View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15305_low_1 (Length: 496)

Name: NF15305_low_1
Description: NF15305
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15305_low_1
NF15305_low_1
[»] chr3 (53 HSPs)
chr3 (115-480)||(2820153-2820518)
chr3 (116-479)||(2760808-2761171)
chr3 (116-471)||(2808869-2809224)
chr3 (139-471)||(2854017-2854349)
chr3 (1-114)||(6303530-6303642)
chr3 (1-114)||(10099924-10100036)
chr3 (1-114)||(10093923-10094035)
chr3 (1-114)||(10200805-10200917)
chr3 (10-114)||(10897232-10897336)
chr3 (139-479)||(2836807-2837147)
chr3 (10-114)||(22625829-22625933)
chr3 (16-114)||(10594883-10594981)
chr3 (11-115)||(27544517-27544620)
chr3 (1-114)||(54193445-54193557)
chr3 (139-479)||(2750589-2750929)
chr3 (11-114)||(29897527-29897631)
chr3 (11-114)||(11079743-11079845)
chr3 (17-114)||(5858777-5858874)
chr3 (16-114)||(10612627-10612725)
chr3 (9-114)||(4535841-4535946)
chr3 (10-114)||(20031170-20031275)
chr3 (10-114)||(54188737-54188841)
chr3 (11-114)||(29913805-29913908)
chr3 (145-479)||(2791908-2792242)
chr3 (11-114)||(3330117-3330221)
chr3 (139-479)||(5414479-5414819)
chr3 (11-114)||(27761840-27761943)
chr3 (145-470)||(2770663-2770988)
chr3 (10-116)||(48390150-48390258)
chr3 (10-114)||(10949115-10949218)
chr3 (11-114)||(47882738-47882840)
chr3 (11-108)||(47878033-47878128)
chr3 (10-81)||(16462424-16462495)
chr3 (146-471)||(2798963-2799288)
chr3 (21-114)||(38003103-38003195)
chr3 (31-102)||(7418306-7418378)
chr3 (11-113)||(13893686-13893789)
chr3 (55-114)||(16997150-16997209)
chr3 (55-112)||(1620313-1620370)
chr3 (61-114)||(36871149-36871202)
chr3 (61-116)||(24980073-24980128)
chr3 (61-107)||(53468302-53468349)
chr3 (54-114)||(14634291-14634350)
chr3 (61-114)||(51674608-51674662)
chr3 (61-114)||(747125-747177)
chr3 (61-114)||(10621366-10621418)
chr3 (61-114)||(25389273-25389326)
chr3 (61-114)||(28412870-28412922)
chr3 (61-114)||(31151702-31151754)
chr3 (61-114)||(38210737-38210789)
chr3 (61-114)||(50494365-50494417)
chr3 (61-117)||(9604444-9604499)
chr3 (71-114)||(39715839-39715883)
[»] chr2 (26 HSPs)
chr2 (1-114)||(33670817-33670930)
chr2 (1-115)||(39687207-39687322)
chr2 (1-114)||(39680263-39680377)
chr2 (10-112)||(12781075-12781177)
chr2 (1-114)||(45679941-45680054)
chr2 (10-115)||(27517490-27517594)
chr2 (1-114)||(2736423-2736536)
chr2 (1-114)||(17943751-17943867)
chr2 (10-114)||(22712374-22712477)
chr2 (10-114)||(22717083-22717186)
chr2 (11-114)||(17462664-17462767)
chr2 (16-114)||(20054610-20054710)
chr2 (11-114)||(37170607-37170710)
chr2 (1-102)||(2741159-2741260)
chr2 (16-115)||(20049865-20049966)
chr2 (9-114)||(38191241-38191345)
chr2 (10-112)||(30479221-30479322)
chr2 (61-116)||(19007997-19008053)
chr2 (59-114)||(28458693-28458751)
chr2 (60-114)||(7462789-7462844)
chr2 (61-115)||(17849474-17849529)
chr2 (61-114)||(22287181-22287234)
chr2 (61-114)||(42923293-42923346)
chr2 (61-114)||(42923351-42923404)
chr2 (61-114)||(36558721-36558773)
chr2 (61-114)||(36560981-36561033)
[»] chr6 (35 HSPs)
chr6 (1-115)||(31248543-31248656)
chr6 (11-114)||(3577338-3577441)
chr6 (9-115)||(25465753-25465859)
chr6 (10-114)||(25941896-25942000)
chr6 (1-114)||(13878957-13879070)
chr6 (1-114)||(13883693-13883806)
chr6 (1-114)||(35201157-35201268)
chr6 (16-114)||(17694701-17694799)
chr6 (10-114)||(16786161-16786264)
chr6 (11-114)||(26887077-26887180)
chr6 (1-114)||(30987356-30987467)
chr6 (1-97)||(17038455-17038550)
chr6 (11-114)||(33216055-33216159)
chr6 (11-102)||(12166010-12166102)
chr6 (11-114)||(13467318-13467422)
chr6 (16-114)||(22351704-22351801)
chr6 (11-114)||(19701757-19701860)
chr6 (18-114)||(22342652-22342747)
chr6 (36-110)||(5165697-5165772)
chr6 (11-96)||(26643399-26643483)
chr6 (11-96)||(26749365-26749449)
chr6 (10-117)||(17066075-17066184)
chr6 (61-114)||(10584359-10584413)
chr6 (36-69)||(5165772-5165805)
chr6 (61-114)||(5273055-5273108)
chr6 (60-114)||(3629711-3629765)
chr6 (61-114)||(26065403-26065457)
chr6 (61-114)||(26085372-26085426)
chr6 (61-115)||(29754548-29754601)
chr6 (61-114)||(8717195-8717247)
chr6 (61-114)||(11982872-11982924)
chr6 (61-114)||(12195354-12195406)
chr6 (61-114)||(26065961-26066013)
chr6 (61-114)||(26068235-26068287)
chr6 (60-114)||(28037576-28037631)
[»] scaffold1050 (1 HSPs)
scaffold1050 (1-114)||(2919-3031)
[»] scaffold0131 (1 HSPs)
scaffold0131 (1-114)||(17712-17824)
[»] chr8 (24 HSPs)
chr8 (1-114)||(25684859-25684972)
chr8 (1-111)||(4812336-4812445)
chr8 (1-114)||(16752374-16752487)
chr8 (1-114)||(16757110-16757223)
chr8 (1-114)||(28328126-28328239)
chr8 (1-114)||(28332849-28332962)
chr8 (1-114)||(28895721-28895832)
chr8 (10-114)||(28890992-28891095)
chr8 (11-114)||(3276523-3276626)
chr8 (11-114)||(9020957-9021060)
chr8 (11-114)||(23179410-23179512)
chr8 (17-114)||(591029-591126)
chr8 (11-114)||(17799278-17799381)
chr8 (15-114)||(29554705-29554803)
chr8 (16-96)||(21034100-21034181)
chr8 (11-115)||(26268083-26268188)
chr8 (42-114)||(4823551-4823622)
chr8 (11-102)||(33032879-33032971)
chr8 (10-114)||(30423438-30423541)
chr8 (10-114)||(2266936-2267039)
chr8 (61-114)||(3874435-3874487)
chr8 (61-114)||(28251410-28251463)
chr8 (61-114)||(183257-183310)
chr8 (61-115)||(24873038-24873091)
[»] chr7 (32 HSPs)
chr7 (1-114)||(25405633-25405745)
chr7 (11-114)||(25351580-25351683)
chr7 (1-114)||(7070014-7070126)
chr7 (9-114)||(7464365-7464470)
chr7 (1-114)||(3319869-3319982)
chr7 (1-114)||(7075015-7075127)
chr7 (10-114)||(30247198-30247303)
chr7 (10-114)||(3324637-3324742)
chr7 (10-114)||(15540844-15540949)
chr7 (11-114)||(8378357-8378459)
chr7 (10-114)||(2075333-2075436)
chr7 (11-114)||(44143722-44143824)
chr7 (10-112)||(34546734-34546835)
chr7 (11-114)||(44016514-44016618)
chr7 (11-114)||(25357274-25357378)
chr7 (11-114)||(2121128-2121229)
chr7 (11-117)||(25410361-25410468)
chr7 (11-114)||(44010603-44010707)
chr7 (11-114)||(42006888-42006992)
chr7 (31-112)||(21369888-21369970)
chr7 (55-114)||(44512363-44512423)
chr7 (61-114)||(24748981-24749035)
chr7 (61-114)||(443989-444044)
chr7 (55-114)||(6067048-6067107)
chr7 (64-114)||(7349117-7349167)
chr7 (64-114)||(7351491-7351541)
chr7 (61-114)||(31434892-31434946)
chr7 (61-114)||(1606775-1606827)
chr7 (61-114)||(18345937-18345989)
chr7 (61-114)||(20297758-20297810)
chr7 (61-114)||(25542924-25542976)
chr7 (61-114)||(38394382-38394434)
[»] chr4 (38 HSPs)
chr4 (1-114)||(15831366-15831478)
chr4 (10-114)||(18587194-18587298)
chr4 (11-114)||(15312545-15312649)
chr4 (11-114)||(16688794-16688897)
chr4 (16-114)||(8529502-8529600)
chr4 (1-114)||(11853784-11853897)
chr4 (16-114)||(16489583-16489681)
chr4 (1-114)||(55822478-55822591)
chr4 (12-114)||(4885100-4885202)
chr4 (10-114)||(4558534-4558639)
chr4 (11-115)||(15317186-15317291)
chr4 (13-114)||(4570320-4570420)
chr4 (11-114)||(4555915-4556017)
chr4 (11-114)||(7050125-7050227)
chr4 (11-114)||(47566717-47566821)
chr4 (11-114)||(36771621-36771725)
chr4 (11-109)||(36769704-36769803)
chr4 (59-114)||(31300677-31300732)
chr4 (9-114)||(16639050-16639154)
chr4 (26-114)||(16631425-16631511)
chr4 (10-114)||(25613810-25613915)
chr4 (61-115)||(40637513-40637567)
chr4 (61-114)||(47563194-47563248)
chr4 (61-114)||(18709003-18709056)
chr4 (11-44)||(31300648-31300681)
chr4 (55-114)||(16185686-16185746)
chr4 (61-119)||(16455661-16455719)
chr4 (61-118)||(2484711-2484766)
chr4 (61-114)||(18311215-18311269)
chr4 (61-114)||(18409192-18409246)
chr4 (61-117)||(17662089-17662143)
chr4 (71-115)||(24879427-24879472)
chr4 (71-115)||(24880891-24880936)
chr4 (64-112)||(25358073-25358122)
chr4 (61-114)||(51015685-51015738)
chr4 (61-115)||(3824446-3824502)
chr4 (38-114)||(4874336-4874410)
chr4 (55-114)||(47078702-47078762)
[»] chr1 (24 HSPs)
chr1 (1-114)||(9521944-9522056)
chr1 (10-115)||(2232821-2232927)
chr1 (11-114)||(21353197-21353301)
chr1 (1-114)||(2393133-2393247)
chr1 (11-114)||(9526693-9526796)
chr1 (10-114)||(25134295-25134399)
chr1 (139-459)||(11115968-11116276)
chr1 (11-108)||(4144543-4144641)
chr1 (12-114)||(2401074-2401175)
chr1 (33-114)||(3090960-3091039)
chr1 (72-119)||(2510179-2510226)
chr1 (61-114)||(13215465-13215518)
chr1 (61-114)||(25860252-25860306)
chr1 (61-115)||(9459276-9459329)
chr1 (61-115)||(9463103-9463156)
chr1 (64-114)||(13762225-13762275)
chr1 (56-114)||(13785107-13785164)
chr1 (61-115)||(16231950-16232003)
chr1 (61-114)||(28206912-28206965)
chr1 (61-114)||(50078635-50078689)
chr1 (61-114)||(16226555-16226607)
chr1 (61-114)||(23786226-23786278)
chr1 (61-117)||(39932461-39932517)
chr1 (61-115)||(27336781-27336837)
[»] scaffold0691 (1 HSPs)
scaffold0691 (139-479)||(4356-4696)
[»] scaffold0006 (1 HSPs)
scaffold0006 (1-115)||(231334-231446)
[»] chr5 (22 HSPs)
chr5 (10-114)||(42238484-42238588)
chr5 (11-114)||(35385303-35385406)
chr5 (16-114)||(1240662-1240760)
chr5 (10-112)||(28786626-28786728)
chr5 (10-114)||(22673060-22673163)
chr5 (11-114)||(1171039-1171142)
chr5 (11-114)||(2297849-2297951)
chr5 (11-114)||(40222993-40223097)
chr5 (1-92)||(25452711-25452802)
chr5 (10-92)||(25445720-25445803)
chr5 (11-114)||(11962287-11962390)
chr5 (11-114)||(20437145-20437249)
chr5 (11-114)||(16093144-16093249)
chr5 (10-108)||(17841110-17841207)
chr5 (31-114)||(10627611-10627695)
chr5 (61-114)||(37705626-37705680)
chr5 (61-110)||(17818338-17818388)
chr5 (285-367)||(31681620-31681702)
chr5 (61-114)||(10528937-10528990)
chr5 (67-114)||(15552638-15552685)
chr5 (10-114)||(31782311-31782413)
chr5 (61-114)||(3372977-3373029)
[»] scaffold0256 (1 HSPs)
scaffold0256 (1-114)||(16546-16656)
[»] scaffold0209 (1 HSPs)
scaffold0209 (34-114)||(16885-16965)
[»] scaffold0267 (1 HSPs)
scaffold0267 (61-114)||(421-473)
[»] scaffold0472 (1 HSPs)
scaffold0472 (61-114)||(6594-6646)


Alignment Details
Target: chr3 (Bit Score: 270; Significance: 1e-150; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 270; E-Value: 1e-150
Query Start/End: Original strand, 115 - 480
Target Start/End: Complemental strand, 2820518 - 2820153
Alignment:
Q  115 gtaggcattgtcccatagaccaaacttcagcagatttggcaagttcttcagtgattgcagtggatcatttttcaacttagataaggccagctttatctca 214  Q
    |||||||| |||||||||||||||||||||||| || |||||||| ||||| |||||||||||||||||||||||||||||||| |||||||| |||||     
T  2820518 gtaggcatcgtcccatagaccaaacttcagcaggttcggcaagtttttcagagattgcagtggatcatttttcaacttagataaagccagcttgatctcc 2820419  T
Q  215 acaagatactccagttttggaatccaatcaggcaatgtatctaatctagctttcaattgaagccgctgaagttggggtggagttgagacaaaattcaagt 314  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||  |||||||||||||||||    
T  2820418 acaagagactcaagttttggaatccaatcaggcaatgtatctaatctggctttcaaatgaagccgctgaagttggtgtggatatgagacaaaattcaagt 2820319  T
Q  315 taatggtttcatcctcaccaattgtagtgatattaagatcttcaaggtgtttcaattctactacaacaacacttaaggcatctccatgttttcttcttac 414  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| |||| ||||||||||||| ||||||| |||||||||    
T  2820318 taatggtttcatcctcaccaatggtagtgatattaagatcttcaaggtgtttcatttctactataacagcacttaaggcatccccatgttctcttcttac 2820219  T
Q  415 acgccttaaagctaacttccttaactgctttaacattttcatctcgttaatgagatcgactcccct 480  Q
    | |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  2820218 atgccttaaacctaacctccttaactgctttaacattttcatctcgttaatgagatcgactcccct 2820153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 116 - 479
Target Start/End: Complemental strand, 2761171 - 2760808
Alignment:
Q  116 taggcattgtcccatagaccaaacttcagcagatttggcaagttcttcagtgattgcagtggatcatttttcaacttagataaggccagctttatctcaa 215  Q
    ||||| |||||||||||||| ||||||| ||||||||||||||| || ||||| |||||||||||||||||||| | |||||| |||| |||||||||||    
T  2761171 taggcgttgtcccatagaccgaacttcaacagatttggcaagtttttaagtgactgcagtggatcatttttcaagtaagataaagccaactttatctcaa 2761072  T
Q  216 caagatactccagttttggaatccaatcaggcaatgtatctaatctagctttcaattgaagccgctgaagttggggtggagttgagacaaaattcaagtt 315  Q
    |||||||||| |||||||||||||| |||||||||||||||| | |||||||||| ||||||  |||||||||||| |||| ||||||||||||||||||    
T  2761071 caagatactcaagttttggaatccattcaggcaatgtatctagtttagctttcaaatgaagcgcctgaagttggggcggagatgagacaaaattcaagtt 2760972  T
Q  316 aatggtttcatcctcaccaattgtagtgatattaagatcttcaaggtgtttcaattctactacaacaacacttaaggcatctccatgttttcttcttaca 415  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| ||| || ||||| | ||||||||||    
T  2760971 aatgctttcatcctcaccaattgtagtgatattaagatcttcaaggtgtttcaattctactataacagcacttatggcctccccatgctctcttcttaca 2760872  T
Q  416 cgccttaaagctaacttccttaactgctttaacattttcatctcgttaatgagatcgactcccc 479  Q
     |||||||| ||||| | ||||||||  |||||||||||||||| | ||||||||| |||||||    
T  2760871 tgccttaaacctaaccttcttaactgacttaacattttcatctcttgaatgagatcaactcccc 2760808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 168; E-Value: 8e-90
Query Start/End: Original strand, 116 - 471
Target Start/End: Complemental strand, 2809224 - 2808869
Alignment:
Q  116 taggcattgtcccatagaccaaacttcagcagatttggcaagttcttcagtgattgcagtggatcatttttcaacttagataaggccagctttatctcaa 215  Q
    ||||| |||||||||||||| || |||| || || ||||||||| |||||||| || | ||||||||||||||||| |||||| ||||||||||||||||    
T  2809224 taggcgttgtcccatagaccgaatttcaacaaatatggcaagtttttcagtgactgtaatggatcatttttcaactgagataaagccagctttatctcaa 2809125  T
Q  216 caagatactccagttttggaatccaatcaggcaatgtatctaatctagctttcaattgaagccgctgaagttggggtggagttgagacaaaattcaagtt 315  Q
    ||||||||||||||||||| ||||| |||||||||| ||||| | |||||||||| ||||| ||  |||| ||||||||||  ||||| || ||||||||    
T  2809124 caagatactccagttttgggatccattcaggcaatgaatctagtttagctttcaaatgaagtcgtcgaagctggggtggagacgagacgaagttcaagtt 2809025  T
Q  316 aatggtttcatcctcaccaattgtagtgatattaagatcttcaaggtgtttcaattctactacaacaacacttaaggcatctccatgttttcttcttaca 415  Q
    ||| |||||||| ||||| ||||||||||||||||||| |||||||||||||| ||||||||   || ||| ||||||||  ||||||| |||||| |||    
T  2809024 aattgtttcatcttcacctattgtagtgatattaagattttcaaggtgtttcatttctactattgcagcacataaggcattcccatgttctcttctcaca 2808925  T
Q  416 cgccttaaagctaacttccttaactgctttaacattttcatctcgttaatgagatc 471  Q
     |||||||| ||||| |||||||||||  ||||||||||||||| | |||||||||    
T  2808924 tgccttaaacctaacctccttaactgccctaacattttcatctcttgaatgagatc 2808869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 139 - 471
Target Start/End: Original strand, 2854017 - 2854349
Alignment:
Q  139 cttcagcagatttggcaagttcttcagtgattgcagtggatcatttttcaacttagataaggccagctttatctcaacaagatactccagttttggaatc 238  Q
    |||||| | |||||||||||| || ||||| |||| |||||||| ||||| ||| ||||| |||||||||||||||||||||||||||| |||||| |||    
T  2854017 cttcagtaaatttggcaagttttttagtgactgcattggatcatctttcagcttggataaagccagctttatctcaacaagatactccaattttgggatc 2854116  T
Q  239 caatcaggcaatgtatctaatctagctttcaattgaagccgctgaagttggggtggagttgagacaaaattcaagttaatggtttcatcctcaccaattg 338  Q
    || |||||||||||||||| | |||||||||| |||||||||  |||||  ||||| |||||  |||| || |||| |||  ||||||||||  | ||||    
T  2854117 cattcaggcaatgtatctagtttagctttcaaatgaagccgcctaagttttggtggggttgacgcaaagtttaagtcaataatttcatcctctgctattg 2854216  T
Q  339 tagtgatattaagatcttcaaggtgtttcaattctactacaacaacacttaaggcatctccatgttttcttcttacacgccttaaagctaacttccttaa 438  Q
     ||||||||||||   ||||||||||| ||  ||| ||||  || |||||| ||| || ||||||| |||||||||| |||||||| ||||| | |||||    
T  2854217 cagtgatattaagtgattcaaggtgttgcatctcttctactgcagcacttatggcctccccatgttctcttcttacatgccttaaacctaaccttcttaa 2854316  T
Q  439 ctgctttaacattttcatctcgttaatgagatc 471  Q
    |||| |||||||||||||||| | |||||||||    
T  2854317 ctgccttaacattttcatctcttgaatgagatc 2854349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 6303530 - 6303642
Alignment:
Q  1 tcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctca 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6303530 tcttgctgtttt-tgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctca 6303628  T
Q  101 acgaattcacaaca 114  Q
    ||||||||||||||    
T  6303629 acgaattcacaaca 6303642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 10100036 - 10099924
Alignment:
Q  1 tcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctca 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10100036 tcttgctgttttt-gtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctca 10099938  T
Q  101 acgaattcacaaca 114  Q
    ||||||||||||||    
T  10099937 acgaattcacaaca 10099924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 10094035 - 10093923
Alignment:
Q  1 tcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctca 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  10094035 tcttgctgttttt-gtttggattatttgctacccgcttgatttgattacttggtattaatttgctccatgcatcaagtttttattggtgtggttttctca 10093937  T
Q  101 acgaattcacaaca 114  Q
    ||||||||||||||    
T  10093936 acgaattcacaaca 10093923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 10200917 - 10200805
Alignment:
Q  1 tcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctca 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  10200917 tcttgctgttttt-gtttggattatttgctacccgcttgatttgattacttggtattaatttgctccatgcatcaagtttttattggtgtggttttctca 10200819  T
Q  101 acgaattcacaaca 114  Q
    ||||||||||||||    
T  10200818 acgaattcacaaca 10200805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 10 - 114
Target Start/End: Original strand, 10897232 - 10897336
Alignment:
Q  10 tttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattca 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  10897232 tttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgttccacgcatcaagtttttattggtgtggttttctcaacgaattca 10897331  T
Q  110 caaca 114  Q
    |||||    
T  10897332 caaca 10897336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 139 - 479
Target Start/End: Original strand, 2836807 - 2837147
Alignment:
Q  139 cttcagcagatttggcaagttcttcagtgattgcagtggatcatttttcaacttagataaggccagctttatctcaacaagatactccagttttggaatc 238  Q
    |||||||| |||||||||||| |||||||| |||| |||||||| ||||| ||| ||||| |||||||||||||||||||||  ||| ||||| | || |    
T  2836807 cttcagcaaatttggcaagtttttcagtgactgcattggatcatctttcagcttggataaagccagctttatctcaacaagaccctcaagtttggaaacc 2836906  T
Q  239 caatcaggcaatgtatctaatctagctttcaattgaagccgctgaagttggggtggagttgagacaaaattcaagttaatggtttcatcctcaccaattg 338  Q
    |||| ||||||  | | || |||||||||||| |||||||||  |||||  ||||| ||||| ||||| ||||||| |||  |||||||||| |  ||||    
T  2836907 caattaggcaacttctgtagtctagctttcaaatgaagccgcctaagttttggtggggttgacacaaagttcaagtcaataatttcatcctcgcatattg 2837006  T
Q  339 tagtgatattaagatcttcaaggtgtttcaattctactacaacaacacttaaggcatctccatgttttcttcttacacgccttaaagctaacttccttaa 438  Q
     ||||||||||||   ||||||||| | ||  | | ||||  |  ||||||||||||  ||||||| |||| ||||| |||||||| ||||||||| |||    
T  2837007 cagtgatattaagtgattcaaggtgctgcatcttttctactgctgcacttaaggcattcccatgttctctttttacatgccttaaacctaacttccataa 2837106  T
Q  439 ctgctttaacattttcatctcgttaatgagatcgactcccc 479  Q
     ||| ||||||||| |||||| | ||| ||||| |||||||    
T  2837107 ttgccttaacatttccatctcttcaataagatctactcccc 2837147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 10 - 114
Target Start/End: Complemental strand, 22625933 - 22625829
Alignment:
Q  10 tttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattca 109  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  22625933 tttttgtttggattatttgctacccgcttcttttgattacttggtattaatttgctccacacatcaagtttttattggtgtggttttctcaacgaattca 22625834  T
Q  110 caaca 114  Q
    |||||    
T  22625833 caaca 22625829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 10594981 - 10594883
Alignment:
Q  16 tttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  10594981 tttggattatttgctacccgcttgatttgattacttggtattaatttactccacgtatcaagtttttattggtgtggttttctcaacgaattcacaaca 10594883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 11 - 115
Target Start/End: Original strand, 27544517 - 27544620
Alignment:
Q  11 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcac 110  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  27544517 ttttgtttggattatttgctacccgcttgatttgattacttgatattaatttgctcaacgcatcaag-ttttattggtgtggttttctcaacgaattcac 27544615  T
Q  111 aacag 115  Q
    |||||    
T  27544616 aacag 27544620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 54193445 - 54193557
Alignment:
Q  1 tcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctc- 99  Q
    |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||     
T  54193445 tcttgctgtttt-tgtttggattatttgctacccgcttggtttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtggttttctca 54193542  T
Q  100 aacgaattcacaaca 114  Q
    |||||||||||||||    
T  54193543 aacgaattcacaaca 54193557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 139 - 479
Target Start/End: Complemental strand, 2750929 - 2750589
Alignment:
Q  139 cttcagcagatttggcaagttcttcagtgattgcagtggatcatttttcaacttagataaggccagctttatctcaacaagatactccagttttggaatc 238  Q
    |||||| ||||||||||| || |||||||| ||||  ||||||| ||||| ||| ||||| |||||    |||| ||||||| |||| | ||||||||||    
T  2750929 cttcagaagatttggcaaatttttcagtgactgcaacggatcatctttcagcttggataaagccagacaaatctgaacaagacactcaaattttggaatc 2750830  T
Q  239 caatcaggcaatgtatctaatctagctttcaattgaagccgctgaagttggggtggagttgagacaaaattcaagttaatggtttcatcctcaccaattg 338  Q
    |||||||| ||  | |||| |||||||||||| || ||||| |||||||  ||||| |||||  |||| || |||| |||  ||||||||||  | ||||    
T  2750829 caatcaggaaacttctctagtctagctttcaaatggagccgttgaagttttggtggggttgacgcaaagtttaagtcaataatttcatcctcttctattg 2750730  T
Q  339 tagtgatattaagatcttcaaggtgtttcaattctactacaacaacacttaaggcatctccatgttttcttcttacacgccttaaagctaacttccttaa 438  Q
     ||||||||||||   ||||||||||| ||  |||  |||  || |||||| |||||  |||||||  ||||||||| || ||||| |||||||||||||    
T  2750729 cagtgatattaagtgattcaaggtgttgcatctcttgtactgcagcacttatggcattcccatgttcccttcttacatgctttaaacctaacttccttaa 2750630  T
Q  439 ctgctttaacattttcatctcgttaatgagatcgactcccc 479  Q
    |||| ||| |||||||||||| | ||||||||| |||||||    
T  2750629 ctgccttagcattttcatctcttcaatgagatctactcccc 2750589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 11 - 114
Target Start/End: Complemental strand, 29897631 - 29897527
Alignment:
Q  11 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaattca 109  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||||    
T  29897631 ttttgtttggattatttgctacccgcttgatttgattatttggtattaatctgctccacacatcaagtttgttattggtgtggttttctcaacgaattca 29897532  T
Q  110 caaca 114  Q
    |||||    
T  29897531 caaca 29897527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 11 - 114
Target Start/End: Original strand, 11079743 - 11079845
Alignment:
Q  11 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcac 110  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  11079743 ttttgtttgaattatttgctacccacttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtggttttcacaacgaattcac 11079841  T
Q  111 aaca 114  Q
    ||||    
T  11079842 aaca 11079845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 5858777 - 5858874
Alignment:
Q  17 ttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaa-cgaattcacaaca 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  5858777 ttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtggttttctcaatcgaattcacaaca 5858874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 10612725 - 10612627
Alignment:
Q  16 tttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 114  Q
    ||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  10612725 tttggattatttgctactcgcttgatttgattatctggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcataaca 10612627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 9 - 114
Target Start/End: Original strand, 4535841 - 4535946
Alignment:
Q  9 ttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattc 108  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||  ||||||||||    
T  4535841 ttttttgtttggattatttgctacccacttgatttgattacttggtattaatttgctccacgcattaaatttttattggtctggtttttacaacgaattc 4535940  T
Q  109 acaaca 114  Q
    ||||||    
T  4535941 acaaca 4535946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 10 - 114
Target Start/End: Complemental strand, 20031275 - 20031170
Alignment:
Q  10 tttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaag-tttttattggtgtggttttctcaacgaattc 108  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||| ||||||||||    
T  20031275 tttttgtttggattattcgctacccgcttgatttgattacttggtattaatttgctctacgcatcatgttttttattggtgtggttttcacaacgaattc 20031176  T
Q  109 acaaca 114  Q
    ||||||    
T  20031175 acaaca 20031170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 10 - 114
Target Start/End: Original strand, 54188737 - 54188841
Alignment:
Q  10 tttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctc-aacgaattc 108  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||    
T  54188737 tttttgtttggattatttgctacccgcttggtttgattacttggtattaatttgctccacgcatcaa-attttattggtgtggttttctcaaacgaattc 54188835  T
Q  109 acaaca 114  Q
    ||||||    
T  54188836 acaaca 54188841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 11 - 114
Target Start/End: Complemental strand, 29913908 - 29913805
Alignment:
Q  11 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaattca 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||||||||||||||||||| ||||||    
T  29913908 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatctgctccacacatcaagtttgttattggtgtggttttctcaac-aattca 29913810  T
Q  110 caaca 114  Q
    |||||    
T  29913809 caaca 29913805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 145 - 479
Target Start/End: Complemental strand, 2792242 - 2791908
Alignment:
Q  145 cagatttggcaagttcttcagtgattgcagtggatcatttttcaacttagataaggccagctttatctcaacaagatactccagttttggaatccaatca 244  Q
    |||||| |||||||| || ||||| |||||||||||||  |||||| |||| ||   |||  ||| || ||||||  |||| |||| |||||||||||||    
T  2792242 cagattcggcaagtttttgagtgactgcagtggatcatagttcaacatagaaaaactcagtcttaccttaacaaggcactcaagttctggaatccaatca 2792143  T
Q  245 ggcaatgtatctaatctagctttcaattgaagccgctgaagttggggtggagttgagacaaaattcaagttaatggtttcatcctcaccaattgtagtga 344  Q
    |||||  | | || |||||||||||| || |||||| |||||||||| || | ||| | | | |||||||  ||| |||||||||||   |||| || ||    
T  2792142 ggcaacttttgtagtctagctttcaaatgtagccgcagaagttggggaggggatgatatacagttcaagtcgatgatttcatcctcagatattgcagaga 2792043  T
Q  345 tattaagatcttcaaggtgtttcaattctactacaacaacacttaaggcatctccatgttttcttcttacacgccttaaagctaacttccttaactgctt 444  Q
    ||||||||| |||||||||||||| |||| ||||  || ||| ||||||||  ||||||| || ||||||  | |||||  ||||| ||||||||||| |    
T  2792042 tattaagatattcaaggtgtttcatttctgctactgcagcacataaggcattcccatgttctcgtcttacttgacttaagcctaacctccttaactgcct 2791943  T
Q  445 taacattttcatctcgttaatgagatcgactcccc 479  Q
    || |||||||||||| | ||||||||| |||||||    
T  2791942 tagcattttcatctcttgaatgagatctactcccc 2791908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 11 - 114
Target Start/End: Original strand, 3330117 - 3330221
Alignment:
Q  11 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaattca 109  Q
    |||||||||  |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||    
T  3330117 ttttgtttgagttatttgctatccgcttgatttgattacttggtattaatttgctccgcgcatcaagtttgttattggtgtggttttcacaacgaattca 3330216  T
Q  110 caaca 114  Q
    |||||    
T  3330217 caaca 3330221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 139 - 479
Target Start/End: Complemental strand, 5414819 - 5414479
Alignment:
Q  139 cttcagcagatttggcaagttcttcagtgattgcagtggatcatttttcaacttagataaggccagctttatctcaacaagatactccagttttggaatc 238  Q
    |||||| |||||||| ||||| ||||||||| |||  ||||||| | ||| ||| ||||| |||| | |||||| ||||||| | || |  |||| ||||    
T  5414819 cttcagaagatttggtaagtttttcagtgatggcataggatcatctgtcagcttggataacgccatcattatctgaacaagacattcaaactttgaaatc 5414720  T
Q  239 caatcaggcaatgtatctaatctagctttcaattgaagccgctgaagttggggtggagttgagacaaaattcaagttaatggtttcatcctcaccaattg 338  Q
    |||||||||||  | |||| |||||||||||| ||||||||  ||||||  || || ||||| ||||| || |||| |||  ||||||||||  | ||||    
T  5414719 caatcaggcaacttctctagtctagctttcaaatgaagccgacgaagttttggcggggttgacacaaagtttaagtcaataatttcatcctcggctattg 5414620  T
Q  339 tagtgatattaagatcttcaaggtgtttcaattctactacaacaacacttaaggcatctccatgttttcttcttacacgccttaaagctaacttccttaa 438  Q
     ||||||||||||   |||||||| || ||  ||||||||  | ||||||| |||||  || |||| |||||||||| || ||||| | |||||||||||    
T  5414619 cagtgatattaagtgattcaaggtattgcatctctactactgccacacttatggcattcccgtgttctcttcttacatgctttaaacccaacttccttaa 5414520  T
Q  439 ctgctttaacattttcatctcgttaatgagatcgactcccc 479  Q
    |||||| | ||| |||||||| | ||||||||| |||||||    
T  5414519 ctgcttaagcatcttcatctcttcaatgagatccactcccc 5414479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 11 - 114
Target Start/End: Complemental strand, 27761943 - 27761840
Alignment:
Q  11 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcac 110  Q
    ||||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||| ||||| ||||||||| ||    
T  27761943 ttttgtttgaattatttgctacccgcttgatttgattagttgatattaatttgctccatgcatcaagtttttattggtgtgtttttcacaacgaatttac 27761844  T
Q  111 aaca 114  Q
    ||||    
T  27761843 aaca 27761840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 145 - 470
Target Start/End: Complemental strand, 2770988 - 2770663
Alignment:
Q  145 cagatttggcaagttcttcagtgattgcagtggatcatttttcaacttagataaggccagctttatctcaacaagatactccagttttggaatccaatca 244  Q
    |||||| |||| ||| |||||||| |||||||||| || ||||||| |||| ||   |||  ||| || ||||||  |||| |||| |||||||||||||    
T  2770988 cagattcggcatgtttttcagtgactgcagtggattatctttcaacatagaaaaactcagtcttaccttaacaaggcactcaagttctggaatccaatca 2770889  T
Q  245 ggcaatgtatctaatctagctttcaattgaagccgctgaagttggggtggagttgagacaaaattcaagttaatggtttcatcctcaccaattgtagtga 344  Q
    |||||  | | || |||||||||||| || |||||| ||||||||||||| | ||| | | | ||||||| ||   |||||||||||   |||| |  ||    
T  2770888 ggcaacttctgtagtctagctttcaaatgtagccgcagaagttggggtggggatgatatacagttcaagtcaagtatttcatcctcagatattgcacaga 2770789  T
Q  345 tattaagatcttcaaggtgtttcaattctactacaacaacacttaaggcatctccatgttttcttcttacacgccttaaagctaacttccttaactgctt 444  Q
    ||||||||| |||||||||||||| |||| ||||  || ||| |||||| |  ||||||| || |||||| ||||||||  ||||| ||||||||||| |    
T  2770788 tattaagatgttcaaggtgtttcatttctgctactgcagcacataaggcgttcccatgttctcgtcttactcgccttaagcctaacctccttaactgcct 2770689  T
Q  445 taacattttcatctcgttaatgagat 470  Q
    || |||||||||||| | ||||||||    
T  2770688 tagcattttcatctcttgaatgagat 2770663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 10 - 116
Target Start/End: Complemental strand, 48390258 - 48390150
Alignment:
Q  10 tttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagt--ttttattggtgtggttttctcaacgaatt 107  Q
    |||||||||| |||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||  |||||||||||||  ||||||||||||||    
T  48390258 tttttgtttgaattatttgttacccgtttgatttgattacttgatattaatttgctccacgcatcaagtttttttattggtgtgactttctcaacgaatt 48390159  T
Q  108 cacaacagt 116  Q
    |||||||||    
T  48390158 cacaacagt 48390150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 10 - 114
Target Start/End: Complemental strand, 10949218 - 10949115
Alignment:
Q  10 tttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattca 109  Q
    |||||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| || ||||||||    
T  10949218 tttttgtttgaattatttgctacgagcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattgatgtggttttcacagcgaattca 10949120  T
Q  110 caaca 114  Q
    |||||    
T  10949119 caaca 10949115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 11 - 114
Target Start/End: Complemental strand, 47882840 - 47882738
Alignment:
Q  11 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcac 110  Q
    ||||||||| ||||||| |||||| ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||    
T  47882840 ttttgtttgaattatttactacccacttgatttgattaattggtattaatttgctccacgcatcaag-ttttattggtgtggttttcacaatgaattcac 47882742  T
Q  111 aaca 114  Q
    ||||    
T  47882741 aaca 47882738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 47878128 - 47878033
Alignment:
Q  11 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattc 108  Q
    ||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  47878128 ttttgtttgaattatttgctacccacttgatttgattactt-gtattaatttgctccacgcatcaag-ttttattggtgtggttttcacaacgaattc 47878033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 10 - 81
Target Start/End: Original strand, 16462424 - 16462495
Alignment:
Q  10 tttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttt 81  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16462424 tttttgtttggattaattgatacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttt 16462495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 146 - 471
Target Start/End: Complemental strand, 2799288 - 2798963
Alignment:
Q  146 agatttggcaagttcttcagtgattgcagtggatcatttttcaacttagataaggccagctttatctcaacaagatactccagttttggaatccaatcag 245  Q
    ||||| || ||||| | |||||| |||| |||||||| ||||||| |||| |||  |||||||| || ||| ||| |||| ||||||| ||||||||| |    
T  2799288 agattcggtaagttttgcagtgactgcaatggatcatatttcaacatagaaaagctcagctttaccttaacgagacactcaagttttgcaatccaatcgg 2799189  T
Q  246 gcaatgtatctaatctagctttcaattgaagccgctgaagttggggtggagttgagacaaaattcaagttaatggtttcatcctcaccaattgtagtgat 345  Q
    ||||  | | || |||| ||||||| || |||||||||||||||||||| | ||| | ||| |||| || |||  ||||||||||    |||   | |||    
T  2799188 gcaacttctgtagtctacctttcaaatgtagccgctgaagttggggtggggatgatataaagttcaggtcaataatttcatcctccgatattactgagat 2799089  T
Q  346 attaagatcttcaaggtgtttcaattctactacaacaacacttaaggcatctccatgttttcttcttacacgccttaaagctaacttccttaactgcttt 445  Q
    ||| |||| |||||||||| ||| |||| ||||| || ||||||||| ||  ||||||| || ||| ||| |||||||| || |  ||||||| | | ||    
T  2799088 attcagattttcaaggtgtgtcatttctgctacagcagcacttaaggaattcccatgttctcctctgacatgccttaaacctgaactccttaaattcctt 2798989  T
Q  446 aacattttcatctcgttaatgagatc 471  Q
    | ||||||||| || | |||||||||    
T  2798988 agcattttcatttcttgaatgagatc 2798963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 21 - 114
Target Start/End: Original strand, 38003103 - 38003195
Alignment:
Q  21 attatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 114  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||  |||  |||||||||||    
T  38003103 attatttgctacccactttatttgattacttggtattaatttgctccacgcgtcaa-attttattggtgtggtttttacaatcaattcacaaca 38003195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 31 - 102
Target Start/End: Original strand, 7418306 - 7418378
Alignment:
Q  31 acccgcttgatttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgtggttttctcaac 102  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||| ||||    
T  7418306 acccgcttgatttgattactttgtattaatttgttccacgcatcaagtttattattggtgtggttttcacaac 7418378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 11 - 113
Target Start/End: Original strand, 13893686 - 13893789
Alignment:
Q  11 ttttgtttggattat-ttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattca 109  Q
    ||||||||| ||||| |||  |||||||||||||||||  || || |||||||| || |||||||||| ||||||||||||| ||||| |||||||||||    
T  13893686 ttttgtttgaattatattgtcacccgcttgatttgattgtttagttttaatttgttcaacgcatcaaggttttattggtgtgtttttcacaacgaattca 13893785  T
Q  110 caac 113  Q
    ||||    
T  13893786 caac 13893789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 55 - 114
Target Start/End: Original strand, 16997150 - 16997209
Alignment:
Q  55 attaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 114  Q
    |||||||||||||||  ||||||| |||||||||||| |||||||| |||||| ||||||    
T  16997150 attaatttgctccacatatcaagtatttattggtgtgattttctcaccgaatttacaaca 16997209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 55 - 112
Target Start/End: Complemental strand, 1620370 - 1620313
Alignment:
Q  55 attaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaa 112  Q
    |||||||| ||||||  |||||||||||||||||||| |||| | |||||||||||||    
T  1620370 attaattttctccacatatcaagtttttattggtgtgatttttttaacgaattcacaa 1620313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 36871202 - 36871149
Alignment:
Q  61 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 114  Q
    ||||||||| |||||||| ||||| |||||| |||| |||||||||||||||||    
T  36871202 ttgctccacacatcaagtatttatcggtgtgattttttcaacgaattcacaaca 36871149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 24980073 - 24980128
Alignment:
Q  61 ttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaattcacaacagt 116  Q
    ||||||||| |||||||||| ||||||||||| |||||||| |||||||||||||||    
T  24980073 ttgctccacacatcaagtttgttattggtgtg-ttttctcatcgaattcacaacagt 24980128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 107
Target Start/End: Complemental strand, 53468349 - 53468302
Alignment:
Q  61 ttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaatt 107  Q
    ||||||||| |||||||||| |||||||||||||||||||| ||||||    
T  53468349 ttgctccacacatcaagtttgttattggtgtggttttctcatcgaatt 53468302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 54 - 114
Target Start/End: Complemental strand, 14634350 - 14634291
Alignment:
Q  54 tattaatttgctccacgcatcaagt-ttttattggtgtggttttctcaacgaattcacaaca 114  Q
    |||||||||| ||||| |||||||| ||||||||||||| |||||  |||||||||||||||    
T  14634350 tattaatttgttccacacatcaagtattttattggtgtgattttc--aacgaattcacaaca 14634291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 51674662 - 51674608
Alignment:
Q  61 ttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaattcacaaca 114  Q
    ||||||||  |||||||||| ||||||||||| |||||||| |||||||||||||    
T  51674662 ttgctccatacatcaagtttgttattggtgtgattttctcatcgaattcacaaca 51674608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 114
Target Start/End: Original strand, 747125 - 747177
Alignment:
Q  61 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 114  Q
    ||||||||| ||||||||| ||||||||||| |||| ||| |||||||||||||    
T  747125 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcacaaca 747177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 10621418 - 10621366
Alignment:
Q  61 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 114  Q
    ||||||||| ||||||||| ||||||||||| |||| ||| |||||||||||||    
T  10621418 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcacaaca 10621366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 114
Target Start/End: Original strand, 25389273 - 25389326
Alignment:
Q  61 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 114  Q
    ||||||||| ||||||||| |||||||| || |||| ||| |||||||||||||    
T  25389273 ttgctccacacatcaagttgttattggtatgattttttcatcgaattcacaaca 25389326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 28412922 - 28412870
Alignment:
Q  61 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 114  Q
    ||||||||| ||||||||| |||||||||| ||||| ||| |||||||||||||    
T  28412922 ttgctccacacatcaagttgttattggtgt-gttttttcatcgaattcacaaca 28412870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 114
Target Start/End: Original strand, 31151702 - 31151754
Alignment:
Q  61 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 114  Q
    ||||||||| |||||||| |||||||||||| |||| ||| |||||||||||||    
T  31151702 ttgctccacacatcaagtatttattggtgtgatttt-tcatcgaattcacaaca 31151754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 114
Target Start/End: Original strand, 38210737 - 38210789
Alignment:
Q  61 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 114  Q
    ||||||||| ||||||||| ||||||||||| |||| ||| |||||||||||||    
T  38210737 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcacaaca 38210789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 114
Target Start/End: Original strand, 50494365 - 50494417
Alignment:
Q  61 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 114  Q
    ||||||||| ||||||||| ||||||||||| |||| ||| |||||||||||||    
T  50494365 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcacaaca 50494417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 117
Target Start/End: Complemental strand, 9604499 - 9604444
Alignment:
Q  61 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaacagta 117  Q
    ||||||||| ||||||||| ||||||||||| |||| ||| ||||||| ||||||||    
T  9604499 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcgcaacagta 9604444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 71 - 114
Target Start/End: Original strand, 39715839 - 39715883
Alignment:
Q  71 catcaagttt-ttattggtgtggttttctcaacgaattcacaaca 114  Q
    |||||||||| ||||||||| |||||||||| |||||||||||||    
T  39715839 catcaagtttgttattggtgcggttttctcatcgaattcacaaca 39715883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 110; Significance: 3e-55; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 33670930 - 33670817
Alignment:
Q  1 tcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  33670930 tcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgatccacgcatcaagtttttattggtgtggttttctca 33670831  T
Q  101 acgaattcacaaca 114  Q
    ||||||||||||||    
T  33670830 acgaattcacaaca 33670817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 39687207 - 39687322
Alignment:
Q  1 tcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtgg-ttttctc 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  39687207 tcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtttttctc 39687306  T
Q  100 aacgaattcacaacag 115  Q
    ||||||||||||||||    
T  39687307 aacgaattcacaacag 39687322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 39680263 - 39680377
Alignment:
Q  1 tcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtgg-ttttctc 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  39680263 tcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtttttctc 39680362  T
Q  100 aacgaattcacaaca 114  Q
    |||||||||||||||    
T  39680363 aacgaattcacaaca 39680377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 10 - 112
Target Start/End: Complemental strand, 12781177 - 12781075
Alignment:
Q  10 tttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattca 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  12781177 tttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtatggttttctcaacgaattca 12781078  T
Q  110 caa 112  Q
    |||    
T  12781077 caa 12781075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 45679941 - 45680054
Alignment:
Q  1 tcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtgg-ttttctc 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  45679941 tcttgctgtttt-tgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtttttctc 45680039  T
Q  100 aacgaattcacaaca 114  Q
    |||||||||||||||    
T  45680040 aacgaattcacaaca 45680054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 10 - 115
Target Start/End: Complemental strand, 27517594 - 27517490
Alignment:
Q  10 tttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattca 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  27517594 tttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtggttttctcaacgaattca 27517496  T
Q  110 caacag 115  Q
    ||||||    
T  27517495 caacag 27517490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 2736423 - 2736536
Alignment:
Q  1 tcttgctgtttt-ttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctc 99  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  2736423 tcttgctgtttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctctacgcatcaag-ttttattggtgtggttttctc 2736521  T
Q  100 aacgaattcacaaca 114  Q
    |||||||||||||||    
T  2736522 aacgaattcacaaca 2736536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 17943751 - 17943867
Alignment:
Q  1 tcttgctgtttt--ttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgtggttttc 97  Q
    ||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  17943751 tcttgctgttttatttgtttggattatttgctacccgcttaatttgattacttggtattaatttgctccacgcatcaagtttgttattggtgtgtttttc 17943850  T
Q  98 tcaacgaattcacaaca 114  Q
    |||||||||||||||||    
T  17943851 tcaacgaattcacaaca 17943867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 10 - 114
Target Start/End: Complemental strand, 22712477 - 22712374
Alignment:
Q  10 tttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattca 109  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  22712477 tttttgtttggattaattgatacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtggttttctcaacgaattca 22712379  T
Q  110 caaca 114  Q
    |||||    
T  22712378 caaca 22712374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 10 - 114
Target Start/End: Complemental strand, 22717186 - 22717083
Alignment:
Q  10 tttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattca 109  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  22717186 tttttgtttggattaattgctacccgcttgatttgattacttggtattaatttgctccatgcatcaag-ttttattggtgtggttttctcaacgaattca 22717088  T
Q  110 caaca 114  Q
    |||||    
T  22717087 caaca 22717083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 11 - 114
Target Start/End: Original strand, 17462664 - 17462767
Alignment:
Q  11 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcac 110  Q
    |||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  17462664 ttttgtgtggattaattgctacccgcttgatttgattactcggtattaatttgctccacacatcaagtttttattggtgtggttttctcaacgaattcac 17462763  T
Q  111 aaca 114  Q
    ||||    
T  17462764 aaca 17462767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 20054710 - 20054610
Alignment:
Q  16 tttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagt--ttttattggtgtggttttctcaacgaattcacaac 113  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  20054710 tttggattatttgctatccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttttattggtgtggttttctcaacgaattcacaac 20054611  T
Q  114 a 114  Q
    |    
T  20054610 a 20054610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 11 - 114
Target Start/End: Complemental strand, 37170710 - 37170607
Alignment:
Q  11 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcac 110  Q
    ||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  37170710 ttttgtttgaattatttactacccacttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtgattttcacaacgaattcac 37170611  T
Q  111 aaca 114  Q
    ||||    
T  37170610 aaca 37170607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 2741159 - 2741260
Alignment:
Q  1 tcttgctgtttt-ttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctc 99  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  2741159 tcttgctgtttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctctacgcatcaag-ttttattggtgtggttttctc 2741257  T
Q  100 aac 102  Q
    |||    
T  2741258 aac 2741260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 16 - 115
Target Start/End: Complemental strand, 20049966 - 20049865
Alignment:
Q  16 tttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagt--ttttattggtgtggttttctcaacgaattcacaac 113  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  20049966 tttggattatttgctatccgattgatttgattacttggtattaatttgctccacgcatcaagtttttttattggtgtggttttctcaacgaattcacaac 20049867  T
Q  114 ag 115  Q
    ||    
T  20049866 ag 20049865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 9 - 114
Target Start/End: Original strand, 38191241 - 38191345
Alignment:
Q  9 ttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattc 108  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||| ||||||||||    
T  38191241 ttttttgtttgaattatttgctacccgcttgatttgattacttggtattaatttgctccacgcattaag-ttttattggtgtgattttcacaacgaattc 38191339  T
Q  109 acaaca 114  Q
    ||||||    
T  38191340 acaaca 38191345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 10 - 112
Target Start/End: Original strand, 30479221 - 30479322
Alignment:
Q  10 tttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattca 109  Q
    ||||||||||||||||||||||||| ||||||||||||| || || ||||||| |||||||||||||| | |||||| ||||||||||||||| ||||||    
T  30479221 tttttgtttggattatttgctacccacttgatttgattattttgtgttaatttactccacgcatcaag-tattattgatgtggttttctcaacaaattca 30479319  T
Q  110 caa 112  Q
    |||    
T  30479320 caa 30479322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 19007997 - 19008053
Alignment:
Q  61 ttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaattcacaacagt 116  Q
    ||||||||| |||||||||| ||||||||||| |||| ||| |||||||||||||||    
T  19007997 ttgctccacacatcaagtttgttattggtgtgattttttcatcgaattcacaacagt 19008053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 59 - 114
Target Start/End: Complemental strand, 28458751 - 28458693
Alignment:
Q  59 atttgctccacgcatcaagttttt---attggtgtggttttctcaacgaattcacaaca 114  Q
    |||||||| |||||||||||||||   ||||||||||||||| ||| ||||||||||||    
T  28458751 atttgctctacgcatcaagttttttttattggtgtggttttcacaatgaattcacaaca 28458693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 60 - 114
Target Start/End: Complemental strand, 7462844 - 7462789
Alignment:
Q  60 tttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaattcacaaca 114  Q
    |||||||||| |||||||||| |||| | ||||||||||||||||||||| |||||    
T  7462844 tttgctccacacatcaagtttgttatcgatgtggttttctcaacgaattcgcaaca 7462789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 115
Target Start/End: Original strand, 17849474 - 17849529
Alignment:
Q  61 ttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaattcacaacag 115  Q
    ||||||||| |||||||||| ||||||||||| |||| ||| ||||||||||||||    
T  17849474 ttgctccacacatcaagtttgttattggtgtgattttttcatcgaattcacaacag 17849529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 22287234 - 22287181
Alignment:
Q  61 ttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaattcacaaca 114  Q
    ||||||||| |||||||||| ||||||||||| |||||||| |||||||||||||    
T  22287234 ttgctccacacatcaagtttgttattggtgtg-ttttctcatcgaattcacaaca 22287181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 42923346 - 42923293
Alignment:
Q  61 ttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaattcacaaca 114  Q
    ||||||||| |||||||||| ||||||||||| ||||| ||||||||||||||||    
T  42923346 ttgctccacacatcaagtttgttattggtgtg-ttttcacaacgaattcacaaca 42923293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 42923404 - 42923351
Alignment:
Q  61 ttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaattcacaaca 114  Q
    ||||||||| |||||||||| ||||||||||| ||||| ||||||||||||||||    
T  42923404 ttgctccacacatcaagtttgttattggtgtg-ttttcacaacgaattcacaaca 42923351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 36558773 - 36558721
Alignment:
Q  61 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 114  Q
    ||||||||| ||||||||| ||||||||||| |||| ||| |||||||||||||    
T  36558773 ttgctccacacatcaagttattattggtgtgatttt-tcatcgaattcacaaca 36558721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 36561033 - 36560981
Alignment:
Q  61 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 114  Q
    ||||||||| ||||||||| ||||||||||| |||| ||| |||||||||||||    
T  36561033 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcacaaca 36560981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 107; Significance: 2e-53; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 31248656 - 31248543
Alignment:
Q  1 tcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctca 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31248656 tcttgctgttttt-gtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctca 31248558  T
Q  101 acgaattcacaacag 115  Q
    |||||||||||||||    
T  31248557 acgaattcacaacag 31248543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 11 - 114
Target Start/End: Complemental strand, 3577441 - 3577338
Alignment:
Q  11 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcac 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3577441 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcac 3577342  T
Q  111 aaca 114  Q
    ||||    
T  3577341 aaca 3577338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 9 - 115
Target Start/End: Complemental strand, 25465859 - 25465753
Alignment:
Q  9 ttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattc 108  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25465859 ttttttgtttggattatttgctacacgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattc 25465760  T
Q  109 acaacag 115  Q
    |||||||    
T  25465759 acaacag 25465753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 10 - 114
Target Start/End: Original strand, 25941896 - 25942000
Alignment:
Q  10 tttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattca 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  25941896 tttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgttccacgcatcaagtttttattggtgtggttttctcaacgaattca 25941995  T
Q  110 caaca 114  Q
    |||||    
T  25941996 caaca 25942000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 13878957 - 13879070
Alignment:
Q  1 tcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtgg-ttttctc 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  13878957 tcttgctgtttt-tgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttttttggtgtggtttttctc 13879055  T
Q  100 aacgaattcacaaca 114  Q
    |||||||||||||||    
T  13879056 aacgaattcacaaca 13879070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 13883693 - 13883806
Alignment:
Q  1 tcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaag-tttttattggtgtggttttctc 99  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  13883693 tcttgctgtttt-tgtttggattatttgctacccgtttgatttgattacttggtattaatttgctccacgcatcaagttttttattggtgtggttttctc 13883791  T
Q  100 aacgaattcacaaca 114  Q
    |||||||||||||||    
T  13883792 aacgaattcacaaca 13883806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 35201268 - 35201157
Alignment:
Q  1 tcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctca 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  35201268 tcttgctgttttt-gtttggattatttgctacccgcttgatttgattacttg-tattaatttgctccacgcatcaagtttttattagtgtggttttctca 35201171  T
Q  101 acgaattcacaaca 114  Q
    ||||||||||||||    
T  35201170 acgaattcacaaca 35201157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 17694799 - 17694701
Alignment:
Q  16 tttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 114  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  17694799 tttggattatttgctatccgcttgatttgattacttggtattaatttgctccacacatcaagtttttattggtgtggttttctcaacgaattcacaaca 17694701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 10 - 114
Target Start/End: Original strand, 16786161 - 16786264
Alignment:
Q  10 tttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattca 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||||| ||||||    
T  16786161 tttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaag-tcttattgttgtggttttctcaacaaattca 16786259  T
Q  110 caaca 114  Q
    |||||    
T  16786260 caaca 16786264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 11 - 114
Target Start/End: Complemental strand, 26887180 - 26887077
Alignment:
Q  11 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcac 110  Q
    |||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  26887180 ttttgtttggattaattgctacccgcttgttttgattacttgatattaatttgctccacacatcaagtttttattggtgtggttttctcgacgaattcac 26887081  T
Q  111 aaca 114  Q
    ||||    
T  26887080 aaca 26887077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 30987467 - 30987356
Alignment:
Q  1 tcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctca 100  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||     
T  30987467 tcttgctgttttt-gtttggattatttgctacccacttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtggtttcctcg 30987370  T
Q  101 acgaattcacaaca 114  Q
     |||||||||||||    
T  30987369 tcgaattcacaaca 30987356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 17038455 - 17038550
Alignment:
Q  1 tcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttc 97  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  17038455 tcttgctgtttt-tgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccatgcatcaagtttttattggtgtgattttc 17038550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 11 - 114
Target Start/End: Original strand, 33216055 - 33216159
Alignment:
Q  11 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaag-tttttattggtgtggttttctcaacgaattca 109  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||  ||| |||||||    
T  33216055 ttttgtttggattatttgctacccgcttgatatgattacttggtattaatttgctccacgcatcaagttttttattggtgtggtttttacaaggaattca 33216154  T
Q  110 caaca 114  Q
    |||||    
T  33216155 caaca 33216159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 11 - 102
Target Start/End: Complemental strand, 12166102 - 12166010
Alignment:
Q  11 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgtggttttctcaac 102  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  12166102 ttttgtttgaattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttattattggtgtggttttcacaac 12166010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 11 - 114
Target Start/End: Complemental strand, 13467422 - 13467318
Alignment:
Q  11 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatc-aagtttttattggtgtggttttctcaacgaattca 109  Q
    ||||||||| || |||||||||||| |||||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||| |||||||||||    
T  13467422 ttttgtttgaatcatttgctacccgtttgatttgattacttggtattaatttactccacgcatcaaattttttattggtgtggttttcacaacgaattca 13467323  T
Q  110 caaca 114  Q
    |||||    
T  13467322 caaca 13467318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 22351801 - 22351704
Alignment:
Q  16 tttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 114  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||  ||||||||||||||||    
T  22351801 tttggattatttgttacccgcttgatttgattacttggtattaatttgctccacacatcaag-ttttattggtgtgatttttacaacgaattcacaaca 22351704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 11 - 114
Target Start/End: Complemental strand, 19701860 - 19701757
Alignment:
Q  11 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaattca 109  Q
    ||||||||| ||||||||||| ||| |||||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||| |||||||||||    
T  19701860 ttttgtttgaattatttgctatccgtttgatttgattacttggt-ttaatttgttccacgcatcaagtttattattggtgtggttttcacaacgaattca 19701762  T
Q  110 caaca 114  Q
    |||||    
T  19701761 caaca 19701757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 22342747 - 22342652
Alignment:
Q  18 tggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 114  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||  ||||||| ||||||||||||| ||||  ||||||||||||||||    
T  22342747 tggattatttgctacccgcttgatttgattatttggtattaatttgctccatacatcaag-ttttattggtgtgatttttacaacgaattcacaaca 22342652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 36 - 110
Target Start/End: Complemental strand, 5165772 - 5165697
Alignment:
Q  36 cttgatttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaattcac 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||    
T  5165772 cttgatttgattacttggtattaatttgctccacgcatcaagtttattattggtgtgtttttcacaacgaattcac 5165697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 11 - 96
Target Start/End: Original strand, 26643399 - 26643483
Alignment:
Q  11 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtttt 96  Q
    ||||||||| ||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  26643399 ttttgtttgaattattttctatccgcttgatttcattacttggtattaatttgctccacgcatcaag-ttttattggtgtgctttt 26643483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 11 - 96
Target Start/End: Original strand, 26749365 - 26749449
Alignment:
Q  11 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtttt 96  Q
    ||||||||| ||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  26749365 ttttgtttgaattattttctatccgcttgatttcattacttggtattaatttgctccacgcatcaag-ttttattggtgtgctttt 26749449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 10 - 117
Target Start/End: Original strand, 17066075 - 17066184
Alignment:
Q  10 tttttgtttggattat-ttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaag-tttttattggtgtggttttctcaacgaatt 107  Q
    |||||||||| ||||| |||  ||| ||||||||||||| |||| | ||||||| |||||||||||| | |||||||||||||||||||| ||| |||||    
T  17066075 tttttgtttgaattatattgtcaccagcttgatttgattgcttgattttaatttactccacgcatcaggttttttattggtgtggttttcacaatgaatt 17066174  T
Q  108 cacaacagta 117  Q
    ||||| ||||    
T  17066175 cacaatagta 17066184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 61 - 114
Target Start/End: Original strand, 10584359 - 10584413
Alignment:
Q  61 ttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaattcacaaca 114  Q
    ||||||||| |||||||||| |||||||||||||||||||| |||||||||||||    
T  10584359 ttgctccacacatcaagtttgttattggtgtggttttctcatcgaattcacaaca 10584413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 36 - 69
Target Start/End: Complemental strand, 5165805 - 5165772
Alignment:
Q  36 cttgatttgattacttggtattaatttgctccac 69  Q
    ||||||||||||||||||||||||||||||||||    
T  5165805 cttgatttgattacttggtattaatttgctccac 5165772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 5273108 - 5273055
Alignment:
Q  61 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 114  Q
    ||||||||| ||||||||| ||||||||||| |||| ||| |||||||||||||    
T  5273108 ttgctccacacatcaagttgttattggtgtgattttttcatcgaattcacaaca 5273055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 60 - 114
Target Start/End: Complemental strand, 3629765 - 3629711
Alignment:
Q  60 tttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaattcacaaca 114  Q
    |||||||||| |||||||||| ||||||||||| |||||||| |||||||||||||    
T  3629765 tttgctccacacatcaagtttgttattggtgtg-ttttctcatcgaattcacaaca 3629711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 61 - 114
Target Start/End: Original strand, 26065403 - 26065457
Alignment:
Q  61 ttgctccacgcatcaagtttttattggtgtg-gttttctcaacgaattcacaaca 114  Q
    ||||||||| ||||||||| |||||||||||  |||||||| |||||||||||||    
T  26065403 ttgctccacacatcaagttgttattggtgtgatttttctcatcgaattcacaaca 26065457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 61 - 114
Target Start/End: Original strand, 26085372 - 26085426
Alignment:
Q  61 ttgctccacgcatcaagtttttattggtgtg-gttttctcaacgaattcacaaca 114  Q
    ||||||||| ||||||||| |||||||||||  |||||||| |||||||||||||    
T  26085372 ttgctccacacatcaagttgttattggtgtgatttttctcatcgaattcacaaca 26085426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 61 - 115
Target Start/End: Complemental strand, 29754601 - 29754548
Alignment:
Q  61 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaacag 115  Q
    ||||||||| ||||||||| ||||||||||| |||| ||| ||||||||||||||    
T  29754601 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcacaacag 29754548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 8717247 - 8717195
Alignment:
Q  61 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 114  Q
    ||||||||| ||||||||| ||||||||||| |||| ||| |||||||||||||    
T  8717247 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcacaaca 8717195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 11982924 - 11982872
Alignment:
Q  61 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 114  Q
    ||||||||| ||||||||| ||||||||||| |||| ||| |||||||||||||    
T  11982924 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcacaaca 11982872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 12195406 - 12195354
Alignment:
Q  61 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 114  Q
    ||||||||| ||||||||| ||||||||||| |||| ||| |||||||||||||    
T  12195406 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcacaaca 12195354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 26066013 - 26065961
Alignment:
Q  61 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 114  Q
    ||||||||| ||||||||| ||||||||||| |||| ||| |||||||||||||    
T  26066013 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcacaaca 26065961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 26068287 - 26068235
Alignment:
Q  61 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 114  Q
    ||||||||| ||||||||| ||||||||||| |||| ||| |||||||||||||    
T  26068287 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcacaaca 26068235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 114
Target Start/End: Complemental strand, 28037631 - 28037576
Alignment:
Q  60 tttgctccacgcatcaagt--ttttattggtgtggttttctcaacgaattcacaaca 114  Q
    |||||||||| ||||||||  ||||||||||||| |||| |||||||||||||||||    
T  28037631 tttgctccacacatcaagtatttttattggtgtgatttt-tcaacgaattcacaaca 28037576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1050 (Bit Score: 106; Significance: 8e-53; HSPs: 1)
Name: scaffold1050
Description:

Target: scaffold1050; HSP #1
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 3031 - 2919
Alignment:
Q  1 tcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctca 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3031 tcttgctgttttt-gtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctca 2933  T
Q  101 acgaattcacaaca 114  Q
    ||||||||||||||    
T  2932 acgaattcacaaca 2919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 106; Significance: 8e-53; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 17712 - 17824
Alignment:
Q  1 tcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctca 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17712 tcttgctgtttt-tgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctca 17810  T
Q  101 acgaattcacaaca 114  Q
    ||||||||||||||    
T  17811 acgaattcacaaca 17824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 106; Significance: 8e-53; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 25684859 - 25684972
Alignment:
Q  1 tcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctca 100  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25684859 tcttgctgttttttgtttggattatttgctacccacttgttttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctca 25684958  T
Q  101 acgaattcacaaca 114  Q
    ||||||||||||||    
T  25684959 acgaattcacaaca 25684972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 4812445 - 4812336
Alignment:
Q  1 tcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctca 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4812445 tcttgctgttttt-gtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctca 4812347  T
Q  101 acgaattcaca 111  Q
    |||||||||||    
T  4812346 acgaattcaca 4812336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 16752487 - 16752374
Alignment:
Q  1 tcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtgg-ttttctc 99  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  16752487 tcttgctgttttt-gtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtttttctc 16752389  T
Q  100 aacgaattcacaaca 114  Q
    |||||||||||||||    
T  16752388 aacgaattcacaaca 16752374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 16757223 - 16757110
Alignment:
Q  1 tcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtgg-ttttctc 99  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  16757223 tcttgctgttttt-gtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtttttctc 16757125  T
Q  100 aacgaattcacaaca 114  Q
    |||||||||||||||    
T  16757124 aacgaattcacaaca 16757110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 28328126 - 28328239
Alignment:
Q  1 tcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtgg-ttttctc 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  28328126 tcttgctgtttt-tgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtttttctc 28328224  T
Q  100 aacgaattcacaaca 114  Q
    |||||||||||||||    
T  28328225 aacgaattcacaaca 28328239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 28332849 - 28332962
Alignment:
Q  1 tcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtgg-ttttctc 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  28332849 tcttgctgtttt-tgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtttttctc 28332947  T
Q  100 aacgaattcacaaca 114  Q
    |||||||||||||||    
T  28332948 aacgaattcacaaca 28332962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 28895721 - 28895832
Alignment:
Q  1 tcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctca 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  28895721 tcttgctgtttt-tgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtggttttctca 28895818  T
Q  101 acgaattcacaaca 114  Q
    ||||||||||||||    
T  28895819 acgaattcacaaca 28895832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 10 - 114
Target Start/End: Original strand, 28890992 - 28891095
Alignment:
Q  10 tttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattca 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  28890992 tttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccatgcatcaag-ttttattggtgtggttttctcaacgaattca 28891090  T
Q  110 caaca 114  Q
    |||||    
T  28891091 caaca 28891095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 11 - 114
Target Start/End: Original strand, 3276523 - 3276626
Alignment:
Q  11 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcac 110  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  ||| ||||||||    
T  3276523 ttttgtttggattatttgctacccgcttgatttgattacttgttattaatttgctccacgcatcaagtttttattggtgtggttttaacaaggaattcac 3276622  T
Q  111 aaca 114  Q
    ||||    
T  3276623 aaca 3276626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 11 - 114
Target Start/End: Complemental strand, 9021060 - 9020957
Alignment:
Q  11 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcac 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| || |||||||    
T  9021060 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcattaagtctttattggtgtggttttctcgacaaattcac 9020961  T
Q  111 aaca 114  Q
    ||||    
T  9020960 aaca 9020957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 11 - 114
Target Start/End: Complemental strand, 23179512 - 23179410
Alignment:
Q  11 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcac 110  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  23179512 ttttgtttgaattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtggttttcacaacgaattcac 23179414  T
Q  111 aaca 114  Q
    ||||    
T  23179413 aaca 23179410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 591029 - 591126
Alignment:
Q  17 ttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  591029 ttggattatttgctacccgcttgatttgattacttggtattaattttttccacgcatcaaatttttattggtgtggttttctcaacgaattcacaaca 591126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 11 - 114
Target Start/End: Complemental strand, 17799381 - 17799278
Alignment:
Q  11 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcac 110  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| || |||  |||||||||||||||||||||||||| ||||||||||||    
T  17799381 ttttgtttgaattatttgctacccgcttgatttgattacttggtattaatttacttcacatatcaagtttttattggtgtggttttcacaacgaattcac 17799282  T
Q  111 aaca 114  Q
    ||||    
T  17799281 aaca 17799278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 15 - 114
Target Start/End: Complemental strand, 29554803 - 29554705
Alignment:
Q  15 gtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 114  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  29554803 gtttggattatttgctaccagcttgatttgattacttgatattaatttactccacgcatcaag-tattattggtgtggttttctcaacgaattcacaaca 29554705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 21034100 - 21034181
Alignment:
Q  16 tttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaag-tttttattggtgtggtttt 96  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  21034100 tttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttttattggtgtggtttt 21034181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 11 - 115
Target Start/End: Complemental strand, 26268188 - 26268083
Alignment:
Q  11 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaattca 109  Q
    ||||||||| ||||||| ||||| ||||||||| ||||| |||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||    
T  26268188 ttttgtttgaattattttctaccagcttgatttaattacatggtattaatttgctccacgcatcaagtttattattggtgtggttttcagaacgaattca 26268089  T
Q  110 caacag 115  Q
    ||||||    
T  26268088 caacag 26268083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 42 - 114
Target Start/End: Complemental strand, 4823622 - 4823551
Alignment:
Q  42 ttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 114  Q
    ||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  4823622 ttgattacttggtattaattttctccacacatcaagtttt-attggtgtggttttctcaacgaattcacaaca 4823551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 11 - 102
Target Start/End: Original strand, 33032879 - 33032971
Alignment:
Q  11 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaag-tttttattggtgtggttttctcaac 102  Q
    ||||||||  |||||||||||| ||||||||||||||||||| ||||||||||||| | |||||||| ||||||||||||| |||||| ||||    
T  33032879 ttttgttttaattatttgctactcgcttgatttgattacttgatattaatttgctctatgcatcaagttttttattggtgtcgttttcacaac 33032971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 10 - 114
Target Start/End: Original strand, 30423438 - 30423541
Alignment:
Q  10 tttttgtttggattat-ttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattc 108  Q
    |||||||||| ||||| |||  ||||||||||||||||| |||||| || ||||||||||| ||||||| ||||||||||||| ||||  ||| ||||||    
T  30423438 tttttgtttgaattatattgtcacccgcttgatttgattgcttggt-tttatttgctccacacatcaag-ttttattggtgtgatttttgcaatgaattc 30423535  T
Q  109 acaaca 114  Q
    ||||||    
T  30423536 acaaca 30423541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 10 - 114
Target Start/End: Complemental strand, 2267039 - 2266936
Alignment:
Q  10 tttttgtttggatt-atttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattc 108  Q
    |||||||||| ||| |||||  ||| |||||||||||||  ||||| ||| ||||||| || |||||||||| |||||||||| ||||  ||||||||||    
T  2267039 tttttgtttgaatttatttgtcacctgcttgatttgattgtttggtttta-tttgctc-acacatcaagtttatattggtgtgatttttgcaacgaattc 2266942  T
Q  109 acaaca 114  Q
    ||||||    
T  2266941 acaaca 2266936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 61 - 114
Target Start/End: Original strand, 3874435 - 3874487
Alignment:
Q  61 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 114  Q
    ||||||||| ||||||||| ||||||||||| |||| |||||||||||||||||    
T  3874435 ttgctccacacatcaagttgttattggtgtgatttt-tcaacgaattcacaaca 3874487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 28251463 - 28251410
Alignment:
Q  61 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 114  Q
    ||||||||| ||||||||| ||||||||||| |||| ||| |||||||||||||    
T  28251463 ttgctccacacatcaagttgttattggtgtgattttttcatcgaattcacaaca 28251410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 61 - 114
Target Start/End: Original strand, 183257 - 183310
Alignment:
Q  61 ttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaattcacaaca 114  Q
    ||||||||| |||||||||| ||||||||||| |||||||| |||||||||||||    
T  183257 ttgctccacacatcaagtttgttattggtgtg-ttttctcatcgaattcacaaca 183310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 61 - 115
Target Start/End: Complemental strand, 24873091 - 24873038
Alignment:
Q  61 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaacag 115  Q
    ||||||||| ||||||||| ||||||||||| |||| ||| ||||||||||||||    
T  24873091 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcacaacag 24873038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 106; Significance: 8e-53; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 25405633 - 25405745
Alignment:
Q  1 tcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctca 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25405633 tcttgctgtttt-tgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctca 25405731  T
Q  101 acgaattcacaaca 114  Q
    ||||||||||||||    
T  25405732 acgaattcacaaca 25405745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 11 - 114
Target Start/End: Original strand, 25351580 - 25351683
Alignment:
Q  11 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcac 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25351580 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcac 25351679  T
Q  111 aaca 114  Q
    ||||    
T  25351680 aaca 25351683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 7070014 - 7070126
Alignment:
Q  1 tcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||     
T  7070014 tcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtggttttctct 7070112  T
Q  101 acgaattcacaaca 114  Q
    ||||||||||||||    
T  7070113 acgaattcacaaca 7070126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 9 - 114
Target Start/End: Complemental strand, 7464470 - 7464365
Alignment:
Q  9 ttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattc 108  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7464470 ttttttttttggattaattgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattc 7464371  T
Q  109 acaaca 114  Q
    ||||||    
T  7464370 acaaca 7464365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 3319982 - 3319869
Alignment:
Q  1 tcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtgg-ttttctc 99  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  3319982 tcttgctgttttt-gtttggattaattgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtttttctc 3319884  T
Q  100 aacgaattcacaaca 114  Q
    |||||||||||||||    
T  3319883 aacgaattcacaaca 3319869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 7075015 - 7075127
Alignment:
Q  1 tcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||||     
T  7075015 tcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaattttctccacgcatcaag-ttttattggtgtgattttctct 7075113  T
Q  101 acgaattcacaaca 114  Q
    ||||||||||||||    
T  7075114 acgaattcacaaca 7075127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 10 - 114
Target Start/End: Original strand, 30247198 - 30247303
Alignment:
Q  10 tttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaag-tttttattggtgtggttttctcaacgaattc 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  30247198 tttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccgcgcatcaagttttttattggtgtggttttctcaacgaattc 30247297  T
Q  109 acaaca 114  Q
    ||||||    
T  30247298 acaaca 30247303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 10 - 114
Target Start/End: Complemental strand, 3324742 - 3324637
Alignment:
Q  10 tttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtgg-ttttctcaacgaattc 108  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  3324742 tttttgtttgcattaattgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtttttctcaacgaattc 3324643  T
Q  109 acaaca 114  Q
    ||||||    
T  3324642 acaaca 3324637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 10 - 114
Target Start/End: Complemental strand, 15540949 - 15540844
Alignment:
Q  10 tttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtgg-ttttctcaacgaattc 108  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  15540949 tttttgtttggattatttgctatccgcttgttttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtttttctcaacgaattc 15540850  T
Q  109 acaaca 114  Q
    ||||||    
T  15540849 acaaca 15540844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 11 - 114
Target Start/End: Complemental strand, 8378459 - 8378357
Alignment:
Q  11 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcac 110  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  8378459 ttttgtttggattatttgctacccgcttaatttgattacttggtattaatttgctccacgcatcaag-ttttattggtctggttttctcaacgaattcac 8378361  T
Q  111 aaca 114  Q
    ||||    
T  8378360 aaca 8378357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 10 - 114
Target Start/End: Original strand, 2075333 - 2075436
Alignment:
Q  10 tttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaag-tttttattggtgtggttttctcaacgaattc 108  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||    
T  2075333 tttttgtttggattatttgctacccgcttgttttgattacttggtattaatttgctccacgcatcaagttttttattggtgtg--tttctcaacgaattc 2075430  T
Q  109 acaaca 114  Q
    ||||||    
T  2075431 acaaca 2075436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 11 - 114
Target Start/End: Complemental strand, 44143824 - 44143722
Alignment:
Q  11 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcac 110  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||| |    
T  44143824 ttttgtttgaattatttgctacccgcttgatttgattacttggtattaatttgctccatgcatcaag-ttttattggtgtggttttcacaacgaattcgc 44143726  T
Q  111 aaca 114  Q
    ||||    
T  44143725 aaca 44143722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 10 - 112
Target Start/End: Complemental strand, 34546835 - 34546734
Alignment:
Q  10 tttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattca 109  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||    
T  34546835 tttttgtttggattatttgctacccgcttaatttgattacttgatattaatttgttccacgcatcaag-ttttattggtgtggttttctcaacaaattca 34546737  T
Q  110 caa 112  Q
    |||    
T  34546736 caa 34546734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 11 - 114
Target Start/End: Complemental strand, 44016618 - 44016514
Alignment:
Q  11 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaattca 109  Q
    ||||||||  ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  44016618 ttttgttttaattatttgctatccacttgatttgattacttggtattaatttgctccacgcatcaagtttattattggtgtggttttcacaacgaattca 44016519  T
Q  110 caaca 114  Q
    |||||    
T  44016518 caaca 44016514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 11 - 114
Target Start/End: Original strand, 25357274 - 25357378
Alignment:
Q  11 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaattca 109  Q
    |||| ||| ||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||| ||||||||||||||||||||||||||| |    
T  25357274 ttttcttttgattatttgctacccgcttgatttgattacttgatattattttgctccacacatcaagtttgttattggtgtggttttctcaacgaattga 25357373  T
Q  110 caaca 114  Q
    |||||    
T  25357374 caaca 25357378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 11 - 114
Target Start/End: Original strand, 2121128 - 2121229
Alignment:
Q  11 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcac 110  Q
    |||||||||||||| |||||| || |||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||  |||||||||||||||||    
T  2121128 ttttgtttggattaattgctatccacttgatttgattgcttggtattaatttgctccacacatcaagtttatattggtgtg--tttctcaacgaattcac 2121225  T
Q  111 aaca 114  Q
    ||||    
T  2121226 aaca 2121229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 11 - 117
Target Start/End: Original strand, 25410361 - 25410468
Alignment:
Q  11 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaattca 109  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| || |||||||||| ||||| ||||| |||||||||| ||||||    
T  25410361 ttttgtttggattatttgctacccgcttgatttgattacttgatattattttgctcaacacatcaagtttgttattagtgtgattttctcaacaaattca 25410460  T
Q  110 caacagta 117  Q
    ||| ||||    
T  25410461 caatagta 25410468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 11 - 114
Target Start/End: Complemental strand, 44010707 - 44010603
Alignment:
Q  11 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaattca 109  Q
    ||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||| ||||||| ||| |||||||||| ||||||  ||||||||||    
T  44010707 ttttgtttgaattatttgctatccgcttgatttgattacttgatattaatttgctccatgcatcaaatttattattggtgtagttttcagaacgaattca 44010608  T
Q  110 caaca 114  Q
    |||||    
T  44010607 caaca 44010603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 11 - 114
Target Start/End: Original strand, 42006888 - 42006992
Alignment:
Q  11 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaattca 109  Q
    ||||||||| |||||||| ||| |||||||||||||||||| ||||||||||||| |||||||||||||| ||||| || |||||||| | |||||||||    
T  42006888 ttttgtttgaattatttgatactcgcttgatttgattactttgtattaatttgcttcacgcatcaagtttattatttgtatggttttcactacgaattca 42006987  T
Q  110 caaca 114  Q
    |||||    
T  42006988 caaca 42006992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 31 - 112
Target Start/End: Original strand, 21369888 - 21369970
Alignment:
Q  31 acccgcttgatttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaattcacaa 112  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||| ||||| ||||| || |||||||||||    
T  21369888 acccgcttgatttgattacttagtattaatttgctccacgcatcaaatttattattagtgtgcttttcacaccgaattcacaa 21369970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 55 - 114
Target Start/End: Complemental strand, 44512423 - 44512363
Alignment:
Q  55 attaatttgctccacgcatcaagttttt-attggtgtggttttctcaacgaattcacaaca 114  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  44512423 attaatttgctccacgcatcaagttttttattggtgtgtttttctcaacgaattcacaaca 44512363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 61 - 114
Target Start/End: Original strand, 24748981 - 24749035
Alignment:
Q  61 ttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaattcacaaca 114  Q
    ||||||||| |||||||||| |||||||||||||||||||| |||||||||||||    
T  24748981 ttgctccacacatcaagtttgttattggtgtggttttctcatcgaattcacaaca 24749035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 114
Target Start/End: Original strand, 443989 - 444044
Alignment:
Q  61 ttgctccacgcatcaagttt-ttattggtgtg-gttttctcaacgaattcacaaca 114  Q
    ||||||||| |||||||||| ||||||||||| ||||||||| |||||||||||||    
T  443989 ttgctccacacatcaagtttgttattggtgtgagttttctcatcgaattcacaaca 444044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 55 - 114
Target Start/End: Complemental strand, 6067107 - 6067048
Alignment:
Q  55 attaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 114  Q
    ||||||||||||||| |||||||| ||| |||||||| |||| ||| |||| ||||||||    
T  6067107 attaatttgctccacacatcaagtatttgttggtgtgattttttcaccgaaatcacaaca 6067048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 64 - 114
Target Start/End: Complemental strand, 7349167 - 7349117
Alignment:
Q  64 ctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 114  Q
    |||||| ||||||||| ||||||||||| |||| ||| |||||||||||||    
T  7349167 ctccacacatcaagttgttattggtgtgattttttcatcgaattcacaaca 7349117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 64 - 114
Target Start/End: Complemental strand, 7351541 - 7351491
Alignment:
Q  64 ctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 114  Q
    |||||| ||||||||| ||||||||||| |||| ||| |||||||||||||    
T  7351541 ctccacacatcaagttgttattggtgtgattttttcatcgaattcacaaca 7351491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 31434946 - 31434892
Alignment:
Q  61 ttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaattcacaaca 114  Q
    ||||||||| |||||||||| ||||||||||| |||||||| ||||||| |||||    
T  31434946 ttgctccacacatcaagtttgttattggtgtgattttctcatcgaattcgcaaca 31434892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 114
Target Start/End: Original strand, 1606775 - 1606827
Alignment:
Q  61 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 114  Q
    ||||||||| ||||||||| ||||||||||| |||| ||| |||||||||||||    
T  1606775 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcacaaca 1606827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 114
Target Start/End: Original strand, 18345937 - 18345989
Alignment:
Q  61 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 114  Q
    ||||||||| ||||||||| || |||||||| ||||| ||||||||||||||||    
T  18345937 ttgctccacacatcaagttgttgttggtgtg-ttttcacaacgaattcacaaca 18345989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 114
Target Start/End: Original strand, 20297758 - 20297810
Alignment:
Q  61 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 114  Q
    ||||||||| ||||||||| ||||||||||| |||| ||| |||||||||||||    
T  20297758 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcacaaca 20297810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 114
Target Start/End: Original strand, 25542924 - 25542976
Alignment:
Q  61 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 114  Q
    ||||||||| ||||||||| ||||||||||| |||| ||| |||||||||||||    
T  25542924 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcacaaca 25542976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 114
Target Start/End: Original strand, 38394382 - 38394434
Alignment:
Q  61 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 114  Q
    ||||||||| ||||||||| ||||||||||| |||| ||| |||||||||||||    
T  38394382 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcacaaca 38394434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 106; Significance: 8e-53; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 15831366 - 15831478
Alignment:
Q  1 tcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctca 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15831366 tcttgctgtttt-tgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctca 15831464  T
Q  101 acgaattcacaaca 114  Q
    ||||||||||||||    
T  15831465 acgaattcacaaca 15831478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 10 - 114
Target Start/End: Original strand, 18587194 - 18587298
Alignment:
Q  10 tttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattca 109  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18587194 tttttgtttgaattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattca 18587293  T
Q  110 caaca 114  Q
    |||||    
T  18587294 caaca 18587298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 11 - 114
Target Start/End: Original strand, 15312545 - 15312649
Alignment:
Q  11 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaag-tttttattggtgtggttttctcaacgaattca 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  15312545 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttttattggtgtggttttctcaacgaattca 15312644  T
Q  110 caaca 114  Q
    |||||    
T  15312645 caaca 15312649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 11 - 114
Target Start/End: Complemental strand, 16688897 - 16688794
Alignment:
Q  11 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcac 110  Q
    |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16688897 ttttgtttggattatttgctacccgcttgattcgattacttgatattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcac 16688798  T
Q  111 aaca 114  Q
    ||||    
T  16688797 aaca 16688794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 8529502 - 8529600
Alignment:
Q  16 tttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 114  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8529502 tttggactatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 8529600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 11853784 - 11853897
Alignment:
Q  1 tcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaag-tttttattggtgtggttttctc 99  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  11853784 tcttgctgtttt-tgtttggattatttgctacccgcttgatttgattgcttggtattaatttgctccacccatcaagttttttattggtgtggttttctc 11853882  T
Q  100 aacgaattcacaaca 114  Q
    |||||||||||||||    
T  11853883 aacgaattcacaaca 11853897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 16489583 - 16489681
Alignment:
Q  16 tttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 114  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  16489583 tttggattatttgctacccgcttgatttgattacttgatattaatttgctccacacatcaagtttttattggtgtggttttctcaacgaattcacaaca 16489681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 55822478 - 55822591
Alignment:
Q  1 tcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctca 100  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||| | |||||||||    
T  55822478 tcttgctgttttttgtttggattaattgctacccgcctgatttgattacttgatattaatttgctccacacatcaagtttttattggtatagttttctca 55822577  T
Q  101 acgaattcacaaca 114  Q
    ||||||||||||||    
T  55822578 acgaattcacaaca 55822591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 12 - 114
Target Start/End: Original strand, 4885100 - 4885202
Alignment:
Q  12 tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcaca 111  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||    
T  4885100 tttgtttggattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtgatttttacaacgaattcaca 4885199  T
Q  112 aca 114  Q
    |||    
T  4885200 aca 4885202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 10 - 114
Target Start/End: Original strand, 4558534 - 4558639
Alignment:
Q  10 tttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaattc 108  Q
    |||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  4558534 tttttgtttgaattatttgatacccgcttgatttgattacttggtaataatttgctccacgcatcaagtttattattggtgtggttttctcaacgaattc 4558633  T
Q  109 acaaca 114  Q
    ||||||    
T  4558634 acaaca 4558639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 11 - 115
Target Start/End: Original strand, 15317186 - 15317291
Alignment:
Q  11 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaag-tttttattggtgtggttttctcaacgaattca 109  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  15317186 ttttgtttggattatttgctacccgcttgattggattacttggtattcatttgctccatgcatcaagttttttattggtgtggttttctcaacgaattca 15317285  T
Q  110 caacag 115  Q
    ||||||    
T  15317286 caacag 15317291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 13 - 114
Target Start/End: Original strand, 4570320 - 4570420
Alignment:
Q  13 ttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaa 112  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||    
T  4570320 ttgtttgaattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtggttttcaaaacgaattcacaa 4570418  T
Q  113 ca 114  Q
    ||    
T  4570419 ca 4570420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 11 - 114
Target Start/End: Complemental strand, 4556017 - 4555915
Alignment:
Q  11 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcac 110  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||    
T  4556017 ttttgtttggattaattgctacccgcttgatttgattatttggtattaatttgctccacgcatcaa-attttattggtgtggttttctcaacaaattcac 4555919  T
Q  111 aaca 114  Q
    ||||    
T  4555918 aaca 4555915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 11 - 114
Target Start/End: Complemental strand, 7050227 - 7050125
Alignment:
Q  11 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcac 110  Q
    ||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  7050227 ttttgtttgaattatatgctacccgcttgatttgataacttggtattaatttgctccacgcatcaag-ttttattggtgtggttttcacaacgaattcac 7050129  T
Q  111 aaca 114  Q
    ||||    
T  7050128 aaca 7050125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 11 - 114
Target Start/End: Original strand, 47566717 - 47566821
Alignment:
Q  11 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaattca 109  Q
    ||||||||| |||||||| || |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||    
T  47566717 ttttgtttgaattatttgatatccgcttgatttgattacttggtattaatttgctccatgcatcaagtttattattggtgtggttttctcaaagaattca 47566816  T
Q  110 caaca 114  Q
    |||||    
T  47566817 caaca 47566821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 11 - 114
Target Start/End: Original strand, 36771621 - 36771725
Alignment:
Q  11 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaattca 109  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||| |||||||||| |||| ||||||    
T  36771621 ttttgtttgaattatttgctacccgcttgatttgattatttggtattaatttgctcaacgcatcaagtttattattgttgtggttttcacaacaaattca 36771720  T
Q  110 caaca 114  Q
    |||||    
T  36771721 caaca 36771725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 36769704 - 36769803
Alignment:
Q  11 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaattca 109  Q
    ||||||||| |||||||||||||| ||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||    
T  36769704 ttttgtttgaattatttgctacccacttgatttgattacttgatattaatttgcttcacgcatcaagtttattattggtgtggttttcacaacgaattca 36769803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 59 - 114
Target Start/End: Original strand, 31300677 - 31300732
Alignment:
Q  59 atttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 114  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  31300677 atttgcttcacgcatcaagtttttattggtgtggttttctcaacgaattcataaca 31300732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 9 - 114
Target Start/End: Original strand, 16639050 - 16639154
Alignment:
Q  9 ttttttgtttggattat-ttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaatt 107  Q
    ||||||| ||||||||| ||||   ||||||||||||||| |||||| ||| |||||||||| |||||||||||||||||| | |||||  ||| |||||    
T  16639050 ttttttgcttggattatattgccttccgcttgatttgattgcttggtttta-tttgctccacacatcaagtttttattggtat-gtttttgcaaagaatt 16639147  T
Q  108 cacaaca 114  Q
    |||||||    
T  16639148 cacaaca 16639154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 26 - 114
Target Start/End: Original strand, 16631425 - 16631511
Alignment:
Q  26 ttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 114  Q
    |||| ||||||||||||||||| |||||| ||| ||||||||| | ||||||||||||||||| | |||||  |||| |||||||||||    
T  16631425 ttgccacccgcttgatttgatttcttggtttta-tttgctccatggatcaagtttttattggt-ttgtttttgcaacaaattcacaaca 16631511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 10 - 114
Target Start/End: Complemental strand, 25613915 - 25613810
Alignment:
Q  10 tttttgtttggattatttgct-acccgcttgatttgattacttggtattaatttgctccacgcatcaagt-ttttattggtgtggttttctcaacgaatt 107  Q
    |||||||||| |||||||  | ||| |||||||||||||  ||||| ||||||||||| || |||||||| |||||||||||| |||||  |||||||||    
T  25613915 tttttgtttgaattattttttcacctgcttgatttgattgtttggttttaatttgctcaacacatcaagttttttattggtgt-gtttttgcaacgaatt 25613817  T
Q  108 cacaaca 114  Q
    || ||||    
T  25613816 cataaca 25613810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 61 - 115
Target Start/End: Original strand, 40637513 - 40637567
Alignment:
Q  61 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaacag 115  Q
    ||||||||| ||||||||| ||||||||||| | |||||||||||||| ||||||    
T  40637513 ttgctccacacatcaagttgttattggtgtgatattctcaacgaattcgcaacag 40637567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 61 - 114
Target Start/End: Original strand, 47563194 - 47563248
Alignment:
Q  61 ttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaattcacaaca 114  Q
    ||||||||| |||||||||| |||||||||||||||||||| | |||||||||||    
T  47563194 ttgctccacacatcaagtttgttattggtgtggttttctcatcaaattcacaaca 47563248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 18709056 - 18709003
Alignment:
Q  61 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 114  Q
    ||||||||| ||||||||| |||||||||||||||| ||| | |||||||||||    
T  18709056 ttgctccacacatcaagttgttattggtgtggttttttcatcaaattcacaaca 18709003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 11 - 44
Target Start/End: Original strand, 31300648 - 31300681
Alignment:
Q  11 ttttgtttggattatttgctacccgcttgatttg 44  Q
    ||||||||||||||||||||||||||||||||||    
T  31300648 ttttgtttggattatttgctacccgcttgatttg 31300681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 55 - 114
Target Start/End: Complemental strand, 16185746 - 16185686
Alignment:
Q  55 attaatttgctccacgcatcaagt-ttttattggtgtggttttctcaacgaattcacaaca 114  Q
    ||||||||||||||  |||||||| ||||||||||||| | || |||||||||||||||||    
T  16185746 attaatttgctccatacatcaagtattttattggtgtgatcttttcaacgaattcacaaca 16185686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 119
Target Start/End: Original strand, 16455661 - 16455719
Alignment:
Q  61 ttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaattcacaacagtagg 119  Q
    ||||||||| |||||||||| ||||||||||| |||| ||| ||||||||||||||||||    
T  16455661 ttgctccacacatcaagtttgttattggtgtgatttt-tcatcgaattcacaacagtagg 16455719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 61 - 118
Target Start/End: Complemental strand, 2484766 - 2484711
Alignment:
Q  61 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaacagtag 118  Q
    ||||||||| ||||||||| ||||||||||| |||  ||| |||||||||||||||||    
T  2484766 ttgctccacacatcaagttgttattggtgtgattt--tcatcgaattcacaacagtag 2484711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 18311269 - 18311215
Alignment:
Q  61 ttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaattcacaaca 114  Q
    ||||||||| |||||||||| ||||||||||| |||| ||| |||||||||||||    
T  18311269 ttgctccacacatcaagtttattattggtgtgattttttcatcgaattcacaaca 18311215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 18409246 - 18409192
Alignment:
Q  61 ttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaattcacaaca 114  Q
    ||||||||| |||||||||| ||||||||||| |||| ||| |||||||||||||    
T  18409246 ttgctccacacatcaagtttattattggtgtgattttttcatcgaattcacaaca 18409192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 117
Target Start/End: Complemental strand, 17662143 - 17662089
Alignment:
Q  61 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaacagta 117  Q
    ||||||||| ||||||||| ||||||||||| |||  ||||||||||| ||||||||    
T  17662143 ttgctccacacatcaagttgttattggtgtgattt--tcaacgaattcgcaacagta 17662089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 115
Target Start/End: Original strand, 24879427 - 24879472
Alignment:
Q  71 catcaagttt-ttattggtgtggttttctcaacgaattcacaacag 115  Q
    |||||||||| |||||||||||||||| ||| ||||||||||||||    
T  24879427 catcaagtttgttattggtgtggttttttcatcgaattcacaacag 24879472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 115
Target Start/End: Original strand, 24880891 - 24880936
Alignment:
Q  71 catcaagttt-ttattggtgtggttttctcaacgaattcacaacag 115  Q
    |||||||||| |||||||||||||||| ||| ||||||||||||||    
T  24880891 catcaagtttgttattggtgtggttttttcatcgaattcacaacag 24880936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 25358073 - 25358122
Alignment:
Q  64 ctccacgcatcaagt-ttttattggtgtggttttctcaacgaattcacaa 112  Q
    |||||| |||||||| ||||||||||||| |||| |||||||||||||||    
T  25358073 ctccacacatcaagtattttattggtgtgattttttcaacgaattcacaa 25358122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 114
Target Start/End: Original strand, 51015685 - 51015738
Alignment:
Q  61 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 114  Q
    ||||||||| ||||||||| ||||||||||| ||||   |||||||||||||||    
T  51015685 ttgctccacacatcaagttgttattggtgtgttttttcgaacgaattcacaaca 51015738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 115
Target Start/End: Complemental strand, 3824502 - 3824446
Alignment:
Q  61 ttgctccacgcatcaagttt-ttattggtgtggtttt-ctcaacgaattcacaacag 115  Q
    ||||||||| |||||||||| ||||||||||| |||| |||| ||||||||||||||    
T  3824502 ttgctccacacatcaagtttgttattggtgtgatttttctcatcgaattcacaacag 3824446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 38 - 114
Target Start/End: Complemental strand, 4874410 - 4874336
Alignment:
Q  38 tgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 114  Q
    |||||||||| |||||| ||||| ||||||||  ||||||||||  |||||||| ||||  ||||||||||||||||    
T  4874410 tgatttgattgcttggt-ttaatatgctccacatatcaagttttg-ttggtgtgatttttgcaacgaattcacaaca 4874336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 55 - 114
Target Start/End: Original strand, 47078702 - 47078762
Alignment:
Q  55 attaatttgctccacgcatcaagt-ttttattggtgtggttttctcaacgaattcacaaca 114  Q
    |||| |||||||||| ||| |||| ||||||||||||| |||| |||| ||||||||||||    
T  47078702 attattttgctccacacattaagtattttattggtgtgattttttcaaggaattcacaaca 47078762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 106; Significance: 8e-53; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 9521944 - 9522056
Alignment:
Q  1 tcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctca 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9521944 tcttgctgtttt-tgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctca 9522042  T
Q  101 acgaattcacaaca 114  Q
    ||||||||||||||    
T  9522043 acgaattcacaaca 9522056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 10 - 115
Target Start/End: Original strand, 2232821 - 2232927
Alignment:
Q  10 tttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtgg-ttttctcaacgaattc 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  2232821 tttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagtttttattggtgtggtttttctcaacgaattc 2232920  T
Q  109 acaacag 115  Q
    |||||||    
T  2232921 acaacag 2232927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 11 - 114
Target Start/End: Complemental strand, 21353301 - 21353197
Alignment:
Q  11 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaattca 109  Q
    |||||||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  21353301 ttttgtttggattatttgctacccacttgatttaattacttagtattaatttgctccacgcatcaagtttgttattggtgtggttttctcaacgaattca 21353202  T
Q  110 caaca 114  Q
     ||||    
T  21353201 taaca 21353197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 2393247 - 2393133
Alignment:
Q  1 tcttgctgttt--tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttct 98  Q
    |||||||||||  ||||||||||||| |||||| || |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||     
T  2393247 tcttgctgtttactttgtttggattaattgctatccacttgatttgattacttggtattaatttgctccacgcataaag-ttttattggtgtggttttca 2393149  T
Q  99 caacgaattcacaaca 114  Q
    ||||||||||||||||    
T  2393148 caacgaattcacaaca 2393133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 11 - 114
Target Start/End: Original strand, 9526693 - 9526796
Alignment:
Q  11 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtg-gttttctcaacgaattca 109  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||  |||||||||||||||||    
T  9526693 ttttgtttggattatttgctacccgcttgatttgattacttgttattaatttgctccacacatcaag-ttttattggtgtgatttttctcaacgaattca 9526791  T
Q  110 caaca 114  Q
    |||||    
T  9526792 caaca 9526796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 10 - 114
Target Start/End: Original strand, 25134295 - 25134399
Alignment:
Q  10 tttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattca 109  Q
    |||||||||| ||||||| |||||||||||||||||||| ||| ||||||||| || |||||||||| |||||||||||||||||||| |||||||||||    
T  25134295 tttttgtttgaattatttactacccgcttgatttgattatttgatattaatttacttcacgcatcaaatttttattggtgtggttttcacaacgaattca 25134394  T
Q  110 caaca 114  Q
    |||||    
T  25134395 caaca 25134399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 139 - 459
Target Start/End: Original strand, 11115968 - 11116276
Alignment:
Q  139 cttcagcagatttggcaagttcttcagtgattgcagtggatcatttttcaacttagataaggccagctttatctcaacaagatactccagttttggaatc 238  Q
    ||||||||||||||||||||| |||||||| |||| |||||||| ||||| ||| ||||| || ||| |||||| ||||| | |||| || |||||||||    
T  11115968 cttcagcagatttggcaagtttttcagtgactgcattggatcatctttcagcttggataaagctagccttatctaaacaatacactcaagatttggaatc 11116067  T
Q  239 caatcaggcaatgtatctaatctagctttcaattgaagccgctgaagttggggtggagttgagacaaaattcaagttaatggtttcatcctcaccaattg 338  Q
    |||||||||||  |||| | |||||||||||| ||||| ||| |||||| ||||            ||  |||||| |||  ||||||||||  ||||||    
T  11116068 caatcaggcaacttatcaagtctagctttcaaatgaagtcgccgaagtttgggt------------aaggtcaagtcaataatttcatcctctgcaattg 11116155  T
Q  339 tagtgatattaagatcttcaaggtgtttcaattctactacaacaacacttaaggcatctccatgttttcttcttacacgccttaaagctaacttccttaa 438  Q
     ||||||||||||   ||||||||||| ||  ||| |||   || ||||||| ||||   || ||| |||| | |||||||||||| ||||||| |||||    
T  11116156 cagtgatattaagtgattcaaggtgttgcatctcttctattgcagcacttaatgcattcacaagttctcttttcacacgccttaaacctaactttcttaa 11116255  T
Q  439 ctgctttaacattttcatctc 459  Q
    |||| ||||||||||||||||    
T  11116256 ctgccttaacattttcatctc 11116276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 4144641 - 4144543
Alignment:
Q  11 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaag-tttttattggtgtggttttctcaacgaattc 108  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| || ||||||||||||||||| ||||||||||    
T  4144641 ttttgtttgaattatttgctatccgcttgatttgattacttggtattaatttgctccacgtatcaagattattattggtgtggttttcacaacgaattc 4144543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 12 - 114
Target Start/End: Complemental strand, 2401175 - 2401074
Alignment:
Q  12 tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcaca 111  Q
    ||||||||||||| ||| || || ||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||| ||||| |||||||||||||    
T  2401175 tttgtttggattaattgttatccacttgatttgattacttggtattaatttgctctacgcatcaag-ttttatttgtgtgattttcacaacgaattcaca 2401077  T
Q  112 aca 114  Q
    |||    
T  2401076 aca 2401074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 33 - 114
Target Start/End: Complemental strand, 3091039 - 3090960
Alignment:
Q  33 ccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 114  Q
    ||||||||||||||| |||||| ||| |||||||||| ||| || ||||||||||||| |||||  ||||||||||||||||    
T  3091039 ccgcttgatttgatttcttggtttta-tttgctccacacatgaaatttttattggtgt-gtttttgcaacgaattcacaaca 3090960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 72 - 119
Target Start/End: Complemental strand, 2510226 - 2510179
Alignment:
Q  72 atcaagtttttattggtgtggttttctcaacgaattcacaacagtagg 119  Q
    |||||||| ||||||||||| ||||| |||||||||||||||||||||    
T  2510226 atcaagttgttattggtgtgattttcacaacgaattcacaacagtagg 2510179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 61 - 114
Target Start/End: Original strand, 13215465 - 13215518
Alignment:
Q  61 ttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaattcacaaca 114  Q
    ||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||    
T  13215465 ttgctccacacatcaagtttattattggtgtg-ttttctcaacgaattcacaaca 13215518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 25860306 - 25860252
Alignment:
Q  61 ttgctccacgcatcaagtttt-tattggtgtggttttctcaacgaattcacaaca 114  Q
    ||||||||| ||||||||||  |||||||||||||||| ||||||||||||||||    
T  25860306 ttgctccacacatcaagtttgatattggtgtggttttcacaacgaattcacaaca 25860252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 61 - 115
Target Start/End: Complemental strand, 9459329 - 9459276
Alignment:
Q  61 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaacag 115  Q
    ||||||||| ||||||||| ||||||||||| |||| ||| ||||||||||||||    
T  9459329 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcacaacag 9459276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 61 - 115
Target Start/End: Complemental strand, 9463156 - 9463103
Alignment:
Q  61 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaacag 115  Q
    ||||||||| ||||||||| ||||||||||| |||| ||| ||||||||||||||    
T  9463156 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcacaacag 9463103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 64 - 114
Target Start/End: Original strand, 13762225 - 13762275
Alignment:
Q  64 ctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 114  Q
    |||||| ||||||||| ||||||||||| |||||||| ||||||| |||||    
T  13762225 ctccacacatcaagttgttattggtgtgattttctcatcgaattcgcaaca 13762275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 56 - 114
Target Start/End: Complemental strand, 13785164 - 13785107
Alignment:
Q  56 ttaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 114  Q
    |||||||||| ||| ||||||||||||||||||||| |||| | ||| |||||||||||    
T  13785164 ttaatttgcttcacacatcaagtttttattggtgtgatttt-ttaacaaattcacaaca 13785107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 61 - 115
Target Start/End: Original strand, 16231950 - 16232003
Alignment:
Q  61 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaacag 115  Q
    ||||||||| ||||||||| ||||||||||| |||| ||| ||||||||||||||    
T  16231950 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcacaacag 16232003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 28206965 - 28206912
Alignment:
Q  61 ttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaattcacaaca 114  Q
    ||||||||| |||||||||| ||||||||||| |||||||| |||||||||||||    
T  28206965 ttgctccacacatcaagtttgttattggtgtg-ttttctcatcgaattcacaaca 28206912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 50078689 - 50078635
Alignment:
Q  61 ttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaattcacaaca 114  Q
    ||||||||| |||||||||| ||||||||||| |||||||| ||||||| |||||    
T  50078689 ttgctccacacatcaagtttgttattggtgtgattttctcatcgaattcgcaaca 50078635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 114
Target Start/End: Original strand, 16226555 - 16226607
Alignment:
Q  61 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 114  Q
    ||||||||| ||||||||| ||||||||||| |||| ||| |||||||||||||    
T  16226555 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcacaaca 16226607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 114
Target Start/End: Original strand, 23786226 - 23786278
Alignment:
Q  61 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 114  Q
    ||||||||| ||||||||| ||||||||||| |||| ||| |||||||||||||    
T  23786226 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcacaaca 23786278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 117
Target Start/End: Original strand, 39932461 - 39932517
Alignment:
Q  61 ttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaattcacaacagta 117  Q
    ||||||||| |||||||||| ||||||||||| |||| ||| ||||||||||||||||    
T  39932461 ttgctccacacatcaagtttgttattggtgtgatttt-tcatcgaattcacaacagta 39932517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 115
Target Start/End: Complemental strand, 27336837 - 27336781
Alignment:
Q  61 ttgctccacgcatcaagttt-ttattggtgtggtttt-ctcaacgaattcacaacag 115  Q
    ||||||||| |||||||||| |||||| |||| |||| |||||||||||||||||||    
T  27336837 ttgctccacacatcaagtttgttattgatgtgatttttctcaacgaattcacaacag 27336781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0691 (Bit Score: 105; Significance: 3e-52; HSPs: 1)
Name: scaffold0691
Description:

Target: scaffold0691; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 139 - 479
Target Start/End: Original strand, 4356 - 4696
Alignment:
Q  139 cttcagcagatttggcaagttcttcagtgattgcagtggatcatttttcaacttagataaggccagctttatctcaacaagatactccagttttggaatc 238  Q
    ||||| ||||||||||||||| |||||||| |||| |||||| | ||||| ||| |||||  | | | |||||| ||||||| |||| ||||||||||||    
T  4356 cttcaacagatttggcaagtttttcagtgactgcattggatcgtctttcagcttggataaacctaaccttatcttaacaagaaactcgagttttggaatc 4455  T
Q  239 caatcaggcaatgtatctaatctagctttcaattgaagccgctgaagttggggtggagttgagacaaaattcaagttaatggtttcatcctcaccaattg 338  Q
    |||||||| ||  | |||||||| |||||||| ||||| |||||||||| |||||| | ||| ||||| || |||| |||  ||||||||||  | ||||    
T  4456 caatcaggtaacctctctaatctggctttcaaatgaagtcgctgaagtttgggtggggatgacacaaagtttaagtcaataatttcatcctctgctattg 4555  T
Q  339 tagtgatattaagatcttcaaggtgtttcaattctactacaacaacacttaaggcatctccatgttttcttcttacacgccttaaagctaacttccttaa 438  Q
     ||||||||||||   ||||||||||| ||  |||||||   |  ||||||||||||  | ||||| |||||||||| |||||||| |||||||||||||    
T  4556 cagtgatattaagtgattcaaggtgttgcatctctactaatgccgcacttaaggcatggctatgttctcttcttacatgccttaaacctaacttccttaa 4655  T
Q  439 ctgctttaacattttcatctcgttaatgagatcgactcccc 479  Q
    |||| |||  ||||||||||| | ||||||||| |||||||    
T  4656 ctgccttagtattttcatctcttcaatgagatctactcccc 4696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 99; Significance: 1e-48; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 231334 - 231446
Alignment:
Q  1 tcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctca 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  231334 tcttgctgtttt-tgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtggttttctca 231431  T
Q  101 acgaattcacaacag 115  Q
    |||||||||||||||    
T  231432 acgaattcacaacag 231446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 97; Significance: 2e-47; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 10 - 114
Target Start/End: Original strand, 42238484 - 42238588
Alignment:
Q  10 tttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattca 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  42238484 tttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtttttacaacgaattca 42238583  T
Q  110 caaca 114  Q
    |||||    
T  42238584 caaca 42238588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 11 - 114
Target Start/End: Complemental strand, 35385406 - 35385303
Alignment:
Q  11 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcac 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  35385406 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtagttttctcaatgaattcac 35385307  T
Q  111 aaca 114  Q
    ||||    
T  35385306 aaca 35385303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 1240662 - 1240760
Alignment:
Q  16 tttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  1240662 tttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtttcctcaacgaattcacaaca 1240760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 10 - 112
Target Start/End: Original strand, 28786626 - 28786728
Alignment:
Q  10 tttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattca 109  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28786626 tttttgtttgaattatttgctacccgcttgatttgattatttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattca 28786725  T
Q  110 caa 112  Q
    |||    
T  28786726 caa 28786728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 10 - 114
Target Start/End: Original strand, 22673060 - 22673163
Alignment:
Q  10 tttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattca 109  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  22673060 tttttgtttgaattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtggttttcttaacgaattca 22673158  T
Q  110 caaca 114  Q
    |||||    
T  22673159 caaca 22673163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 11 - 114
Target Start/End: Original strand, 1171039 - 1171142
Alignment:
Q  11 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcac 110  Q
    |||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  1171039 ttttgtttggattaattgctacccgcttgttttgattacttgatattaatttgctccacacatcaagtttttattggtgtggttttctcaacgaattcac 1171138  T
Q  111 aaca 114  Q
    ||||    
T  1171139 aaca 1171142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 11 - 114
Target Start/End: Complemental strand, 2297951 - 2297849
Alignment:
Q  11 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcac 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||    
T  2297951 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttactccacgcatcaag-ttttgttggtgtggttttctcaacgaattcac 2297853  T
Q  111 aaca 114  Q
    ||||    
T  2297852 aaca 2297849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 11 - 114
Target Start/End: Original strand, 40222993 - 40223097
Alignment:
Q  11 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttct-caacgaattca 109  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| | |||||||||||    
T  40222993 ttttgtttggattatttgctaccctcttgatttgattacttggtattaatttactccacgcatcaaatttttattggtgtggttttttacaacgaattca 40223092  T
Q  110 caaca 114  Q
    |||||    
T  40223093 caaca 40223097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 25452711 - 25452802
Alignment:
Q  1 tcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagt-ttttattggtgtgg 92  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  25452711 tcttgctgtttt-tgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtattttattggtgtgg 25452802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 25445720 - 25445803
Alignment:
Q  10 tttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagt-ttttattggtgtgg 92  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  25445720 tttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtattttattggtgtgg 25445803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 11 - 114
Target Start/End: Complemental strand, 11962390 - 11962287
Alignment:
Q  11 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaag-tttttattggtgtggttttctcaacgaattca 109  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| || |||||||| |||||||||||||||||||| |||||||||||    
T  11962390 ttttgtttgaattatttgctacccgcttgatttgattacttagtattaatttgctaca-gcatcaagttttttattggtgtggttttcacaacgaattca 11962292  T
Q  110 caaca 114  Q
    |||||    
T  11962291 caaca 11962287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 11 - 114
Target Start/End: Original strand, 20437145 - 20437249
Alignment:
Q  11 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaattca 109  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| || |||||||||| || |||||||| ||||| |||||||||||    
T  20437145 ttttgtttgaattatttgctacccgcttgatttgattacttgatattaatttgctcaacacatcaagtttattgttggtgtgattttcacaacgaattca 20437244  T
Q  110 caaca 114  Q
    |||||    
T  20437245 caaca 20437249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 11 - 114
Target Start/End: Complemental strand, 16093249 - 16093144
Alignment:
Q  11 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgtgg-ttttctcaacgaattc 108  Q
    ||||||||| |||||||| ||  ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||||| ||||||||||    
T  16093249 ttttgtttgaattatttgttattcgcttgatttgattacttggtattaatttactccacgcatcaagtttattattggtgtggtttttcacaacgaattc 16093150  T
Q  109 acaaca 114  Q
    ||||||    
T  16093149 acaaca 16093144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 10 - 108
Target Start/End: Complemental strand, 17841207 - 17841110
Alignment:
Q  10 tttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattc 108  Q
    |||||||||| |||||||||||||||||| ||||||||||| | ||||||||||| |||||||||||| |||||||||||| |||||| ||||||||||    
T  17841207 tttttgtttgaattatttgctacccgcttaatttgattactcgatattaatttgccccacgcatcaag-ttttattggtgtagttttcacaacgaattc 17841110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 31 - 114
Target Start/End: Original strand, 10627611 - 10627695
Alignment:
Q  31 acccgcttgatttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaattcacaaca 114  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||    
T  10627611 acccgcttgatttgattgcttggttttaatttgctccacgcatcaagtttattattggtgtggttttcacaatgaattcacaaca 10627695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 37705680 - 37705626
Alignment:
Q  61 ttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaattcacaaca 114  Q
    ||||||||| |||||||||| |||||||||||||||||||| |||||||||||||    
T  37705680 ttgctccacacatcaagtttgttattggtgtggttttctcatcgaattcacaaca 37705626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 61 - 110
Target Start/End: Complemental strand, 17818388 - 17818338
Alignment:
Q  61 ttgctccacgcatcaagttt-ttattggtgtggttttctcaacgaattcac 110  Q
    ||||||||| |||||||||| |||||||||||||||||||| |||||||||    
T  17818388 ttgctccacacatcaagtttgttattggtgtggttttctcatcgaattcac 17818338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 285 - 367
Target Start/End: Complemental strand, 31681702 - 31681620
Alignment:
Q  285 gttggggtggagttgagacaaaattcaagttaatggtttcatcctcaccaattgtagtgatattaagatcttcaaggtgtttc 367  Q
    |||||||||| | ||||||| | ||||| ||||  |||||||| ||| | |||| |||||||||||||| |||||||||||||    
T  31681702 gttggggtggcgatgagacagagttcaaattaactgtttcatcttcaactattgcagtgatattaagattttcaaggtgtttc 31681620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 10528990 - 10528937
Alignment:
Q  61 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 114  Q
    ||||| ||| ||||||||| ||||||||||| |||||||| |||||||||||||    
T  10528990 ttgcttcacacatcaagttgttattggtgtgattttctcatcgaattcacaaca 10528937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 114
Target Start/End: Original strand, 15552638 - 15552685
Alignment:
Q  67 cacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 114  Q
    ||||||||||||| ||||||||||| |||| ||| |||||||||||||    
T  15552638 cacgcatcaagttgttattggtgtgattttttcatcgaattcacaaca 15552685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 10 - 114
Target Start/End: Complemental strand, 31782413 - 31782311
Alignment:
Q  10 tttttgtttggattat-ttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattc 108  Q
    |||||||||| ||||| |||  ||||||||||||||||| |||||  || || |||||||| ||||||| |||||||||| || ||||  |||| |||||    
T  31782413 tttttgtttgaattatattgtcacccgcttgatttgatttcttgg--tttatatgctccacacatcaag-ttttattggtatgatttttgcaacaaattc 31782317  T
Q  109 acaaca 114  Q
    ||||||    
T  31782316 acaaca 31782311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 3373029 - 3372977
Alignment:
Q  61 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 114  Q
    ||||||||| ||||||||| ||||||||||| |||| ||| |||||||||||||    
T  3373029 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcacaaca 3372977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 87; Significance: 2e-41; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 16546 - 16656
Alignment:
Q  1 tcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctca 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||    
T  16546 tcttgctgtttt-tgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtgattt--tca 16642  T
Q  101 acgaattcacaaca 114  Q
     |||||||||||||    
T  16643 tcgaattcacaaca 16656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 73; Significance: 4e-33; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 34 - 114
Target Start/End: Complemental strand, 16965 - 16885
Alignment:
Q  34 cgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 114  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16965 cgcttgatttgattacttggtattaattttttccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 16885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 61 - 114
Target Start/End: Original strand, 421 - 473
Alignment:
Q  61 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 114  Q
    ||||||||| ||||||||| |||||||||| | |||||||||||||||||||||    
T  421 ttgctccacacatcaagttgttattggtgt-gatttctcaacgaattcacaaca 473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 114
Target Start/End: Original strand, 6594 - 6646
Alignment:
Q  61 ttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 114  Q
    ||||||||| ||||||||| ||||||||||| |||| ||| |||||||||||||    
T  6594 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcacaaca 6646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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