 329
Target Start/End: Original strand, 18207003 - 18207119
Alignment:
Q  213 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 312  Q
    |||||||| ||||||| |||||||||| |  |   ||| || |||||||||||||| | |||||||||  |||||||||||| |||||||||||||  ||    
T  18207003 gatcctctccatttgacaaaataaatgtagttttgcaagttagagagagatagacaaaaaaaatagatggtgggtcctaccactaagtgggtcccatcat 18207102  T
Q  313 cattaattattttttac 329  Q
    |||||||||| ||||||    
T  18207103 cattaattatattttac 18207119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 213 - 333
Target Start/End: Complemental strand, 39862629 - 39862509
Alignment:
Q  213 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 312  Q
    |||||||| ||||||||||||||||| ||| |   ||| || |||||||||||||||| |||||||||  || |||||| || ||| || || |||| ||    
T  39862629 gatcctctccatttgataaaataaatagaattttgcaagtttgagagagatagacacaaaaaatagatggtgtgtcctatcactaaatgagttccaccat 39862530  T
Q  313 cattaattattttttactttt 333  Q
    |||||||||| ||||||||||    
T  39862529 cattaattatattttactttt 39862509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 252 - 322
Target Start/End: Complemental strand, 24073689 - 24073619
Alignment:
Q  252 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattat 322  Q
    |||||||||||||||||||  ||||||||  |||||||||||| |||||||||||| | ||||||||||||    
T  24073689 ttggagagagatagacacaacaaatagatggtgggtcctaccactaagtgggtcccgccatcattaattat 24073619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 255 - 333
Target Start/End: Original strand, 33262557 - 33262635
Alignment:
Q  255 gagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    |||||||||||||||| |||||||||  ||| |||||||| ||| | |||||||| |||||||||||| ||||||||||    
T  33262557 gagagagatagacacaaaaaatagatggtggatcctaccactaaataggtcccaccatcattaattatattttactttt 33262635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 248 - 326
Target Start/End: Original strand, 36688186 - 36688264
Alignment:
Q  248 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttt 326  Q
    ||||||||||||||||||||||| ||||||  |  || |||||| || |||||||||||||| ||||||||||||||||    
T  36688186 caatttggagagagatagacacaaaaaataagtgttgagtcctatcactaagtgggtcccaccatcattaattattttt 36688264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 248 - 333
Target Start/End: Original strand, 37002249 - 37002334
Alignment:
Q  248 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    ||||||||| ||||||||||||| ||||||  |  ||| |||||  | |||||||||||||| |||||||||||||||||||||||    
T  37002249 caatttggaaagagatagacacaaaaaataagtggtggatcctattactaagtgggtcccaccatcattaattattttttactttt 37002334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 248 - 333
Target Start/End: Complemental strand, 42010194 - 42010109
Alignment:
Q  248 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    ||||||||||||||||||| ||| ||||||  |   |||||||| || ||| |||||||||| |||||||||||||||||||||||    
T  42010194 caatttggagagagatagatacaaaaaataagtggcgggtcctatcactaaatgggtcccaccatcattaattattttttactttt 42010109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 213 - 332
Target Start/End: Original strand, 12312438 - 12312558
Alignment:
Q  213 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaa-tagataatgggtcctaccattaagtgggtcccacta 311  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||| | |||| |||||  ||| |||||||| |||||||||||||  |    
T  12312438 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacaaaaaaaaatagatggtggatcctaccactaagtgggtcccatca 12312537  T
Q  312 tcattaattattttttacttt 332  Q
    ||||||||||| |||||||||    
T  12312538 tcattaattatattttacttt 12312558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 213 - 333
Target Start/End: Original strand, 33247093 - 33247213
Alignment:
Q  213 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 312  Q
    |||||||| ||||||  ||||||||||||  |   ||| |||||||||||||||||||  ||||||||  ||||| |||||| ||| ||||| |||| ||    
T  33247093 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaagaaatagatggtgggttctaccactaaatgggttccaccat 33247192  T
Q  313 cattaattattttttactttt 333  Q
    |||||||||| ||||| ||||    
T  33247193 cattaattatattttattttt 33247213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 285 - 333
Target Start/End: Complemental strand, 46804671 - 46804623
Alignment:
Q  285 ggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||||    
T  46804671 ggtcctaccattaagtgggtccaactatcattaattactttttactttt 46804623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 248 - 327
Target Start/End: Original strand, 1015852 - 1015931
Alignment:
Q  248 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattatttttt 327  Q
    |||||| |||||||||||||||| ||||||  |  ||||||| | ||||| ||||||||||| |||||||||||||||||    
T  1015852 caatttagagagagatagacacaaaaaataagtggtgggtcccatcattaggtgggtcccaccatcattaattatttttt 1015931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 248 - 323
Target Start/End: Original strand, 50483554 - 50483629
Alignment:
Q  248 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattatt 323  Q
    ||||||||||| |||||||||| ||||||||||| | | ||| ||||||||||| ||| || ||||||||||||||    
T  50483554 caatttggagacagatagacacgtaaaatagatattcgatcccaccattaagtgagtcacattatcattaattatt 50483629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 283 - 333
Target Start/End: Original strand, 12241441 - 12241491
Alignment:
Q  283 tgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    |||||||||||| |||||||||||||| |||||||||||| ||||||||||    
T  12241441 tgggtcctaccactaagtgggtcccaccatcattaattatattttactttt 12241491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 287 - 333
Target Start/End: Original strand, 31862257 - 31862303
Alignment:
Q  287 tcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    |||||||| |||||||||||||| |||||||||||||||||||||||    
T  31862257 tcctaccactaagtgggtcccaccatcattaattattttttactttt 31862303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 255 - 333
Target Start/End: Original strand, 38079725 - 38079803
Alignment:
Q  255 gagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    ||||||||||||||||  ||||||||  |||||||||| | ||||||| | |||| |||||||||||| ||||||||||    
T  38079725 gagagagatagacacaagaaatagatggtgggtcctactactaagtggattccaccatcattaattatattttactttt 38079803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 321
Target Start/End: Complemental strand, 13493387 - 13493276
Alignment:
Q  211 aggatcctcttcatttgataaaataaatggaagtacacaatttggagagaga--tagacacataaaatagataatgggtcctaccattaagtgggtccca 308  Q
    ||||||||||  |||||| |||||||||||| |||  |||||| ||||||||  ||||||| ||||||||||| ||| ||| |||| |||||| |||||     
T  13493387 aggatcctctctatttgacaaaataaatgga-gtatgcaatttagagagagagatagacacgtaaaatagatagtggatcccaccactaagtgagtccct 13493289  T
Q  309 ctatcattaatta 321  Q
     ||||||||||||    
T  13493288 ttatcattaatta 13493276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 276
Target Start/End: Original strand, 33841766 - 33841830
Alignment:
Q  211 aggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaat 276  Q
    |||||||||| |||||| |||| |||||||| ||| |||||||||||||||||||||||| |||||    
T  33841766 aggatcctctccatttgttaaagtaaatgga-gtatacaatttggagagagatagacacaaaaaat 33841830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 333
Target Start/End: Original strand, 37337091 - 37337174
Alignment:
Q  250 atttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    |||| |||| ||||||| ||||||||||| || |||||  | ||||||||  |||||||| ||||||||||||||||| |||||    
T  37337091 atttagagaaagatagagacataaaataggtagtgggttatgccattaaggaggtcccaccatcattaattattttttgctttt 37337174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 283 - 333
Target Start/End: Original strand, 48084558 - 48084608
Alignment:
Q  283 tgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    ||||| ||| || |||||||||||||| |||||||||||||||||||||||    
T  48084558 tgggttctagcactaagtgggtcccaccatcattaattattttttactttt 48084608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 207 - 333
Target Start/End: Complemental strand, 4404409 - 4404282
Alignment:
Q  207 ggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaata--gataatgggtcctaccattaagtgggt 304  Q
    ||||| |||||||| |||||   |||||||||||||| |   |||||||||| ||||||||| | |||| |  | || ||||||||| ||||||||| ||    
T  4404409 ggttaagatcctctccatttataaaaataaatggaag-atgtaatttggagaaagatagacaaaaaaaaaaaggttagtgggtcctatcattaagtgtgt 4404311  T
Q  305 cccactatcattaattattttttactttt 333  Q
    | ||| ||||||||||| |||||||||||    
T  4404310 ctcaccatcattaattaatttttactttt 4404282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 282 - 333
Target Start/End: Complemental strand, 3326560 - 3326509
Alignment:
Q  282 atgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    ||||||| ||||||||| ||||| |||| || ||||||||||||||||||||    
T  3326560 atgggtcataccattaaatgggttccaccattattaattattttttactttt 3326509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 256 - 326
Target Start/End: Complemental strand, 34927555 - 34927484
Alignment:
Q  256 agagagatagacacataa-aatagataatgggtcctaccattaagtgggtcccactatcattaattattttt 326  Q
    ||||||||||||||| || |||||||  ||||||||||||||||||  ||| ||  ||||||||||||||||    
T  34927555 agagagatagacacaaaagaatagatggtgggtcctaccattaagtatgtctcatcatcattaattattttt 34927484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 333
Target Start/End: Complemental strand, 5361469 - 5361435
Alignment:
Q  299 gtgggtcccactatcattaattattttttactttt 333  Q
    ||||||||||| |||||||||||||||||||||||    
T  5361469 gtgggtcccaccatcattaattattttttactttt 5361435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 333
Target Start/End: Complemental strand, 47834607 - 47834573
Alignment:
Q  299 gtgggtcccactatcattaattattttttactttt 333  Q
    ||||||||||| |||||||||||||||||||||||    
T  47834607 gtgggtcccaccatcattaattattttttactttt 47834573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 284
Target Start/End: Complemental strand, 5818013 - 5817976
Alignment:
Q  247 acaatttggagagagatagacacataaaatagataatg 284  Q
    |||||||||||||||||||||||| |||| ||||||||    
T  5818013 acaatttggagagagatagacacaaaaaagagataatg 5817976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 304
Target Start/End: Original strand, 36003216 - 36003300
Alignment:
Q  219 cttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggt 304  Q
    |||||||||  |||||||||| |||||  ||||||||||||||||| | ||| |||||| ||| |||||| |  ||||||||||||    
T  36003216 cttcatttgtcaaaataaatg-aagtatgcaatttggagagagataaatacaaaaaataaatattgggtcatgtcattaagtgggt 36003300  T

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Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 327
Target Start/End: Complemental strand, 17080855 - 17080811
Alignment:
Q  283 tgggtcctaccattaagtgggtcccactatcattaattatttttt 327  Q
    |||||||||||||| |||| ||| ||| |||||||||||||||||    
T  17080855 tgggtcctaccattgagtgagtctcaccatcattaattatttttt 17080811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 327
Target Start/End: Complemental strand, 52552804 - 52552772
Alignment:
Q  295 ttaagtgggtcccactatcattaattatttttt 327  Q
    |||||||| ||||||||||||||||||||||||    
T  52552804 ttaagtggatcccactatcattaattatttttt 52552772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 1e-25; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 213 - 328
Target Start/End: Complemental strand, 4888579 - 4888464
Alignment:
Q  213 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 312  Q
    |||||||| ||||||| ||||||||||||  |   ||| ||||||||||||||||||| |||||||||| |||||||||||| ||||| |||||||| ||    
T  4888579 gatcctctccatttgacaaaataaatggagatttgcaagttggagagagatagacacaaaaaatagatagtgggtcctaccactaagtaggtcccaccat 4888480  T
Q  313 cattaattatttttta 328  Q
    |||||||||| |||||    
T  4888479 cattaattatatttta 4888464  T

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Target: chr7; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 248 - 333
Target Start/End: Original strand, 47799898 - 47799983
Alignment:
Q  248 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    ||||||||||||||||||||||| ||||||  | |||||||||| || |||||||||||||| |||||||||||||||||||||||    
T  47799898 caatttggagagagatagacacaaaaaataagtgatgggtcctatcactaagtgggtcccaccatcattaattattttttactttt 47799983  T

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Target: chr7; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 208 - 327
Target Start/End: Original strand, 40023215 - 40023333
Alignment:
Q  208 gttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtccc 307  Q
    ||||| |||||||  |||||| ||||||||  || ||| |||||||||||| ||||||||| ||||||||| |||||| || ||||||||||||||||||    
T  40023215 gttagaatcctctctatttgaaaaaataaaacga-gtatacaatttggagaaagatagacatataaaatagttaatggatcttaccattaagtgggtccc 40023313  T
Q  308 actatcattaattatttttt 327  Q
    || | |||||||||||||||    
T  40023314 accaccattaattatttttt 40023333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 252 - 333
Target Start/End: Complemental strand, 12139400 - 12139318
Alignment:
Q  252 ttggagagagatagacacataaaatagataatgggtcctaccattaagt-gggtcccactatcattaattattttttactttt 333  Q
    ||||||||||||||||||| |||||||||  |||||||||||||||||| ||||||||| |||||||||||| ||||||||||    
T  12139400 ttggagagagatagacacaaaaaatagatggtgggtcctaccattaagtggggtcccaccatcattaattatattttactttt 12139318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 252 - 333
Target Start/End: Original strand, 25084730 - 25084811
Alignment:
Q  252 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    ||||||||||||||||||| |||||||||  |||||||||||| |||||||||||||| |||||||||||| ||||| ||||    
T  25084730 ttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattatattttattttt 25084811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 205 - 333
Target Start/End: Complemental strand, 33450627 - 33450498
Alignment:
Q  205 ggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataa-aatagataatgggtcctaccattaagtggg 303  Q
    ||||||| |||||||| |||||| |||||||||| ||  |   ||||||||||||||||||||||| || |||||||  ||||||| |||| ||||||||    
T  33450627 ggggttaagatcctctccatttgctaaaataaattgagttttgcaatttggagagagatagacacaaaagaatagatggtgggtccaaccactaagtggg 33450528  T
Q  304 tcccactatcattaattattttttactttt 333  Q
    |||||  |||||||||||||||||| ||||    
T  33450527 tcccatcatcattaattattttttattttt 33450498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 206 - 295
Target Start/End: Complemental strand, 47270668 - 47270580
Alignment:
Q  206 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccat 295  Q
    |||||||||||||||  |||||||||||||||||||| |||||||||| |||| |||||||||||| ||||||||||| || ||||||||    
T  47270668 gggttaggatcctctctatttgataaaataaatggaattacacaatttagagatagatagacacat-aaatagataataggccctaccat 47270580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 213 - 333
Target Start/End: Original strand, 9559017 - 9559137
Alignment:
Q  213 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 312  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||| ||| |||||||||  |||||||||||| |||||||||||||| ||    
T  9559017 gatcctctccatttggcaaaataaatggagatttgcaagttggagagagatagatacaaaaaatagatggtgggtcctaccactaagtgggtcccaccat 9559116  T
Q  313 cattaattattttttactttt 333  Q
    |||||||||| ||||| ||||    
T  9559117 cattaattatattttattttt 9559137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 206 - 333
Target Start/End: Original strand, 39855770 - 39855896
Alignment:
Q  206 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtc 305  Q
    |||||| ||| |||||||||||| ||| |||||||| ||    ||||||||||||||||||||||||||| ||||  | |||||||||| ||||||||||    
T  39855770 gggttaagattctcttcatttgacaaattaaatgga-gtttgtaatttggagagagatagacacataaaaaagatggtcggtcctaccactaagtgggtc 39855868  T
Q  306 ccactatcattaattattttttactttt 333  Q
    |||  |||||||||||  ||||||||||    
T  39855869 ccatcatcattaattaaattttactttt 39855896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 217 - 333
Target Start/End: Complemental strand, 7362676 - 7362560
Alignment:
Q  217 ctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatt 316  Q
    |||| ||||||| ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  |||||| ||||| ||| ||||| |||| ||||||    
T  7362676 ctctccatttgacaaaataaatggagttttgcaaattggagagagatagacacaaaaaatagatggtgggtcgtaccactaaatgggttccaccatcatt 7362577  T
Q  317 aattattttttactttt 333  Q
    |||||| ||||||||||    
T  7362576 aattatattttactttt 7362560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 213 - 333
Target Start/End: Original strand, 7712331 - 7712450
Alignment:
Q  213 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 312  Q
    |||||||| |||||   |||||||||||||| |  |||||| |||||||||||| |||||| ||||||| || ||||||||||||||||||| |||| ||    
T  7712331 gatcctctccatttataaaaataaatggaag-atgcaatttagagagagatagagacataagatagatagtgagtcctaccattaagtgggtgccaccat 7712429  T
Q  313 cattaattattttttactttt 333  Q
    | ||||||| |||||| ||||    
T  7712430 ctttaattactttttattttt 7712450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 213 - 333
Target Start/End: Complemental strand, 16366630 - 16366510
Alignment:
Q  213 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 312  Q
    |||||||| ||||||| ||||||||||||  |   ||| ||||||||||||||||| |  ||||||||  ||| |||||||| |||||| ||||||| ||    
T  16366630 gatcctctccatttgacaaaataaatggagttttgcaagttggagagagatagacataagaaatagatggtggatcctaccactaagtgtgtcccaccat 16366531  T
Q  313 cattaattattttttactttt 333  Q
    |||||||||| ||||||||||    
T  16366530 cattaattatattttactttt 16366510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 213 - 333
Target Start/End: Complemental strand, 21151264 - 21151144
Alignment:
Q  213 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 312  Q
    |||||||| ||||||  ||||||||||||  |   ||| |||||||||||||||||||  ||||||||   || |||||||| |||||||||||||| ||    
T  21151264 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaagaaatagatggaggatcctaccactaagtgggtcccaccat 21151165  T
Q  313 cattaattattttttactttt 333  Q
    |||||||||| ||||||||||    
T  21151164 cattaattatattttactttt 21151144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 214 - 325
Target Start/End: Complemental strand, 989239 - 989129
Alignment:
Q  214 atcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatc 313  Q
    ||||||| ||||||| ||| |||||||| ||   ||||||||||||||||||||||| |||||| ||| |||||||||||| ||||| ||||| || ||     
T  989239 atcctctccatttgacaaattaaatgga-gtttgcaatttggagagagatagacacaaaaaatatatagtgggtcctaccactaagtaggtccaaccata 989141  T
Q  314 attaattatttt 325  Q
    ||||||||||||    
T  989140 attaattatttt 989129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 248 - 327
Target Start/End: Complemental strand, 32916033 - 32915954
Alignment:
Q  248 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattatttttt 327  Q
    ||||||| ||||||||||||||| |||||| ||| ||||||||||||||||||| ||||||| ||||| |||||| ||||    
T  32916033 caatttgaagagagatagacacaaaaaataaatagtgggtcctaccattaagtgagtcccaccatcatgaattatatttt 32915954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 204 - 333
Target Start/End: Original strand, 47500236 - 47500366
Alignment:
Q  204 aggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataa-aatagataatgggtcctaccattaagtgg 302  Q
    |||||||| |||||||| |||||  |||||||||| ||  |    |||||||||||||||||||||| || |||||||  ||||||| |||| |||||||    
T  47500236 aggggttaagatcctctccatttactaaaataaattgagttttgtaatttggagagagatagacacaaaagaatagatggtgggtccaaccactaagtgg 47500335  T
Q  303 gtcccactatcattaattattttttactttt 333  Q
    ||||||  |||||||||||||||||| ||||    
T  47500336 gtcccatcatcattaattattttttattttt 47500366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 248 - 329
Target Start/End: Complemental strand, 8149686 - 8149605
Alignment:
Q  248 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttac 329  Q
    ||||||| ||||||||||| || |||||||  || |||||| || ||||||||||||||||| |||||||||||||||||||    
T  8149686 caatttgaagagagatagagacgtaaaataagtagtgggtcatatcattaagtgggtcccaccatcattaattattttttac 8149605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 248 - 333
Target Start/End: Complemental strand, 30588612 - 30588527
Alignment:
Q  248 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    ||||||||  ||||||||||||| ||||||  | | |||||||| || |||||||||||||| |||||||||||||||||||||||    
T  30588612 caatttgggaagagatagacacaaaaaataagtgacgggtcctatcactaagtgggtcccaccatcattaattattttttactttt 30588527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 252 - 333
Target Start/End: Original strand, 45260429 - 45260510
Alignment:
Q  252 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    ||||||||||||||||||| |||||||||  ||| |||||||| ||||||| |||||  |||||||||||| ||||||||||    
T  45260429 ttggagagagatagacacaaaaaatagattgtggatcctaccactaagtggatcccatcatcattaattatattttactttt 45260510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 214 - 333
Target Start/End: Complemental strand, 29631156 - 29631040
Alignment:
Q  214 atcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatc 313  Q
    ||||||| |||||| |||||||||||| |||   |||||||   ||||||||||||| || ||||||| ||||||| |||| || || ||||||||||||    
T  29631156 atcctctccatttggtaaaataaatgg-agtttgcaatttg--aagagatagacacaaaacatagatagtgggtccaaccactatgtaggtcccactatc 29631060  T
Q  314 attaattattttttactttt 333  Q
    |||||||||| |||||||||    
T  29631059 attaattattctttactttt 29631040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 244 - 300
Target Start/End: Complemental strand, 29844372 - 29844316
Alignment:
Q  244 tacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagt 300  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||    
T  29844372 tacacaatttggagagagatagacacataaaatagatagtgggttctaccactaagt 29844316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 206 - 325
Target Start/End: Complemental strand, 7373985 - 7373867
Alignment:
Q  206 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtc 305  Q
    |||||| |||||||||| || | |||||||||||| | ||  ||||||||||||||||||  ||| |||||||| | |||||| ||| ||||||| | ||    
T  7373985 gggttaagatcctcttcgttggttaaaataaatggga-tatgcaatttggagagagataggtacaaaaaatagacagtgggtcttactattaagtagatc 7373887  T
Q  306 ccactatcattaattatttt 325  Q
    ||||||||||||||| ||||    
T  7373886 ccactatcattaattttttt 7373867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 250 - 333
Target Start/End: Complemental strand, 24193668 - 24193585
Alignment:
Q  250 atttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    ||||| |||||||||||||||||||||||| |||| ||| ||||||||| ||| |||||  |||| |||||| |||||| ||||    
T  24193668 atttgaagagagatagacacataaaatagacaatgagtcttaccattaaatggatcccatcatcagtaattactttttaatttt 24193585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 333
Target Start/End: Complemental strand, 38365761 - 38365647
Alignment:
Q  218 tcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 317  Q
    |||||||||  ||||||||||| || |||  |||||| || |||||||| ||| ||||| ||||||||||| ||| ||||| ||| | | ||||||||||    
T  38365761 tcttcattttttaaaataaatgtaa-tacgtaatttgaagtgagatagatacaaaaaattgataatgggtcttactattaaatggattctactatcatta 38365663  T
Q  318 attattttttactttt 333  Q
    |||||||| |||||||    
T  38365662 attattttatactttt 38365647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 329
Target Start/End: Complemental strand, 44648076 - 44647958
Alignment:
Q  213 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtggg--tcccact 310  Q
    |||||||| ||||||| ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  ||| ||| |||| ||||||||  |||| |     
T  44648076 gatcctctccatttgacaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggatccgaccactaagtgggtctccctcc 44647977  T
Q  311 atcattaattattttttac 329  Q
    |||||||||||| ||||||    
T  44647976 atcattaattatattttac 44647958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 333
Target Start/End: Complemental strand, 18198377 - 18198248
Alignment:
Q  204 aggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtggg 303  Q
    |||||| | |||||||| ||||||  ||||||||||||  |   ||| ||||||| | ||||||||| |||||||||  ||||| || ||| |||||| |    
T  18198377 aggggtgaagatcctctccatttggcaaaataaatggagttttgcaaattggagataaatagacacaaaaaatagatggtgggttctgccactaagtgag 18198278  T
Q  304 tcccactatcattaattattttttactttt 333  Q
    |||||| |||||||||||| ||||| ||||    
T  18198277 tcccaccatcattaattatattttattttt 18198248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 248 - 333
Target Start/End: Original strand, 19889032 - 19889117
Alignment:
Q  248 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    |||||| || ||||||||| ||| ||||||  |  ||||||||| || ||||||||| |||| |||||||||||||||||||||||    
T  19889032 caatttagaaagagatagatacaaaaaataagttgtgggtcctatcactaagtgggttccaccatcattaattattttttactttt 19889117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 333
Target Start/End: Original strand, 47226039 - 47226157
Alignment:
Q  213 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 312  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||| ||||| ||||||  |  ||||||| |||| ||| |||||||||| ||    
T  47226039 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagataaacacaaaaaata--tggtgggtcccaccactaaatgggtcccaccat 47226136  T
Q  313 cattaattattttttactttt 333  Q
    |||||||||| ||||||||||    
T  47226137 cattaattatattttactttt 47226157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 286 - 333
Target Start/End: Original strand, 11828945 - 11828992
Alignment:
Q  286 gtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    ||||||||||||||||||| |||| |||||||||||||||||| ||||    
T  11828945 gtcctaccattaagtgggttccaccatcattaattattttttattttt 11828992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 325
Target Start/End: Original strand, 46802331 - 46802406
Alignment:
Q  250 atttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattatttt 325  Q
    |||| |||||||||||||| | ||||||||   |||||||||||| |||||||||||||| | | |||||||||||    
T  46802331 atttagagagagatagacataaaaaatagacggtgggtcctaccactaagtgggtcccaccaccgttaattatttt 46802406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 333
Target Start/End: Original strand, 34985943 - 34986029
Alignment:
Q  248 caatttggagagagatagacacataa-aatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    ||||||||||||||||||||||| || |||||||  ||||||  |||| ||| || ||||||  |||||||||||||||||| ||||    
T  34985943 caatttggagagagatagacacaaaagaatagatggtgggtcaaaccactaaatgagtcccatcatcattaattattttttattttt 34986029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 281
Target Start/End: Original strand, 5463867 - 5463934
Alignment:
Q  213 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagata 281  Q
    |||||||| ||||||||| |||||||  | ||| |||||||||||||| ||| ||||||||||||||||    
T  5463867 gatcctctccatttgatataataaatata-gtatacaatttggagagatataaacacataaaatagata 5463934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 247 - 317
Target Start/End: Original strand, 19027680 - 19027751
Alignment:
Q  247 acaatttggagagagatagacac-ataaaatagataatgggtcctaccattaagtgggtcccactatcatta 317  Q
    ||||||||||||||||||||||| | |||||| ||  ||||||||| || ||||||| |||||| |||||||    
T  19027680 acaatttggagagagatagacacaaaaaaataaatggtgggtcctatcactaagtggatcccaccatcatta 19027751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 247 - 317
Target Start/End: Complemental strand, 20726956 - 20726885
Alignment:
Q  247 acaatttggagagagatagacac-ataaaatagataatgggtcctaccattaagtgggtcccactatcatta 317  Q
    ||||||||||||||||||||||| | |||||| ||  ||||||||| || ||||||| |||||| |||||||    
T  20726956 acaatttggagagagatagacacaaaaaaataaatggtgggtcctatcactaagtggatcccaccatcatta 20726885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 325
Target Start/End: Original strand, 30153144 - 30153257
Alignment:
Q  211 aggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccact 310  Q
    |||||||||| ||||| | |||| |||||||| ||  ||||||| |||||||||||| |||| ||| ||||||| |  ||| || |||||| || | ||     
T  30153144 aggatcctctccatttaacaaaacaaatggaa-tatgcaatttgaagagagatagacgcatataattgataatgagctctagcactaagtgagtactacc 30153242  T
Q  311 atcattaattatttt 325  Q
    |||||||||||||||    
T  30153243 atcattaattatttt 30153257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 268
Target Start/End: Complemental strand, 44390900 - 44390835
Alignment:
Q  202 agaggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagaca 268  Q
    |||||||||| |||||||| |||||   |||||||||||||| |  |||||||||||||||||||||    
T  44390900 agaggggttaagatcctctccatttataaaaataaatggaag-atgcaatttggagagagatagaca 44390835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 292
Target Start/End: Complemental strand, 18064643 - 18064588
Alignment:
Q  235 aaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctac 292  Q
    |||||||| ||||||||| |||||||||||||||||||||||||| | || |||||||    
T  18064643 aaatggaa-tacacaatt-ggagagagatagacacataaaatagacagtgagtcctac 18064588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 213 - 333
Target Start/End: Complemental strand, 208175 - 208055
Alignment:
Q  213 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 312  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||| ||||| |||||||||  |||||||||||| |||||||||||||  ||    
T  208175 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagataaacacaaaaaatagatggtgggtcctaccactaagtgggtcccatcat 208076  T
Q  313 cattaattattttttactttt 333  Q
    |||||||||| ||||||||||    
T  208075 cattaattatattttactttt 208055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 230 - 328
Target Start/End: Complemental strand, 58774 - 58677
Alignment:
Q  230 aaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattatttttta 328  Q
    ||||||||||||| ||  ||||||||||||||||| ||| |||||||||||| ||| |||||||||||||||||| |||  ||||||||||| ||||||    
T  58774 aaaataaatggaa-tatgcaatttggagagagataaacatataaaatagatagtggatcctaccattaagtgggttccatcatcattaattacttttta 58677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 230 - 333
Target Start/End: Complemental strand, 70885 - 70783
Alignment:
Q  230 aaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttac 329  Q
    ||||||||||||| ||  ||||||||| ||||||| ||| |||||||||||| |   |||||||||||| ||||| |||| ||||||||||  |||||||    
T  70885 aaaataaatggaa-tatgcaatttggaaagagataaacatataaaatagatagtttatcctaccattaaatgggttccaccatcattaattcctttttac 70787  T
Q  330 tttt 333  Q
    ||||    
T  70786 tttt 70783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 252 - 333
Target Start/End: Complemental strand, 7220 - 7139
Alignment:
Q  252 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    ||||||||||||||||||| |||||||||  |||||||||| ||||||||||| |||| |||||||||||| ||||| ||||    
T  7220 ttggagagagatagacacaaaaaatagatggtgggtcctactattaagtgggttccaccatcattaattatattttattttt 7139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 248 - 333
Target Start/End: Original strand, 29567 - 29652
Alignment:
Q  248 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    |||||| |||||||||||| ||||||||||| |||| ||||||| ||||| ||| |||||||||||||||||||  ||||||||||    
T  29567 caatttagagagagatagagacataaaataggtaataggtcctagcattacgtgagtcccactatcattaattacattttactttt 29652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 255 - 333
Target Start/End: Original strand, 17311 - 17389
Alignment:
Q  255 gagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    |||||||||||||||| ||||||  |  ||||||||| || |||||||||||||| |||||||||||||||||||||||    
T  17311 gagagagatagacacaaaaaataagtgctgggtcctatcactaagtgggtcccaccatcattaattattttttactttt 17389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 252 - 333
Target Start/End: Original strand, 16399 - 16480
Alignment:
Q  252 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    ||||||||||||||||||| |||||| ||  |||||||||||| |||||||||||||  |||||||||||| ||||| ||||    
T  16399 ttggagagagatagacacaaaaaataaatggtgggtcctaccactaagtgggtcccatcatcattaattatattttattttt 16480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 258 - 333
Target Start/End: Original strand, 22450 - 22525
Alignment:
Q  258 agagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    ||||||||||||| |||||||||| ||| |||||||| |||||| || |||| || ||||||||| ||||||||||    
T  22450 agagatagacacaaaaaatagatagtggatcctaccactaagtgagttccacaataattaattatattttactttt 22525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 252 - 322
Target Start/End: Original strand, 9203 - 9273
Alignment:
Q  252 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattat 322  Q
    ||||||||||||||||||| |||||||||  ||||||| |||| ||||||| | |||| ||||||||||||    
T  9203 ttggagagagatagacacagaaaatagatggtgggtccaaccactaagtggattccaccatcattaattat 9273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 252 - 333
Target Start/End: Original strand, 6437 - 6518
Alignment:
Q  252 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 333  Q
    ||||| ||||| ||||||| |||||||||  |||||||||| | ||| ||||| | || |||||||||||| ||||||||||    
T  6437 ttggaaagagacagacacaaaaaatagatggtgggtcctacaactaaatgggtacaaccatcattaattatattttactttt 6518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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