View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF15307_high_3 (Length: 296)
Name: NF15307_high_3
Description: NF15307
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15307_high_3 |
 |  |
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| [»] chr6 (15 HSPs) |
 |  |
|
| [»] chr1 (1 HSPs) |
 |  |
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| [»] chr2 (1 HSPs) |
 |  |
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Alignment Details
Target: chr6 (Bit Score: 181; Significance: 8e-98; HSPs: 15)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 23 - 296
Target Start/End: Original strand, 25074856 - 25075129
Alignment:
| Q |
23 |
gatgacgttgactaactaaagcaattgcaggttttgatcggagagcctagttcgctcggtcatggcagtaaagtcatcattaccactcgagataaacatt |
122 |
Q |
| |
|
|||||| ||||| ||||||||||||||||||||||| ||||||||||||| | |||||||| |||||| | ||||||||||||||||||||| ||||||| |
|
|
| T |
25074856 |
gatgacattgacaaactaaagcaattgcaggttttggtcggagagcctagctggctcggtcgtggcagcagagtcatcattaccactcgagacaaacatt |
25074955 |
T |
 |
| Q |
123 |
tgttatcatctcacgggattnnnnnnntatacgaagcagatggtttaaatgaggagcaagcccttgaattgttaagaacgaaggcttttaaaagtaacaa |
222 |
Q |
| |
|
||||||||||||| |||||| ||||||||||| ||||||||||| |||| ||||| ||||||||||||||||| ||||||||||||||||| || |
|
|
| T |
25074956 |
tgttatcatctcatgggattacaaaaatatacgaagcatatggtttaaataaggaacaagctcttgaattgttaagaacaaaggcttttaaaagtaaaaa |
25075055 |
T |
 |
| Q |
223 |
aaatgattcaagctatgattatattttaaaccgtgcaattaaatatgcttctggccttccactagctttagaag |
296 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
25075056 |
aaatgattcaagctatgattacattttaaaccgtgcaattaaatatgcttctggccttccattagctttagaag |
25075129 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 23 - 296
Target Start/End: Original strand, 26636635 - 26636908
Alignment:
| Q |
23 |
gatgacgttgactaactaaagcaattgcaggttttgatcggagagcctagttcgctcggtcatggcagtaaagtcatcattaccactcgagataaacatt |
122 |
Q |
| |
|
|||||||||||| || |||||||||||||||||||||||||| || || ||| ||| |||| |||||| | ||| ||||| ||||||||||| ||||| | |
|
|
| T |
26636635 |
gatgacgttgacaaaataaagcaattgcaggttttgatcggacaggctggttggcttggtcgtggcagcagagtaatcatcaccactcgagacaaacaat |
26636734 |
T |
 |
| Q |
123 |
tgttatcatctcacgggattnnnnnnntatacgaagcagatggtttaaatgaggagcaagcccttgaattgttaagaacgaaggcttttaaaagtaacaa |
222 |
Q |
| |
|
||||||||||||| |||||| | ||||||||| ||||||||||| |||| ||||| ||||||||||||||||| ||||||||||||||||| || |
|
|
| T |
26636735 |
tgttatcatctcatgggattaaatttttttacgaagcatatggtttaaataaggaacaagctcttgaattgttaagaacaaaggcttttaaaagtaagaa |
26636834 |
T |
 |
| Q |
223 |
aaatgattcaagctatgattatattttaaaccgtgcaattaaatatgcttctggccttccactagctttagaag |
296 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||| |
|
|
| T |
26636835 |
aaatgattcaagctatgattacattttaaaccgtgcagttaaatatgcttctggccttccattagctttagaag |
26636908 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 23 - 296
Target Start/End: Original strand, 26742601 - 26742874
Alignment:
| Q |
23 |
gatgacgttgactaactaaagcaattgcaggttttgatcggagagcctagttcgctcggtcatggcagtaaagtcatcattaccactcgagataaacatt |
122 |
Q |
| |
|
|||||||||||| || |||||||||||||||||||||||||| || || ||| ||| |||| |||||| | ||| ||||| ||||||||||| ||||| | |
|
|
| T |
26742601 |
gatgacgttgacaaaataaagcaattgcaggttttgatcggacaggctggttggcttggtcgtggcagcagagtaatcatcaccactcgagacaaacaat |
26742700 |
T |
 |
| Q |
123 |
tgttatcatctcacgggattnnnnnnntatacgaagcagatggtttaaatgaggagcaagcccttgaattgttaagaacgaaggcttttaaaagtaacaa |
222 |
Q |
| |
|
||||||||||||| |||||| | ||||||||| ||||||||||| |||| ||||| ||||||||||||||||| ||||||||||||||||| || |
|
|
| T |
26742701 |
tgttatcatctcatgggattaaatttttttacgaagcatatggtttaaataaggaacaagctcttgaattgttaagaacaaaggcttttaaaagtaagaa |
26742800 |
T |
 |
| Q |
223 |
aaatgattcaagctatgattatattttaaaccgtgcaattaaatatgcttctggccttccactagctttagaag |
296 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||| |
|
|
| T |
26742801 |
aaatgattcaagctatgattacattttaaaccgtgcagttaaatatgcttctggccttccattagctttagaag |
26742874 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 23 - 296
Target Start/End: Original strand, 26960113 - 26960387
Alignment:
| Q |
23 |
gatgacgttgactaactaaagcaattgcaggttttgatcggagagcctagttcgctcggtcatggcagtaaagtcatcattaccactcgagataaacatt |
122 |
Q |
| |
|
|||||||||||| || |||||||| |||||||||||||||||||| |||||| ||| |||| || ||| | ||| |||||||||||| |||| ||||| | |
|
|
| T |
26960113 |
gatgacgttgacaaaataaagcaagtgcaggttttgatcggagaggctagttggcttggtcgtgacagcagagtaatcattaccactagagacaaacaat |
26960212 |
T |
 |
| Q |
123 |
tgttatcatctcacgggattnnnnnnn-tatacgaagcagatggtttaaatgaggagcaagcccttgaattgttaagaacgaaggcttttaaaagtaaca |
221 |
Q |
| |
|
||||||||||||| |||||| ||||||||||| ||||||||||| |||| ||||| ||||||||||||||||| ||||||||||||||||| | |
|
|
| T |
26960213 |
tgttatcatctcatgggattaaaaaaaatatacgaagcatatggtttaaataaggaacaagctcttgaattgttaagaacaaaggcttttaaaagtaaga |
26960312 |
T |
 |
| Q |
222 |
aaaatgattcaagctatgattatattttaaaccgtgcaattaaatatgcttctggccttccactagctttagaag |
296 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||| |
|
|
| T |
26960313 |
aaaatgattcaagctatgattacattttaaaccgtgcagttaaatatgcttctggccttccattagctttagaag |
26960387 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 23 - 296
Target Start/End: Original strand, 26950732 - 26951005
Alignment:
| Q |
23 |
gatgacgttgactaactaaagcaattgcaggttttgatcggagagcctagttcgctcggtcatggcagtaaagtcatcattaccactcgagataaacatt |
122 |
Q |
| |
|
||||| |||||| || |||||||||||||||||||||| ||||||||| ||| ||| |||| |||||| | |||||||||||||||||| || ||||||| |
|
|
| T |
26950732 |
gatgatgttgacaaaataaagcaattgcaggttttgattggagagcctggttggcttggtcgtggcagcagagtcatcattaccactcgtgacaaacatt |
26950831 |
T |
 |
| Q |
123 |
tgttatcatctcacgggattnnnnnnntatacgaagcagatggtttaaatgaggagcaagcccttgaattgttaagaacgaaggcttttaaaagtaacaa |
222 |
Q |
| |
|
||||||||| ||| |||||| |||| |||||||||||||||||| |||| ||||| |||||||||||||||| || |||||||||||||||||| |
|
|
| T |
26950832 |
tgttatcatgtcatgggattaaaaaaatatatgaagcagatggtttaaataaggaacaagctcttgaattgttaagaatgatggcttttaaaagtaacaa |
26950931 |
T |
 |
| Q |
223 |
aaatgattcaagctatgattatattttaaaccgtgcaattaaatatgcttctggccttccactagctttagaag |
296 |
Q |
| |
|
|||||||||||| |||||| |||||||||||||||| ||||||||||| ||||||||||| |||||||||||| |
|
|
| T |
26950932 |
aaatgattcaaggtatgatagtattttaaaccgtgcagttaaatatgctgctggccttccattagctttagaag |
26951005 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 24 - 296
Target Start/End: Original strand, 26849702 - 26849974
Alignment:
| Q |
24 |
atgacgttgactaactaaagcaattgcaggttttgatcggagagcctagttcgctcggtcatggcagtaaagtcatcattaccactcgagataaacattt |
123 |
Q |
| |
|
|||| |||||| ||||||| || ||| || |||| ||||||||||| ||| ||| |||||||| || | ||||||||||||||||||||| ||| ||| |
|
|
| T |
26849702 |
atgatgttgacaaactaaatcagttggagaatttggtcggagagcctggttggcttggtcatggtagcagagtcatcattaccactcgagacaaatgttt |
26849801 |
T |
 |
| Q |
124 |
gttatcatctcacgggattnnnnnnntatacgaagcagatggtttaaatgaggagcaagcccttgaattgttaagaacgaaggcttttaaaagtaacaaa |
223 |
Q |
| |
|
|||||||||||| || ||| ||||||||||| |||||||||| |||| ||||| ||||||||| ||||||||||| |||||||| |||||||| |
|
|
| T |
26849802 |
gttatcatctcatggaattaaaaaaatatacgaagcatatggtttaaacaaggaacaagctcttgaattggtaagaacgaagacttttaaatgtaacaaa |
26849901 |
T |
 |
| Q |
224 |
aatgattcaagctatgattatattttaaaccgtgcaattaaatatgcttctggccttccactagctttagaag |
296 |
Q |
| |
|
| |||| ||||||||||||| |||||||| |||||| ||||||||||||||||||||||| |||||||||||| |
|
|
| T |
26849902 |
actgatgcaagctatgattacattttaaatcgtgcagttaaatatgcttctggccttccattagctttagaag |
26849974 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 23 - 296
Target Start/End: Original strand, 26812517 - 26812790
Alignment:
| Q |
23 |
gatgacgttgactaactaaagcaattgcaggttttgatcggagagcctagttcgctcggtcatggcagtaaagtcatcattaccactcgagataaacatt |
122 |
Q |
| |
|
||||| |||||| ||| |||||||||| |||||||| | ||||||||| ||| |||||||| ||| |||| ||||||||||||||||||||| | ||||| |
|
|
| T |
26812517 |
gatgatgttgacaaaccaaagcaattgaaggttttggttggagagcctggttggctcggtcctggaagtagagtcatcattaccactcgagacagacatt |
26812616 |
T |
 |
| Q |
123 |
tgttatcatctcacgggattnnnnnnntatacgaagcagatggtttaaatgaggagcaagcccttgaattgttaagaacgaaggcttttaaaagtaacaa |
222 |
Q |
| |
|
|| |||||| ||| ||||| | || || |||||| |||||||| | |||| ||||||||||| | || || ||| ||||||||||||| |
|
|
| T |
26812617 |
tgctatcatgtcatgggataactagaatttatgacttagatggattaaatgacaaagaagctcttgaattgtttataaagatggcatttaaaagtaacat |
26812716 |
T |
 |
| Q |
223 |
aaatgattcaagctatgattatattttaaaccgtgcaattaaatatgcttctggccttccactagctttagaag |
296 |
Q |
| |
|
|| ||||||||| |||||||| |||||||| || ||| | |||||| |||||||||||||| ||||| |||||| |
|
|
| T |
26812717 |
aattgattcaagttatgattacattttaaatcgcgcagtaaaatatacttctggccttccattagctatagaag |
26812790 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 23 - 213
Target Start/End: Original strand, 26975940 - 26976130
Alignment:
| Q |
23 |
gatgacgttgactaactaaagcaattgcaggttttgatcggagagcctagttcgctcggtcatggcagtaaagtcatcattaccactcgagataaacatt |
122 |
Q |
| |
|
|||||| ||||| || |||||||||||||||||||||||||||||||| ||| ||| ||||||||||| | ||||||||||||||||||||| ||||| | |
|
|
| T |
26975940 |
gatgacattgacaaaataaagcaattgcaggttttgatcggagagcctggttggcttggtcatggcagcagagtcatcattaccactcgagacaaacaat |
26976039 |
T |
 |
| Q |
123 |
tgttatcatctcacgggattnnnnnnntatacgaagcagatggtttaaatgaggagcaagcccttgaattgttaagaacgaaggcttttaa |
213 |
Q |
| |
|
|| ||||| ||| ||||| |||||||||||| |||||||||| | || |||| |||||||||||||||| | ||||||||| |
|
|
| T |
26976040 |
tgctatcaggtcatcggattgaaaagatatacgaagcaggtggtttaaataaagaagaagctcttgaattgttaagaaaggtggcttttaa |
26976130 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 21 - 292
Target Start/End: Complemental strand, 27664400 - 27664138
Alignment:
| Q |
21 |
ttgatgacgttgactaactaaagcaattgcaggttttgatcggagagcctagttcgctcggtcatggcagtaaagtcatcattaccactcgagataaaca |
120 |
Q |
| |
|
|||||||||||||| ||| ||| || ||| || ||| ||||||||||| ||| | ||||||| || || | ||||||||||||||||||||| | | | |
|
|
| T |
27664400 |
ttgatgacgttgacaaaccaaatcagttggagaaattggtcggagagcctggttggttcggtcaaggaagcagagtcatcattaccactcgagacagata |
27664301 |
T |
 |
| Q |
121 |
tttgttatcatctcacgggattnnnnnnntatacgaagcagatggtttaaatgaggagcaagcccttgaattgttaagaacgaaggcttttaaaagtaac |
220 |
Q |
| |
|
||||||||||| || ||||| ||||||||||||| |||||||| |||| || | |||||||||||||||| || | ||||||||| |
|
|
| T |
27664300 |
tttgttatcatgccatgggataacaaaaatatacgaagcagacagtttaaataaggaagaatctcttgaattgttaagaaagatgacttttaaaa----- |
27664206 |
T |
 |
| Q |
221 |
aaaaatgattcaagctatgattatattttaaaccgtgcaattaaatatgcttctggccttccactagcttta |
292 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||| || |||||||||||||||||||| |||||||| |
|
|
| T |
27664205 |
----atgattccagctatgattatattttaaaccgtgcagttgaatatgcttctggccttccattagcttta |
27664138 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 41 - 296
Target Start/End: Original strand, 26938036 - 26938291
Alignment:
| Q |
41 |
aagcaattgcaggttttgatcggagagcctagttcgctcggtcatggcagtaaagtcatcattaccactcgagataaacatttgttatcatctcacggga |
140 |
Q |
| |
|
||||| ||||||| | | || ||||| |||| || ||| |||||||| || |||||||| ||||||||||||| ||||||||| |||||| ||| |||| |
|
|
| T |
26938036 |
aagcagttgcaggctataattggagaacctaattggcttggtcatggaagcaaagtcattgttaccactcgagacaaacatttgctatcatgtcatggga |
26938135 |
T |
 |
| Q |
141 |
ttnnnnnnntatacgaagcagatggtttaaatgaggagcaagcccttgaattgttaagaacgaaggcttttaaaagtaacaaaaatgattcaagctatga |
240 |
Q |
| |
|
|| |||| | || |||||| ||||| ||||| |||| |||||| | || || || |||||| ||||| ||||||| ||| |||| || | |
|
|
| T |
26938136 |
ttgaaagaatatatgtagtagatggcttaaaggaggaagaagctcttgaactatttaggtggatggctttcaaaagcaacaaaattgaaccaagttagta |
26938235 |
T |
 |
| Q |
241 |
ttatattttaaaccgtgcaattaaatatgcttctggccttccactagctttagaag |
296 |
Q |
| |
|
| |||| ||||||||||||||||||| ||||||||||||||| |||||||||||| |
|
|
| T |
26938236 |
tgatataataaaccgtgcaattaaatacgcttctggccttccattagctttagaag |
26938291 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 283
Target Start/End: Complemental strand, 28097479 - 28097376
Alignment:
| Q |
180 |
aagcccttgaattgttaagaacgaaggcttttaaaagtaacaaaaatgattcaagctatgattatattttaaaccgtgcaattaaatatgcttctggcct |
279 |
Q |
| |
|
|||||||||||||| | || ||||||||||||| ||| || ||||||||| ||||| | |||||||||||||||||| || |||||| ||||||| |
|
|
| T |
28097479 |
aagcccttgaattgcttaggtggaaggcttttaaagctaaacaagttgattcaagttatgagtgtattttaaaccgtgcaataaattatgctgctggcct |
28097380 |
T |
 |
| Q |
280 |
tcca |
283 |
Q |
| |
|
|||| |
|
|
| T |
28097379 |
tcca |
28097376 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 296
Target Start/End: Original strand, 28140703 - 28140797
Alignment:
| Q |
202 |
gaaggcttttaaaagtaacaaaaatgattcaagctatgattatattttaaaccgtgcaattaaatatgcttctggccttccactagctttagaag |
296 |
Q |
| |
|
|||||| ||||||| ||| ||| ||||||||| ||||| | ||||||||||||||| ||| ||||| |||||||||||| | |||||||||| |
|
|
| T |
28140703 |
gaaggcatttaaaaataataaagttgattcaagttatgagcacattttaaaccgtgcagttacttatgcctctggccttccattggctttagaag |
28140797 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 120
Target Start/End: Original strand, 26862626 - 26862666
Alignment:
| Q |
80 |
ggtcatggcagtaaagtcatcattaccactcgagataaaca |
120 |
Q |
| |
|
|||||||| |||| ||||||||||||||||||||||||||| |
|
|
| T |
26862626 |
ggtcatggaagtagagtcatcattaccactcgagataaaca |
26862666 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 289
Target Start/End: Complemental strand, 27530275 - 27530231
Alignment:
| Q |
245 |
attttaaaccgtgcaattaaatatgcttctggccttccactagct |
289 |
Q |
| |
|
||||||||||||||| ||| |||||||||||||||||| ||||| |
|
|
| T |
27530275 |
attttaaaccgtgcacttacttatgcttctggccttccattagct |
27530231 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 282
Target Start/End: Complemental strand, 29842982 - 29842926
Alignment:
| Q |
226 |
tgattcaagctatgattatattttaaaccgtgcaattaaatatgcttctggccttcc |
282 |
Q |
| |
|
|||||||||||||||| | |||||| |||||||||| ||||||||||||||||| |
|
|
| T |
29842982 |
tgattcaagctatgatgacattttagaccgtgcaatagcttatgcttctggccttcc |
29842926 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 101; Significance: 4e-50; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 23 - 296
Target Start/End: Original strand, 26136877 - 26137150
Alignment:
| Q |
23 |
gatgacgttgactaactaaagcaattgcaggttttgatcggagagcctagttcgctcggtcatggcagtaaagtcatcattaccactcgagataaacatt |
122 |
Q |
| |
|
|||||||||||| | |||||||| |||||||||||| | ||||||||||||| ||| |||| ||| |||| ||||||||||||||| ||||| ||||||| |
|
|
| T |
26136877 |
gatgacgttgacaagctaaagcagttgcaggttttggttggagagcctagttggcttggtcctgggagtagagtcatcattaccacccgagacaaacatt |
26136976 |
T |
 |
| Q |
123 |
tgttatcatctcacgggattnnnnnnntatacgaagcagatggtttaaatgaggagcaagcccttgaattgttaagaacgaaggcttttaaaagtaacaa |
222 |
Q |
| |
|
|| |||||| ||| |||||| |||| |||| ||| |||||| |||| |||| ||||||||||| || || |||||||||||||||| | |
|
|
| T |
26136977 |
tgctatcatgtcatgggattaaaagaatatatgaagtcgatttcttaaataaggatgaagctcttgaattgtttaggtggatggcttttaaaagtaacca |
26137076 |
T |
 |
| Q |
223 |
aaatgattcaagctatgattatattttaaaccgtgcaattaaatatgcttctggccttccactagctttagaag |
296 |
Q |
| |
|
||||| ||||| |||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||| |
|
|
| T |
26137077 |
caatgactcaagttatgattatattttaaacagtgcagttaaatatgcttctggccttccgttagctttagaag |
26137150 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 23 - 296
Target Start/End: Complemental strand, 17992408 - 17992135
Alignment:
| Q |
23 |
gatgacgttgactaactaaagcaattgcaggttttgatcggagagcctagttcgctcggtcatggcagtaaagtcatcattaccactcgagataaacatt |
122 |
Q |
| |
|
|||||| | ||| ||||||||||||||||||||||| | ||||||||| ||| ||| |||| |||||| | ||||||||||||||||||||| ||||||| |
|
|
| T |
17992408 |
gatgacatcgacaaactaaagcaattgcaggttttggttggagagcctggttggcttggtcgtggcagcagagtcatcattaccactcgagacaaacatt |
17992309 |
T |
 |
| Q |
123 |
tgttatcatctcacgggattnnnnnnntatacgaagcagatggtttaaatgaggagcaagcccttgaattgttaagaacgaaggcttttaaaagtaacaa |
222 |
Q |
| |
|
||||| ||| ||| |||||| |||| |||| |||||| ||||||||||| |||| |||||| ||||||| |||||| |||||| | ||| | |
|
|
| T |
17992308 |
tgttaacatgtcatgggattaaaacaatatatgaagtagatggattaaatgaggaagaagctcttgaactgttaaggtggaaggcatttaaaggcaacga |
17992209 |
T |
 |
| Q |
223 |
aaatgattcaagctatgattatattttaaaccgtgcaattaaatatgcttctggccttccactagctttagaag |
296 |
Q |
| |
|
|| |||||| || ||| | |||||||||||||||| | ||||||||||| ||||||| ||| |||||||||||| |
|
|
| T |
17992208 |
aattgattctagttataactatattttaaaccgtgtagttaaatatgctgctggcctcccattagctttagaag |
17992135 |
T |
 |
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