View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15307_low_5 (Length: 300)

Name: NF15307_low_5
Description: NF15307
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15307_low_5
NF15307_low_5
[»] chr3 (59 HSPs)
chr3 (79-287)||(14763819-14764027)
chr3 (79-287)||(23371565-23371773)
chr3 (79-287)||(51300381-51300589)
chr3 (79-287)||(9533046-9533254)
chr3 (93-268)||(24284273-24284448)
chr3 (93-268)||(42109343-42109518)
chr3 (1-84)||(14763659-14763742)
chr3 (1-84)||(23371405-23371488)
chr3 (1-84)||(51300666-51300749)
chr3 (113-266)||(15011784-15011939)
chr3 (1-84)||(10834037-10834119)
chr3 (1-68)||(9533416-9533483)
chr3 (6-84)||(28194796-28194875)
chr3 (140-266)||(1989071-1989198)
chr3 (1-84)||(324339-324422)
chr3 (1-84)||(9577727-9577810)
chr3 (1-84)||(50243004-50243087)
chr3 (1-84)||(52989655-52989738)
chr3 (8-74)||(37427829-37427895)
chr3 (6-84)||(44494910-44494988)
chr3 (1-84)||(12339810-12339893)
chr3 (1-84)||(14179475-14179558)
chr3 (1-84)||(14671027-14671110)
chr3 (1-84)||(14682526-14682609)
chr3 (1-84)||(14966273-14966356)
chr3 (6-84)||(15207041-15207120)
chr3 (6-84)||(15246123-15246202)
chr3 (6-84)||(15265244-15265323)
chr3 (1-84)||(16643276-16643359)
chr3 (1-84)||(16796590-16796673)
chr3 (1-84)||(43550375-43550458)
chr3 (1-84)||(43889559-43889642)
chr3 (6-84)||(54876325-54876403)
chr3 (6-82)||(17691647-17691723)
chr3 (1-84)||(10542365-10542448)
chr3 (9-84)||(12470005-12470080)
chr3 (6-83)||(23318653-23318730)
chr3 (12-84)||(5223408-5223480)
chr3 (6-84)||(316223-316302)
chr3 (1-84)||(15465179-15465262)
chr3 (28-74)||(18700267-18700313)
chr3 (86-174)||(16823641-16823729)
chr3 (1-84)||(21837529-21837611)
chr3 (28-72)||(13919446-13919490)
chr3 (1-84)||(32402892-32402976)
chr3 (45-84)||(38311759-38311798)
chr3 (128-174)||(12153108-12153154)
chr3 (141-201)||(12855742-12855803)
chr3 (105-181)||(15934811-15934887)
chr3 (105-181)||(15954806-15954882)
chr3 (45-81)||(20248741-20248777)
chr3 (8-74)||(8928369-8928436)
chr3 (11-74)||(17046305-17046368)
chr3 (8-74)||(34852596-34852663)
chr3 (1-47)||(29172560-29172606)
chr3 (11-80)||(6805668-6805737)
chr3 (93-174)||(13036827-13036908)
chr3 (128-180)||(13692173-13692225)
chr3 (113-181)||(35984931-35984999)
[»] chr6 (49 HSPs)
chr6 (70-287)||(23837777-23837994)
chr6 (79-287)||(4476644-4476852)
chr6 (1-84)||(4476929-4477012)
chr6 (1-84)||(23838279-23838362)
chr6 (1-84)||(18453287-18453370)
chr6 (1-84)||(14979320-14979403)
chr6 (1-84)||(20556791-20556874)
chr6 (6-83)||(18896253-18896330)
chr6 (1-76)||(15817454-15817529)
chr6 (1-84)||(19773475-19773558)
chr6 (1-84)||(25619655-25619738)
chr6 (1-84)||(25754991-25755074)
chr6 (1-84)||(28103831-28103914)
chr6 (115-287)||(25772812-25772985)
chr6 (6-84)||(20136775-20136852)
chr6 (6-84)||(22196017-22196094)
chr6 (6-84)||(23076837-23076915)
chr6 (7-84)||(15705382-15705459)
chr6 (140-266)||(18137715-18137844)
chr6 (1-74)||(33443160-33443233)
chr6 (140-287)||(21469921-21470071)
chr6 (12-84)||(23414989-23415061)
chr6 (6-82)||(23528044-23528120)
chr6 (1-67)||(25752838-25752904)
chr6 (12-74)||(27556757-27556819)
chr6 (6-84)||(35008255-35008333)
chr6 (8-81)||(16493255-16493327)
chr6 (6-83)||(19362531-19362608)
chr6 (140-287)||(21476422-21476572)
chr6 (1-69)||(22806051-22806119)
chr6 (6-84)||(18177609-18177688)
chr6 (6-84)||(18199353-18199432)
chr6 (6-84)||(18204183-18204262)
chr6 (6-84)||(20224048-20224126)
chr6 (6-84)||(22118032-22118110)
chr6 (11-80)||(15896045-15896114)
chr6 (27-76)||(23539082-23539131)
chr6 (140-194)||(9185720-9185775)
chr6 (8-83)||(23538916-23538991)
chr6 (79-181)||(17414243-17414345)
chr6 (1-83)||(18706411-18706493)
chr6 (132-174)||(24720853-24720895)
chr6 (86-174)||(23105447-23105535)
chr6 (11-74)||(19656075-19656138)
chr6 (138-169)||(23620992-23621023)
chr6 (9-74)||(29416845-29416911)
chr6 (128-181)||(10582716-10582769)
chr6 (132-180)||(14132921-14132969)
chr6 (8-72)||(17105849-17105913)
[»] scaffold0544 (2 HSPs)
scaffold0544 (79-287)||(2538-2746)
scaffold0544 (1-69)||(2425-2493)
[»] scaffold0026 (4 HSPs)
scaffold0026 (79-287)||(110473-110681)
scaffold0026 (1-84)||(110758-110841)
scaffold0026 (113-181)||(25001-25069)
scaffold0026 (132-181)||(35811-35860)
[»] chr7 (77 HSPs)
chr7 (79-287)||(18872146-18872354)
chr7 (79-287)||(147267-147475)
chr7 (79-287)||(14565988-14566196)
chr7 (79-287)||(16008364-16008572)
chr7 (79-285)||(14421553-14421759)
chr7 (79-287)||(18607062-18607270)
chr7 (105-268)||(16575223-16575386)
chr7 (105-268)||(16590276-16590439)
chr7 (1-84)||(16008649-16008732)
chr7 (1-84)||(14566273-14566356)
chr7 (1-84)||(18872431-18872514)
chr7 (1-84)||(11661377-11661460)
chr7 (1-84)||(18607558-18607641)
chr7 (116-266)||(21519037-21519189)
chr7 (1-84)||(42462054-42462137)
chr7 (1-84)||(14422055-14422139)
chr7 (116-266)||(16668327-16668480)
chr7 (1-70)||(16996340-16996409)
chr7 (116-266)||(17642697-17642850)
chr7 (1-81)||(11768851-11768931)
chr7 (224-287)||(10897018-10897081)
chr7 (1-84)||(38519477-38519560)
chr7 (1-84)||(130749-130833)
chr7 (1-84)||(20619485-20619569)
chr7 (1-84)||(46580608-46580691)
chr7 (6-76)||(9033283-9033353)
chr7 (1-69)||(147704-147772)
chr7 (1-84)||(10501356-10501439)
chr7 (1-84)||(13647511-13647594)
chr7 (1-84)||(14273619-14273702)
chr7 (1-84)||(16460698-16460781)
chr7 (1-84)||(16579863-16579946)
chr7 (1-84)||(16585717-16585800)
chr7 (1-84)||(16998697-16998780)
chr7 (1-84)||(20487646-20487729)
chr7 (1-84)||(32301392-32301475)
chr7 (6-76)||(9725597-9725667)
chr7 (9-84)||(11525504-11525580)
chr7 (17-84)||(14157053-14157120)
chr7 (1-84)||(14258555-14258638)
chr7 (6-84)||(9177603-9177681)
chr7 (135-266)||(14038816-14038950)
chr7 (135-266)||(14348846-14348980)
chr7 (12-84)||(1858775-1858847)
chr7 (1-84)||(14929153-14929236)
chr7 (1-84)||(15352619-15352702)
chr7 (79-174)||(16475961-16476056)
chr7 (1-84)||(17017400-17017483)
chr7 (12-74)||(25927195-25927257)
chr7 (135-206)||(15690165-15690237)
chr7 (135-206)||(15697758-15697830)
chr7 (6-84)||(17060361-17060440)
chr7 (6-68)||(1867932-1867994)
chr7 (12-74)||(13918469-13918531)
chr7 (6-68)||(15008436-15008498)
chr7 (86-174)||(15142455-15142543)
chr7 (45-84)||(10896687-10896726)
chr7 (45-84)||(15167307-15167346)
chr7 (8-74)||(16109453-16109520)
chr7 (1-67)||(2529986-2530052)
chr7 (6-68)||(20220127-20220189)
chr7 (12-72)||(16091874-16091934)
chr7 (224-268)||(41782989-41783033)
chr7 (79-174)||(16073794-16073889)
chr7 (1-84)||(48991287-48991368)
chr7 (11-80)||(709262-709331)
chr7 (128-181)||(14169408-14169461)
chr7 (128-181)||(14178882-14178935)
chr7 (39-76)||(14416246-14416283)
chr7 (259-287)||(832932-832960)
chr7 (259-287)||(836975-837003)
chr7 (259-287)||(1198112-1198140)
chr7 (259-287)||(1202155-1202183)
chr7 (11-67)||(1490117-1490173)
chr7 (259-287)||(3289731-3289759)
chr7 (79-174)||(11857527-11857623)
chr7 (259-287)||(13894208-13894236)
[»] chr5 (41 HSPs)
chr5 (79-287)||(22336387-22336595)
chr5 (79-287)||(37598975-37599183)
chr5 (79-287)||(22339925-22340133)
chr5 (79-287)||(28371114-28371322)
chr5 (79-287)||(42960360-42960570)
chr5 (121-287)||(38145485-38145651)
chr5 (103-224)||(19511236-19511357)
chr5 (1-84)||(37598815-37598898)
chr5 (1-84)||(42960647-42960730)
chr5 (9-84)||(28370962-28371037)
chr5 (1-84)||(23469907-23469990)
chr5 (116-256)||(17022647-17022788)
chr5 (1-84)||(25574402-25574485)
chr5 (1-84)||(25575595-25575678)
chr5 (1-57)||(38145436-38145492)
chr5 (1-84)||(25576788-25576871)
chr5 (1-74)||(33895588-33895661)
chr5 (1-84)||(6765933-6766016)
chr5 (1-84)||(30138861-30138944)
chr5 (6-72)||(26732771-26732837)
chr5 (6-72)||(26740584-26740650)
chr5 (8-81)||(21731401-21731473)
chr5 (86-174)||(10035370-10035458)
chr5 (28-84)||(22107394-22107450)
chr5 (6-84)||(21328153-21328231)
chr5 (79-173)||(23444010-23444104)
chr5 (8-81)||(21809521-21809593)
chr5 (45-84)||(22336672-22336711)
chr5 (45-84)||(22340210-22340249)
chr5 (92-174)||(18819161-18819243)
chr5 (45-84)||(19511538-19511577)
chr5 (79-174)||(21901689-21901784)
chr5 (45-84)||(22750286-22750325)
chr5 (92-181)||(10817019-10817108)
chr5 (6-50)||(20572025-20572069)
chr5 (86-174)||(25013810-25013898)
chr5 (79-174)||(21888808-21888903)
chr5 (9-74)||(10816516-10816582)
chr5 (113-174)||(21495118-21495179)
chr5 (94-174)||(15193842-15193921)
chr5 (37-76)||(27869281-27869321)
[»] chr2 (43 HSPs)
chr2 (79-287)||(6261237-6261445)
chr2 (79-287)||(19662513-19662721)
chr2 (79-287)||(9241529-9241737)
chr2 (93-268)||(17634050-17634227)
chr2 (103-224)||(6482558-6482679)
chr2 (103-224)||(6486025-6486146)
chr2 (79-181)||(30644139-30644241)
chr2 (1-84)||(19662353-19662436)
chr2 (1-84)||(6261076-6261160)
chr2 (1-84)||(9242031-9242114)
chr2 (5-84)||(30643983-30644062)
chr2 (113-256)||(23148776-23148921)
chr2 (113-256)||(23560566-23560711)
chr2 (1-84)||(21073425-21073508)
chr2 (2-76)||(21237866-21237940)
chr2 (1-84)||(19201907-19201991)
chr2 (1-84)||(21081669-21081752)
chr2 (1-84)||(22173726-22173809)
chr2 (9-84)||(34137045-34137120)
chr2 (28-84)||(34874172-34874228)
chr2 (1-84)||(27472524-27472607)
chr2 (1-84)||(18546877-18546961)
chr2 (12-84)||(31345221-31345293)
chr2 (1-84)||(18358666-18358749)
chr2 (1-84)||(23069216-23069299)
chr2 (27-72)||(26392498-26392543)
chr2 (28-71)||(9784797-9784840)
chr2 (18-72)||(23287480-23287534)
chr2 (135-195)||(22841192-22841254)
chr2 (79-174)||(22860558-22860653)
chr2 (6-84)||(43947309-43947387)
chr2 (6-68)||(20520130-20520192)
chr2 (79-181)||(20648321-20648423)
chr2 (30-68)||(23004871-23004909)
chr2 (11-80)||(24834804-24834873)
chr2 (45-76)||(6482868-6482899)
chr2 (45-76)||(6486335-6486366)
chr2 (79-174)||(20914161-20914256)
chr2 (138-169)||(22109681-22109712)
chr2 (9-74)||(13101577-13101643)
chr2 (140-180)||(21903409-21903449)
chr2 (114-174)||(25365784-25365844)
chr2 (11-67)||(26903427-26903483)
[»] scaffold0337 (2 HSPs)
scaffold0337 (81-287)||(10033-10239)
scaffold0337 (1-72)||(9654-9725)
[»] chr4 (50 HSPs)
chr4 (79-285)||(30146967-30147173)
chr4 (79-287)||(18212334-18212542)
chr4 (1-84)||(24047232-24047315)
chr4 (1-84)||(18212837-18212920)
chr4 (1-72)||(26050408-26050479)
chr4 (6-84)||(16043117-16043195)
chr4 (3-84)||(26789442-26789524)
chr4 (7-84)||(32306934-32307011)
chr4 (1-81)||(14852808-14852888)
chr4 (1-84)||(15041894-15041978)
chr4 (116-266)||(15075526-15075677)
chr4 (1-84)||(15112446-15112530)
chr4 (1-84)||(630601-630684)
chr4 (1-84)||(10056743-10056826)
chr4 (1-84)||(23803162-23803245)
chr4 (1-84)||(51463765-51463848)
chr4 (6-84)||(13591864-13591942)
chr4 (6-81)||(15791882-15791957)
chr4 (1-84)||(17048067-17048150)
chr4 (1-72)||(17333397-17333468)
chr4 (8-74)||(40907028-40907094)
chr4 (7-84)||(40907176-40907253)
chr4 (6-84)||(14825572-14825651)
chr4 (79-181)||(16228947-16229049)
chr4 (1-84)||(12611125-12611205)
chr4 (105-174)||(18261554-18261623)
chr4 (105-174)||(18271519-18271588)
chr4 (86-174)||(15546854-15546942)
chr4 (1-83)||(53082084-53082166)
chr4 (141-201)||(15318222-15318283)
chr4 (11-80)||(27996021-27996090)
chr4 (79-174)||(53905142-53905238)
chr4 (8-74)||(4831475-4831542)
chr4 (8-74)||(4834770-4834837)
chr4 (138-169)||(9388195-9388226)
chr4 (138-169)||(13878034-13878065)
chr4 (11-74)||(15365185-15365248)
chr4 (224-287)||(27849384-27849450)
chr4 (42-72)||(26045268-26045298)
chr4 (6-60)||(52243131-52243185)
chr4 (132-181)||(4830971-4831020)
chr4 (132-181)||(4834266-4834315)
chr4 (105-174)||(15004896-15004965)
chr4 (128-181)||(18166163-18166216)
chr4 (11-80)||(19738356-19738425)
chr4 (259-287)||(2585120-2585148)
chr4 (259-287)||(13446570-13446598)
chr4 (105-181)||(14821603-14821679)
chr4 (259-287)||(15448329-15448357)
chr4 (259-287)||(27027829-27027857)
[»] chr1 (40 HSPs)
chr1 (79-287)||(16371817-16372025)
chr1 (79-287)||(20438305-20438512)
chr1 (79-282)||(29535102-29535305)
chr1 (86-287)||(13226909-13227110)
chr1 (93-268)||(21986745-21986920)
chr1 (105-268)||(21745457-21745620)
chr1 (93-268)||(21734252-21734428)
chr1 (1-76)||(21043214-21043289)
chr1 (7-84)||(20958213-20958290)
chr1 (1-84)||(20437925-20438009)
chr1 (140-266)||(24475554-24475681)
chr1 (1-84)||(28312619-28312702)
chr1 (1-84)||(22124390-22124473)
chr1 (1-84)||(52940810-52940893)
chr1 (6-83)||(47190707-47190784)
chr1 (1-84)||(13881314-13881397)
chr1 (1-84)||(45574739-45574822)
chr1 (6-72)||(21533811-21533877)
chr1 (28-84)||(14800634-14800690)
chr1 (28-84)||(14809508-14809564)
chr1 (1-76)||(22130763-22130838)
chr1 (1-84)||(27653155-27653238)
chr1 (1-84)||(48603557-48603640)
chr1 (116-201)||(25092151-25092237)
chr1 (1-76)||(635915-635989)
chr1 (45-84)||(16372102-16372141)
chr1 (28-71)||(41781550-41781593)
chr1 (8-76)||(48520623-48520692)
chr1 (79-174)||(23631210-23631305)
chr1 (79-181)||(11140829-11140932)
chr1 (19-74)||(11945571-11945626)
chr1 (18-76)||(20329122-20329181)
chr1 (1-67)||(41049968-41050034)
chr1 (114-174)||(21698351-21698411)
chr1 (138-169)||(20901387-20901418)
chr1 (86-181)||(31927149-31927244)
chr1 (8-74)||(32649825-32649892)
chr1 (95-174)||(41312401-41312480)
chr1 (128-181)||(15316382-15316435)
chr1 (113-177)||(5380879-5380943)
[»] scaffold0462 (1 HSPs)
scaffold0462 (79-268)||(9059-9248)
[»] chr8 (49 HSPs)
chr8 (105-268)||(33089037-33089200)
chr8 (108-268)||(25624519-25624679)
chr8 (103-224)||(44476473-44476594)
chr8 (103-224)||(44479735-44479856)
chr8 (114-287)||(20011982-20012159)
chr8 (1-69)||(27941587-27941655)
chr8 (6-84)||(37515810-37515888)
chr8 (1-84)||(17438149-17438233)
chr8 (1-84)||(17086086-17086169)
chr8 (1-84)||(17460985-17461068)
chr8 (1-84)||(23659512-23659595)
chr8 (1-76)||(23667922-23667997)
chr8 (1-84)||(25484172-25484255)
chr8 (1-84)||(5083086-5083170)
chr8 (1-76)||(18833674-18833750)
chr8 (1-84)||(19808295-19808378)
chr8 (1-84)||(22237952-22238035)
chr8 (1-84)||(23943926-23944009)
chr8 (1-84)||(25363135-25363218)
chr8 (1-74)||(20502034-20502107)
chr8 (12-84)||(14397806-14397878)
chr8 (6-84)||(16799591-16799670)
chr8 (1-76)||(22253098-22253173)
chr8 (79-173)||(22743959-22744053)
chr8 (1-85)||(19154818-19154902)
chr8 (79-174)||(21683516-21683612)
chr8 (79-174)||(21687865-21687961)
chr8 (21-84)||(22995948-22996011)
chr8 (6-84)||(28397654-28397732)
chr8 (28-74)||(21346193-21346239)
chr8 (79-181)||(21690259-21690361)
chr8 (7-81)||(22963351-22963425)
chr8 (6-68)||(37116470-37116532)
chr8 (135-266)||(22521673-22521808)
chr8 (135-195)||(15267426-15267488)
chr8 (45-84)||(44476775-44476814)
chr8 (45-84)||(44480037-44480076)
chr8 (6-68)||(2418811-2418873)
chr8 (12-74)||(20533352-20533414)
chr8 (6-68)||(35026800-35026862)
chr8 (11-80)||(13665189-13665258)
chr8 (11-80)||(13724464-13724533)
chr8 (11-84)||(14103167-14103240)
chr8 (45-81)||(8728620-8728656)
chr8 (86-174)||(20005459-20005547)
chr8 (138-169)||(15003868-15003899)
chr8 (1-68)||(17439438-17439505)
chr8 (37-76)||(18024465-18024504)
chr8 (259-287)||(19882080-19882108)
[»] scaffold0201 (1 HSPs)
scaffold0201 (79-268)||(26456-26645)
[»] scaffold0669 (1 HSPs)
scaffold0669 (113-268)||(1582-1738)
[»] scaffold0480 (1 HSPs)
scaffold0480 (135-268)||(635-770)
[»] scaffold0019 (2 HSPs)
scaffold0019 (1-84)||(133021-133104)
scaffold0019 (12-65)||(29325-29378)
[»] scaffold0331 (2 HSPs)
scaffold0331 (1-84)||(3972-4056)
scaffold0331 (79-181)||(18743-18845)
[»] scaffold0396 (1 HSPs)
scaffold0396 (1-84)||(1999-2082)
[»] scaffold0010 (2 HSPs)
scaffold0010 (1-84)||(752-835)
scaffold0010 (6-60)||(60652-60706)
[»] scaffold1783 (1 HSPs)
scaffold1783 (1-73)||(533-605)
[»] scaffold0371 (1 HSPs)
scaffold0371 (140-266)||(6897-7025)
[»] scaffold0192 (2 HSPs)
scaffold0192 (136-266)||(31667-31800)
scaffold0192 (135-266)||(21000-21134)
[»] scaffold0107 (2 HSPs)
scaffold0107 (1-74)||(36295-36368)
scaffold0107 (1-84)||(10017-10100)
[»] scaffold1539 (1 HSPs)
scaffold1539 (1-84)||(1043-1127)
[»] scaffold0507 (1 HSPs)
scaffold0507 (1-84)||(2603-2687)
[»] scaffold0170 (1 HSPs)
scaffold0170 (1-84)||(3061-3145)
[»] scaffold0111 (2 HSPs)
scaffold0111 (1-84)||(7534-7618)
scaffold0111 (1-84)||(14653-14737)
[»] scaffold0020 (2 HSPs)
scaffold0020 (1-84)||(142686-142770)
scaffold0020 (28-84)||(169709-169765)
[»] scaffold0282 (1 HSPs)
scaffold0282 (1-76)||(18100-18175)
[»] scaffold0485 (2 HSPs)
scaffold0485 (8-76)||(10276-10344)
scaffold0485 (135-266)||(2921-3056)
[»] scaffold0077 (1 HSPs)
scaffold0077 (1-81)||(55617-55697)
[»] scaffold2080 (1 HSPs)
scaffold2080 (9-84)||(701-776)
[»] scaffold0076 (1 HSPs)
scaffold0076 (1-84)||(24530-24613)
[»] scaffold0012 (1 HSPs)
scaffold0012 (6-84)||(221145-221222)
[»] scaffold1336 (1 HSPs)
scaffold1336 (166-266)||(660-761)
[»] scaffold0156 (2 HSPs)
scaffold0156 (11-84)||(15847-15920)
scaffold0156 (128-181)||(25833-25886)
[»] scaffold0169 (1 HSPs)
scaffold0169 (1-81)||(29356-29436)
[»] scaffold0013 (1 HSPs)
scaffold0013 (6-74)||(30447-30515)
[»] scaffold1439 (1 HSPs)
scaffold1439 (1-84)||(288-371)
[»] scaffold0780 (1 HSPs)
scaffold0780 (1-84)||(3260-3343)
[»] scaffold0575 (1 HSPs)
scaffold0575 (1-84)||(6092-6175)
[»] scaffold0436 (1 HSPs)
scaffold0436 (1-84)||(8136-8219)
[»] scaffold0347 (1 HSPs)
scaffold0347 (1-84)||(132-215)
[»] scaffold0293 (2 HSPs)
scaffold0293 (1-84)||(17607-17690)
scaffold0293 (12-85)||(20154-20227)
[»] scaffold0290 (1 HSPs)
scaffold0290 (1-84)||(264-347)
[»] scaffold0125 (1 HSPs)
scaffold0125 (1-84)||(1807-1890)
[»] scaffold0023 (1 HSPs)
scaffold0023 (1-76)||(105193-105268)
[»] scaffold0011 (3 HSPs)
scaffold0011 (1-84)||(126060-126143)
scaffold0011 (135-206)||(21550-21622)
scaffold0011 (79-181)||(154379-154481)
[»] scaffold0004 (3 HSPs)
scaffold0004 (135-275)||(384314-384459)
scaffold0004 (6-81)||(332423-332498)
scaffold0004 (259-287)||(205274-205302)
[»] scaffold0054 (2 HSPs)
scaffold0054 (6-84)||(75766-75844)
scaffold0054 (86-171)||(61852-61936)
[»] scaffold0394 (1 HSPs)
scaffold0394 (11-84)||(12240-12313)
[»] scaffold0253 (1 HSPs)
scaffold0253 (116-266)||(5417-5570)
[»] scaffold0046 (2 HSPs)
scaffold0046 (6-83)||(26016-26093)
scaffold0046 (11-83)||(16861-16933)
[»] scaffold0028 (1 HSPs)
scaffold0028 (136-200)||(92487-92551)
[»] scaffold0096 (1 HSPs)
scaffold0096 (1-84)||(21271-21354)
[»] scaffold0064 (1 HSPs)
scaffold0064 (79-146)||(68148-68215)
[»] scaffold0032 (1 HSPs)
scaffold0032 (1-84)||(67365-67448)
[»] scaffold0018 (1 HSPs)
scaffold0018 (1-84)||(20855-20938)
[»] scaffold1419 (1 HSPs)
scaffold1419 (6-76)||(136-206)
[»] scaffold0750 (1 HSPs)
scaffold0750 (6-72)||(3712-3778)
[»] scaffold0639 (1 HSPs)
scaffold0639 (15-84)||(7435-7505)
[»] scaffold0914 (1 HSPs)
scaffold0914 (1-84)||(1806-1890)
[»] scaffold0117 (2 HSPs)
scaffold0117 (12-84)||(39357-39429)
scaffold0117 (140-180)||(33929-33969)
[»] scaffold0484 (1 HSPs)
scaffold0484 (1-84)||(957-1040)
[»] scaffold0106 (1 HSPs)
scaffold0106 (6-84)||(19584-19663)
[»] scaffold0053 (1 HSPs)
scaffold0053 (79-174)||(46554-46649)
[»] scaffold0047 (1 HSPs)
scaffold0047 (6-84)||(22382-22461)
[»] scaffold0040 (2 HSPs)
scaffold0040 (11-74)||(11260-11323)
scaffold0040 (11-74)||(22360-22423)
[»] scaffold0005 (2 HSPs)
scaffold0005 (6-84)||(14058-14137)
scaffold0005 (105-181)||(18030-18106)
[»] scaffold0051 (1 HSPs)
scaffold0051 (12-74)||(31238-31300)
[»] scaffold0037 (1 HSPs)
scaffold0037 (1-84)||(82254-82341)
[»] scaffold0014 (1 HSPs)
scaffold0014 (14-72)||(206470-206528)
[»] scaffold0708 (1 HSPs)
scaffold0708 (1-74)||(2359-2432)
[»] scaffold0072 (1 HSPs)
scaffold0072 (6-83)||(57922-57999)
[»] scaffold1853 (1 HSPs)
scaffold1853 (79-174)||(633-728)
[»] scaffold0200 (1 HSPs)
scaffold0200 (12-84)||(17678-17750)
[»] scaffold0165 (1 HSPs)
scaffold0165 (113-181)||(18146-18214)
[»] scaffold0069 (2 HSPs)
scaffold0069 (135-206)||(29497-29569)
scaffold0069 (135-201)||(34743-34810)
[»] scaffold0431 (1 HSPs)
scaffold0431 (33-84)||(15030-15081)
[»] scaffold0292 (1 HSPs)
scaffold0292 (1-84)||(6716-6799)
[»] scaffold0006 (2 HSPs)
scaffold0006 (6-68)||(97128-97190)
scaffold0006 (6-68)||(106406-106468)
[»] scaffold0790 (2 HSPs)
scaffold0790 (14-75)||(6149-6210)
scaffold0790 (110-174)||(4722-4786)
[»] scaffold0395 (1 HSPs)
scaffold0395 (116-181)||(7307-7372)
[»] scaffold0001 (1 HSPs)
scaffold0001 (11-80)||(446602-446671)
[»] scaffold0180 (2 HSPs)
scaffold0180 (94-174)||(12681-12761)
scaffold0180 (259-287)||(29260-29288)
[»] scaffold0585 (1 HSPs)
scaffold0585 (135-201)||(8373-8440)
[»] scaffold0167 (1 HSPs)
scaffold0167 (79-174)||(20090-20185)
[»] scaffold0034 (1 HSPs)
scaffold0034 (6-73)||(120124-120191)
[»] scaffold0452 (1 HSPs)
scaffold0452 (1-74)||(13431-13502)
[»] scaffold0205 (1 HSPs)
scaffold0205 (11-84)||(29777-29851)
[»] scaffold0123 (1 HSPs)
scaffold0123 (1-83)||(643-725)
[»] scaffold0039 (1 HSPs)
scaffold0039 (92-174)||(3625-3707)
[»] scaffold0022 (1 HSPs)
scaffold0022 (6-68)||(128907-128969)
[»] scaffold0561 (1 HSPs)
scaffold0561 (11-84)||(10578-10651)
[»] scaffold0356 (1 HSPs)
scaffold0356 (11-84)||(604-677)
[»] scaffold0261 (2 HSPs)
scaffold0261 (105-174)||(10511-10580)
scaffold0261 (105-174)||(18690-18759)
[»] scaffold0139 (1 HSPs)
scaffold0139 (132-173)||(2803-2844)
[»] scaffold0081 (1 HSPs)
scaffold0081 (1-74)||(4629-4702)
[»] scaffold1098 (1 HSPs)
scaffold1098 (113-181)||(2185-2253)
[»] scaffold0091 (2 HSPs)
scaffold0091 (86-174)||(22581-22669)
scaffold0091 (86-174)||(26778-26866)
[»] scaffold0007 (1 HSPs)
scaffold0007 (105-181)||(207571-207647)
[»] scaffold0860 (1 HSPs)
scaffold0860 (138-169)||(522-553)
[»] scaffold0609 (1 HSPs)
scaffold0609 (138-169)||(4726-4757)
[»] scaffold0556 (1 HSPs)
scaffold0556 (138-169)||(9910-9941)
[»] scaffold0420 (1 HSPs)
scaffold0420 (1-68)||(6215-6282)
[»] scaffold0021 (2 HSPs)
scaffold0021 (8-74)||(146299-146366)
scaffold0021 (132-181)||(146812-146861)
[»] scaffold1351 (1 HSPs)
scaffold1351 (6-83)||(112-189)
[»] scaffold0751 (1 HSPs)
scaffold0751 (128-181)||(650-703)
[»] scaffold0278 (1 HSPs)
scaffold0278 (28-76)||(7946-7995)
[»] scaffold0162 (1 HSPs)
scaffold0162 (11-80)||(24839-24908)
[»] scaffold0138 (1 HSPs)
scaffold0138 (7-68)||(18176-18237)
[»] scaffold0045 (1 HSPs)
scaffold0045 (11-80)||(46788-46857)
[»] scaffold0008 (1 HSPs)
scaffold0008 (113-174)||(124791-124852)
[»] scaffold0434 (1 HSPs)
scaffold0434 (93-181)||(1195-1282)
[»] scaffold0338 (1 HSPs)
scaffold0338 (259-287)||(3873-3901)
[»] scaffold0326 (1 HSPs)
scaffold0326 (86-174)||(5226-5313)
[»] scaffold0178 (1 HSPs)
scaffold0178 (114-174)||(25687-25747)
[»] scaffold0070 (1 HSPs)
scaffold0070 (259-287)||(8169-8197)
[»] scaffold0049 (1 HSPs)
scaffold0049 (133-181)||(53513-53561)
[»] scaffold0003 (1 HSPs)
scaffold0003 (113-181)||(81030-81098)


Alignment Details
Target: chr3 (Bit Score: 201; Significance: 1e-110; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 79 - 287
Target Start/End: Original strand, 14763819 - 14764027
Alignment:
Q  79 tgattagttgtgcattttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctga 178  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14763819 tgattaattgtgtattttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctga 14763918  T
Q  179 attcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatgttgttga 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14763919 attcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatgttgttga 14764018  T
Q  279 gttgtatgt 287  Q
    |||||||||    
T  14764019 gttgtatgt 14764027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 79 - 287
Target Start/End: Original strand, 23371565 - 23371773
Alignment:
Q  79 tgattagttgtgcattttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctga 178  Q
    |||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23371565 tgattaattgtgtattttctggaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctga 23371664  T
Q  179 attcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatgttgttga 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23371665 attcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatgttgttga 23371764  T
Q  279 gttgtatgt 287  Q
    |||||||||    
T  23371765 gttgtatgt 23371773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 79 - 287
Target Start/End: Complemental strand, 51300589 - 51300381
Alignment:
Q  79 tgattagttgtgcattttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctga 178  Q
    |||||| ||||| |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51300589 tgattaattgtgtattttctggaatcgttggatcaattatgatgaattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctga 51300490  T
Q  179 attcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatgttgttga 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51300489 attcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatgttgttga 51300390  T
Q  279 gttgtatgt 287  Q
    |||||||||    
T  51300389 gttgtatgt 51300381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 79 - 287
Target Start/End: Complemental strand, 9533254 - 9533046
Alignment:
Q  79 tgattagttgtgcattttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctga 178  Q
    |||||| ||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  9533254 tgattaattgtgtattttctggaatcgttggatcaattatgatggattgttgttgactgtgatgtatatttatatttaaataaattatacatgttgctaa 9533155  T
Q  179 attcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatgttgttga 278  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9533154 attctttttaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatgttgttga 9533055  T
Q  279 gttgtatgt 287  Q
    |||||||||    
T  9533054 gttgtatgt 9533046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 93 - 268
Target Start/End: Original strand, 24284273 - 24284448
Alignment:
Q  93 ttttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaattcttttcaaagg 192  Q
    ||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  24284273 ttttctggaattgttggattaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgttgaattcttttcaaagg 24284372  T
Q  193 ttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttg 268  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24284373 ttggagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttg 24284448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 93 - 268
Target Start/End: Complemental strand, 42109518 - 42109343
Alignment:
Q  93 ttttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaattcttttcaaagg 192  Q
    ||||||| ||| ||||||| ||||||||||  |||||| || |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  42109518 ttttctggaattgttggattaattatgatgagttattgctggctgtaatgtatatttatatttaaataaattatacatgttgttgaattcttttcaaagg 42109419  T
Q  193 ttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttg 268  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  42109418 ttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcatttaagagtagtggttgtcgttg 42109343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 14763659 - 14763742
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14763659 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 14763742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 23371405 - 23371488
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23371405 atatgatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 23371488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 51300749 - 51300666
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51300749 atatgatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 51300666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 113 - 266
Target Start/End: Original strand, 15011784 - 15011939
Alignment:
Q  113 aattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaa-ttcttttcaaaggttgaagtattattaattgg 211  Q
    |||||||||| ||  ||| || |||| ||||||||||||| ||||||||||||||||||||| |||| ||| |||||||| ||||||||| ||||||||     
T  15011784 aattatgatgaatcgttgatggctgttatgtatatttatacttaaataaattatacatgttgttgaatttcatttcaaagattgaagtatcattaattga 15011883  T
Q  212 attgtcgaggtg-aagtcatatttacatatatgcattgatgagtagtggttgtcgt 266  Q
    ||||| |||||| |||||||||| | |||||||||||| |||||||||||||||||    
T  15011884 attgttgaggtgtaagtcatattcatatatatgcattgttgagtagtggttgtcgt 15011939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 10834037 - 10834119
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  10834037 atatgatttgatgttgttagtaatgagatatatt-gtatatgcattatgtggattatataagatgtttaagttgatgttgatta 10834119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 9533483 - 9533416
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgttt 68  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9533483 atatgatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgttt 9533416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 84
Target Start/End: Complemental strand, 28194875 - 28194796
Alignment:
Q  6 atttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgat-attgatta 84  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||    
T  28194875 atttgatgttgttagtaatgtgatatatttgtatatgcattatgtgaattatataaaatgtttaagttgatgattgatta 28194796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 140 - 266
Target Start/End: Original strand, 1989071 - 1989198
Alignment:
Q  140 atgtatatttatatttaaataaattatacatgttgctgaattct-tttcaaaggttgaagtattattaattggattgtcgaggtg-aagtcatatttaca 237  Q
    ||||||||||||||| || ||||||||  |||||| |||||||  |||||||| ||||||||| |||||||| ||||| |||||| |||||||||| |||    
T  1989071 atgtatatttatatt-aactaaattatgtatgttgttgaattccatttcaaagattgaagtatcattaattgaattgttgaggtgtaagtcatattcaca 1989169  T
Q  238 tatatgcattgatgagtagtggttgtcgt 266  Q
    ||||||||||| ||||||||| |||||||    
T  1989170 tatatgcattgttgagtagtgattgtcgt 1989198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 324422 - 324339
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||| |||||| ||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  324422 atatgatttaatgttgatagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgatta 324339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 9577810 - 9577727
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||||||||||||||||||| || |||||||||||||||||||||| ||||||||||||||||||| || | |||||||    
T  9577810 atatgatttgatgttgttagtaatgtgacatatttgtatatgcattatgtgaattatataagatgtttaaggtgttgttgatta 9577727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 50243087 - 50243004
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||| |||||| ||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  50243087 atatgatttaatgttgatagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgatta 50243004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 52989655 - 52989738
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||| |||||| ||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  52989655 atatgatttaatgttgatagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgatta 52989738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 74
Target Start/End: Complemental strand, 37427895 - 37427829
Alignment:
Q  8 ttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttg 74  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||||| |||||||||||||    
T  37427895 ttgatgttgttagtaatgtgatatagttgtatatgcattatgtggattatatatgatgtttaagttg 37427829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 84
Target Start/End: Complemental strand, 44494988 - 44494910
Alignment:
Q  6 atttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||||| ||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  44494988 atttaatgttgatagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgatta 44494910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 12339893 - 12339810
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| ||||||||||| | ||||||  |||||||||||||||||||||||| |||||||||||||||||||||| | |||||||    
T  12339893 atatgatttgatgttgatggtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgttgttgatta 12339810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 14179558 - 14179475
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| ||||||||||| | ||||||  |||||||||||||||||||||||| |||||||||||||||||||||| | |||||||    
T  14179558 atatgatttgatgttgatggtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgttgttgatta 14179475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 14671110 - 14671027
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| ||||||||||| | ||||||  |||||||||||||||||||||||| |||||||||||||||||||||| | |||||||    
T  14671110 atatgatttgatgttgatggtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgttgttgatta 14671027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 14682609 - 14682526
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| ||||||||||| | ||||||  |||||||||||||||||||||||| |||||||||||||||||||||| | |||||||    
T  14682609 atatgatttgatgttgatggtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgttgttgatta 14682526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 14966356 - 14966273
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||| |||||| ||||||||  |||||||||||||||||||||||| |||||||||||||||||| ||||| |||||||    
T  14966356 atatgatttaatgttgatagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaaattgatgttgatta 14966273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 6 - 84
Target Start/End: Complemental strand, 15207120 - 15207041
Alignment:
Q  6 atttgatgttgttagtaatgagatatatttgtatatgcattatgtggatt-atataagatgtttaagttgatattgatta 84  Q
    |||||||||||||| ||||| |||||| |||||||||||||||||| ||| ||||||||||||||||||||| |||||||    
T  15207120 atttgatgttgttattaatgtgatataattgtatatgcattatgtgaattaatataagatgtttaagttgatgttgatta 15207041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 6 - 84
Target Start/End: Complemental strand, 15246202 - 15246123
Alignment:
Q  6 atttgatgttgttagtaatgagatatatttgtatatgcattatgtggatt-atataagatgtttaagttgatattgatta 84  Q
    |||||||||||||| ||||| |||||| |||||||||||||||||| ||| ||||||||||||||||||||| |||||||    
T  15246202 atttgatgttgttattaatgtgatataattgtatatgcattatgtgaattaatataagatgtttaagttgatgttgatta 15246123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 6 - 84
Target Start/End: Complemental strand, 15265323 - 15265244
Alignment:
Q  6 atttgatgttgttagtaatgagatatatttgtatatgcattatgtggatt-atataagatgtttaagttgatattgatta 84  Q
    |||||||||||||| ||||| |||||| |||||||||||||||||| ||| ||||||||||||||||||||| |||||||    
T  15265323 atttgatgttgttattaatgtgatataattgtatatgcattatgtgaattaatataagatgtttaagttgatgttgatta 15265244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 16643359 - 16643276
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||| |||||| ||||||||  |||||||||||||||||||||||| |||||||| ||||||||||||||| |||||||    
T  16643359 atatgatttaatgttgatagtaatgtaatatatttgtatatgcattatgtgaattatataggatgtttaagttgatgttgatta 16643276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 16796673 - 16796590
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| ||||||||||| | ||||||  |||||||||||||||||||||||| |||||||||||||||||||||| | |||||||    
T  16796673 atatgatttgatgttgatggtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgttgttgatta 16796590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 43550375 - 43550458
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||| |||||| ||||||||  |||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||    
T  43550375 atatgatttaatgttgatagtaatgtaatatatttgtatatgcattatgtgaattatataagatgttaaagttgatgttgatta 43550458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 43889559 - 43889642
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| ||||||||||| | ||||||  |||||||||||||||||||||||| |||||||||||||||||||||| | |||||||    
T  43889559 atatgatttgatgttgatggtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgttgttgatta 43889642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 6 - 84
Target Start/End: Original strand, 54876325 - 54876403
Alignment:
Q  6 atttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||||| ||||||||  ||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||    
T  54876325 atttaatgttgatagtaatgtaatatatttgtatatgcattttgtgaattatataagatgtttaagttgatgttgatta 54876403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 6 - 82
Target Start/End: Original strand, 17691647 - 17691723
Alignment:
Q  6 atttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgat 82  Q
    |||| |||||| ||||||||  ||||||||||||||||||| |||| |||||||||||||||||||||||| |||||    
T  17691647 atttaatgttgatagtaatgtaatatatttgtatatgcattttgtgaattatataagatgtttaagttgatgttgat 17691723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 10542365 - 10542448
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| ||||||||| | | ||||||  |||||||||||||||||||||||| |||||||||||||||||||||| | |||||||    
T  10542365 atatgatttgatgtcgatggtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgttgttgatta 10542448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 84
Target Start/End: Complemental strand, 12470080 - 12470005
Alignment:
Q  9 tgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||||||| | ||||||  |||||||||||||||||||||||| |||||||||||||||||||||| | |||||||    
T  12470080 tgatgttgatggtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgttgttgatta 12470005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 23318653 - 23318730
Alignment:
Q  6 atttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatt 83  Q
    |||| ||||||||||||||| |||||| |||||||||||||||||| |||||||||| |||| |||||| | ||||||    
T  23318653 atttaatgttgttagtaatgtgatataattgtatatgcattatgtgaattatataagttgttcaagttgttgttgatt 23318730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 5223480 - 5223408
Alignment:
Q  12 tgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    ||||| ||||||||  |||||||||||||||||||||||| |||||||| ||||||||||||| | |||||||    
T  5223480 tgttgatagtaatgtaatatatttgtatatgcattatgtgaattatatatgatgtttaagttgttgttgatta 5223408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 6 - 84
Target Start/End: Complemental strand, 316302 - 316223
Alignment:
Q  6 atttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatg-tttaagttgatattgatta 84  Q
    |||| |||||| ||||||||  |||||||||||||||||||||||| ||||||| ||||| ||||||||||| |||||||    
T  316302 atttaatgttgatagtaatgtaatatatttgtatatgcattatgtgaattatatgagatgttttaagttgatgttgatta 316223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 15465262 - 15465179
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||||||||  ||||| ||||||||  |||||||||||||||||||||||| |||||||| |||| |||||||| | |||||||    
T  15465262 atataatttagtgttgatagtaatgtaatatatttgtatatgcattatgtgaattatatatgatgcttaagttgttgttgatta 15465179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 18700267 - 18700313
Alignment:
Q  28 atatatttgtatatgcattatgtggattatataagatgtttaagttg 74  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||    
T  18700267 atatatttgtatatgcattatgtgaattatataagatgtttaagttg 18700313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 86 - 174
Target Start/End: Original strand, 16823641 - 16823729
Alignment:
Q  86 ttgtgcattttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttg 174  Q
    |||||||||||||| ||| ||||||| ||||||| |   |||||| |||||||||||||| |||| |||||| ||||| ||||||||||    
T  16823641 ttgtgcattttctggaattgttggattaattatgctcacttattgatgactgtgatgtatgtttacatttaattaaatcatacatgttg 16823729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 21837611 - 21837529
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||| ||| || ||||||||  ||| ||||||||||||||| |||| |||||||||||||||||||||||| |||||||    
T  21837611 atatgatttaatgatgatagtaatgtaataaatttgtatatgcatt-tgtgaattatataagatgtttaagttgatgttgatta 21837529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 13919490 - 13919446
Alignment:
Q  28 atatatttgtatatgcattatgtggattatataagatgtttaagt 72  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||    
T  13919490 atatatttgtatatgcattatgtgaattatttaagatgtttaagt 13919446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 32402892 - 32402976
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgttt-aagttgatattgatta 84  Q
    |||| ||||| |||||  ||||||| |||||| || ||||||||||||||| ||||| |||||||||| |||||| |||||||||    
T  32402892 atatgatttgttgttgcgagtaatgtgatatagttttatatgcattatgtgaattatctaagatgtttaaagttgctattgatta 32402976  T

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Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 84
Target Start/End: Original strand, 38311759 - 38311798
Alignment:
Q  45 ttatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  38311759 ttatgtggattatataagatgtttaagttgatgttgatta 38311798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 174
Target Start/End: Complemental strand, 12153154 - 12153108
Alignment:
Q  128 ttgttgactgtgatgtatatttatatttaaataaattatacatgttg 174  Q
    |||||||||||||||||| |||||||||||||| || ||||||||||    
T  12153154 ttgttgactgtgatgtatgtttatatttaaatagatcatacatgttg 12153108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 201
Target Start/End: Original strand, 12855742 - 12855803
Alignment:
Q  141 tgtatatttatatttaaataaattatacatgttgctgaa-ttcttttcaaaggttgaagtat 201  Q
    |||||||||||||||||||||| |||||| |||| |||| ||| ||||||||||||| ||||    
T  12855742 tgtatatttatatttaaataaactatacaagttgttgaatttcatttcaaaggttgatgtat 12855803  T

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Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 181
Target Start/End: Original strand, 15934811 - 15934887
Alignment:
Q  105 gttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaatt 181  Q
    ||||||| | ||||||||  || ||| |||||||||||||| ||||||||| | ||||| |||||||||| ||||||    
T  15934811 gttggattacttatgatgattttttgatgactgtgatgtatgtttatatttgattaaatcatacatgttgttgaatt 15934887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 181
Target Start/End: Original strand, 15954806 - 15954882
Alignment:
Q  105 gttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaatt 181  Q
    ||||||| | ||||||||  || ||| |||||||||||||| ||||||||| | ||||| |||||||||| ||||||    
T  15954806 gttggattacttatgatgatttgttgatgactgtgatgtatgtttatatttgattaaatcatacatgttgttgaatt 15954882  T

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Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 20248741 - 20248777
Alignment:
Q  45 ttatgtggattatataagatgtttaagttgatattga 81  Q
    |||||||||||||||||||||||||||||||| ||||    
T  20248741 ttatgtggattatataagatgtttaagttgatgttga 20248777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 74
Target Start/End: Original strand, 8928369 - 8928436
Alignment:
Q  8 ttgatgttgttagtaatgagatatatttgtatatgcattatgtgg-attatataagatgtttaagttg 74  Q
    |||||||||||| | ||| | |||||||| | ||||||||||||| |||||||| |||||||||||||    
T  8928369 ttgatgttgttaatgatgtggtatatttgcaaatgcattatgtggaattatatatgatgtttaagttg 8928436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 17046368 - 17046305
Alignment:
Q  11 atgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttg 74  Q
    |||||||||||| || |||||| || || |||||||||||||| |||||| |||||| ||||||    
T  17046368 atgttgttagtattgtgatatacttatacatgcattatgtggaatatatatgatgttgaagttg 17046305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 74
Target Start/End: Original strand, 34852596 - 34852663
Alignment:
Q  8 ttgatgttgttagtaatgagatatatttgtatatgcattatgtgg-attatataagatgtttaagttg 74  Q
    |||||||||||| | ||| | |||||||| | ||||||||||||| |||||||| |||||||||||||    
T  34852596 ttgatgttgttaatgatgtggtatatttgcaaatgcattatgtggaattatatatgatgtttaagttg 34852663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 29172560 - 29172606
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcatta 47  Q
    |||||||||||||||| ||||| || |||||| ||||||||||||||    
T  29172560 atataatttgatgttgatagtattgtgatataattgtatatgcatta 29172606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 6805668 - 6805737
Alignment:
Q  11 atgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattg 80  Q
    ||||||||||| ||| |||||| || | ||||||||||||||| ||| || |||||| |||||| |||||    
T  6805668 atgttgttagtgatgtgatatagttatttatgcattatgtggaatatgtatgatgttgaagttgttattg 6805737  T

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Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 174
Target Start/End: Original strand, 13036827 - 13036908
Alignment:
Q  93 ttttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttg 174  Q
    ||||||||||| ||||||| || |||||||  || ||| ||||| | |||||| ||||||||||| |||||  |||||||||    
T  13036827 ttttctgaaattgttggattaactatgatgatttgttgatgactataatgtatgtttatatttaattaaatcgtacatgttg 13036908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 128 - 180
Target Start/End: Complemental strand, 13692225 - 13692173
Alignment:
Q  128 ttgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaat 180  Q
    ||||||||||||||||||  || ||||||| ||||| |||||||||| |||||    
T  13692225 ttgttgactgtgatgtatgcttttatttaattaaatcatacatgttgttgaat 13692173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 181
Target Start/End: Complemental strand, 35984999 - 35984931
Alignment:
Q  113 aattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaatt 181  Q
    ||||||||||  || ||| ||||||||||||||  |||||| ||||||||| |||||||| | ||||||    
T  35984999 aattatgatgatttgttgatgactgtgatgtatgcttatatctaaataaatcatacatgtcgttgaatt 35984931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 198; Significance: 1e-108; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 70 - 287
Target Start/End: Complemental strand, 23837994 - 23837777
Alignment:
Q  70 agttgatattgattagttgtgcattttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattataca 169  Q
    |||||||  |||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23837994 agttgattatgattaattgtgtattttctggaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattataca 23837895  T
Q  170 tgttgctgaattcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttga 269  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23837894 tgttgctgaattcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttga 23837795  T
Q  270 tgttgttgagttgtatgt 287  Q
    ||||||||||||||||||    
T  23837794 tgttgttgagttgtatgt 23837777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 79 - 287
Target Start/End: Complemental strand, 4476852 - 4476644
Alignment:
Q  79 tgattagttgtgcattttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctga 178  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4476852 tgattaattgtgtattttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctga 4476753  T
Q  179 attcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatgttgttga 278  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  4476752 attcttttcaaaggttgaagtattattaattgaattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatgttgctga 4476653  T
Q  279 gttgtatgt 287  Q
    |||||||||    
T  4476652 gttgtatgt 4476644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 4477012 - 4476929
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4477012 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 4476929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 23838362 - 23838279
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  23838362 atatgatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatgttgatta 23838279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 18453370 - 18453287
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||||||||||||||||||| |||||| ||||||||||||| |||| |||||||||||||||||||||||| |||||||    
T  18453370 atatgatttgatgttgttagtaatgtgatatagttgtatatgcattttgtgaattatataagatgtttaagttgatgttgatta 18453287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 14979320 - 14979403
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||| |||||| ||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  14979320 atatgatttaatgttgatagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgatta 14979403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 20556791 - 20556874
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||| |||||| ||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  20556791 atatgatttaatgttgatagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgatta 20556874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 18896253 - 18896330
Alignment:
Q  6 atttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatt 83  Q
    |||| ||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||||| | ||||||    
T  18896253 atttaatgttgttagtaatgggatataattgtatatgcattatgtgaattatataagatgtttaagttgttgttgatt 18896330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 15817454 - 15817529
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgat 76  Q
    |||| |||||||||||||||||||| | |||||||| |||||||||||||| |||||||| |||||||||||||||    
T  15817454 atatgatttgatgttgttagtaatgtggtatatttgaatatgcattatgtgaattatatatgatgtttaagttgat 15817529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 19773475 - 19773558
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| ||||||||||| | ||||||  |||||||||||||||||||||||| |||||||||||||||||||||| | |||||||    
T  19773475 atatgatttgatgttgatggtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgttcttgatta 19773558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 25619655 - 25619738
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||| |||||| ||||||||  |||||||||||||||||||||||| |||||||||||| ||||||||||| |||||||    
T  25619655 atatgatttaatgttgatagtaatgtaatatatttgtatatgcattatgtgaattatataagatttttaagttgatgttgatta 25619738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 25755074 - 25754991
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||| |||||| ||||||||  |||||||||||||||||||||||| ||| |||||||||||||||||||| |||||||    
T  25755074 atatgatttaatgttgatagtaatgtaatatatttgtatatgcattatgtgaattttataagatgtttaagttgatgttgatta 25754991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 28103831 - 28103914
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||||||||||||| ||||| ||||||  ||||||||||||||||| |||||||||| ||||||||||||| |||||||    
T  28103831 atatgatttgatgttgttaataatgtgatataaatgtatatgcattatgtgaattatataagttgtttaagttgatgttgatta 28103914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 115 - 287
Target Start/End: Complemental strand, 25772985 - 25772812
Alignment:
Q  115 ttatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaatt-cttttcaaaggttgaagtattattaattggat 213  Q
    |||||||| ||| ||| || |||| ||||||| ||||||| ||||||||| | ||||||| |||||| | |||||||| ||||||||| |||||| | ||    
T  25772985 ttatgatgaattgttgatggctgttatgtataattatatt-aaataaattttgcatgttgttgaatttcatttcaaagattgaagtatcattaatggaat 25772887  T
Q  214 tgtcgaggtg-aagtcatatttacatatatgcattgatgagtagtggttgtcgttgatgttgttgagttgtatgt 287  Q
    ||| || ||| |||||||||| | | |||||||||| |||| ||| |||||||||| |  |||||||||||||||    
T  25772886 tgttgaagtgtaagtcatattcataaatatgcattgttgagcagttgttgtcgttgttcatgttgagttgtatgt 25772812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 6 - 84
Target Start/End: Complemental strand, 20136852 - 20136775
Alignment:
Q  6 atttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||||||||||||||| ||| |||||| |||||||| |||||||||||||||||| ||||||||||||| | |||||||    
T  20136852 atttgatgttgttagttatgtgatataattgtatat-cattatgtggattatatatgatgtttaagttgttgttgatta 20136775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 6 - 84
Target Start/End: Original strand, 22196017 - 22196094
Alignment:
Q  6 atttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||||||||||||||| ||| |||||| |||||||| |||||||||||||||||| ||||||||||||| | |||||||    
T  22196017 atttgatgttgttagttatgtgatataattgtatat-cattatgtggattatatatgatgtttaagttgttgttgatta 22196094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 6 - 84
Target Start/End: Complemental strand, 23076915 - 23076837
Alignment:
Q  6 atttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||||||||||||| ||||| |||||||||||||||||||||  || |||||||| ||||||||||||| | |||||||    
T  23076915 atttgatgttgttaataatgtgatatatttgtatatgcattacatgaattatatatgatgtttaagttgttgttgatta 23076837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 15705382 - 15705459
Alignment:
Q  7 tttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||||||||| | ||||||  |||||||||| ||||||||||||| |||||||||||||||||||||| | |||||||    
T  15705382 tttgatgttgatggtaatgtaatatatttgtttatgcattatgtgaattatataagatgtttaagttgttgttgatta 15705459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 140 - 266
Target Start/End: Complemental strand, 18137844 - 18137715
Alignment:
Q  140 atgtatatttatatttaaataaattatacatgttgctgaa-ttcttttcaaaggttgaagtattattaattggattgtcgag-gtg-aagtcatatttac 236  Q
    |||||||||||||| |||||||||||||||||| | |||| ||| ||||||||||||| |||| || | ||||||||| | | ||| |||||||||| |     
T  18137844 atgtatatttatatataaataaattatacatgtagttgaatttcatttcaaaggttgaggtatcatcagttggattgttgggagtgtaagtcatattcat 18137745  T
Q  237 atatatgcattgatgagtagtggttgtcgt 266  Q
    | |||||||||| |||||||| ||||||||    
T  18137744 aaatatgcattgttgagtagtagttgtcgt 18137715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 33443233 - 33443160
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttg 74  Q
    |||| |||| |||||| ||||||||  |||||||||||||||||||||||| ||||| ||||||||||||||||    
T  33443233 atatgatttaatgttgatagtaatgtaatatatttgtatatgcattatgtgaattatttaagatgtttaagttg 33443160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 140 - 287
Target Start/End: Complemental strand, 21470071 - 21469921
Alignment:
Q  140 atgtatatttatatttaaataaattatacatgttgctgaatt-cttttcaaaggttgaagtattattaattggattgtcgaggtg-aagtcatatttaca 237  Q
    ||||||||||||||| ||||||||||||||||||| |||||| | |||||||| ||||||||| ||||||   ||||| |||||| |||||||||| | |    
T  21470071 atgtatatttatatt-aaataaattatacatgttgttgaatttcatttcaaagattgaagtatcattaatgaaattgttgaggtgtaagtcatattcata 21469973  T
Q  238 tatatgcatt--gatgagtagtggttgtcgttgatgttgttgagttgtatgt 287  Q
     |||||||||  ||   ||||| |||||||||| |  |||||||||||||||    
T  21469972 aatatgcattttgagtggtagttgttgtcgttgttcatgttgagttgtatgt 21469921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 23415061 - 23414989
Alignment:
Q  12 tgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    ||||| ||||||||  |||||||||||||||||||||||| |||||||| ||||||||||||| | |||||||    
T  23415061 tgttgatagtaatgtaatatatttgtatatgcattatgtgaattatatatgatgtttaagttgttgttgatta 23414989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 82
Target Start/End: Original strand, 23528044 - 23528120
Alignment:
Q  6 atttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgat 82  Q
    ||||||||||| |||||||| ||| || |||||||||||||||||| |||||||| ||||||||||| ||| |||||    
T  23528044 atttgatgttgatagtaatgtgatgtagttgtatatgcattatgtgaattatatatgatgtttaagtcgatgttgat 23528120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 25752904 - 25752838
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtt 67  Q
    |||| |||| |||||| ||||||||  |||||||||||||||||||||||| |||||||||||||||    
T  25752904 atatgatttaatgttgatagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtt 25752838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 27556819 - 27556757
Alignment:
Q  12 tgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttg 74  Q
    ||||| ||||||||  |||||||||||||||||||||||| |||||||| |||||||||||||    
T  27556819 tgttgatagtaatgtaatatatttgtatatgcattatgtgaattatatatgatgtttaagttg 27556757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 84
Target Start/End: Complemental strand, 35008333 - 35008255
Alignment:
Q  6 atttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||||||||||||| ||||| ||||||||||||||| |||||  || |||||||| ||||||||||||| | |||||||    
T  35008333 atttgatgttgttaataatgtgatatatttgtatattcattacatgaattatatatgatgtttaagttgtttttgatta 35008255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 16493327 - 16493255
Alignment:
Q  8 ttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattga 81  Q
    |||| ||||||||||||| |||||||| ||||||||||||||||  ||| ||||||||||||||||||| ||||    
T  16493327 ttgaggttgttagtaatgtgatatatt-gtatatgcattatgtgatttacataagatgtttaagttgatgttga 16493255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 19362608 - 19362531
Alignment:
Q  6 atttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatt 83  Q
    |||| ||||||||||||||| |||||| || ||||||||||||||| ||||| ||||||||| |||||| | ||||||    
T  19362608 atttaatgttgttagtaatgtgatataattttatatgcattatgtgaattatttaagatgttcaagttgttgttgatt 19362531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 140 - 287
Target Start/End: Complemental strand, 21476572 - 21476422
Alignment:
Q  140 atgtatatttatatttaaataaattatacatgttgctgaatt-cttttcaaaggttgaagtattattaattggattgtcgaggtg-aagtcatatttaca 237  Q
    ||||||||||||||| ||||||||||||||| ||| |||||| | |||||||| ||||||||| |||||| | ||||| |||||| || ||||||| | |    
T  21476572 atgtatatttatatt-aaataaattatacatattgttgaatttcatttcaaagattgaagtatcattaatggaattgttgaggtgtaaatcatattcata 21476474  T
Q  238 tatatgcatt--gatgagtagtggttgtcgttgatgttgttgagttgtatgt 287  Q
     |||||||||  ||   ||||| |||||||||| |  |||||||||||||||    
T  21476473 aatatgcattttgagtggtagttgttgtcgttgttcatgttgagttgtatgt 21476422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 22806119 - 22806051
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgttta 69  Q
    |||| |||| |||||| | ||||||  |||||||||||||||||||||||| |||||||||||||||||    
T  22806119 atatgatttaatgttgatggtaatgtaatatatttgtatatgcattatgtgaattatataagatgttta 22806051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 84
Target Start/End: Original strand, 18177609 - 18177688
Alignment:
Q  6 atttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaag-ttgatattgatta 84  Q
    |||||||||||||| ||||| ||||||  ||||||||||||| ||| |||||||| |||||||||| ||||| |||||||    
T  18177609 atttgatgttgttaataatgtgatataaatgtatatgcattaagtgaattatatatgatgtttaagattgatgttgatta 18177688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 84
Target Start/End: Original strand, 18199353 - 18199432
Alignment:
Q  6 atttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaag-ttgatattgatta 84  Q
    |||||||||||||| ||||| ||||||  ||||||||||||| ||| |||||||| |||||||||| ||||| |||||||    
T  18199353 atttgatgttgttaataatgtgatataaatgtatatgcattaagtgaattatatatgatgtttaagattgatgttgatta 18199432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 84
Target Start/End: Complemental strand, 18204262 - 18204183
Alignment:
Q  6 atttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaag-ttgatattgatta 84  Q
    |||||||||||||| ||||| ||||||  ||||||||||||| ||| |||||||| |||||||||| ||||| |||||||    
T  18204262 atttgatgttgttaataatgtgatataaatgtatatgcattaagtgaattatatatgatgtttaagattgatgttgatta 18204183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 84
Target Start/End: Complemental strand, 20224126 - 20224048
Alignment:
Q  6 atttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||||| ||||||||  |||||||||| |||| |||||||| ||||| |||||||||||||||| | |||||||    
T  20224126 atttaatgttgatagtaatgtaatatatttgtgtatgaattatgtgaattatttaagatgtttaagttgttgttgatta 20224048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 84
Target Start/End: Complemental strand, 22118110 - 22118032
Alignment:
Q  6 atttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||||| ||||||||  |||||||||| |||| |||||||| ||||| |||||||||||||||| | |||||||    
T  22118110 atttaatgttgatagtaatgtaatatatttgtgtatgaattatgtgaattatttaagatgtttaagttgttgttgatta 22118032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 80
Target Start/End: Complemental strand, 15896114 - 15896045
Alignment:
Q  11 atgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattg 80  Q
    ||||||||||||||| |||||| || |||||||||||||||||  || ||||||||| |||||| |||||    
T  15896114 atgttgttagtaatgtgatatagttatatatgcattatgtggaaaatgtaagatgttcaagttgttattg 15896045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 76
Target Start/End: Complemental strand, 23539131 - 23539082
Alignment:
Q  27 gatatatttgtatatgcattatgtggattatataagatgtttaagttgat 76  Q
    |||||||||||| ||||||||||||||||||||| |||||||| ||||||    
T  23539131 gatatatttgtaaatgcattatgtggattatatatgatgtttatgttgat 23539082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 194
Target Start/End: Original strand, 9185720 - 9185775
Alignment:
Q  140 atgtatatttatatttaaataaattatacatgttgctgaa-ttcttttcaaaggtt 194  Q
    |||||||||||||||||||||||||||||| |||| |||| ||| |||||||||||    
T  9185720 atgtatatttatatttaaataaattatacaagttgttgaatttcatttcaaaggtt 9185775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 23538991 - 23538916
Alignment:
Q  8 ttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatt 83  Q
    |||||||||||  ||||| |||||| |||||||||| ||||||| || ||||| |||||||| |||||| ||||||    
T  23538991 ttgatgttgttgttaatgtgatatagttgtatatgcgttatgtgaatgatatatgatgtttaggttgatgttgatt 23538916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 181
Target Start/End: Complemental strand, 17414345 - 17414243
Alignment:
Q  79 tgattagttgtgcattttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctga 178  Q
    ||||||||||||||||||||| |||  ||| ||  |||||||||   | ||||| ||||||||||||  || ||||||| ||||| |||||||||| |||    
T  17414345 tgattagttgtgcattttctggaattattgaattgattatgatgatctgttgttaactgtgatgtatgattttatttaattaaatcatacatgttgttga 17414246  T
Q  179 att 181  Q
    |||    
T  17414245 att 17414243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 18706493 - 18706411
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatt 83  Q
    |||| |||||||||||||| |||||  |||||  |||||||||||||  || |||||||| |||||||||| || ||||||||    
T  18706493 atatgatttgatgttgttaataatgtcatataaatgtatatgcattacatgaattatatatgatgtttaagatgttattgatt 18706411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 174
Target Start/End: Complemental strand, 24720895 - 24720853
Alignment:
Q  132 tgactgtgatgtatatttatatttaaataaattatacatgttg 174  Q
    |||||||||||||| ||||||||||||||||| ||||||||||    
T  24720895 tgactgtgatgtatgtttatatttaaataaatcatacatgttg 24720853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 174
Target Start/End: Complemental strand, 23105535 - 23105447
Alignment:
Q  86 ttgtgcattttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttg 174  Q
    ||||| ||| |||| ||| |||||||  |||||||||  || ||| |||||||||||||| |||| |||||| ||||| ||||||||||    
T  23105535 ttgtggattctctggaattgttggattgattatgatgatttgttgatgactgtgatgtatgtttacatttaactaaatcatacatgttg 23105447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 19656075 - 19656138
Alignment:
Q  11 atgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttg 74  Q
    ||||||||||||||| |||||| || || |||||||||||||| ||| || |||||| ||||||    
T  19656075 atgttgttagtaatgtgatatacttatacatgcattatgtggaatatgtatgatgttgaagttg 19656138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 138 - 169
Target Start/End: Original strand, 23620992 - 23621023
Alignment:
Q  138 tgatgtatatttatatttaaataaattataca 169  Q
    ||||||||||||||||||||||||||||||||    
T  23620992 tgatgtatatttatatttaaataaattataca 23621023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 29416845 - 29416911
Alignment:
Q  9 tgatgttgttagtaatgagatatatttgtatatgcattatgtgg-attatataagatgtttaagttg 74  Q
    ||||||||||| | ||| | |||||||| | ||||||||||||| |||||||| |||||||||||||    
T  29416845 tgatgttgttaatgatgtggtatatttgcaaatgcattatgtggaattatatatgatgtttaagttg 29416911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 181
Target Start/End: Original strand, 10582716 - 10582769
Alignment:
Q  128 ttgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaatt 181  Q
    ||||||||||||||||||  || ||||||| ||||| |||||||||| ||||||    
T  10582716 ttgttgactgtgatgtatgcttttatttaattaaatcatacatgttgttgaatt 10582769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 180
Target Start/End: Original strand, 14132921 - 14132969
Alignment:
Q  132 tgactgtgatgtatatttatatttaaataaattatacatgttgctgaat 180  Q
    |||||||||||||  ||||||||||||||||| ||||||| || |||||    
T  14132921 tgactgtgatgtacgtttatatttaaataaatcatacatgctgttgaat 14132969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 17105913 - 17105849
Alignment:
Q  8 ttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagt 72  Q
    |||||||||||| ||| | |||||| ||||||||| |||||||| ||||| || |||||| ||||    
T  17105913 ttgatgttgttaataacgtgatatagttgtatatgaattatgtgaattatgtatgatgttaaagt 17105849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 197; Significance: 1e-107; HSPs: 2)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 79 - 287
Target Start/End: Original strand, 2538 - 2746
Alignment:
Q  79 tgattagttgtgcattttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctga 178  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2538 tgattaattgtgtattttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctga 2637  T
Q  179 attcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatgttgttga 278  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  2638 attcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatgtttacatatatgcattgatgagtagtggttgtcgttgatgttgttga 2737  T
Q  279 gttgtatgt 287  Q
    |||||||||    
T  2738 gttgtatgt 2746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 2425 - 2493
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgttta 69  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2425 atatgatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgttta 2493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 197; Significance: 1e-107; HSPs: 4)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 79 - 287
Target Start/End: Complemental strand, 110681 - 110473
Alignment:
Q  79 tgattagttgtgcattttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctga 178  Q
    |||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  110681 tgattaattgtgtattttctggaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctga 110582  T
Q  179 attcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatgttgttga 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  110581 attcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatgttgttga 110482  T
Q  279 gttgtatgt 287  Q
    |||||||||    
T  110481 gttgtatgt 110473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 110841 - 110758
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  110841 atatgatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 110758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 181
Target Start/End: Complemental strand, 25069 - 25001
Alignment:
Q  113 aattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaatt 181  Q
    ||||||||||  || ||| ||||||||||||||  |||||| ||||||||| |||||||||| ||||||    
T  25069 aattatgatgatttgttgatgactgtgatgtatgcttatatctaaataaatcatacatgttgttgaatt 25001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 35860 - 35811
Alignment:
Q  132 tgactgtgatgtatatttatatttaaataaattatacatgttgctgaatt 181  Q
    ||||||||||||||  |||||| ||||||||| |||||||||| ||||||    
T  35860 tgactgtgatgtatgcttatatctaaataaatcatacatgttgttgaatt 35811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 197; Significance: 1e-107; HSPs: 77)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 79 - 287
Target Start/End: Complemental strand, 18872354 - 18872146
Alignment:
Q  79 tgattagttgtgcattttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctga 178  Q
    |||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18872354 tgattaattgtgtattttctggaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctga 18872255  T
Q  179 attcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatgttgttga 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18872254 attcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatgttgttga 18872155  T
Q  279 gttgtatgt 287  Q
    |||||||||    
T  18872154 gttgtatgt 18872146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 79 - 287
Target Start/End: Complemental strand, 147475 - 147267
Alignment:
Q  79 tgattagttgtgcattttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctga 178  Q
    |||||| ||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  147475 tgattaattgtgtattttctggaatcgttggatcaattatgacggattattgttgactgtgatgtatatttatatttaaataaattatacatgatgctga 147376  T
Q  179 attcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatgttgttga 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  147375 attcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatgttgttga 147276  T
Q  279 gttgtatgt 287  Q
    |||||||||    
T  147275 gttgtatgt 147267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 79 - 287
Target Start/End: Complemental strand, 14566196 - 14565988
Alignment:
Q  79 tgattagttgtgcattttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctga 178  Q
    |||||| ||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14566196 tgattaattgtgtattttctagaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctga 14566097  T
Q  179 attcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatgttgttga 278  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14566096 attcttttcaaaggttgaagtattattgattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatgttgttga 14565997  T
Q  279 gttgtatgt 287  Q
    |||||||||    
T  14565996 gttgtatgt 14565988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 79 - 287
Target Start/End: Complemental strand, 16008572 - 16008364
Alignment:
Q  79 tgattagttgtgcattttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctga 178  Q
    |||||| ||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  16008572 tgattaattgtgtattttctggaatcgttggatcaattatgaaggattattgttgactgtgatgtatatttatatttaaataaattatacatgttcctga 16008473  T
Q  179 attcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatgttgttga 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16008472 attcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatgttgttga 16008373  T
Q  279 gttgtatgt 287  Q
    |||||||||    
T  16008372 gttgtatgt 16008364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 79 - 285
Target Start/End: Complemental strand, 14421759 - 14421553
Alignment:
Q  79 tgattagttgtgcattttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctga 178  Q
    |||||| ||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14421759 tgattaattgtgtattttctggaatcgttggatcaattatgatagattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctga 14421660  T
Q  179 attcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatgttgttga 278  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14421659 attcttttcaaaggttgaagtattataaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatgttgttga 14421560  T
Q  279 gttgtat 285  Q
    |||||||    
T  14421559 gttgtat 14421553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 79 - 287
Target Start/End: Complemental strand, 18607270 - 18607062
Alignment:
Q  79 tgattagttgtgcattttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctga 178  Q
    |||||| ||||| |||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  18607270 tgattaattgtgtattttctggaatcattggatcaattatgatggattattgttgattgtgatgtatatttatatttaaataaattatacatgttgctga 18607171  T
Q  179 attcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatgttgttga 278  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18607170 attcttttcaaaggttgaagtattatttattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatgttgttga 18607071  T
Q  279 gttgtatgt 287  Q
    |||||||||    
T  18607070 gttgtatgt 18607062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 105 - 268
Target Start/End: Original strand, 16575223 - 16575386
Alignment:
Q  105 gttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaattcttttcaaaggttgaagtattat 204  Q
    ||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  16575223 gttggattaattatgatggattattgttggttgtgatgtatatttatatttaaataaattatacatgttgttgaattcttttcaaaggttgaagtattat 16575322  T
Q  205 taattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttg 268  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  16575323 taattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtaggagttgtcgttg 16575386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 105 - 268
Target Start/End: Complemental strand, 16590439 - 16590276
Alignment:
Q  105 gttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaattcttttcaaaggttgaagtattat 204  Q
    ||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  16590439 gttggattaattatgatggattattgttggttgtgatgtatatttatatttaaataaattatacatgttgttgaattcttttcaaaggttgaagtattat 16590340  T
Q  205 taattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttg 268  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  16590339 taattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtaggagttgtcgttg 16590276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 16008732 - 16008649
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16008732 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 16008649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 14566356 - 14566273
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14566356 atatgatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 14566273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 18872514 - 18872431
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18872514 atatgatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 18872431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 11661460 - 11661377
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  11661460 atatgatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatgttgatta 11661377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 18607641 - 18607558
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  18607641 atatgatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatgttgatta 18607558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 116 - 266
Target Start/End: Original strand, 21519037 - 21519189
Alignment:
Q  116 tatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaa-ttcttttcaaaggttgaagtattattaattggatt 214  Q
    ||||||| ||| ||| || |||| |||||||||||||| |||||||||||||||||||| |||| ||| |||||||||||||||||| |||| ||| |||    
T  21519037 tatgatgaattgttgatggctgtcatgtatatttatatgtaaataaattatacatgttgttgaatttcatttcaaaggttgaagtatcattagttgaatt 21519136  T
Q  215 gtcgaggtg-aagtcatatttacatatatgcattgatgagtagtggttgtcgt 266  Q
    || | |||| |||||||||| | |||||||||||| |||||||| ||||||||    
T  21519137 gttggggtgtaagtcatattcatatatatgcattgttgagtagtagttgtcgt 21519189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 42462137 - 42462054
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    ||||||||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  42462137 atataatttgatgttgttagtaatgtgatatagttgtatattcattatgtggattatataagatgtttaagttgatgttgatta 42462054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 14422139 - 14422055
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatg-tttaagttgatattgatta 84  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||    
T  14422139 atatgatttgatgttgttagtaatgagatatatttgtatatgcattatgtggatcatataagatgttttaagttgatgttgatta 14422055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 116 - 266
Target Start/End: Original strand, 16668327 - 16668480
Alignment:
Q  116 tatgatggattattgttgactg-tgatgtatatttatatttaaataaattatacatgttgctgaatt-cttttcaaaggttgaagtattattaattggat 213  Q
    ||||||| ||||||| || ||| | |||||||||||||| |||||||| ||||||||||| |||||| | |||||||| ||| ||||| |||||||| ||    
T  16668327 tatgatgaattattgatggctgattatgtatatttatatctaaataaagtatacatgttgttgaatttcatttcaaagattggagtatcattaattgaat 16668426  T
Q  214 tgtcgaggtg-aagtcatatttacatatatgcattgatgagtagtggttgtcgt 266  Q
     || |||||| |||||||||| | |||||||||||| |||||||||||||||||    
T  16668427 cgttgaggtgcaagtcatattcatatatatgcattgttgagtagtggttgtcgt 16668480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 16996409 - 16996340
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaa 70  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  16996409 atatgatttgatgttgttagtaatgtgatatatttgtatatgcattatgtggattatataagatgtttaa 16996340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 116 - 266
Target Start/End: Original strand, 17642697 - 17642850
Alignment:
Q  116 tatgatggattattgttgactg-tgatgtatatttatatttaaataaattatacatgttgctgaatt-cttttcaaaggttgaagtattattaattggat 213  Q
    ||||||| ||||||| || ||| | |||||||||||||| |||||||| ||||||||||| |||||| | |||||||| ||| ||||| |||||||| ||    
T  17642697 tatgatgaattattgatggctgattatgtatatttatatctaaataaagtatacatgttgttgaatttcatttcaaagattggagtatcattaattgaat 17642796  T
Q  214 tgtcgaggtg-aagtcatatttacatatatgcattgatgagtagtggttgtcgt 266  Q
     || |||||| |||||||||| | |||||||||||| |||||||||||||||||    
T  17642797 cgttgaggtgcaagtcatattcatatatatgcattgttgagtagtggttgtcgt 17642850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 11768851 - 11768931
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattga 81  Q
    |||| |||||| ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  11768851 atatgatttgaggttgttagtaatgtgatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttga 11768931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 224 - 287
Target Start/End: Original strand, 10897018 - 10897081
Alignment:
Q  224 aagtcatatttacatatatgcattgatgagtagtggttgtcgttgatgttgttgagttgtatgt 287  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  10897018 aagtcatatttacatatatgcattgatgagtggtggttgtcgttgatgttgttgagttgtatgt 10897081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 38519560 - 38519477
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||||||||| ||||||||| |||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  38519560 atatgatttgatgttattagtaatgtgatatagttgtatatgcattatgtggattgtataagatgtttaagttgatgttgatta 38519477  T

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Target: chr7; HSP #23
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 130749 - 130833
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgat-attgatta 84  Q
    |||| |||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  130749 atatgatttgatgttattagtaatgtgatatagttgtatatgcattatgtggattatataaggtgtttaagttgatgattgatta 130833  T

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Target: chr7; HSP #24
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 20619569 - 20619485
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgat-attgatta 84  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||| |||||||||| ||||||||    
T  20619569 atatgatttgatgttgttagtaatgtgatatatttgtatatgcattatgtgaattatataatatgcttaagttgatgattgatta 20619485  T

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Target: chr7; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 46580608 - 46580691
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||| |||||| ||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  46580608 atatgatttaatgttgatagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgatta 46580691  T

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Target: chr7; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 76
Target Start/End: Original strand, 9033283 - 9033353
Alignment:
Q  6 atttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgat 76  Q
    |||||||||||||| ||||| |||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  9033283 atttgatgttgttaataatgtgatatagttgtatatgcattatgtgaattatataagatgtttaagttgat 9033353  T

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Target: chr7; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 147772 - 147704
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgttta 69  Q
    |||| |||||||||||| |||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  147772 atatgatttgatgttgtgagtaatgagatatatttgtataagcattatgtggattatatgagatgttta 147704  T

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Target: chr7; HSP #28
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 10501356 - 10501439
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| ||||||| || ||||||||| |||||| |||||||||||||||||| |||||||| ||||||||||||||| |||||||    
T  10501356 atatgatttgattttattagtaatgtgatatagttgtatatgcattatgtgaattatatatgatgtttaagttgatgttgatta 10501439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 13647594 - 13647511
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||| |||||| ||||||||  |||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||    
T  13647594 atatgatttaatgttgatagtaatgtaatatatttgtatatgcattatgtgaattatataagatgttaaagttgatgttgatta 13647511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 14273702 - 14273619
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||| |||||| ||||||||  ||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||    
T  14273702 atatgatttaatgttgatagtaatgtaatatatttgtatatgtattatgtgaattatataagatgtttaagttgatgttgatta 14273619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 16460698 - 16460781
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| ||||||||||| | ||||||  |||||||||||||||||||||||| |||||||||||||||||||||| | |||||||    
T  16460698 atatgatttgatgttgatggtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgttgttgatta 16460781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 16579946 - 16579863
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| ||||||||||| | ||||||  |||||||||||||||||||||||| |||||||||||||||||||||| | |||||||    
T  16579946 atatgatttgatgttgatggtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgtttttgatta 16579863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 16585717 - 16585800
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| ||||||||||| | ||||||  |||||||||||||||||||||||| |||||||||||||||||||||| | |||||||    
T  16585717 atatgatttgatgttgatggtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgtttttgatta 16585800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 16998780 - 16998697
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||| |||||| || |||||  |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  16998780 atatgatttaatgttgataataatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgatta 16998697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 20487729 - 20487646
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| ||||||||||| | ||||||  |||||||||||||||||||||||| |||||||||||||||||||||| | |||||||    
T  20487729 atatgatttgatgttgatggtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgttgttgatta 20487646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 32301475 - 32301392
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||| |||||| ||||||||  |||||||||||||||||||||||| |||||||||||| ||||||||||| |||||||    
T  32301475 atatgatttaatgttgatagtaatgtaatatatttgtatatgcattatgtgaattatataagatctttaagttgatgttgatta 32301392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 6 - 76
Target Start/End: Original strand, 9725597 - 9725667
Alignment:
Q  6 atttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgat 76  Q
    |||| ||||||||||||||| |||||| |||||||||||||||||| || |||||||||||||||||||||    
T  9725597 atttaatgttgttagtaatgtgatatagttgtatatgcattatgtgaatcatataagatgtttaagttgat 9725667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 9 - 84
Target Start/End: Original strand, 11525504 - 11525580
Alignment:
Q  9 tgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgat-attgatta 84  Q
    ||||||| ||||||||  |||||||| |||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  11525504 tgatgttattagtaatttgatatattggtatatgcattatgtgaattatataagatgtttaagttgatgattgatta 11525580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 14157053 - 14157120
Alignment:
Q  17 ttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    ||||||||| |||||| |||||||||||||||||| |||||||| ||||||||||||||| |||||||    
T  14157053 ttagtaatgtgatatagttgtatatgcattatgtgaattatatatgatgtttaagttgatgttgatta 14157120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 14258638 - 14258555
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| ||||||| ||| | ||||||  |||||||||||||||||||||||| |||||||||||||||||||||| | |||||||    
T  14258638 atatgatttgatattgatggtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgttgttgatta 14258555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 6 - 84
Target Start/End: Original strand, 9177603 - 9177681
Alignment:
Q  6 atttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||||| ||||||||  |||||||||||||||||||||||| ||||| |||||||||||||||| | |||||||    
T  9177603 atttaatgttgatagtaatgtaatatatttgtatatgcattatgtgaattatttaagatgtttaagttgttgttgatta 9177681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 135 - 266
Target Start/End: Complemental strand, 14038950 - 14038816
Alignment:
Q  135 ctgtgatgtatatttatatttaaa-taaattatacatgttgctgaatt-cttttcaaaggttgaagtattattaattggattgtcgaggtg-aagtcata 231  Q
    |||| ||||||||||||| ||||| ||||||||||| |||| |||||| | |||||||||||||||||| | |||||| ||||| | |||| ||||||||    
T  14038950 ctgttatgtatatttatacttaaaataaattatacacgttgttgaatttcatttcaaaggttgaagtatcactaattgaattgttggggtgtaagtcata 14038851  T
Q  232 tttacatatatgcattgatgagtagtggttgtcgt 266  Q
    || | | |||||||||| |||||||  ||||||||    
T  14038850 ttcatagatatgcattgttgagtagcagttgtcgt 14038816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 135 - 266
Target Start/End: Complemental strand, 14348980 - 14348846
Alignment:
Q  135 ctgtgatgtatatttatatttaaa-taaattatacatgttgctgaatt-cttttcaaaggttgaagtattattaattggattgtcgaggtg-aagtcata 231  Q
    |||| ||||||||||||| ||||| ||||||||||| |||| |||||| | |||||||||||||||||| | |||||| ||||| | |||| ||||||||    
T  14348980 ctgttatgtatatttatacttaaaataaattatacacgttgttgaatttcatttcaaaggttgaagtatcactaattgaattgttggggtgtaagtcata 14348881  T
Q  232 tttacatatatgcattgatgagtagtggttgtcgt 266  Q
    || | | |||||||||| |||||||  ||||||||    
T  14348880 ttcatagatatgcattgttgagtagcagttgtcgt 14348846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 1858775 - 1858847
Alignment:
Q  12 tgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    ||||| ||||||||  |||||||||||||||||||||||| |||||||| ||||||||||||| | |||||||    
T  1858775 tgttgatagtaatgtaatatatttgtatatgcattatgtgaattatatatgatgtttaagttgttgttgatta 1858847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 14929153 - 14929236
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||| |||||| ||||||||  ||||||||| |||||||||||||| | ||| |||||||||||||||||| |||||||    
T  14929153 atatgatttaatgttgatagtaatgtaatatatttggatatgcattatgtgaagtatttaagatgtttaagttgatgttgatta 14929236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 15352619 - 15352702
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||| |||||| ||||||||  ||||||||| |||||||||||||| | ||| |||||||||||||||||| |||||||    
T  15352619 atatgatttaatgttgatagtaatgtaatatatttggatatgcattatgtgaagtatttaagatgtttaagttgatgttgatta 15352702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 79 - 174
Target Start/End: Original strand, 16475961 - 16476056
Alignment:
Q  79 tgattagttgtgcattttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttg 174  Q
    |||||| ||||| |||||||| ||| ||||||| ||||||||||  || ||| |||||||||||||| ||||||| ||| ||||| ||||||||||    
T  16475961 tgattaattgtgtattttctggaattgttggattaattatgatgatttgttgatgactgtgatgtatgtttatatctaattaaatcatacatgttg 16476056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 17017400 - 17017483
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||| |||||| ||||||||  ||||||||||||||||||||| || ||||| |||||||||||||||| | |||||||    
T  17017400 atatgatttaatgttgatagtaatgtaatatatttgtatatgcattatatgaattatttaagatgtttaagttgttgttgatta 17017483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 25927195 - 25927257
Alignment:
Q  12 tgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttg 74  Q
    ||||| ||||||||  |||||||||||||||||||||||| |||||||| |||||||||||||    
T  25927195 tgttgatagtaatgtaatatatttgtatatgcattatgtgaattatatatgatgtttaagttg 25927257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 135 - 206
Target Start/End: Complemental strand, 15690237 - 15690165
Alignment:
Q  135 ctgtgatgtatatttatatttaaataaattatacatgttgctgaa-ttcttttcaaaggttgaagtattatta 206  Q
    |||| |||||||||||||||||||||||||||||| |||| |||| ||| ||||||||||||| |||| ||||    
T  15690237 ctgttatgtatatttatatttaaataaattatacaagttgttgaatttcatttcaaaggttgatgtatcatta 15690165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 135 - 206
Target Start/End: Complemental strand, 15697830 - 15697758
Alignment:
Q  135 ctgtgatgtatatttatatttaaataaattatacatgttgctgaa-ttcttttcaaaggttgaagtattatta 206  Q
    |||| |||||||||||||||||||||||||||||| |||| |||| ||| ||||||||||||| |||| ||||    
T  15697830 ctgttatgtatatttatatttaaataaattatacaagttgttgaatttcatttcaaaggttgatgtatcatta 15697758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 84
Target Start/End: Original strand, 17060361 - 17060440
Alignment:
Q  6 atttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatg-tttaagttgatattgatta 84  Q
    |||| |||||| ||||||||  | |||||||||||||||||||||| ||||||||||||| ||||||||||  |||||||    
T  17060361 atttaatgttgatagtaatgtcaaatatttgtatatgcattatgtgaattatataagatgttttaagttgaagttgatta 17060440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 68
Target Start/End: Original strand, 1867932 - 1867994
Alignment:
Q  6 atttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgttt 68  Q
    |||||||||||||| ||||| |||||||||||||||||||||  || |||||||| |||||||    
T  1867932 atttgatgttgttaataatgtgatatatttgtatatgcattacatgaattatatatgatgttt 1867994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 13918469 - 13918531
Alignment:
Q  12 tgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttg 74  Q
    ||||| ||||||||  ||||||||||||||||||| |||| |||||||| |||||||||||||    
T  13918469 tgttgatagtaatgtaatatatttgtatatgcattttgtgaattatatatgatgtttaagttg 13918531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 68
Target Start/End: Original strand, 15008436 - 15008498
Alignment:
Q  6 atttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgttt 68  Q
    |||||||||||||| ||||| |||||||||||||||||||||  || |||||||| |||||||    
T  15008436 atttgatgttgttaataatgtgatatatttgtatatgcattacttgaattatatatgatgttt 15008498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 86 - 174
Target Start/End: Complemental strand, 15142543 - 15142455
Alignment:
Q  86 ttgtgcattttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttg 174  Q
    ||||| |||||||| ||| ||||||| || |||||||  || ||| |||||||||||||| |||| |||||| ||||| ||||||||||    
T  15142543 ttgtgtattttctggaattgttggattaactatgatgatttgttgatgactgtgatgtatgtttacatttaattaaatcatacatgttg 15142455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 84
Target Start/End: Original strand, 10896687 - 10896726
Alignment:
Q  45 ttatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  10896687 ttatgtggattatataagatgtttaagttgatgttgatta 10896726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 84
Target Start/End: Complemental strand, 15167346 - 15167307
Alignment:
Q  45 ttatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  15167346 ttatgtggattatataagatgtttaagttgatgttgatta 15167307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 74
Target Start/End: Original strand, 16109453 - 16109520
Alignment:
Q  8 ttgatgttgttagtaatgagatatatttgtatatgcattatgtgg-attatataagatgtttaagttg 74  Q
    |||||||||||| | ||| | |||||||||| ||||||||||||| |||||||| |||||||||||||    
T  16109453 ttgatgttgttaatgatgtggtatatttgtaaatgcattatgtggaattatatatgatgtttaagttg 16109520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 2529986 - 2530052
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtt 67  Q
    |||| |||| |||||| |||| |||  |||||||||||||||||||||||| ||||| |||||||||    
T  2529986 atatgatttaatgttgatagtgatgtaatatatttgtatatgcattatgtgaattatttaagatgtt 2530052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 68
Target Start/End: Original strand, 20220127 - 20220189
Alignment:
Q  6 atttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgttt 68  Q
    |||||||||||||| ||||| |||||| ||||||||||||||  || |||||||| |||||||    
T  20220127 atttgatgttgttaataatgtgatataattgtatatgcattacatgaattatatatgatgttt 20220189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 16091934 - 16091874
Alignment:
Q  12 tgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagt 72  Q
    |||||||| |||||  | ||||||||||| ||||||||||||||||||| |||| ||||||    
T  16091934 tgttgttaataatgttacatatttgtatacgcattatgtggattatatatgatgattaagt 16091874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 268
Target Start/End: Original strand, 41782989 - 41783033
Alignment:
Q  224 aagtcatatttacatatatgcattgatgagtagtggttgtcgttg 268  Q
    |||||||||||| |||||||||||||||| |||||| ||||||||    
T  41782989 aagtcatatttatatatatgcattgatgaatagtggctgtcgttg 41783033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 79 - 174
Target Start/End: Original strand, 16073794 - 16073889
Alignment:
Q  79 tgattagttgtgcattttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttg 174  Q
    |||||| ||||| ||||| || ||| ||||||| || |||||||  || ||| |||||||||||||| |||| |||||| ||||  ||||||||||    
T  16073794 tgattatttgtgtattttttggaattgttggattaactatgatgatttgttgatgactgtgatgtatgtttacatttaattaaaccatacatgttg 16073889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 48991368 - 48991287
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||| |||||| |||||||  |||||||| ||||||||||||| || ||||| |||||||||||||||| | |||||||    
T  48991368 atatgatttaatgttgatagtaatt-gatatatt-gtatatgcattatctgaattatttaagatgtttaagttgttgttgatta 48991287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 709262 - 709331
Alignment:
Q  11 atgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattg 80  Q
    ||||||||||| ||| |||||| || | ||||||||||||||| ||| || |||||| |||||| |||||    
T  709262 atgttgttagtgatgtgatatagttatttatgcattatgtggaatatgtatgatgttgaagttgttattg 709331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 181
Target Start/End: Original strand, 14169408 - 14169461
Alignment:
Q  128 ttgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaatt 181  Q
    ||||||||||||||||||  || ||||||| ||||| |||||||||| ||||||    
T  14169408 ttgttgactgtgatgtatgcttttatttaattaaatcatacatgttgttgaatt 14169461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 181
Target Start/End: Original strand, 14178882 - 14178935
Alignment:
Q  128 ttgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaatt 181  Q
    ||||||||||||||||||  || ||||||| ||||| |||||||||| ||||||    
T  14178882 ttgttgactgtgatgtatgcttttatttaattaaatcatacatgttgttgaatt 14178935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 76
Target Start/End: Original strand, 14416246 - 14416283
Alignment:
Q  39 tatgcattatgtggattatataagatgtttaagttgat 76  Q
    |||||||||| ||||||||| |||||||||||||||||    
T  14416246 tatgcattatatggattatacaagatgtttaagttgat 14416283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 287
Target Start/End: Original strand, 832932 - 832960
Alignment:
Q  259 gttgtcgttgatgttgttgagttgtatgt 287  Q
    |||||||||||||||||||||||||||||    
T  832932 gttgtcgttgatgttgttgagttgtatgt 832960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 287
Target Start/End: Original strand, 836975 - 837003
Alignment:
Q  259 gttgtcgttgatgttgttgagttgtatgt 287  Q
    |||||||||||||||||||||||||||||    
T  836975 gttgtcgttgatgttgttgagttgtatgt 837003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 287
Target Start/End: Original strand, 1198112 - 1198140
Alignment:
Q  259 gttgtcgttgatgttgttgagttgtatgt 287  Q
    |||||||||||||||||||||||||||||    
T  1198112 gttgtcgttgatgttgttgagttgtatgt 1198140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 287
Target Start/End: Original strand, 1202155 - 1202183
Alignment:
Q  259 gttgtcgttgatgttgttgagttgtatgt 287  Q
    |||||||||||||||||||||||||||||    
T  1202155 gttgtcgttgatgttgttgagttgtatgt 1202183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 1490117 - 1490173
Alignment:
Q  11 atgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtt 67  Q
    ||||||||| ||||| |||||| || || |||||||||||||| |||||| ||||||    
T  1490117 atgttgttaataatgtgatatacttatacatgcattatgtggaatatatatgatgtt 1490173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 287
Target Start/End: Original strand, 3289731 - 3289759
Alignment:
Q  259 gttgtcgttgatgttgttgagttgtatgt 287  Q
    |||||||||||||||||||||||||||||    
T  3289731 gttgtcgttgatgttgttgagttgtatgt 3289759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 174
Target Start/End: Original strand, 11857527 - 11857623
Alignment:
Q  79 tgattagttgtgcatttt-ctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttg 174  Q
    |||||| ||||||||||| ||| ||| |||||||  ||||| |||   | ||| |||||||||||||| |||||| |||||||||| || |||||||    
T  11857527 tgattaattgtgcatttttctggaattgttggattgattataatgatctgttgatgactgtgatgtatgtttataattaaataaatcattcatgttg 11857623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 287
Target Start/End: Complemental strand, 13894236 - 13894208
Alignment:
Q  259 gttgtcgttgatgttgttgagttgtatgt 287  Q
    |||||||||||||||||||||||||||||    
T  13894236 gttgtcgttgatgttgttgagttgtatgt 13894208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 197; Significance: 1e-107; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 79 - 287
Target Start/End: Complemental strand, 22336595 - 22336387
Alignment:
Q  79 tgattagttgtgcattttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctga 178  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  22336595 tgattaattgtgtattttctgaaatcgttggatcaattatgatggattattgttgactgtggtgtatatttatatttaaataaattatacatgttgctga 22336496  T
Q  179 attcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatgttgttga 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22336495 attcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatgttgttga 22336396  T
Q  279 gttgtatgt 287  Q
    |||||||||    
T  22336395 gttgtatgt 22336387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 79 - 287
Target Start/End: Original strand, 37598975 - 37599183
Alignment:
Q  79 tgattagttgtgcattttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctga 178  Q
    |||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37598975 tgattaattgtgtattttctggaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctga 37599074  T
Q  179 attcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatgttgttga 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37599075 attcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatgttgttga 37599174  T
Q  279 gttgtatgt 287  Q
    |||||||||    
T  37599175 gttgtatgt 37599183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 79 - 287
Target Start/End: Complemental strand, 22340133 - 22339925
Alignment:
Q  79 tgattagttgtgcattttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctga 178  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  22340133 tgattaattgtgtattttctgaaatcgttggatcaattatgatggattattgttgactgtggtgtataattatatttaaataaattatacatgttgctga 22340034  T
Q  179 attcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatgttgttga 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22340033 attcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatgttgttga 22339934  T
Q  279 gttgtatgt 287  Q
    |||||||||    
T  22339933 gttgtatgt 22339925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 79 - 287
Target Start/End: Original strand, 28371114 - 28371322
Alignment:
Q  79 tgattagttgtgcattttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctga 178  Q
    |||||| ||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28371114 tgattaattgtgtattttctagaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctga 28371213  T
Q  179 attcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatgttgttga 278  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28371214 attcttttcaaaggttgaagtattattgattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatgttgttga 28371313  T
Q  279 gttgtatgt 287  Q
    |||||||||    
T  28371314 gttgtatgt 28371322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 79 - 287
Target Start/End: Complemental strand, 42960570 - 42960360
Alignment:
Q  79 tgattagttgtgcattttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctga 178  Q
    |||||| ||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42960570 tgattaattgtgtattttctggaatcgttggatcaattatgatgggttattgttgactgtgatgtatatttatatttaaataaattatacatgttgctga 42960471  T
Q  179 attcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattg--atgagtagtggttgtcgttgatgttgtt 276  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  42960470 attcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatatgagtagtggttgtcgttgatgttgtt 42960371  T
Q  277 gagttgtatgt 287  Q
    |||||||||||    
T  42960370 gagttgtatgt 42960360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 121 - 287
Target Start/End: Original strand, 38145485 - 38145651
Alignment:
Q  121 tggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaattcttttcaaaggttgaagtattattaattggattgtcgag 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38145485 tggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaattcttttcaaaggttgaagtattattaattggattgtcgag 38145584  T
Q  221 gtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatgttgttgagttgtatgt 287  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  38145585 gtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatgttgttaagttgtatgt 38145651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 103 - 224
Target Start/End: Complemental strand, 19511357 - 19511236
Alignment:
Q  103 tcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaattcttttcaaaggttgaagtatt 202  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19511357 tcgttggatcaattatgatggattattgttgactatgatgtatatttatatttaaataaattatacatgttgctgaattcttttcaaaggttgaagtatt 19511258  T
Q  203 attaattggattgtcgaggtga 224  Q
    |||||||||||||||| |||||    
T  19511257 attaattggattgtcgtggtga 19511236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 37598815 - 37598898
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37598815 atatgatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 37598898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 42960730 - 42960647
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42960730 atatgatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 42960647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 9 - 84
Target Start/End: Original strand, 28370962 - 28371037
Alignment:
Q  9 tgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  28370962 tgatgttgttagtaatgagatatatttgcatatgcattatgtggattatataagatgtttaagttgatattgatta 28371037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 23469990 - 23469907
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  23469990 atatgatttgatgttgttagtaatgtgatatagttgtatatgcattatgtggattatataagatgtttaagttgatgttgatta 23469907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 116 - 256
Target Start/End: Original strand, 17022647 - 17022788
Alignment:
Q  116 tatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaa-ttcttttcaaaggttgaagtattattaattggatt 214  Q
    ||||||| ||||||| || |||| ||||||||| ||||||||||||||||||||||||| |||| ||| |||||| ||||| ||||||||||||||  ||    
T  17022647 tatgatgaattattgatggctgttatgtatatt-atatttaaataaattatacatgttgttgaatttcatttcaagggttggagtattattaattgagtt 17022745  T
Q  215 gtcgaggtg-aagtcatatttacatatatgcattgatgagtag 256  Q
    || |||||| |||||||||||| |||||||||||| |||||||    
T  17022746 gttgaggtgtaagtcatatttatatatatgcattgttgagtag 17022788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 25574402 - 25574485
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| ||||||||||| |||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  25574402 atatgatttgatgttgatagtaatgtgatatagttgtatatgcattatgtgaattatataagatgtttaagttgatgttgatta 25574485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 25575595 - 25575678
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| ||||||||||| |||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  25575595 atatgatttgatgttgatagtaatgtgatatagttgtatatgcattatgtgaattatataagatgtttaagttgatgttgatta 25575678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 38145436 - 38145492
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattat 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38145436 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattat 38145492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 25576788 - 25576871
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||| |||||| |||||||| |||||| |||||||||||| ||||| |||||||||||||||||||||||| |||||||    
T  25576788 atatgattttatgttgatagtaatgtgatatagttgtatatgcatgatgtgaattatataagatgtttaagttgatgttgatta 25576871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 33895588 - 33895661
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttg 74  Q
    |||| ||||||||||| | ||||||  |||||||||||||||||||||||| ||||||||||||||||||||||    
T  33895588 atatgatttgatgttgatggtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttg 33895661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 6766016 - 6765933
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||| |||||| ||||||||   ||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||    
T  6766016 atatgatttaatgttgatagtaatgtattatatttgtatatgcattatgtgaattatataagatgcttaagttgatgttgatta 6765933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 30138861 - 30138944
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||| |||||  ||||||||  |||||||||||||||||||||||| |||||||||||||||||||||| | |||||||    
T  30138861 atatgatttaatgttcgtagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgttgttgatta 30138944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 6 - 72
Target Start/End: Original strand, 26732771 - 26732837
Alignment:
Q  6 atttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagt 72  Q
    |||| |||||| ||| |||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  26732771 atttaatgttgatagaaatgtgatatatttgtatatgcattatgtggattaaataagatgtttaagt 26732837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 6 - 72
Target Start/End: Original strand, 26740584 - 26740650
Alignment:
Q  6 atttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagt 72  Q
    |||| |||||| ||| |||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  26740584 atttaatgttgatagaaatgtgatatatttgtatatgcattatgtggattaaataagatgtttaagt 26740650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 21731401 - 21731473
Alignment:
Q  8 ttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattga 81  Q
    |||| |||||||||||||||||||||| ||||||||||||||||  ||| ||||||||||||||||||| ||||    
T  21731401 ttgaggttgttagtaatgagatatatt-gtatatgcattatgtgatttacataagatgtttaagttgatgttga 21731473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 86 - 174
Target Start/End: Complemental strand, 10035458 - 10035370
Alignment:
Q  86 ttgtgcattttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttg 174  Q
    ||||| |||||||| ||| ||||||| |||||||||| ||| ||| |||||||||||||| ||||||| ||| ||||| ||||||||||    
T  10035458 ttgtgtattttctggaattgttggattaattatgatgaattgttgatgactgtgatgtatgtttatatctaattaaatcatacatgttg 10035370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 84
Target Start/End: Original strand, 22107394 - 22107450
Alignment:
Q  28 atatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| | |||||||    
T  22107394 atatatttgtatatgcattatgtgaattatataagatgtttaagttgttgttgatta 22107450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 84
Target Start/End: Original strand, 21328153 - 21328231
Alignment:
Q  6 atttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||||||||| | | ||||| |||||| ||||||||||||||||||  |||| |||||||||||||||||| |||||||    
T  21328153 atttgatgttataaataatgtgatatagttgtatatgcattatgtgatttatgtaagatgtttaagttgatgttgatta 21328231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 23444010 - 23444104
Alignment:
Q  79 tgattagttgtgcattttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgtt 173  Q
    |||||| ||||  ||||||||  || ||||||| | |||||||| ||| ||| |||||||||||||| ||||||||||||||||| |||||||||    
T  23444010 tgattaattgtatattttctgggattgttggattacttatgatgaattgttgatgactgtgatgtatgtttatatttaaataaatcatacatgtt 23444104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 21809521 - 21809593
Alignment:
Q  8 ttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattga 81  Q
    |||| ||||||||||||| |||||||| ||||||||||||||||  ||| ||||||||||||||||||| ||||    
T  21809521 ttgaggttgttagtaatgtgatatatt-gtatatgcattatgtgatttacataagatgtttaagttgatgttga 21809593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 84
Target Start/End: Complemental strand, 22336711 - 22336672
Alignment:
Q  45 ttatgtggattatataagatgtttaagttgatattgatta 84  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  22336711 ttatgtggattatataagatgtttaagttgatattgatta 22336672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 84
Target Start/End: Complemental strand, 22340249 - 22340210
Alignment:
Q  45 ttatgtggattatataagatgtttaagttgatattgatta 84  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  22340249 ttatgtggattatataagatgtttaagttgatattgatta 22340210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 92 - 174
Target Start/End: Complemental strand, 18819243 - 18819161
Alignment:
Q  92 attttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttg 174  Q
    |||||||| ||| ||||||| ||||||||||  || ||| |||||||||||||| ||||||| ||| ||||| ||||||||||    
T  18819243 attttctggaattgttggattaattatgatgacttgttgatgactgtgatgtatgtttatatctaattaaatcatacatgttg 18819161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 84
Target Start/End: Complemental strand, 19511577 - 19511538
Alignment:
Q  45 ttatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  19511577 ttatgtggattatataagatgtttaagttgatgttgatta 19511538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 79 - 174
Target Start/End: Original strand, 21901689 - 21901784
Alignment:
Q  79 tgattagttgtgcattttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttg 174  Q
    |||||| ||||| ||||| || ||| ||||||| |||||||| |  || ||| |||||||||||||| ||||||| ||| ||||| ||||||||||    
T  21901689 tgattaattgtgtattttttggaattgttggattaattatgaagatttgttggtgactgtgatgtatgtttatatctaattaaatcatacatgttg 21901784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 84
Target Start/End: Complemental strand, 22750325 - 22750286
Alignment:
Q  45 ttatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  22750325 ttatgtggattatataagatgtttaagttgatgttgatta 22750286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 181
Target Start/End: Complemental strand, 10817108 - 10817019
Alignment:
Q  92 attttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaatt 181  Q
    |||||||||||| |||||||  | ||| |||  || ||| |||||||||||||| |||| |||||| ||||| |||||||||| ||||||    
T  10817108 attttctgaaattgttggattgactataatgatttgttgatgactgtgatgtatgtttacatttaattaaatcatacatgttgttgaatt 10817019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 20572069 - 20572025
Alignment:
Q  6 atttgatgttgttagtaatgagatatatttgtatatgcattatgt 50  Q
    ||||||||||||||||||||  ||||| |||||||||||||||||    
T  20572069 atttgatgttgttagtaatgtaatatagttgtatatgcattatgt 20572025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 174
Target Start/End: Complemental strand, 25013898 - 25013810
Alignment:
Q  86 ttgtgcattttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttg 174  Q
    ||||| |||||||| ||| | ||||| || |||||||   | ||| |||||||||||||| ||||||||||| ||||| ||||||||||    
T  25013898 ttgtgtattttctggaattgctggattaaatatgatgacctgttgatgactgtgatgtatgtttatatttaattaaatcatacatgttg 25013810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 79 - 174
Target Start/End: Complemental strand, 21888903 - 21888808
Alignment:
Q  79 tgattagttgtgcattttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttg 174  Q
    |||||| | ||| ||||||||  || |||||||  |||||||||  || ||| |||||||||||||| ||||||| ||| ||||| ||||||||||    
T  21888903 tgattaatggtgtattttctgggattgttggattgattatgatgatttgttgatgactgtgatgtatgtttatatctaattaaatcatacatgttg 21888808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 10816582 - 10816516
Alignment:
Q  9 tgatgttgttagtaatgagatatatttgtatatgcattatgtgga-ttatataagatgtttaagttg 74  Q
    ||||||||||| | ||| | |||||||| | |||||||||||||| ||||||| |||||||||||||    
T  10816582 tgatgttgttaatgatgtggtatatttgcaaatgcattatgtggagttatatatgatgtttaagttg 10816516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 174
Target Start/End: Complemental strand, 21495179 - 21495118
Alignment:
Q  113 aattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttg 174  Q
    ||||||||||  || ||| |||||||||||||| ||||||| | ||||||| ||||||||||    
T  21495179 aattatgatgatttgttgatgactgtgatgtatgtttatatctcaataaatcatacatgttg 21495118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 174
Target Start/End: Original strand, 15193842 - 15193921
Alignment:
Q  94 tttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttg 174  Q
    |||||| ||| ||||||| || ||||||| |||  || ||| |||||||||| ||||||||||| ||||| ||||||||||    
T  15193842 tttctggaattgttggattaactatgatg-atttgtgatgattgtgatgtatgtttatatttaattaaatcatacatgttg 15193921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 76
Target Start/End: Original strand, 27869281 - 27869321
Alignment:
Q  37 tatatgcattatgtggattatataagatg-tttaagttgat 76  Q
    ||||||||||||||||||||||||| ||| |||||||||||    
T  27869281 tatatgcattatgtggattatataacatgatttaagttgat 27869321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 197; Significance: 1e-107; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 79 - 287
Target Start/End: Original strand, 6261237 - 6261445
Alignment:
Q  79 tgattagttgtgcattttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctga 178  Q
    |||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6261237 tgattaattgtgtattttctggaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctga 6261336  T
Q  179 attcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatgttgttga 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6261337 attcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatgttgttga 6261436  T
Q  279 gttgtatgt 287  Q
    |||||||||    
T  6261437 gttgtatgt 6261445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 79 - 287
Target Start/End: Original strand, 19662513 - 19662721
Alignment:
Q  79 tgattagttgtgcattttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctga 178  Q
    |||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19662513 tgattaattgtgtattttctggaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctga 19662612  T
Q  179 attcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatgttgttga 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19662613 attcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatgttgttga 19662712  T
Q  279 gttgtatgt 287  Q
    |||||||||    
T  19662713 gttgtatgt 19662721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 79 - 287
Target Start/End: Complemental strand, 9241737 - 9241529
Alignment:
Q  79 tgattagttgtgcattttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctga 178  Q
    |||||| || || |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9241737 tgattaattatgtattttctggaatcattggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctga 9241638  T
Q  179 attcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatgttgttga 278  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9241637 attcatttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatgttgttga 9241538  T
Q  279 gttgtatgt 287  Q
    |||||||||    
T  9241537 gttgtatgt 9241529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 93 - 268
Target Start/End: Complemental strand, 17634227 - 17634050
Alignment:
Q  93 ttttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctg--aattcttttcaaa 190  Q
    ||||||| ||| ||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||    
T  17634227 ttttctggaattgttggattaattatgatggattattgttggttgtgatgtatatttatatttaaataaattatacatgttgttgtgaattcttttcaaa 17634128  T
Q  191 ggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttg 268  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17634127 ggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttg 17634050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 103 - 224
Target Start/End: Complemental strand, 6482679 - 6482558
Alignment:
Q  103 tcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaattcttttcaaaggttgaagtatt 202  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6482679 tcgttggatcaattatgatggattattgttgactatgatgtatatttatatttaaataaattatacatgttgctgaattcttttcaaaggttgaagtatt 6482580  T
Q  203 attaattggattgtcgaggtga 224  Q
    |||||||||||||||| |||||    
T  6482579 attaattggattgtcgtggtga 6482558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 103 - 224
Target Start/End: Complemental strand, 6486146 - 6486025
Alignment:
Q  103 tcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaattcttttcaaaggttgaagtatt 202  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6486146 tcgttggatcaattatgatggattattgttgactatgatgtatatttatatttaaataaattatacatgttgctgaattcttttcaaaggttgaagtatt 6486047  T
Q  203 attaattggattgtcgaggtga 224  Q
    |||||||||||||||| |||||    
T  6486046 attaattggattgtcgtggtga 6486025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 79 - 181
Target Start/End: Original strand, 30644139 - 30644241
Alignment:
Q  79 tgattagttgtgcattttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctga 178  Q
    |||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30644139 tgattaattgtgtattttctggaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctga 30644238  T
Q  179 att 181  Q
    |||    
T  30644239 att 30644241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 19662353 - 19662436
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19662353 atatgatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 19662436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 6261076 - 6261160
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatat-gcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  6261076 atataatttgatgttgttagtaatgagatatatttgtatattgcattatgtggattatataagatgtttaagttgatattgatta 6261160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 9242114 - 9242031
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  9242114 atatgatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatgttgatta 9242031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 30643983 - 30644062
Alignment:
Q  5 aatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  30643983 aatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagtagatattgatta 30644062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 113 - 256
Target Start/End: Complemental strand, 23148921 - 23148776
Alignment:
Q  113 aattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaa-ttcttttcaaaggttgaagtattattaattgg 211  Q
    |||||||||| ||  ||| || |||| |||||||| |||||||||||||||||||||||||| |||| ||| |||||||||||| ||||||||||||||     
T  23148921 aattatgatgaatcgttgatggctgttatgtatatctatatttaaataaattatacatgttgttgaatttcatttcaaaggttggagtattattaattga 23148822  T
Q  212 attgtcgaggtg-aagtcatatttacatatatgcattgatgagtag 256  Q
    ||||| |||||| |||||||||| | |||||||||||| |||||||    
T  23148821 attgttgaggtgtaagtcatattcatatatatgcattgttgagtag 23148776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 113 - 256
Target Start/End: Complemental strand, 23560711 - 23560566
Alignment:
Q  113 aattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaa-ttcttttcaaaggttgaagtattattaattgg 211  Q
    |||||||||| ||  ||| || |||| |||||||| |||||||||||||||||||||||||| |||| ||| |||||||||||| ||||||||||||||     
T  23560711 aattatgatgaatcgttgatggctgttatgtatatctatatttaaataaattatacatgttgttgaatttcatttcaaaggttggagtattattaattga 23560612  T
Q  212 attgtcgaggtg-aagtcatatttacatatatgcattgatgagtag 256  Q
    ||||| |||||| |||||||||| | |||||||||||| |||||||    
T  23560611 attgttgaggtgtaagtcatattcatatatatgcattgttgagtag 23560566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 21073425 - 21073508
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||||    
T  21073425 atatgatttgatgttgttagtaatgagatatatttgtatattcattatgtggattatataagatatttaagttgatgttgatta 21073508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 21237940 - 21237866
Alignment:
Q  2 tataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgat 76  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  21237940 tataatttgatgttgttagtaatgtgatatagttgtatatgcattatgtgaattatataagatgtttaagttgat 21237866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 19201907 - 19201991
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgat-attgatta 84  Q
    |||| |||||| ||||||||||||| |||||||||||||||||||||| || ||||||||||||| |||||||||| ||||||||    
T  19201907 atatgatttgaagttgttagtaatgtgatatatttgtatatgcattatatgaattatataagatgcttaagttgatgattgatta 19201991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 21081669 - 21081752
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||| |||||| || |||||  |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  21081669 atatgatttaatgttgatactaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgatta 21081752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 22173726 - 22173809
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||| |||||| ||||||||  |||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  22173726 atatgatttaatgttgatagtaatgtaatatatttgtatatgcattaagtgaattatataagatgtttaagttgatgttgatta 22173809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 9 - 84
Target Start/End: Complemental strand, 34137120 - 34137045
Alignment:
Q  9 tgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||||||  |||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  34137120 tgatgttactagtaatgtgatataattgtatatgcattatgtgaattatataagatgtttaagttgatgttgatta 34137045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 28 - 84
Target Start/End: Original strand, 34874172 - 34874228
Alignment:
Q  28 atatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  34874172 atatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgatta 34874228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 27472607 - 27472524
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||| |||||| |||||||   |||||||||||||||||||||||| ||||||||| |||||||||||||| |||||||    
T  27472607 atatgatttaatgttgatagtaatataatatatttgtatatgcattatgtgaattatataatatgtttaagttgatgttgatta 27472524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 18546877 - 18546961
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggatt-atataagatgtttaagttgatattgatta 84  Q
    ||||| ||||||||||||||||||| |||| |||||||||||||||||||  ||| || |||||||| ||||||||| |||||||    
T  18546877 atatattttgatgttgttagtaatgtgatacatttgtatatgcattatgtaaattaatgtaagatgtctaagttgatgttgatta 18546961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 31345293 - 31345221
Alignment:
Q  12 tgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    ||||| ||||||||  |||||||||||||||||||||||| |||||||| ||||||||||||| | |||||||    
T  31345293 tgttgatagtaatgtaatatatttgtatatgcattatgtgaattatatatgatgtttaagttgttgttgatta 31345221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 18358666 - 18358749
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||| |||||| ||||||||   |||||||||||||||| |||||| ||||||||||||| |||||||||| |||||||    
T  18358666 atatgatttaatgttgatagtaatgtattatatttgtatatgcaatatgtgaattatataagatgcttaagttgatgttgatta 18358749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 23069216 - 23069299
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| ||||||||||| | | ||||  |||||||| ||||||||||||||| |||||||||||||||||||||| | |||||||    
T  23069216 atatgatttgatgttgatggcaatgtaatatatttttatatgcattatgtgaattatataagatgtttaagttgttgttgatta 23069299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 26392543 - 26392498
Alignment:
Q  27 gatatatttgtatatgcattatgtggattatataagatgtttaagt 72  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    
T  26392543 gatatatttgtatatgcattatgtggattagataagatgtttaagt 26392498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 71
Target Start/End: Complemental strand, 9784840 - 9784797
Alignment:
Q  28 atatatttgtatatgcattatgtggattatataagatgtttaag 71  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  9784840 atatatttgtatatgcattatgtgaattatataagatgtttaag 9784797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 23287534 - 23287480
Alignment:
Q  18 tagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagt 72  Q
    |||||||| |||||||||||||||||| ||||||||||||||| |||| ||||||    
T  23287534 tagtaatgtgatatatttgtatatgcaatatgtggattatatatgatgattaagt 23287480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 195
Target Start/End: Complemental strand, 22841254 - 22841192
Alignment:
Q  135 ctgtgatgtatatttatatttaaataaattatacatgttgctgaatt--cttttcaaaggttg 195  Q
    |||| |||||||||||||||||||||||||||||| |||| ||||||   |||||||||||||    
T  22841254 ctgttatgtatatttatatttaaataaattatacaagttgttgaatttcattttcaaaggttg 22841192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 79 - 174
Target Start/End: Complemental strand, 22860653 - 22860558
Alignment:
Q  79 tgattagttgtgcattttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttg 174  Q
    ||||||||||||||||||||| |||  || |||  |||||||||   | ||||||||||||||||||  || ||||||| ||||| ||||||||||    
T  22860653 tgattagttgtgcattttctggaattattagattgattatgatgatctgttgttgactgtgatgtatgcttttatttaattaaatcatacatgttg 22860558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 84
Target Start/End: Original strand, 43947309 - 43947387
Alignment:
Q  6 atttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtt-taagttgatattgatta 84  Q
    |||| ||||||||| ||||| |||||||| ||||||||| |||||| ||||||| ||||||| ||||||||| |||||||    
T  43947309 atttaatgttgttaataatgtgatatatt-gtatatgcactatgtgaattatatgagatgttgtaagttgatgttgatta 43947387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 68
Target Start/End: Original strand, 20520130 - 20520192
Alignment:
Q  6 atttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgttt 68  Q
    ||||||||| |||| ||||| |||||||||||||||||||||  || |||||||| |||||||    
T  20520130 atttgatgtcgttaataatgtgatatatttgtatatgcattacttgaattatatatgatgttt 20520192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 181
Target Start/End: Complemental strand, 20648423 - 20648321
Alignment:
Q  79 tgattagttgtgcattttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctga 178  Q
    |||||| | |||||||||||| ||| |||||||  |||||||||   | ||||||||||||||||||  ||  |||||| ||||| |||||||||| |||    
T  20648423 tgattaatcgtgcattttctggaattgttggattgattatgatgatctgttgttgactgtgatgtatgctttcatttaattaaatcatacatgttgttga 20648324  T
Q  179 att 181  Q
    |||    
T  20648323 att 20648321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 68
Target Start/End: Complemental strand, 23004909 - 23004871
Alignment:
Q  30 atatttgtatatgcattatgtggattatataagatgttt 68  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  23004909 atatttgtatatgcattatgtggattatatatgatgttt 23004871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 24834804 - 24834873
Alignment:
Q  11 atgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattg 80  Q
    ||||||||||||||| |||||| || ||||||||||||||||| ||| || |||||| || ||| |||||    
T  24834804 atgttgttagtaatgtgatatagttatatatgcattatgtggaatatgtatgatgttgaaattgttattg 24834873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 76
Target Start/End: Complemental strand, 6482899 - 6482868
Alignment:
Q  45 ttatgtggattatataagatgtttaagttgat 76  Q
    ||||||||||||||||||||||||||||||||    
T  6482899 ttatgtggattatataagatgtttaagttgat 6482868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 76
Target Start/End: Complemental strand, 6486366 - 6486335
Alignment:
Q  45 ttatgtggattatataagatgtttaagttgat 76  Q
    ||||||||||||||||||||||||||||||||    
T  6486366 ttatgtggattatataagatgtttaagttgat 6486335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 79 - 174
Target Start/End: Original strand, 20914161 - 20914256
Alignment:
Q  79 tgattagttgtgcattttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttg 174  Q
    |||||| | ||| ||||||||  || |||||||  |||||||||  || ||| |||||||||||||| ||| ||||||| ||||| ||||||||||    
T  20914161 tgattaatggtgtattttctgggattgttggattgattatgatgatttgttgatgactgtgatgtatgtttttatttaattaaatcatacatgttg 20914256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 138 - 169
Target Start/End: Complemental strand, 22109712 - 22109681
Alignment:
Q  138 tgatgtatatttatatttaaataaattataca 169  Q
    ||||||||||||||||||||||||||||||||    
T  22109712 tgatgtatatttatatttaaataaattataca 22109681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 13101577 - 13101643
Alignment:
Q  9 tgatgttgttagtaatgagatatatttgtatatgcattatgtgg-attatataagatgtttaagttg 74  Q
    ||||||||||| | ||| | |||||||| | ||||||||||||| |||||||| |||||||||||||    
T  13101577 tgatgttgttaatgatgtggtatatttgcaaatgcattatgtggaattatatatgatgtttaagttg 13101643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 180
Target Start/End: Complemental strand, 21903449 - 21903409
Alignment:
Q  140 atgtatatttatatttaaataaattatacatgttgctgaat 180  Q
    ||||||| |||||||||||||||||||||| |||| |||||    
T  21903449 atgtataattatatttaaataaattatacaagttgttgaat 21903409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 174
Target Start/End: Original strand, 25365784 - 25365844
Alignment:
Q  114 attatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttg 174  Q
    |||||||||  || ||| ||||||||||||||  |||||| ||||||||| ||||||||||    
T  25365784 attatgatgatttgttgatgactgtgatgtatgcttatatctaaataaatcatacatgttg 25365844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 26903483 - 26903427
Alignment:
Q  11 atgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtt 67  Q
    ||||||||||||||| |||||| || || |||||||||||||| ||| || ||||||    
T  26903483 atgttgttagtaatgtgatatacttatacatgcattatgtggaatatgtatgatgtt 26903427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 191; Significance: 1e-104; HSPs: 2)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 81 - 287
Target Start/End: Original strand, 10033 - 10239
Alignment:
Q  81 attagttgtgcattttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaat 180  Q
    |||| ||||| |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10033 attaattgtgtattttctggaatcattggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaat 10132  T
Q  181 tcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatgttgttgagt 280  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10133 tcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatgttgttgagt 10232  T
Q  281 tgtatgt 287  Q
    |||||||    
T  10233 tgtatgt 10239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 9654 - 9725
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagt 72  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  9654 atatgatttgatgttgttagtaatgagatatatttgtatatgcattgtatggattatataagatgtttaagt 9725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 191; Significance: 1e-104; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 79 - 285
Target Start/End: Complemental strand, 30147173 - 30146967
Alignment:
Q  79 tgattagttgtgcattttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctga 178  Q
    |||||| ||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30147173 tgattaattgtgtattttctggaatcgttggattaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctga 30147074  T
Q  179 attcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatgttgttga 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30147073 attcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatgttgttga 30146974  T
Q  279 gttgtat 285  Q
    |||||||    
T  30146973 gttgtat 30146967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 79 - 287
Target Start/End: Complemental strand, 18212542 - 18212334
Alignment:
Q  79 tgattagttgtgcattttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctga 178  Q
    |||||| ||||| |||||||  |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  18212542 tgattaattgtgtattttcttgaatcattggatcaattataatggattattgttgactgtgatgtatatttatatttaaataaattatacatcttgctga 18212443  T
Q  179 attcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatgttgttga 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18212442 attcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatgttgttga 18212343  T
Q  279 gttgtatgt 287  Q
    |||||||||    
T  18212342 gttgtatgt 18212334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 24047232 - 24047315
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  24047232 atatgatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatgttgatta 24047315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 18212920 - 18212837
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  18212920 atatgatttgatgttgttagtaatgagatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgatta 18212837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 26050408 - 26050479
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagt 72  Q
    |||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  26050408 atatgatttgatgttgatagtaatgtgatatatttgtatatgcattatgtggattatataagatgtttaagt 26050479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 6 - 84
Target Start/End: Complemental strand, 16043195 - 16043117
Alignment:
Q  6 atttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||||||||||||||||||| |||||| |||||||||||||||||| |||||||| ||||||||||||||| |||||||    
T  16043195 atttgatgttgttagtaatgtgatatagttgtatatgcattatgtgaattatatatgatgtttaagttgatgttgatta 16043117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 3 - 84
Target Start/End: Complemental strand, 26789524 - 26789442
Alignment:
Q  3 ataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggatt-atataagatgtttaagttgatattgatta 84  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||    
T  26789524 ataatttgatgttgttaataatgtgatatatttgtatatgcattatgtgaattaatataagatgtttaagttgatgttgatta 26789442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 32306934 - 32307011
Alignment:
Q  7 tttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||||||||| |||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  32306934 tttgatgttgatagtaatgtgatatagttgtatatgcattatgtgaattatataagatgtttaagttgatgttgatta 32307011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 14852808 - 14852888
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattga 81  Q
    |||| |||||| ||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||||| ||||    
T  14852808 atatgatttgaggttgttagtaatgtgatatatttgcatatgcattatgtgaattatataagatgtttaagttgatgttga 14852888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 15041894 - 15041978
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgat-attgatta 84  Q
    |||| |||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||    
T  15041894 atatgatttgatgttcttagtaatgtgatatatttgtatatgcattatgtgaattatataagatgattaagttgatgattgatta 15041978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 116 - 266
Target Start/End: Complemental strand, 15075677 - 15075526
Alignment:
Q  116 tatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaattct-tttcaaaggttgaagtattattaattggatt 214  Q
    ||||||| ||||||| ||  ||| ||| ||||||||||| ||||||||||||| ||||| |||||| | |||||||| ||||||||| | |||||| |||    
T  15075677 tatgatgaattattgatggttgttatgcatatttatatt-aaataaattatacttgttgttgaattttatttcaaagattgaagtatcactaattgaatt 15075579  T
Q  215 gtcgaggtg-aagtcatatttacatatatgcattgatgagtagtggttgtcgt 266  Q
    || |||||| ||||| |||| |||||||||||||| |||||||||||| ||||    
T  15075578 gttgaggtgtaagtcctattcacatatatgcattgttgagtagtggttctcgt 15075526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 15112530 - 15112446
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgat-attgatta 84  Q
    |||| |||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||    
T  15112530 atatgatttgatgtttttagtaatgtgatatatttgtatatgcattatgtgaattatataagatgattaagttgatgattgatta 15112446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 630601 - 630684
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||| |||||| ||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  630601 atatgatttaatgttgatagtaatgtaatatatttgtatatgcattatgtggattatataagatgttaaagttgatgttgatta 630684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 10056826 - 10056743
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||| |||||| ||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  10056826 atatgatttaatgttgatagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgatta 10056743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 23803162 - 23803245
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||| |||||| ||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  23803162 atatgatttaatgttgatagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgatta 23803245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 51463765 - 51463848
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||| |||||| ||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  51463765 atatgatttaatgttgatagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgatta 51463848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 84
Target Start/End: Original strand, 13591864 - 13591942
Alignment:
Q  6 atttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| ||||||||||||||| |||||| |||||||||||||||||| || ||||||||||||||||||||| |||||||    
T  13591864 atttaatgttgttagtaatgtgatatagttgtatatgcattatgtgaatcatataagatgtttaagttgatgttgatta 13591942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 6 - 81
Target Start/End: Complemental strand, 15791957 - 15791882
Alignment:
Q  6 atttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattga 81  Q
    |||||||||||||| ||||| |||||| |||||||||||||||||| |||||| ||||||||||||||||| ||||    
T  15791957 atttgatgttgttaataatgtgatatagttgtatatgcattatgtgaattatacaagatgtttaagttgatgttga 15791882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 17048067 - 17048150
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| ||||||||||| | ||||||  ||||||||||| |||||||||||| |||||||||||||||||||||| | |||||||    
T  17048067 atatgatttgatgttgatggtaatgtaatatatttgtacatgcattatgtgaattatataagatgtttaagttgttgttgatta 17048150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 17333468 - 17333397
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagt 72  Q
    |||| |||| |||||||||||||||  ||||||||||||||||||||||||||||||||| |||| ||||||    
T  17333468 atatgatttaatgttgttagtaatgtaatatatttgtatatgcattatgtggattatatatgatgattaagt 17333397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 8 - 74
Target Start/End: Complemental strand, 40907094 - 40907028
Alignment:
Q  8 ttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttg 74  Q
    |||||||||||||||||| |||||| || ||||||||| |||||||||||||| |||||||||||||    
T  40907094 ttgatgttgttagtaatgtgatatagttatatatgcatgatgtggattatatatgatgtttaagttg 40907028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 7 - 84
Target Start/End: Complemental strand, 40907253 - 40907176
Alignment:
Q  7 tttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    ||||||||||||| | ||| || ||||||||| ||||||||||||||||||||| |||||||| |||||| |||||||    
T  40907253 tttgatgttgttaatgatgtgaaatatttgtaaatgcattatgtggattatatatgatgtttatgttgatgttgatta 40907176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 6 - 84
Target Start/End: Complemental strand, 14825651 - 14825572
Alignment:
Q  6 atttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatg-tttaagttgatattgatta 84  Q
    |||| |||||| ||||||||  |||||||||||||||||||||||| ||||||| ||||| ||||||||||| |||||||    
T  14825651 atttaatgttgatagtaatgtaatatatttgtatatgcattatgtgaattatatgagatgttttaagttgatgttgatta 14825572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 79 - 181
Target Start/End: Original strand, 16228947 - 16229049
Alignment:
Q  79 tgattagttgtgcattttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctga 178  Q
    ||||||||||||||||||||  |||  ||||||  |||||||||   | ||||||||||||||||||| || ||||||| ||||| |||||||||| |||    
T  16228947 tgattagttgtgcattttcttgaattattggattgattatgatgatctgttgttgactgtgatgtatacttttatttaattaaatcatacatgttgttga 16229046  T
Q  179 att 181  Q
    |||    
T  16229047 att 16229049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 12611205 - 12611125
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||| |||||| ||||||||  |||||||||||||||||||   || |||||||||||||||||||||||| |||||||    
T  12611205 atatgatttaatgttgatagtaatgtaatatatttgtatatgcatt---tgaattatataagatgtttaagttgatgttgatta 12611125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 105 - 174
Target Start/End: Complemental strand, 18261623 - 18261554
Alignment:
Q  105 gttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttg 174  Q
    ||||||| | |||||||| ||| ||| |||||||||||||| ||||||||||||||||| ||||||||||    
T  18261623 gttggattacttatgatgaattgttgatgactgtgatgtatgtttatatttaaataaatcatacatgttg 18261554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 105 - 174
Target Start/End: Complemental strand, 18271588 - 18271519
Alignment:
Q  105 gttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttg 174  Q
    ||||||| | |||||||| ||| ||| |||||||||||||| ||||||||||||||||| ||||||||||    
T  18271588 gttggattacttatgatgaattgttgatgactgtgatgtatgtttatatttaaataaatcatacatgttg 18271519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 86 - 174
Target Start/End: Complemental strand, 15546942 - 15546854
Alignment:
Q  86 ttgtgcattttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttg 174  Q
    ||||| |||||||| | | ||||||| || ||||||| ||| ||| |||||||||||||| ||||||||||| ||||| ||||||||||    
T  15546942 ttgtgtattttctggatttgttggattaactatgatgaattgttgatgactgtgatgtatgtttatatttaattaaatcatacatgttg 15546854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 53082084 - 53082166
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatt 83  Q
    |||| |||||||||||||| ||||| ||||||  |||||||||||||  || |||||||| ||||||| || || ||||||||    
T  53082084 atatgatttgatgttgttaataatgtgatataaatgtatatgcattacatgaattatatatgatgtttgagatgttattgatt 53082166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 201
Target Start/End: Complemental strand, 15318283 - 15318222
Alignment:
Q  141 tgtatatttatatttaaataaattatacatgttgctgaa-ttcttttcaaaggttgaagtat 201  Q
    |||||||||||||||||||||| |||||| |||| |||| ||| ||||||||||||| ||||    
T  15318283 tgtatatttatatttaaataaactatacaagttgttgaatttcatttcaaaggttgatgtat 15318222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 80
Target Start/End: Complemental strand, 27996090 - 27996021
Alignment:
Q  11 atgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattg 80  Q
    ||||||||||||||| |||| | || ||||||||||||||||| ||| || |||||| |||||| |||||    
T  27996090 atgttgttagtaatgtgatacaattatatatgcattatgtggaatatgtatgatgttgaagttgttattg 27996021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 174
Target Start/End: Original strand, 53905142 - 53905238
Alignment:
Q  79 tgattagttgtgcatttt-ctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttg 174  Q
    |||||| ||||||||||| ||| ||| |||||||  ||||| |||   | ||| |||||||||||||| |||||| |||||||||| ||||||||||    
T  53905142 tgattaattgtgcatttttctggaattgttggattgattataatgatatgttgatgactgtgatgtatgtttataattaaataaatcatacatgttg 53905238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 74
Target Start/End: Original strand, 4831475 - 4831542
Alignment:
Q  8 ttgatgttgttagtaatgagatatatttgtatatgcattatgtgg-attatataagatgtttaagttg 74  Q
    |||||||||||| | ||| | |||||||| | ||||||||||||| |||||||| |||||||||||||    
T  4831475 ttgatgttgttaatgatgtggtatatttgcaaatgcattatgtggaattatatatgatgtttaagttg 4831542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 74
Target Start/End: Original strand, 4834770 - 4834837
Alignment:
Q  8 ttgatgttgttagtaatgagatatatttgtatatgcattatgtgg-attatataagatgtttaagttg 74  Q
    |||||||||||| | ||| | |||||||| | ||||||||||||| |||||||| |||||||||||||    
T  4834770 ttgatgttgttaatgatgtggtatatttgcaaatgcattatgtggaattatatatgatgtttaagttg 4834837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 138 - 169
Target Start/End: Original strand, 9388195 - 9388226
Alignment:
Q  138 tgatgtatatttatatttaaataaattataca 169  Q
    ||||||||||||||||||||||||||||||||    
T  9388195 tgatgtatatttatatttaaataaattataca 9388226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 138 - 169
Target Start/End: Complemental strand, 13878065 - 13878034
Alignment:
Q  138 tgatgtatatttatatttaaataaattataca 169  Q
    ||||||||||||||||||||||||||||||||    
T  13878065 tgatgtatatttatatttaaataaattataca 13878034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 15365248 - 15365185
Alignment:
Q  11 atgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttg 74  Q
    ||||||||||||||| |||||| || |||||| |||||||||| ||| || |||||| ||||||    
T  15365248 atgttgttagtaatgtgatatagttatatatgaattatgtggaatatgtatgatgttgaagttg 15365185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 287
Target Start/End: Original strand, 27849384 - 27849450
Alignment:
Q  224 aagtcatatttacatatatgcattgatgagtagtggttgtcgttg-atg--ttgttgagttgtatgt 287  Q
    ||||| |||||| |||||||||||||||| ||||| ||||||||| |||  ||||||||||||||||    
T  27849384 aagtcttatttatatatatgcattgatgaatagtgtttgtcgttgtatgcattgttgagttgtatgt 27849450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 72
Target Start/End: Original strand, 26045268 - 26045298
Alignment:
Q  42 gcattatgtggattatataagatgtttaagt 72  Q
    |||||||||||||||||||||||||||||||    
T  26045268 gcattatgtggattatataagatgtttaagt 26045298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 52243131 - 52243185
Alignment:
Q  6 atttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatata 60  Q
    |||||||||||||  ||||| |||||| ||||||||||||||  |||||||||||    
T  52243131 atttgatgttgtttataatgtgatataattgtatatgcattacttggattatata 52243185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 4830971 - 4831020
Alignment:
Q  132 tgactgtgatgtatatttatatttaaataaattatacatgttgctgaatt 181  Q
    |||||||||||||| |||| |||||| ||||| |||||||||| ||||||    
T  4830971 tgactgtgatgtatgtttacatttaattaaatcatacatgttgttgaatt 4831020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 4834266 - 4834315
Alignment:
Q  132 tgactgtgatgtatatttatatttaaataaattatacatgttgctgaatt 181  Q
    |||||||||||||| |||| |||||| ||||| |||||||||| ||||||    
T  4834266 tgactgtgatgtatgtttacatttaattaaatcatacatgttgttgaatt 4834315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 174
Target Start/End: Original strand, 15004896 - 15004965
Alignment:
Q  105 gttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttg 174  Q
    ||||||| | ||||||||  || ||| ||| |||||||||| ||||||||||| ||||| ||||||||||    
T  15004896 gttggattacttatgatgatttgttgatgattgtgatgtatgtttatatttaactaaatcatacatgttg 15004965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 181
Target Start/End: Original strand, 18166163 - 18166216
Alignment:
Q  128 ttgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaatt 181  Q
    ||||||||||||||||||  || ||||||| ||||| |||||||||| ||||||    
T  18166163 ttgttgactgtgatgtatgcttttatttaattaaatcatacatgttgttgaatt 18166216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 80
Target Start/End: Complemental strand, 19738425 - 19738356
Alignment:
Q  11 atgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattg 80  Q
    |||||| ||||||||  ||||| || ||||||||||||||||| ||| || |||||| |||||| |||||    
T  19738425 atgttgatagtaatgttatatagttatatatgcattatgtggaatatgtatgatgttgaagttgttattg 19738356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 287
Target Start/End: Original strand, 2585120 - 2585148
Alignment:
Q  259 gttgtcgttgatgttgttgagttgtatgt 287  Q
    |||||||||||||||||||||||||||||    
T  2585120 gttgtcgttgatgttgttgagttgtatgt 2585148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 287
Target Start/End: Complemental strand, 13446598 - 13446570
Alignment:
Q  259 gttgtcgttgatgttgttgagttgtatgt 287  Q
    |||||||||||||||||||||||||||||    
T  13446598 gttgtcgttgatgttgttgagttgtatgt 13446570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 181
Target Start/End: Complemental strand, 14821679 - 14821603
Alignment:
Q  105 gttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaatt 181  Q
    |||||| |||||||||||  ||  || |||||||||||||| ||||||| ||| ||||| |||| ||||| ||||||    
T  14821679 gttggaccaattatgatgatttgctgatgactgtgatgtatgtttatatctaattaaatcatacgtgttgttgaatt 14821603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 287
Target Start/End: Original strand, 15448329 - 15448357
Alignment:
Q  259 gttgtcgttgatgttgttgagttgtatgt 287  Q
    |||||||||||||||||||||||||||||    
T  15448329 gttgtcgttgatgttgttgagttgtatgt 15448357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 287
Target Start/End: Complemental strand, 27027857 - 27027829
Alignment:
Q  259 gttgtcgttgatgttgttgagttgtatgt 287  Q
    |||||||||||||||||||||||||||||    
T  27027857 gttgtcgttgatgttgttgagttgtatgt 27027829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 189; Significance: 1e-102; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 79 - 287
Target Start/End: Complemental strand, 16372025 - 16371817
Alignment:
Q  79 tgattagttgtgcattttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctga 178  Q
    |||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  16372025 tgattaattgtgtattttctggaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgttga 16371926  T
Q  179 attcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatgttgttga 278  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16371925 attcttttcaaaggttgaagtattattaattgaattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatgttgttga 16371826  T
Q  279 gttgtatgt 287  Q
    |||||||||    
T  16371825 gttgtatgt 16371817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 79 - 287
Target Start/End: Original strand, 20438305 - 20438512
Alignment:
Q  79 tgattagttgtgcattttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctga 178  Q
    |||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||    
T  20438305 tgattaattgtgtattttctggaatcgttggatcaattatgatggattattgttgactgtgatgtatatt-atatttaaataaattatacatgttgttga 20438403  T
Q  179 attcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatgttgttga 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20438404 attcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatgttgttga 20438503  T
Q  279 gttgtatgt 287  Q
    |||||||||    
T  20438504 gttgtatgt 20438512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 79 - 282
Target Start/End: Complemental strand, 29535305 - 29535102
Alignment:
Q  79 tgattagttgtgcattttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctga 178  Q
    |||||| ||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  29535305 tgattaattgtgtattttctggaatcgttggattaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacgtgttgctga 29535206  T
Q  179 attcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatgttgttga 278  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29535205 attcttttcaaatgttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatgttgttga 29535106  T
Q  279 gttg 282  Q
    ||||    
T  29535105 gttg 29535102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 86 - 287
Target Start/End: Complemental strand, 13227110 - 13226909
Alignment:
Q  86 ttgtgcattttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaattcttt 185  Q
    ||||| ||||| || ||||||||||| |||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13227110 ttgtgtattttttggaatcgttggattaattagtatgaattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaattcttt 13227011  T
Q  186 tcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatgttgttgagttgtat 285  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  13227010 tcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttgatgctgttgagttgtat 13226911  T
Q  286 gt 287  Q
    ||    
T  13226910 gt 13226909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 93 - 268
Target Start/End: Original strand, 21986745 - 21986920
Alignment:
Q  93 ttttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaattcttttcaaagg 192  Q
    ||||||| ||| ||||||| |||||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  21986745 ttttctggaattgttggattaattatgatggattattgctggctgtaatgtatatttatatttaaataaattatacatgttgttaaattcttttcaaagg 21986844  T
Q  193 ttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttg 268  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  21986845 ttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagttgttgtcgttg 21986920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 105 - 268
Target Start/End: Original strand, 21745457 - 21745620
Alignment:
Q  105 gttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaattcttttcaaaggttgaagtattat 204  Q
    ||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  21745457 gttggattaataatgatggattattgttggctgtgatgtatatttatatttaaatgaattatacatgttgttgaattcttttcaaaggttgaagtattat 21745556  T
Q  205 taattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttg 268  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  21745557 taattggattgttgaggtgaagtcatatttacatatatgcattgattagtagtggttgtcgttg 21745620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 93 - 268
Target Start/End: Original strand, 21734252 - 21734428
Alignment:
Q  93 ttttctgaaatcgttggatcaattatgatggattattg-ttgactgtgatgtatatttatatttaaataaattatacatgttgctgaattcttttcaaag 191  Q
    ||||||| |||  |||||| |||||| ||||||||||| |||  ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  21734252 ttttctggaatttttggattaattattatggattattgattggttgtgatgtatatttatatttaaataaattatacttgttgttgaattcttttcaaag 21734351  T
Q  192 gttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttg 268  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  21734352 gttgaggtattattaattggattgtcgaggtgaagtcatatttacatatatgcatttatgagtagttgttgtcgttg 21734428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 21043214 - 21043289
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgat 76  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21043214 atatgatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgat 21043289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 7 - 84
Target Start/End: Complemental strand, 20958290 - 20958213
Alignment:
Q  7 tttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  20958290 tttgatgttgttagtaatgtgatatagttgtatatgcattatgtggattatataagatgtttaagttgatgttgatta 20958213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 20437925 - 20438009
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatg-tttaagttgatattgatta 84  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  20437925 atatgatttgatgctgttagtaatgagatatatttgtatatgcattatgtggattatataagatgttttaagttgatgttgatta 20438009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 140 - 266
Target Start/End: Complemental strand, 24475681 - 24475554
Alignment:
Q  140 atgtatatttatatttaaataaattatacatgttgctgaatt-cttttcaaaggttgaagtattattaattggattgtcgaggtg-aagtcatatttaca 237  Q
    ||||||||||||||| ||||||||||||||||||| |||||| | |||||||| || |||||| |||||||| ||| | |||||| |||||||||| |||    
T  24475681 atgtatatttatatt-aaataaattatacatgttgttgaatttcatttcaaagattaaagtatcattaattgaattcttgaggtgtaagtcatattcaca 24475583  T
Q  238 tatatgcattgatgagtagtggttgtcgt 266  Q
    ||||||||||| |||||||||||||||||    
T  24475582 tatatgcattgttgagtagtggttgtcgt 24475554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 28312702 - 28312619
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||    
T  28312702 atatgatttgatgtttttagtaatgagatatatttgtatatacattatgtggattttataagatgtttaagttgatgttgatta 28312619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 22124473 - 22124390
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||||| | |||||||    
T  22124473 atatgatttgatgttgttagtaatgtgatatagttgtatatgcattatgtgaattatataagatgtttaagttgttgttgatta 22124390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 52940810 - 52940893
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||||||||||||||||||| ||| || |||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  52940810 atatgatttgatgttgttagtaatgtgatgtagttgtatatgcattatgtgaattatataagatgtttaagttgatgttgatta 52940893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 47190784 - 47190707
Alignment:
Q  6 atttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatt 83  Q
    |||||||||||||||||||| |||||| |||||||||||||||||  |||||||||||||||||||||||| ||||||    
T  47190784 atttgatgttgttagtaatgtgatatagttgtatatgcattatgtaaattatataagatgtttaagttgatgttgatt 47190707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 13881314 - 13881397
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||| |||||| ||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  13881314 atatgatttaatgttgatagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgatta 13881397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 45574739 - 45574822
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||| |||||| ||||||||  |||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||    
T  45574739 atatgatttaatgttgatagtaatgtaatatatttgtatatgcattatgtgaattatataagatgttaaagttgatgttgatta 45574822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 6 - 72
Target Start/End: Original strand, 21533811 - 21533877
Alignment:
Q  6 atttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagt 72  Q
    |||| |||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  21533811 atttaatgttgatagaaatgtgatatatttgtatatgcattatgtggattatataagatgtttaagt 21533877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 14800690 - 14800634
Alignment:
Q  28 atatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  14800690 atatagttgtatatgcattatgtggattatataagatgtttaagttgatgttgatta 14800634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 14809564 - 14809508
Alignment:
Q  28 atatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  14809564 atatagttgtatatgcattatgtggattatataagatgtttaagttgatgttgatta 14809508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 22130763 - 22130838
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgat 76  Q
    |||| |||| |||||| ||||||||  |||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  22130763 atatgatttaatgttgatagtaatgtaatatatttgtatatgcattatgtgaattatataagatgttaaagttgat 22130838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 27653155 - 27653238
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||| |||||| ||||||||   ||||||||||||||||||||| | |||||||||||||||||||||||| |||||||    
T  27653155 atatgatttaatgttgatagtaatgtattatatttgtatatgcattatgagaattatataagatgtttaagttgatgttgatta 27653238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 48603640 - 48603557
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| ||||||||||| | ||||||  |||||||||||||| ||||||||| |||||||||||||||||||||| | |||||||    
T  48603640 atatgatttgatgttgatggtaatgtaatatatttgtatatacattatgtgaattatataagatgtttaagttgttgttgatta 48603557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 116 - 201
Target Start/End: Original strand, 25092151 - 25092237
Alignment:
Q  116 tatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaatt-cttttcaaaggttgaagtat 201  Q
    ||||||| ||| ||| || ||||  |||||||||||||||||||||||||||||||||| |||||| | ||||||||||||||||||    
T  25092151 tatgatgaattgttgatggctgttttgtatatttatatttaaataaattatacatgttgttgaattacatttcaaaggttgaagtat 25092237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 635915 - 635989
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgat 76  Q
    |||| ||||||||||||||| |||| ||| ||||||||||||||||||||| ||||||||| ||| ||||||||||    
T  635915 atatgatttgatgttgttagcaatgtgat-tatttgtatatgcattatgtgaattatataaaatgcttaagttgat 635989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 84
Target Start/End: Complemental strand, 16372141 - 16372102
Alignment:
Q  45 ttatgtggattatataagatgtttaagttgatattgatta 84  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  16372141 ttatgtggattatataagatgtttaagttgatattgatta 16372102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 71
Target Start/End: Original strand, 41781550 - 41781593
Alignment:
Q  28 atatatttgtatatgcattatgtggattatataagatgtttaag 71  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  41781550 atatatttgtatatgcattatgtgaattatataagatgtttaag 41781593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 76
Target Start/End: Complemental strand, 48520692 - 48520623
Alignment:
Q  8 ttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatg-tttaagttgat 76  Q
    |||||||| | | ||||| |||||| |||||||||||||||||| ||||||||||||| |||||||||||    
T  48520692 ttgatgttataaataatgtgatatagttgtatatgcattatgtgaattatataagatgttttaagttgat 48520623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 79 - 174
Target Start/End: Complemental strand, 23631305 - 23631210
Alignment:
Q  79 tgattagttgtgcatttt-ctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttg 174  Q
    |||||| ||||||||||| ||||| | |||||||  |||||||||  |||||||||||||||||||||  || ||||||| ||||| ||||||||||    
T  23631305 tgattaattgtgcatttttctgaatt-gttggattgattatgatgatttattgttgactgtgatgtatgcttttatttaattaaatcatacatgttg 23631210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 79 - 181
Target Start/End: Original strand, 11140829 - 11140932
Alignment:
Q  79 tgattagttgtgcattttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtat-atttatatttaaataaattatacatgttgctg 177  Q
    ||||||||||||||||||||| |||  ||| ||  |||||||||   | ||||||||||||||||||  ||| ||||||| ||||| |||||||||| ||    
T  11140829 tgattagttgtgcattttctggaattattgaattgattatgatgatctgttgttgactgtgatgtatgctttttatttaattaaatcatacatgttgttg 11140928  T
Q  178 aatt 181  Q
    ||||    
T  11140929 aatt 11140932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 11945626 - 11945571
Alignment:
Q  19 agtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttg 74  Q
    |||||||  |||||||||||||| |||| |||| ||||||||||||||||||||||    
T  11945626 agtaatgtaatatatttgtatatacattctgtgaattatataagatgtttaagttg 11945571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 20329181 - 20329122
Alignment:
Q  18 tagtaatgagatatatttgtatatgcattatgtggattatataagatg-tttaagttgat 76  Q
    ||||||||  |||||||||||||||||||||||  ||||||||||||| |||||||||||    
T  20329181 tagtaatgtaatatatttgtatatgcattatgttaattatataagatgttttaagttgat 20329122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 41049968 - 41050034
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtt 67  Q
    |||| |||||| ||||||| ||||| |||||||||||||||||||||  || |||||||| ||||||    
T  41049968 atatgatttgacgttgttaataatgtgatatatttgtatatgcattacttgaattatatatgatgtt 41050034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 174
Target Start/End: Complemental strand, 21698411 - 21698351
Alignment:
Q  114 attatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttg 174  Q
    |||||||||  || ||||||||||||||||||  |||||||||| ||||| ||||||||||    
T  21698411 attatgatgatttgttgttgactgtgatgtatgcttatatttaattaaatcatacatgttg 21698351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 138 - 169
Target Start/End: Complemental strand, 20901418 - 20901387
Alignment:
Q  138 tgatgtatatttatatttaaataaattataca 169  Q
    ||||||||||||||||||||||||||||||||    
T  20901418 tgatgtatatttatatttaaataaattataca 20901387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 181
Target Start/End: Original strand, 31927149 - 31927244
Alignment:
Q  86 ttgtgcattttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaatt 181  Q
    ||||||||||||||  || ||||||| ||||||  ||  || ||| ||| |||||||||| |||| |||||| ||||| |||||||||| ||||||    
T  31927149 ttgtgcattttctgggattgttggattaattatactgacttgttgatgattgtgatgtatgtttacatttaattaaatcatacatgttgttgaatt 31927244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 74
Target Start/End: Complemental strand, 32649892 - 32649825
Alignment:
Q  8 ttgatgttgttagtaatgagatatatttgtatatgcattatgtgg-attatataagatgtttaagttg 74  Q
    |||||||||||| | ||| | |||||||| | ||||||||||||| |||||||| |||||||||||||    
T  32649892 ttgatgttgttaatgatgtggtatatttgcaaatgcattatgtggaattatatatgatgtttaagttg 32649825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 95 - 174
Target Start/End: Complemental strand, 41312480 - 41312401
Alignment:
Q  95 ttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttg 174  Q
    ||||| ||| |||| || ||||||||||  || | | |||||||||||||| ||||||||||| ||||| ||||||||||    
T  41312480 ttctggaattgttgcattaattatgatgacttgtggatgactgtgatgtatgtttatatttaattaaatcatacatgttg 41312401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 181
Target Start/End: Original strand, 15316382 - 15316435
Alignment:
Q  128 ttgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaatt 181  Q
    ||||||||||||||||||  || ||||||| ||||| |||||||||| ||||||    
T  15316382 ttgttgactgtgatgtatgcttttatttaattaaatcatacatgttgttgaatt 15316435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 177
Target Start/End: Complemental strand, 5380943 - 5380879
Alignment:
Q  113 aattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctg 177  Q
    ||||||||||  || ||| ||||||||||||||  |||||| ||||||||| || ||||||||||    
T  5380943 aattatgatgatttgttgatgactgtgatgtatgcttatatctaaataaatcatgcatgttgctg 5380879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 150; Significance: 3e-79; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 79 - 268
Target Start/End: Original strand, 9059 - 9248
Alignment:
Q  79 tgattagttgtgcattttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctga 178  Q
    |||||| ||||| |||||||||||| ||||||| |||||||||||||||||||||  | ||||||||||||||||||||||||||||||| ||||| |||    
T  9059 tgattaattgtgtattttctgaaattgttggattaattatgatggattattgttggttatgatgtatatttatatttaaataaattatacttgttgttga 9158  T
Q  179 attcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttg 268  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  9159 attcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtagttg 9248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 140; Significance: 2e-73; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 105 - 268
Target Start/End: Complemental strand, 33089200 - 33089037
Alignment:
Q  105 gttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaattcttttcaaaggttgaagtattat 204  Q
    ||||||| |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  33089200 gttggattaattatgatggattattgatggctgtgatgtatatttatatttaaataaattatacatgttgttgaattcttttcaaaggttgaagtattat 33089101  T
Q  205 taattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttg 268  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  33089100 taattgaattgtcgaggtgaagtcatatttacatatatgcattgacgagtagtggttgtcgttg 33089037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 108 - 268
Target Start/End: Original strand, 25624519 - 25624679
Alignment:
Q  108 ggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaattcttttcaaaggttgaagtattattaa 207  Q
    |||| |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  25624519 ggattaattatgatggattattgctggctgtgatgtatatttatatttaaataaattatacatgttgttgaactcttttcaaaggttgaagtattattaa 25624618  T
Q  208 ttggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttg 268  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  25624619 ttggattgtcgaggtgaagtcatatttacatatatgcattgatgaatagtggttgtcgttg 25624679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 103 - 224
Target Start/End: Complemental strand, 44476594 - 44476473
Alignment:
Q  103 tcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaattcttttcaaaggttgaagtatt 202  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44476594 tcgttggatcaattatgatggattattgttgactatgatgtatatttatatttaaataaattatacatgttgctgaattcttttcaaaggttgaagtatt 44476495  T
Q  203 attaattggattgtcgaggtga 224  Q
    |||||||||||||||| |||||    
T  44476494 attaattggattgtcgtggtga 44476473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 103 - 224
Target Start/End: Complemental strand, 44479856 - 44479735
Alignment:
Q  103 tcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaattcttttcaaaggttgaagtatt 202  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44479856 tcgttggatcaattatgatggattattgttgactatgatgtatatttatatttaaataaattatacatgttgctgaattcttttcaaaggttgaagtatt 44479757  T
Q  203 attaattggattgtcgaggtga 224  Q
    |||||||||||||||| |||||    
T  44479756 attaattggattgtcgtggtga 44479735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 114 - 287
Target Start/End: Original strand, 20011982 - 20012159
Alignment:
Q  114 attatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaattcttttcaaaggttgaagtattattaattggat 213  Q
    ||||||||| ||| ||| ||  ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||||| ||    
T  20011982 attatgatgaattgttgatggttgtgatgtatatttatatttaaataaattatacatgttgttaaattcttttcaaaggttgaagtatcattaattgaat 20012081  T
Q  214 tgtcgaggtg-aagtcatatttacatatatgcattgatgagtagtggttgtcgttg-atg--ttgttgagttgtatgt 287  Q
    ||| |||||| |||| |||||||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||    
T  20012082 tgttgaggtgtaagttatatttacatatatgcattgatgagtagtggttgtcgttgtatgcattgttgagttgtatgt 20012159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 27941587 - 27941655
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgttta 69  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  27941587 atatgatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatatgagatgttta 27941655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 6 - 84
Target Start/End: Complemental strand, 37515888 - 37515810
Alignment:
Q  6 atttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| ||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  37515888 atttaatgttgttagtaatgtgatataattgtatatgcattatgtgaattatataagatgtttaagttgatgttgatta 37515810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 17438149 - 17438233
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgat-attgatta 84  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||| |||||||||| ||||||||    
T  17438149 atatgatttgatgttgttagtaatgtgatatatttgtatatgcattatgtgaattatataatatgcttaagttgatgattgatta 17438233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 17086086 - 17086169
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| ||||||||||| |||||||| |||||| |||||||||||||||||| |||||||||||| ||||||||||| |||||||    
T  17086086 atatgatttgatgttgatagtaatgtgatatagttgtatatgcattatgtgaattatataagatatttaagttgatgttgatta 17086169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 17460985 - 17461068
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||| |||||| ||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  17460985 atatgatttaatgttgatagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgatta 17461068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 23659595 - 23659512
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||| |||||| ||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  23659595 atatgatttaatgttgatagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgatta 23659512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 23667997 - 23667922
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgat 76  Q
    |||| |||||| ||||||||||||| |||||||||||||||||||||| || ||||||||||||||||||||||||    
T  23667997 atatgatttgaggttgttagtaatgtgatatatttgtatatgcattatatgaattatataagatgtttaagttgat 23667922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 25484172 - 25484255
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||| |||||| ||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  25484172 atatgatttaatgttgatagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgatta 25484255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 5083086 - 5083170
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgat-attgatta 84  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||| || |||||||||  |||||||||| ||||||||    
T  5083086 atatgatttgatgttgttagtaatgtgatatatttgtatatgcattatgtgaatcatataagatccttaagttgatgattgatta 5083170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 18833750 - 18833674
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatg-tttaagttgat 76  Q
    |||| |||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||| |||||||||||    
T  18833750 atatgatttgatgttgttagtaatgtgatatatgtgtatatgcattatgtgaattatataagatgttttaagttgat 18833674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 19808295 - 19808378
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||| |||||| ||||||||  |||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||    
T  19808295 atatgatttaatgttgatagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttatgttgatgttgatta 19808378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 22237952 - 22238035
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||| |||||| ||||||||   ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  22237952 atatgatttaatgttgatagtaatgtattatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgatta 22238035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 23943926 - 23944009
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| ||||||||||| ||||||||  |||||||||||||||||||||||| ||||| |||||||||||||||| | |||||||    
T  23943926 atatgatttgatgttgatagtaatgtaatatatttgtatatgcattatgtgaattatttaagatgtttaagttgttgttgatta 23944009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 25363135 - 25363218
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| ||||||||||| | ||||||  |||||||||||||||||||||||| |||||||||||||||||||||| | |||||||    
T  25363135 atatgatttgatgttgatggtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgttgttgatta 25363218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 20502034 - 20502107
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttg 74  Q
    |||| |||||||||||||||||||  || |||||||||||||||||||||| ||||||||||||||||| ||||    
T  20502034 atatgatttgatgttgttagtaatatgacatatttgtatatgcattatgtgaattatataagatgtttatgttg 20502107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 14397806 - 14397878
Alignment:
Q  12 tgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    ||||| ||||||||  |||||||||||||||||||||||| |||||||| ||||||||||||| | |||||||    
T  14397806 tgttgatagtaatgtaatatatttgtatatgcattatgtgaattatatatgatgtttaagttgctgttgatta 14397878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 6 - 84
Target Start/End: Complemental strand, 16799670 - 16799591
Alignment:
Q  6 atttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatg-tttaagttgatattgatta 84  Q
    |||| |||||| ||||||||  |||||||||||||||||||||||| | ||||||||||| ||||||||||| |||||||    
T  16799670 atttaatgttgatagtaatgtaatatatttgtatatgcattatgtgaaatatataagatgttttaagttgatgttgatta 16799591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 22253098 - 22253173
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgat 76  Q
    |||| |||||||||| ||||||||| |||| | || |||||||||||||||||| | |||||||||||||||||||    
T  22253098 atatgatttgatgttcttagtaatgtgataaagttatatatgcattatgtggatcacataagatgtttaagttgat 22253173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 22744053 - 22743959
Alignment:
Q  79 tgattagttgtgcattttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgtt 173  Q
    |||||| ||||| |||||||| ||| ||||||| ||||||||||  || ||| |||||||||||||| ||||||| ||| ||||| |||||||||    
T  22744053 tgattaattgtgtattttctggaattgttggattaattatgatgatttgttgatgactgtgatgtatgtttatatctaattaaatcatacatgtt 22743959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 19154818 - 19154902
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgattag 85  Q
    |||| |||| |||||| || |||||  ||||||||||||||||||||| || ||||| |||||||||||||||| | ||||||||    
T  19154818 atatgatttaatgttgatactaatgtaatatatttgtatatgcattatctgaattatttaagatgtttaagttgttgttgattag 19154902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 79 - 174
Target Start/End: Original strand, 21683516 - 21683612
Alignment:
Q  79 tgattagttgtgcatttt-ctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttg 174  Q
    |||||| ||||||||||| ||| ||| |||||||  ||||| |||   | |||||||||||||||||| ||||||||||||||||| ||||||||||    
T  21683516 tgattaattgtgcatttttctggaattgttggattgattataatgacctgttgttgactgtgatgtatgtttatatttaaataaatcatacatgttg 21683612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 79 - 174
Target Start/End: Original strand, 21687865 - 21687961
Alignment:
Q  79 tgattagttgtgcatttt-ctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttg 174  Q
    |||||| ||||||||||| ||| ||| |||||||  ||||| |||   | |||||||||||||||||| ||||||||||||||||| ||||||||||    
T  21687865 tgattaattgtgcatttttctggaattgttggattgattataatgacctgttgttgactgtgatgtatgtttatatttaaataaatcatacatgttg 21687961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 84
Target Start/End: Complemental strand, 22996011 - 22995948
Alignment:
Q  21 taatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    ||||| |||||| ||||||||||||||||||  |||| |||||||||||||||||| |||||||    
T  22996011 taatgtgatatagttgtatatgcattatgtgatttatgtaagatgtttaagttgatgttgatta 22995948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 84
Target Start/End: Complemental strand, 28397732 - 28397654
Alignment:
Q  6 atttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatg-tttaagttgatattgatta 84  Q
    |||| ||||||||| ||||| |||||||| |||||||||||||||| ||||||| ||||| ||||||||||| |||||||    
T  28397732 atttaatgttgttaataatgtgatatatt-gtatatgcattatgtgaattatatgagatgttttaagttgatgttgatta 28397654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 21346193 - 21346239
Alignment:
Q  28 atatatttgtatatgcattatgtggattatataagatgtttaagttg 74  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||    
T  21346193 atatatttgtatatgcattatgtgaattatataagatatttaagttg 21346239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 79 - 181
Target Start/End: Original strand, 21690259 - 21690361
Alignment:
Q  79 tgattagttgtgcattttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctga 178  Q
    ||||||||||||||||||||| |||  || |||  |||||||||   | ||||||||||||||||||  || ||||||| ||||| |||||||||| |||    
T  21690259 tgattagttgtgcattttctggaattattagattgattatgatgatctgttgttgactgtgatgtatgcttttatttaattaaatcatacatgttgttga 21690358  T
Q  179 att 181  Q
    |||    
T  21690359 att 21690361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 81
Target Start/End: Original strand, 22963351 - 22963425
Alignment:
Q  7 tttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattga 81  Q
    |||||||||||| |||||| |||||| ||||||||||||| |||| |||||| || ||||| |||||||| ||||    
T  22963351 tttgatgttgttggtaatgtgatataattgtatatgcattgtgtgaattataaaatatgttaaagttgatgttga 22963425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 68
Target Start/End: Complemental strand, 37116532 - 37116470
Alignment:
Q  6 atttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgttt 68  Q
    |||||||||||||| ||||| |||||||||||||||||||||  || |||||||| |||||||    
T  37116532 atttgatgttgttaataatgtgatatatttgtatatgcattacatgaattatatatgatgttt 37116470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 135 - 266
Target Start/End: Original strand, 22521673 - 22521808
Alignment:
Q  135 ctgtgatgtatatttatatttaaataaattatacatgttgctgaatt--cttttcaaaggttgaagtattattaattggat-tgtcgaggtg-aagtcat 230  Q
    |||| ||||||| |||||||||||||||||||||| |||| ||||||   |||| ||||||||  |||| |||| |||  | ||| |||||| |||||||    
T  22521673 ctgttatgtataattatatttaaataaattatacaagttgttgaatttcatttttaaaggttgttgtatcattagttgactatgttgaggtgtaagtcat 22521772  T
Q  231 atttacatatatgcattgatgagtagtggttgtcgt 266  Q
    ||| | |||||||||||| |||||||  ||||||||    
T  22521773 attcatatatatgcattgttgagtagcagttgtcgt 22521808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 195
Target Start/End: Complemental strand, 15267488 - 15267426
Alignment:
Q  135 ctgtgatgtatatttatatttaaataaattatacatgttgctgaatt--cttttcaaaggttg 195  Q
    |||| |||||||||||||||||||||||||||||| |||| ||||||   |||||||||||||    
T  15267488 ctgttatgtatatttatatttaaataaattatacaagttgttgaatttcattttcaaaggttg 15267426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 84
Target Start/End: Complemental strand, 44476814 - 44476775
Alignment:
Q  45 ttatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  44476814 ttatgtggattatataagatgtttaagttgatgttgatta 44476775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 84
Target Start/End: Complemental strand, 44480076 - 44480037
Alignment:
Q  45 ttatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  44480076 ttatgtggattatataagatgtttaagttgatgttgatta 44480037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 68
Target Start/End: Original strand, 2418811 - 2418873
Alignment:
Q  6 atttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgttt 68  Q
    ||||||||||||||  |||| |||||  |||||||||||||||||| |||||||| |||||||    
T  2418811 atttgatgttgttaacaatgtgatatgattgtatatgcattatgtgaattatatatgatgttt 2418873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 20533352 - 20533414
Alignment:
Q  12 tgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttg 74  Q
    ||||| ||||||||  ||||| ||||||||||||| |||| ||||| ||||||||||||||||    
T  20533352 tgttgatagtaatgtaatataattgtatatgcattttgtgaattatttaagatgtttaagttg 20533414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 68
Target Start/End: Original strand, 35026800 - 35026862
Alignment:
Q  6 atttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgttt 68  Q
    |||||||||||||| ||||| |||||  || ||||||||||||||| |||||||| |||||||    
T  35026800 atttgatgttgttaataatgtgatatgattttatatgcattatgtgaattatatatgatgttt 35026862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 13665189 - 13665258
Alignment:
Q  11 atgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattg 80  Q
    ||||||||||||||| |||||| || ||||||||||||| ||| ||| || |||||| |||||| |||||    
T  13665189 atgttgttagtaatgtgatatagttatatatgcattatgcggaatatgtatgatgttgaagttgttattg 13665258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 13724464 - 13724533
Alignment:
Q  11 atgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattg 80  Q
    ||||||||||||||| |||||| || ||||||||||||| ||| ||| || |||||| |||||| |||||    
T  13724464 atgttgttagtaatgtgatatagttatatatgcattatgcggaatatgtatgatgttgaagttgttattg 13724533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 84
Target Start/End: Original strand, 14103167 - 14103240
Alignment:
Q  11 atgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||||| || ||||| |||||| ||||||| ||||||  || |||||||| ||||||||||||||| |||||||    
T  14103167 atgttgatattaatgtgatataattgtatacgcattacatgaattatatatgatgtttaagttgatgttgatta 14103240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 8728620 - 8728656
Alignment:
Q  45 ttatgtggattatataagatgtttaagttgatattga 81  Q
    |||||||||||||||||||||||||||||||| ||||    
T  8728620 ttatgtggattatataagatgtttaagttgatgttga 8728656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 174
Target Start/End: Original strand, 20005459 - 20005547
Alignment:
Q  86 ttgtgcattttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttg 174  Q
    ||||| ||||||||  || ||||||| ||||||||||  || |||  |||| |||||||| ||||||||||| ||||| ||||||||||    
T  20005459 ttgtgtattttctggcattgttggattaattatgatgacttgttgacgactatgatgtatgtttatatttaattaaatcatacatgttg 20005547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 138 - 169
Target Start/End: Original strand, 15003868 - 15003899
Alignment:
Q  138 tgatgtatatttatatttaaataaattataca 169  Q
    ||||||||||||||||||||||||||||||||    
T  15003868 tgatgtatatttatatttaaataaattataca 15003899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 17439438 - 17439505
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgttt 68  Q
    |||| |||| |||||| || ||||| |||||||||||||||||||||  || |||||||| |||||||    
T  17439438 atatgatttaatgttgataataatgtgatatatttgtatatgcattacatgaattatatatgatgttt 17439505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 37 - 76
Target Start/End: Original strand, 18024465 - 18024504
Alignment:
Q  37 tatatgcattatgtggattatataagatgtttaagttgat 76  Q
    |||||||||||| ||||||||| |||||||||||||||||    
T  18024465 tatatgcattatatggattatacaagatgtttaagttgat 18024504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 287
Target Start/End: Complemental strand, 19882108 - 19882080
Alignment:
Q  259 gttgtcgttgatgttgttgagttgtatgt 287  Q
    |||||||||||||||||||||||||||||    
T  19882108 gttgtcgttgatgttgttgagttgtatgt 19882080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 79 - 268
Target Start/End: Complemental strand, 26645 - 26456
Alignment:
Q  79 tgattagttgtgcattttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctga 178  Q
    |||||| ||||| ||| |||| ||| ||||||| ||||||||||||||||||||| |||||| | ||||||||||||||||| ||||||||| ||| |||    
T  26645 tgattaattgtgtattctctggaattgttggattaattatgatggattattgttggctgtgaaggatatttatatttaaatagattatacatattgttga 26546  T
Q  179 attcttttcaaaggttgaagtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttg 268  Q
    || ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26545 atccttttcaaaggttggggtattattaattggattgtcgaggtgaagtcatatttacatatatgcattgatgagtagtggttgtcgttg 26456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0669 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: scaffold0669
Description:

Target: scaffold0669; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 113 - 268
Target Start/End: Original strand, 1582 - 1738
Alignment:
Q  113 aattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaattcttttcaaaggttgaagtattattaattgga 212  Q
    |||||||||||||| ||| ||  ||||| ||||||||||||||||| ||||||||||||||| |||||||||||| || ||| |||||| |||||||| |    
T  1582 aattatgatggattgttgatggttgtgacgtatatttatatttaaacaaattatacatgttgttgaattcttttcgaatgtttaagtatcattaattgaa 1681  T
Q  213 ttgtcgaggtg-aagtcatatttacatatatgcattgatgagtagtggttgtcgttg 268  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  1682 ttgttgaggtgtaagtcatatttacatatatgcattgatgagtagtggctgtcgttg 1738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 72; Significance: 9e-33; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 135 - 268
Target Start/End: Complemental strand, 770 - 635
Alignment:
Q  135 ctgtgatgtatatttatatttaaataaattatacatgttgctgaa-ttcttttcaaaggttgaagtattattaattggattgtcgaggtg-aagtcatat 232  Q
    |||| ||||||||||||||||||||||||||||||||||| |||| ||| |||||||| ||||||||| |||||||| ||||| || ||| |||||||||    
T  770 ctgttatgtatatttatatttaaataaattatacatgttgttgaatttcatttcaaagattgaagtatcattaattgaattgttgacgtgtaagtcatat 671  T
Q  233 ttacatatatgcattgatgagtagtggttgtcgttg 268  Q
    | ||||||||||| || ||||| |||||||||||||    
T  670 tcacatatatgcaatgttgagtcgtggttgtcgttg 635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 72; Significance: 9e-33; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 133104 - 133021
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  133104 atatgatttgatgttgttagtaataagatatatttgtatatgcattatgtggattatataagatgtttaagttgatgttgatta 133021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 29378 - 29325
Alignment:
Q  12 tgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatg 65  Q
    ||||| ||||||||  |||||||||||||||||||||||| | ||| |||||||    
T  29378 tgttgatagtaatgtaatatatttgtatatgcattatgtgaagtatttaagatg 29325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 69; Significance: 5e-31; HSPs: 2)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 4056 - 3972
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatg-tttaagttgatattgatta 84  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  4056 atatgatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgttttaagttgatgttgatta 3972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 79 - 181
Target Start/End: Complemental strand, 18845 - 18743
Alignment:
Q  79 tgattagttgtgcattttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctga 178  Q
    ||||||||||||||||||||| |||  || |||  |||||||||   | ||||||||||||||||||  || ||||||| ||||| |||||||||| |||    
T  18845 tgattagttgtgcattttctggaattatttgattgattatgatgatctgttgttgactgtgatgtatgcttttatttaattaaatcatacatgttgttga 18746  T
Q  179 att 181  Q
    |||    
T  18745 att 18743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 2082 - 1999
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  2082 atatgatttgatgttgttagtaatgtgatatagttgtatatgcattatgtggattatataagatgtttaagttgatgttgatta 1999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 835 - 752
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  835 atatgatttgatgttgttagtaatgtgatatagttgtatatgcattatgtggattatataagatgtttaagttgatgttgatta 752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 60652 - 60706
Alignment:
Q  6 atttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatata 60  Q
    |||||||||||||| | ||| |||||||||||||||||||||  || ||||||||    
T  60652 atttgatgttgttaattatgtgatatatttgtatatgcattacttgaattatata 60706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1783 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold1783
Description:

Target: scaffold1783; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 605 - 533
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagtt 73  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  605 atataatttgatgttgttagtaatgtgatatatttgtatatgcattatgtgaattatataagatgtttaagtt 533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 140 - 266
Target Start/End: Original strand, 6897 - 7025
Alignment:
Q  140 atgtatatttatatttaaataaattatacatgttgctgaa-ttcttttcaaaggttgaagtattattaattggattgtcgaggtg-aagtcatatttaca 237  Q
    ||||||||||||| ||||||||||||||||||||| |||| ||| |||||||||||||||||| |||| ||| ||||| |||||| |||||||||| | |    
T  6897 atgtatatttatacttaaataaattatacatgttgttgaatttcatttcaaaggttgaagtatcattagttgaattgttgaggtgtaagtcatattcata 6996  T
Q  238 tatatgcattgatgagtagtggttgtcgt 266  Q
    ||||||||||| |||||||  ||||||||    
T  6997 tatatgcattgttgagtagcagttgtcgt 7025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 62; Significance: 8e-27; HSPs: 2)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 136 - 266
Target Start/End: Complemental strand, 31800 - 31667
Alignment:
Q  136 tgtgatgtatatttatatttaaataaattatacatgttgctgaa-ttcttttcaaaggttgaagtattattaattggattg-tcgaggtg-aagtcatat 232  Q
    |||| |||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||||| |||| ||| | || | |||||| |||||||||    
T  31800 tgtgttgtatatttatatttaaataaattatacatgttgttgaatttcatttcaaaggttgaagtatcattagttgaagtgttggaggtgtaagtcatat 31701  T
Q  233 ttacatatatgcattgatgagtagtggttgtcgt 266  Q
    | | |||||||||||| |||||||| ||||||||    
T  31700 tcatatatatgcattgttgagtagtagttgtcgt 31667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 135 - 266
Target Start/End: Complemental strand, 21134 - 21000
Alignment:
Q  135 ctgtgatgtatatttatatttaaataaattatacatgttgctgaa-ttcttttcaaaggttgaagtattattaattggattg-tcgaggtg-aagtcata 231  Q
    ||||| |||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||||| |||| ||| | || | |||||| ||||||||    
T  21134 ctgtgttgtatatttatatttaaataaattatacatgttgttgaatttcatttcaaaggttgaagtatcattagttgaagtgttggaggtgtaagtcata 21035  T
Q  232 tttacatatatgcattgatgagtagtggttgtcgt 266  Q
    || | |||||||||||| || ||||| ||||||||    
T  21034 ttcatatatatgcattgttgggtagtagttgtcgt 21000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 62; Significance: 8e-27; HSPs: 2)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 36368 - 36295
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttg 74  Q
    |||| |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  36368 atatgatttgatgttgttagtaatgtgatatagttgtatatgcattatgtggattatataagatgtttaagttg 36295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 10017 - 10100
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||| |||||| ||||||||  |||||||||||||| |||| |||| ||||||||||||||||||| |||| |||||||    
T  10017 atatgatttaatgttgatagtaatgtaatatatttgtatatacattctgtgaattatataagatgtttaagatgatgttgatta 10100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1539 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold1539
Description:

Target: scaffold1539; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 1127 - 1043
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgat-attgatta 84  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||    
T  1127 atatgatttgatgttgttagtaatgtgatatatttgtatatgcattatgtgaattatataagatgcttaagttgatgattgatta 1043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 2603 - 2687
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgat-attgatta 84  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||    
T  2603 atatgatttgatgttgttagtaatgtgatatatttgtatatgcattatgtgaattatataagatgcttaagttgatgattgatta 2687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 3145 - 3061
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgat-attgatta 84  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||    
T  3145 atatgatttgatgttgttagtaatgtgatatatttgtatatgcattatgtgaattatataagatgcttaagttgatgattgatta 3061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 7618 - 7534
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgat-attgatta 84  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||    
T  7618 atatgatttgatgttgttagtaatgtgatatatttgtatatgcattatgtgaattatataagatgcttaagttgatgattgatta 7534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 14737 - 14653
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgat-attgatta 84  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||    
T  14737 atatgatttgatgttgttagtaatgtgatatatttgtatatgcattatgtgaattatataagatgcttaagttgatgattgatta 14653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 142770 - 142686
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgat-attgatta 84  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||    
T  142770 atatgatttgatgttgttagtaatgtgatatatttgtatatgcattatgtgaattatataagatgcttaagttgatgattgatta 142686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 28 - 84
Target Start/End: Original strand, 169709 - 169765
Alignment:
Q  28 atatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  169709 atatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgatta 169765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 18100 - 18175
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgat 76  Q
    |||| ||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  18100 atatgatttgatattgttagtaatgtgatatagttgtatatgcattatgtggattatataagatgtttaagttgat 18175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0485 (Bit Score: 57; Significance: 8e-24; HSPs: 2)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 8 - 76
Target Start/End: Complemental strand, 10344 - 10276
Alignment:
Q  8 ttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgat 76  Q
    |||||||||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||    
T  10344 ttgatgttgttagtaatgtgatgtagttgtatatgcattatgtggattatataagatgtttaagttgat 10276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0485; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 135 - 266
Target Start/End: Complemental strand, 3056 - 2921
Alignment:
Q  135 ctgtgatgtatatttatatttaaataaattatacatgttgctgaatt--cttttcaaaggttgaagtattattaattggat--tgtcgaggtg-aagtca 229  Q
    |||| |||||||||||||||||||||||||||||| |||| ||||||   |||||||||||||  |||| |||| || |||  ||| |||||| ||||||    
T  3056 ctgttatgtatatttatatttaaataaattatacaagttgttgaatttcattttcaaaggttgttgtatcattagtt-gatcatgttgaggtgtaagtca 2958  T
Q  230 tatttacatatatgcattgatgagtagtggttgtcgt 266  Q
    |||||| ||||||||| || |||||||  ||||||||    
T  2957 tatttatatatatgcactgttgagtagcagttgtcgt 2921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 55617 - 55697
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattga 81  Q
    |||| |||||| ||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||||| ||||    
T  55617 atatgatttgaggttgttagtaatgtgatatatttgcatatgcattatgtgaattatataagatgtttaagttgatgttga 55697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2080 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold2080
Description:

Target: scaffold2080; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 9 - 84
Target Start/End: Original strand, 701 - 776
Alignment:
Q  9 tgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||||||| |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| | |||||||    
T  701 tgatgttgatagtaatgtgatatatttgtatatgcattatgtgaattatataagatgtttaagttgttgttgatta 776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 24530 - 24613
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||| |||||| ||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  24530 atatgatttaatgttgatagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgatta 24613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 84
Target Start/End: Original strand, 221145 - 221222
Alignment:
Q  6 atttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||  ||||||||||| |||||||    
T  221145 atttgatgttgttagtaatgtgatatagttgtatatgcattatgtggattatataaga-ctttaagttgatgttgatta 221222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1336 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold1336
Description:

Target: scaffold1336; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 166 - 266
Target Start/End: Original strand, 660 - 761
Alignment:
Q  166 tacatgttgctgaattcttttcaaaggttgaagtattattaattggattgtcgaggtg-aagtcatatttacatatatgcattgatgagtagtggttgtc 264  Q
    ||||||||| |||||||||||||||||||||||||| |||| ||| ||||| | |||| |||||||||  ||||||||| |||| |||||||||||||||    
T  660 tacatgttgttgaattcttttcaaaggttgaagtatcattagttgaattgttggggtgtaagtcatatacacatatatgtattgttgagtagtggttgtc 759  T
Q  265 gt 266  Q
    ||    
T  760 gt 761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 54; Significance: 5e-22; HSPs: 2)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 11 - 84
Target Start/End: Complemental strand, 15920 - 15847
Alignment:
Q  11 atgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||||| ||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  15920 atgttgatagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgatta 15847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 181
Target Start/End: Complemental strand, 25886 - 25833
Alignment:
Q  128 ttgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaatt 181  Q
    ||||||||||||||||||  || ||||||| ||||| |||||||||| ||||||    
T  25886 ttgttgactgtgatgtatgcttttatttaattaaatcatacatgttgttgaatt 25833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 29356 - 29436
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattga 81  Q
    |||| |||||| ||||||||||||| |||||||||| ||||| |||||||| |||||||||||||||||||||||| ||||    
T  29356 atatgatttgaggttgttagtaatgtgatatatttgcatatgtattatgtgaattatataagatgtttaagttgatgttga 29436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 74
Target Start/End: Complemental strand, 30515 - 30447
Alignment:
Q  6 atttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttg 74  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||| ||||||||    
T  30515 atttgatgttgttagtaatgtgatatatttgtatatgcattatgtgaattatataaaatgcttaagttg 30447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1439 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold1439
Description:

Target: scaffold1439; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 371 - 288
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||| |||||| ||||||||  |||||||||||||||||||||||| ||||||||||||||||||| |||| |||||||    
T  371 atatgatttaatgttgatagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagctgatgttgatta 288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0780 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0780
Description:

Target: scaffold0780; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 3260 - 3343
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||| |||||| ||||||||  |||||||||||||||||||||||| ||||||||||||||||||||| || |||||||    
T  3260 atatcatttaatgttgatagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttaatgttgatta 3343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 6092 - 6175
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| ||||||||||| | ||||||  |||||||||||||||||||||||| |||||||||||||||||||||| | |||||||    
T  6092 atatgatttgatgttgatggtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgttgttgatta 6175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0436 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 8219 - 8136
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||||||||  ||||||||| |||||| |||||||||||||||||| |||||||| ||||||||||||||| |||||||    
T  8219 atatgatttgatgtcattagtaatgtgatatagttgtatatgcattatgtgaattatatatgatgtttaagttgatgttgatta 8136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 215 - 132
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||| |||||| ||||||||  |||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||    
T  215 atatgatttaatgttgatagtaatgtaatatatttgtatatgcattatgtgaattatataagatgttaaagttgatgttgatta 132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 52; Significance: 8e-21; HSPs: 2)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 17690 - 17607
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||||| |||||| |||||| |||||| |||||||||| ||||||| |||||||||||||||||||||||| |||||||    
T  17690 atatgatttgaagttgttggtaatgtgatatagttgtatatgccttatgtgaattatataagatgtttaagttgatgttgatta 17607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 85
Target Start/End: Original strand, 20154 - 20227
Alignment:
Q  12 tgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgattag 85  Q
    ||||| ||||||||  |||||||| |||||||| |||||| ||||||||  |||||||||||| | ||||||||    
T  20154 tgttgatagtaatgtaatatatttttatatgcactatgtgaattatatataatgtttaagttgttgttgattag 20227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 347 - 264
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||| |||||| ||||||||  ||||||||||||||||||||| || |||||||||||||||||||||||| |||||||    
T  347 atatgatttaatgttgatagtaatgtaatatatttgtatatgcattatttgaattatataagatgtttaagttgatgttgatta 264  T

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Target: scaffold0125 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 1807 - 1890
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||| |||||| ||||||||  |||||||||||||||||||||||| || ||||||||||||||||||||| |||||||    
T  1807 atatgatttaatgttgatagtaatgtaatatatttgtatatgcattatgtgaatcatataagatgtttaagttgatgttgatta 1890  T

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Target: scaffold0023 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 105268 - 105193
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgat 76  Q
    |||| |||||||||||||||||||| |||||||||||||||||||| | || |||||||||||||||||| |||||    
T  105268 atatgatttgatgttgttagtaatgtgatatatttgtatatgcattttttgaattatataagatgtttaatttgat 105193  T

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Target: scaffold0011 (Bit Score: 52; Significance: 8e-21; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 126143 - 126060
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| ||||||||||| | ||||||  |||||||||||||||||||||||| |||||||||||||||||||||| | |||||||    
T  126143 atatgatttgatgttgatggtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgttgttgatta 126060  T

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Target: scaffold0011; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 135 - 206
Target Start/End: Original strand, 21550 - 21622
Alignment:
Q  135 ctgtgatgtatatttatatttaaataaattatacatgttgctgaa-ttcttttcaaaggttgaagtattatta 206  Q
    |||| |||||||||||||||||||||||||||||| |||| |||| ||| ||||||||||||| |||| ||||    
T  21550 ctgttatgtatatttatatttaaataaattatacaagttgttgaatttcatttcaaaggttgatgtatcatta 21622  T

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Target: scaffold0011; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 181
Target Start/End: Complemental strand, 154481 - 154379
Alignment:
Q  79 tgattagttgtgcattttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctga 178  Q
    ||||||||||||||||||||| |||  ||| ||  |||||||||   | ||||||||||||||||||  || ||||||| ||| | ||| |||||| |||    
T  154481 tgattagttgtgcattttctggaattattgaattgattatgatgatctgttgttgactgtgatgtatgcttttatttaattaagtcataaatgttgttga 154382  T
Q  179 att 181  Q
    |||    
T  154381 att 154379  T

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Target: scaffold0004 (Bit Score: 52; Significance: 8e-21; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 135 - 275
Target Start/End: Complemental strand, 384459 - 384314
Alignment:
Q  135 ctgtgatgtatatttatatttaaataaattatacatgttgctgaa-ttcttttcaaaggttgaagtattattaattggattgtcgaggtg-aagtcatat 232  Q
    |||| ||||||||||||| ||||||||||||||||||||| |||| ||| |||||||| ||||||||| |||| ||| |  || |||||| |||||||||    
T  384459 ctgttatgtatatttatacttaaataaattatacatgttgttgaatttcatttcaaagattgaagtatcattagttgaagggttgaggtgtaagtcatat 384360  T
Q  233 ttacatatatgcatt---gatgagtagtggttgtcgttgatgttgt 275  Q
    | | |||||||||||   ||  |||||||||||||||| |||||||    
T  384359 tcatatatatgcattgtcgagtagtagtggttgtcgttcatgttgt 384314  T

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Target: scaffold0004; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 81
Target Start/End: Complemental strand, 332498 - 332423
Alignment:
Q  6 atttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattga 81  Q
    |||| ||||||  ||||||| ||||||||||||||||||||||||| |||||| |  |||||||||||||| ||||    
T  332498 attttatgttgaaagtaatgtgatatatttgtatatgcattatgtgaattataaattatgtttaagttgatgttga 332423  T

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Target: scaffold0004; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 287
Target Start/End: Original strand, 205274 - 205302
Alignment:
Q  259 gttgtcgttgatgttgttgagttgtatgt 287  Q
    |||||||||||||||||||||||||||||    
T  205274 gttgtcgttgatgttgttgagttgtatgt 205302  T

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Target: scaffold0054 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 6 - 84
Target Start/End: Original strand, 75766 - 75844
Alignment:
Q  6 atttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||||||||||||||||||| |||| | |||||| |||||||||||||||||||| ||||||||||||| | |||||||    
T  75766 atttgatgttgttagtaatgtgataaaattgtatttgcattatgtggattatatatgatgtttaagttgttgttgatta 75844  T

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Target: scaffold0054; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 171
Target Start/End: Original strand, 61852 - 61936
Alignment:
Q  86 ttgtgcattttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatg 171  Q
    ||||| |||||||| ||| | ||||| ||||||||||  || ||| |||||||||||||| |||||| |||| ||||| |||||||    
T  61852 ttgtgtattttctggaattgctggattaattatgatgacttgttgatgactgtgatgtatgtttata-ttaattaaatcatacatg 61936  T

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Target: scaffold0394 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 84
Target Start/End: Complemental strand, 12313 - 12240
Alignment:
Q  11 atgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||||| ||||||||  |||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||    
T  12313 atgttgatagtaatgtaatatatttgtatatgcattatgtgaattatataagatgttcaagttgatgttgatta 12240  T

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Target: scaffold0253 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0253
Description:

Target: scaffold0253; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 116 - 266
Target Start/End: Complemental strand, 5570 - 5417
Alignment:
Q  116 tatgatggattattgttgactg-tgatgtatatttatatttaaataaattatacatgttgctgaa-ttcttttcaaaggttgaagtattattaattggat 213  Q
    ||||||| ||||||| || ||| | |||||||||||||  |||||||||||||||||||| |||| ||| |||||||  |||  ||||||||||||| ||    
T  5570 tatgatgaattattgatggctgattatgtatatttataactaaataaattatacatgttgttgaatttcatttcaaatattggtgtattattaattgaat 5471  T
Q  214 tgtcgaggtg-aagtcatatttacatatatgcattgatgagtagtggttgtcgt 266  Q
     || |||||| |||||||||| | |||||||||||| |||||| || |||||||    
T  5470 cgttgaggtgtaagtcatattcatatatatgcattgttgagtattgattgtcgt 5417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 26016 - 26093
Alignment:
Q  6 atttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatt 83  Q
    |||| ||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||| |||||| | ||||||    
T  26016 atttaatgttgttagtaatgtgatataattgtatatgcattatgtgaattatataagatgttcaagttgttgttgatt 26093  T

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Target: scaffold0046; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 11 - 83
Target Start/End: Original strand, 16861 - 16933
Alignment:
Q  11 atgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatt 83  Q
    ||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||| |||||| | ||||||    
T  16861 atgttgttagtaatgtgatataattgtatatgcattatgtgaattatataagatgttcaagttgttgttgatt 16933  T

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Target: scaffold0028 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 136 - 200
Target Start/End: Original strand, 92487 - 92551
Alignment:
Q  136 tgtgatgtatatttatatttaaataaattatacatgttgctgaattcttttcaaaggttgaagta 200  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| ||||    
T  92487 tgtgatgtatatttatatctaaataaattatacatgttgttgaattctttttaaaggttgtagta 92551  T

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Target: scaffold0096 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 21354 - 21271
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| ||||||||||| | ||||||  |||||||||||||||||||||||  |||||||||||||||||||||| | |||||||    
T  21354 atatgatttgatgttgatggtaatgtaatatatttgtatatgcattatgttaattatataagatgtttaagttgttgttgatta 21271  T

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Target: scaffold0064 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 79 - 146
Target Start/End: Complemental strand, 68215 - 68148
Alignment:
Q  79 tgattagttgtgcattttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtata 146  Q
    |||||| ||||| |||||||| ||||||||||| |||||||||||||||||||||| |||||||||||    
T  68215 tgattaattgtgtattttctggaatcgttggattaattatgatggattattgttgattgtgatgtata 68148  T

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Target: scaffold0032 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 67448 - 67365
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||| |||||| ||||||||  |||||||| ||||||||||||||| ||| |||||||||||||||||||| |||||||    
T  67448 atatgatttaatgttgatagtaatgtaatatatttttatatgcattatgtgaattgtataagatgtttaagttgatgttgatta 67365  T

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Target: scaffold0018 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 20938 - 20855
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| ||||||||||  | ||||||  |||||||||||||||||||||||| |||||||||||||||||||||| | |||||||    
T  20938 atatgatttgatgttaatggtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgttgttgatta 20855  T

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Target: scaffold1419 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold1419
Description:

Target: scaffold1419; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 6 - 76
Target Start/End: Complemental strand, 206 - 136
Alignment:
Q  6 atttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgat 76  Q
    |||||||||||||| ||||| |||||| |||||||||||||||||| ||| |||| |||||||||||||||    
T  206 atttgatgttgttaataatgtgatataattgtatatgcattatgtgaattttatatgatgtttaagttgat 136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0750 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0750
Description:

Target: scaffold0750; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 6 - 72
Target Start/End: Complemental strand, 3778 - 3712
Alignment:
Q  6 atttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagt 72  Q
    |||| |||||| ||||||||  ||||||||||||||| |||||||||||||||||||||||||||||    
T  3778 atttaatgttgatagtaatgtaatatatttgtatatgtattatgtggattatataagatgtttaagt 3712  T

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Target: scaffold0639 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0639
Description:

Target: scaffold0639; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 7435 - 7505
Alignment:
Q  15 tgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgat-attgatta 84  Q
    ||||||||||| ||||||||||| ||||||||||||| ||||||||||||| |||||||||| ||||||||    
T  7435 tgttagtaatgtgatatatttgtgtatgcattatgtgaattatataagatgcttaagttgatgattgatta 7505  T

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Target: scaffold0914 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0914
Description:

Target: scaffold0914; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 1890 - 1806
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggatta-tataagatgtttaagttgatattgatta 84  Q
    ||||| ||||||||||||| | ||| ||||||||||||||||||||||||| |||| ||||||  |||||||||||| |||||||    
T  1890 atatagtttgatgttgttaatgatgtgatatatttgtatatgcattatgtgaattattataaggagtttaagttgatgttgatta 1806  T

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Target: scaffold0117 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 39429 - 39357
Alignment:
Q  12 tgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    ||||| ||||||||  |||||||||||||||||||||||| |||||||| ||||||||||||| | |||||||    
T  39429 tgttgatagtaatgtaatatatttgtatatgcattatgtgaattatatatgatgtttaagttgttgttgatta 39357  T

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Target: scaffold0117; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 180
Target Start/End: Complemental strand, 33969 - 33929
Alignment:
Q  140 atgtatatttatatttaaataaattatacatgttgctgaat 180  Q
    ||||||| |||||||||||||||||||||| |||| |||||    
T  33969 atgtataattatatttaaataaattatacaagttgttgaat 33929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 1040 - 957
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| ||||||||||| | ||||||  |||||||| |||||| |||||||| |||||||||||||||||||||| | |||||||    
T  1040 atatgatttgatgttgatggtaatgtaatatatttatatatgtattatgtgaattatataagatgtttaagttgttgttgatta 957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 6 - 84
Target Start/End: Original strand, 19584 - 19663
Alignment:
Q  6 atttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataaga-tgtttaagttgatattgatta 84  Q
    ||||||||||| || ||||| ||||||||||||||||||||||||| ||||||| ||| | ||||||||||| |||||||    
T  19584 atttgatgttgataataatgtgatatatttgtatatgcattatgtgaattatatgagattttttaagttgatgttgatta 19663  T

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Target: scaffold0053 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 79 - 174
Target Start/End: Original strand, 46554 - 46649
Alignment:
Q  79 tgattagttgtgcattttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttg 174  Q
    |||||| ||||| ||||| |||||| ||||||| ||||||||||  || ||| ||| |||||||||| ||||||||||| ||||| ||||||||||    
T  46554 tgattaattgtgtattttatgaaattgttggattaattatgatgatttgttgatgattgtgatgtatgtttatatttaattaaatcatacatgttg 46649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 6 - 84
Target Start/End: Complemental strand, 22461 - 22382
Alignment:
Q  6 atttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatg-tttaagttgatattgatta 84  Q
    |||| |||||| ||||||||  |||||||||||||||||||||||| ||||||| ||||| ||||||||||| |||||||    
T  22461 atttaatgttgatagtaatgtaatatatttgtatatgcattatgtgaattatatgagatgttttaagttgatgttgatta 22382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 11323 - 11260
Alignment:
Q  11 atgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttg 74  Q
    ||||| ||||||||| |||||| ||||||||||||||| ||||||||||| |||||||||||||    
T  11323 atgttattagtaatgtgatatagttgtatatgcattatttggattatatatgatgtttaagttg 11260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 22423 - 22360
Alignment:
Q  11 atgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttg 74  Q
    ||||| ||||||||| |||||| ||||||||||||||| ||||||||||| |||||||||||||    
T  22423 atgttattagtaatgtgatatagttgtatatgcattatatggattatatatgatgtttaagttg 22360  T

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Target: scaffold0005 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 6 - 84
Target Start/End: Original strand, 14058 - 14137
Alignment:
Q  6 atttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatg-tttaagttgatattgatta 84  Q
    |||| |||||| ||||||||  |||||||||||||||||||||||| ||||||| ||||| ||||||||||| |||||||    
T  14058 atttaatgttgatagtaatgtaatatatttgtatatgcattatgtgaattatatgagatgttttaagttgatgttgatta 14137  T

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Target: scaffold0005; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 181
Target Start/End: Original strand, 18030 - 18106
Alignment:
Q  105 gttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaatt 181  Q
    |||||| |||||||||||  ||  || |||||||||||||| ||||||| ||| ||||| |||| ||||| ||||||    
T  18030 gttggaccaattatgatgatttgctgatgactgtgatgtatgtttatatctaattaaatcatacgtgttgttgaatt 18106  T

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Target: scaffold0051 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 31300 - 31238
Alignment:
Q  12 tgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttg 74  Q
    ||||| ||||||||  |||||||||||||||||||||||| |||||||| |||||||||||||    
T  31300 tgttgatagtaatgtaatatatttgtatatgcattatgtgaattatatatgatgtttaagttg 31238  T

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Target: scaffold0037 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 82341 - 82254
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcat----tatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||| |||||| ||||||||  ||||||||||||||||||    |||||| |||||||||||||||||||||||| |||||||    
T  82341 atatgatttaatgttgatagtaatgtaatatatttgtatatgcatgcattatgtgaattatataagatgtttaagttgatgttgatta 82254  T

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Target: scaffold0014 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 206470 - 206528
Alignment:
Q  14 ttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagt 72  Q
    ||||||||||||  ||||||||||||||||||||||||||||||| |||||| ||||||    
T  206470 ttgttagtaatgtaatatatttgtatatgcattatgtggattatacaagatgattaagt 206528  T

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Target: scaffold0708 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0708
Description:

Target: scaffold0708; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 2359 - 2432
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttg 74  Q
    |||| |||| |||||| |||||||   |||||||||||||||||||||||| ||||| ||||||||||||||||    
T  2359 atatgatttaatgttgatagtaatttaatatatttgtatatgcattatgtgaattatttaagatgtttaagttg 2432  T

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Target: scaffold0072 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 57999 - 57922
Alignment:
Q  6 atttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatt 83  Q
    |||| ||||||||||||||| |||||| |||||||||||||||||| ||||| ||| ||||| |||||| | ||||||    
T  57999 atttaatgttgttagtaatgtgatataattgtatatgcattatgtgaattatttaaaatgttcaagttgttgttgatt 57922  T

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Target: scaffold1853 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold1853
Description:

Target: scaffold1853; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 79 - 174
Target Start/End: Original strand, 633 - 728
Alignment:
Q  79 tgattagttgtgcattttctgaaatcgttggatcaattatgatggat-tattgttgactgtgatgtatatttatatttaaataaattatacatgttg 174  Q
    |||||| ||||| |||||||| ||| ||||||| |||||||| |||| | |||||||||||||||||| |||| |||||| ||||| ||||||||||    
T  633 tgattaattgtgtattttctggaattgttggattaattatga-ggatctgttgttgactgtgatgtatgtttacatttaattaaatcatacatgttg 728  T

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Target: scaffold0200 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 17750 - 17678
Alignment:
Q  12 tgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    ||||| ||||||||  ||||||||||||||| |||||||| |||||||| ||||||||||||| | |||||||    
T  17750 tgttgatagtaatgtaatatatttgtatatgaattatgtgaattatatatgatgtttaagttgttgttgatta 17678  T

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Target: scaffold0165 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 113 - 181
Target Start/End: Complemental strand, 18214 - 18146
Alignment:
Q  113 aattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaatt 181  Q
    |||||||||| ||| ||| ||||||||||||||| |||||| ||||||||| |||||||||| ||||||    
T  18214 aattatgatgaattgttgatgactgtgatgtatacttatatctaaataaatcatacatgttgttgaatt 18146  T

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Target: scaffold0069 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 135 - 206
Target Start/End: Complemental strand, 29569 - 29497
Alignment:
Q  135 ctgtgatgtatatttatatttaaataaattatacatgttgctgaa-ttcttttcaaaggttgaagtattatta 206  Q
    |||| |||||||||||||||||||||||||||||| |||| |||| ||| ||||||||||||| |||| ||||    
T  29569 ctgttatgtatatttatatttaaataaattatacaagttgttgaatttcatttcaaaggttgatgtatcatta 29497  T

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Target: scaffold0069; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 201
Target Start/End: Complemental strand, 34810 - 34743
Alignment:
Q  135 ctgtgatgtatatttatatttaaataaattatacatgttgctgaa-ttcttttcaaaggttgaagtat 201  Q
    |||| |||||||||||||||||||||||||||||| |||| |||| ||| ||||||||||||| ||||    
T  34810 ctgttatgtatatttatatttaaataaattatacaagttgttgaatttcatttcaaaggttgatgtat 34743  T

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Target: scaffold0431 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 84
Target Start/End: Original strand, 15030 - 15081
Alignment:
Q  33 tttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    ||||||||||||||||||| |||||||||||||||||||||| | |||||||    
T  15030 tttgtatatgcattatgtgaattatataagatgtttaagttgttgttgatta 15081  T

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Target: scaffold0292 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 6799 - 6716
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||| |||||| |||| | ||||||  ||||||||||||||| | |||||| |||||||||||||||||||||| | |||||||    
T  6799 atatgatttgaggttgatggtaatgtaatatatttgtatatgtagtatgtgaattatataagatgtttaagttgttgttgatta 6716  T

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Target: scaffold0006 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 68
Target Start/End: Complemental strand, 97190 - 97128
Alignment:
Q  6 atttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgttt 68  Q
    |||||||||||||| ||||| |||||||||||||||||||||  || |||||||| |||||||    
T  97190 atttgatgttgttaataatgtgatatatttgtatatgcattacatgaattatatatgatgttt 97128  T

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Target: scaffold0006; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 68
Target Start/End: Complemental strand, 106468 - 106406
Alignment:
Q  6 atttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgttt 68  Q
    |||||||||||||| ||||| |||||||||||||||||||||  || |||||||| |||||||    
T  106468 atttgatgttgttaataatgtgatatatttgtatatgcattacatgaattatatatgatgttt 106406  T

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Target: scaffold0790 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0790
Description:

Target: scaffold0790; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 75
Target Start/End: Complemental strand, 6210 - 6149
Alignment:
Q  14 ttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttga 75  Q
    |||||| ||||| |||||| |||||||||||||||||| ||| |||| ||||||||||||||    
T  6210 ttgttaataatgtgatataattgtatatgcattatgtgaattttatatgatgtttaagttga 6149  T

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Target: scaffold0790; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 174
Target Start/End: Complemental strand, 4786 - 4722
Alignment:
Q  110 atcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttg 174  Q
    |||||||||||||  || ||| ||||||||||||||  |||||| ||||||||| ||||||||||    
T  4786 atcaattatgatgatttgttgatgactgtgatgtatgcttatatctaaataaatcatacatgttg 4722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 181
Target Start/End: Original strand, 7307 - 7372
Alignment:
Q  116 tatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaatt 181  Q
    ||||||| ||| ||| || |||| ||||| ||||||||||||||||||||||||||||| ||||||    
T  7307 tatgatgaattgttgatggctgttatgtacatttatatttaaataaattatacatgttgttgaatt 7372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 80
Target Start/End: Complemental strand, 446671 - 446602
Alignment:
Q  11 atgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattg 80  Q
    ||||||||||||||| |||||| || ||||||||||||||||| ||| || |||||| |||||| |||||    
T  446671 atgttgttagtaatgtgatatagttatatatgcattatgtggaatatgtatgatgttgaagttgttattg 446602  T

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Target: scaffold0180 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 94 - 174
Target Start/End: Complemental strand, 12761 - 12681
Alignment:
Q  94 tttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttg 174  Q
    |||||| ||| ||||||| ||||||||||  || ||| |||||||||||||| ||||||| ||| ||||| ||||||||||    
T  12761 tttctggaattgttggattaattatgatgatttgttgatgactgtgatgtatgtttatatctaattaaatcatacatgttg 12681  T

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Target: scaffold0180; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 287
Target Start/End: Original strand, 29260 - 29288
Alignment:
Q  259 gttgtcgttgatgttgttgagttgtatgt 287  Q
    |||||||||||||||||||||||||||||    
T  29260 gttgtcgttgatgttgttgagttgtatgt 29288  T

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Target: scaffold0585 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 201
Target Start/End: Original strand, 8373 - 8440
Alignment:
Q  135 ctgtgatgtatatttatatttaaataaattatacatgttgct-gaattcttttcaaaggttgaagtat 201  Q
    |||| |||||||||||||||||||||||||||||| |||| |  ||||| ||||||||||||| ||||    
T  8373 ctgttatgtatatttatatttaaataaattatacaagttgttaaaattcatttcaaaggttgatgtat 8440  T

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Target: scaffold0167 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 79 - 174
Target Start/End: Complemental strand, 20185 - 20090
Alignment:
Q  79 tgattagttgtgcattttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttg 174  Q
    |||||| ||||||||||||| |||| |||||||  |||||||||   | ||||||||||||||||||  || ||||||| ||||| | ||||||||    
T  20185 tgattaattgtgcattttctaaaattgttggattgattatgatgatctgttgttgactgtgatgtatgcttttatttaattaaatcaaacatgttg 20090  T

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Target: scaffold0034 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 73
Target Start/End: Complemental strand, 120191 - 120124
Alignment:
Q  6 atttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagtt 73  Q
    ||||||||||| |  |||||  |||||||||||||||||||||||| | ||||| |||||||||||||    
T  120191 atttgatgttgatgataatgtaatatatttgtatatgcattatgtgaactatatcagatgtttaagtt 120124  T

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Target: scaffold0452 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 13431 - 13502
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttg 74  Q
    |||| ||||||||||| | ||||||  ||||||||||||  ||||||| || ||||||||||||||||||||||    
T  13431 atatgatttgatgttgatggtaatgtaatatatttgtat--gcattatctgaattatataagatgtttaagttg 13502  T

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Target: scaffold0205 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 84
Target Start/End: Complemental strand, 29851 - 29777
Alignment:
Q  11 atgttgttagtaatgagatatattt-gtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||||| ||||||||  |||||||| |||| ||||||||||| | ||| |||||||||||||||||| |||||||    
T  29851 atgttgatagtaatgtaatatattttgtatgtgcattatgtgaagtatttaagatgtttaagttgatgttgatta 29777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 725 - 643
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatt 83  Q
    |||| |||||||||||||| ||||| ||||||  |||||||||||||  || |||||||| ||||||| || || ||||||||    
T  725 atatgatttgatgttgttaataatgtgatataaatgtatatgcattacatgaattatatatgatgtttgagatgttattgatt 643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 174
Target Start/End: Original strand, 3625 - 3707
Alignment:
Q  92 attttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttg 174  Q
    |||||||| ||| ||||||| ||||||||||  || ||| |||||||||||||| |||||||  || ||||| ||||||||||    
T  3625 attttctggaattgttggattaattatgatgatttgttgatgactgtgatgtatgtttatatcgaattaaatcatacatgttg 3707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 68
Target Start/End: Original strand, 128907 - 128969
Alignment:
Q  6 atttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgttt 68  Q
    |||||||||||||| ||||| ||||||||||||||| |||||  || |||||||| |||||||    
T  128907 atttgatgttgttaataatgtgatatatttgtatatccattacatgaattatatatgatgttt 128969  T

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Target: scaffold0561 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 84
Target Start/End: Complemental strand, 10651 - 10578
Alignment:
Q  11 atgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||||| || ||||| |||||| ||||||| ||||||  || |||||||| ||||||||||||||| |||||||    
T  10651 atgttgatattaatgtgatataattgtatacgcattacatgaattatatatgatgtttaagttgatgttgatta 10578  T

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Target: scaffold0356 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0356
Description:

Target: scaffold0356; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 84
Target Start/End: Original strand, 604 - 677
Alignment:
Q  11 atgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatta 84  Q
    |||||| || ||||| |||||| ||||||| ||||||  || |||||||| ||||||||||||||| |||||||    
T  604 atgttgatattaatgtgatataattgtatacgcattacatgaattatatatgatgtttaagttgatgttgatta 677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 105 - 174
Target Start/End: Original strand, 10511 - 10580
Alignment:
Q  105 gttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttg 174  Q
    ||||||| | ||||| || ||| ||| |||||||||||||| ||||||||||||||||| ||||| ||||    
T  10511 gttggattacttatgttgaattgttgatgactgtgatgtatgtttatatttaaataaatcatacaagttg 10580  T

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Target: scaffold0261; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 105 - 174
Target Start/End: Original strand, 18690 - 18759
Alignment:
Q  105 gttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttg 174  Q
    ||||||| | ||||| || ||| ||| |||||||||||||| ||||||||||||||||| ||||| ||||    
T  18690 gttggattacttatgttgaattgttgatgactgtgatgtatgtttatatttaaataaatcatacaagttg 18759  T

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Target: scaffold0139 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 132 - 173
Target Start/End: Original strand, 2803 - 2844
Alignment:
Q  132 tgactgtgatgtatatttatatttaaataaattatacatgtt 173  Q
    |||||||| || ||||||||||||||||||||||||||||||    
T  2803 tgactgtgttgcatatttatatttaaataaattatacatgtt 2844  T

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Target: scaffold0081 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 4629 - 4702
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttg 74  Q
    |||| |||| ||| || ||||||||  |||||||||||||||||||||||| ||||| | | ||||||||||||    
T  4629 atatgatttaatgatgatagtaatgtaatatatttgtatatgcattatgtgaattatttgaaatgtttaagttg 4702  T

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Target: scaffold1098 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1098
Description:

Target: scaffold1098; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 181
Target Start/End: Complemental strand, 2253 - 2185
Alignment:
Q  113 aattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaatt 181  Q
    ||||||||||  || ||| ||||||||||||||  |||||| ||||||||| |||||||||| ||||||    
T  2253 aattatgatgatttgttgatgactgtgatgtatgcttatatctaaataaatcatacatgttgttgaatt 2185  T

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Target: scaffold0091 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 174
Target Start/End: Original strand, 22581 - 22669
Alignment:
Q  86 ttgtgcattttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttg 174  Q
    ||||| |||||||| ||| | ||||| || |||||||  || ||| |||||||||||||| |||| |||||| ||||| ||||||||||    
T  22581 ttgtgtattttctggaattgctggattaactatgatgatttgttgatgactgtgatgtatgtttacatttaattaaatcatacatgttg 22669  T

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Target: scaffold0091; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 174
Target Start/End: Original strand, 26778 - 26866
Alignment:
Q  86 ttgtgcattttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttg 174  Q
    ||||| |||||||| ||| | ||||| || |||||||  || ||| |||||||||||||| |||| |||||| ||||| ||||||||||    
T  26778 ttgtgtattttctggaattgatggattaactatgatgatttgttgatgactgtgatgtatgtttacatttaattaaatcatacatgttg 26866  T

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Target: scaffold0007 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 181
Target Start/End: Original strand, 207571 - 207647
Alignment:
Q  105 gttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaatt 181  Q
    ||||||| | ||||||||  || ||| ||||| |||||||| ||||||||||| ||||| |||||||||| ||||||    
T  207571 gttggattacttatgatgatttgttgatgactatgatgtatgtttatatttaattaaatcatacatgttgttgaatt 207647  T

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Target: scaffold0860 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0860
Description:

Target: scaffold0860; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 138 - 169
Target Start/End: Complemental strand, 553 - 522
Alignment:
Q  138 tgatgtatatttatatttaaataaattataca 169  Q
    ||||||||||||||||||||||||||||||||    
T  553 tgatgtatatttatatttaaataaattataca 522  T

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Target: scaffold0609 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 138 - 169
Target Start/End: Complemental strand, 4757 - 4726
Alignment:
Q  138 tgatgtatatttatatttaaataaattataca 169  Q
    ||||||||||||||||||||||||||||||||    
T  4757 tgatgtatatttatatttaaataaattataca 4726  T

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Target: scaffold0556 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 138 - 169
Target Start/End: Complemental strand, 9941 - 9910
Alignment:
Q  138 tgatgtatatttatatttaaataaattataca 169  Q
    ||||||||||||||||||||||||||||||||    
T  9941 tgatgtatatttatatttaaataaattataca 9910  T

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Target: scaffold0420 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 6215 - 6282
Alignment:
Q  1 atataatttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgttt 68  Q
    |||| |||||||||||||| ||||| ||||||  |||||||||||||  || |||||||| |||||||    
T  6215 atatgatttgatgttgttattaatgtgatataaatgtatatgcattacatgaattatatatgatgttt 6282  T

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Target: scaffold0021 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 74
Target Start/End: Complemental strand, 146366 - 146299
Alignment:
Q  8 ttgatgttgttagtaatgagatatatttgtatatgcattatgtgg-attatataagatgtttaagttg 74  Q
    |||||||||||| | ||| | |||||||| | ||||||||||||| |||||||| |||||||||||||    
T  146366 ttgatgttgttaatgatgtggtatatttgcaaatgcattatgtggaattatatatgatgtttaagttg 146299  T

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Target: scaffold0021; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 146861 - 146812
Alignment:
Q  132 tgactgtgatgtatatttatatttaaataaattatacatgttgctgaatt 181  Q
    |||||||||||||| |||| |||||| ||||| |||||||||| ||||||    
T  146861 tgactgtgatgtatgtttacatttaattaaatcatacatgttgttgaatt 146812  T

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Target: scaffold1351 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1351
Description:

Target: scaffold1351; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 189 - 112
Alignment:
Q  6 atttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgatt 83  Q
    |||||||||||||| |||||  |||||  |||||||||||||  || |||||||| ||||||| || || ||||||||    
T  189 atttgatgttgttaataatgttatataaatgtatatgcattacatgaattatatatgatgtttgagatgttattgatt 112  T

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Target: scaffold0751 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 181
Target Start/End: Complemental strand, 703 - 650
Alignment:
Q  128 ttgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaatt 181  Q
    ||||||||||||||||||  || ||||||| ||||| |||||||||| ||||||    
T  703 ttgttgactgtgatgtatgcttttatttaattaaatcatacatgttgttgaatt 650  T

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Target: scaffold0278 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 76
Target Start/End: Complemental strand, 7995 - 7946
Alignment:
Q  28 atatatttgtatatgcattatgtggattatataagatg-tttaagttgat 76  Q
    |||||||||| |||| |||||||| ||||||||||||| |||||||||||    
T  7995 atatatttgtgtatggattatgtgaattatataagatgttttaagttgat 7946  T

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Target: scaffold0162 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 24839 - 24908
Alignment:
Q  11 atgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattg 80  Q
    ||||||||||| ||| |||||| || | ||||||||||||||| ||| || |||||| |||||| |||||    
T  24839 atgttgttagtgatgtgatatagttatttatgcattatgtggaatatgtatgatgttgaagttgttattg 24908  T

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Target: scaffold0138 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 18176 - 18237
Alignment:
Q  7 tttgatgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgttt 68  Q
    ||||||||||||| ||||| ||||||  |||||||||||||  || |||||||| |||||||    
T  18176 tttgatgttgttattaatgtgatataaatgtatatgcattacatgaattatatatgatgttt 18237  T

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Target: scaffold0045 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 46788 - 46857
Alignment:
Q  11 atgttgttagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattg 80  Q
    ||||||||||| ||| |||||| || | ||||||||||||||| ||| || |||||| |||||| |||||    
T  46788 atgttgttagtgatgtgatatagttatttatgcattatgtggaatatgtatgatgttgaagttgttattg 46857  T

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Target: scaffold0008 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 174
Target Start/End: Original strand, 124791 - 124852
Alignment:
Q  113 aattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttg 174  Q
    ||||||||||  || ||| ||||||||||||||  |||||| ||||||||| ||||||||||    
T  124791 aattatgatgatttgttgatgactgtgatgtatgcttatatctaaataaatcatacatgttg 124852  T

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Target: scaffold0434 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 181
Target Start/End: Original strand, 1195 - 1282
Alignment:
Q  93 ttttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaatt 181  Q
    ||||||| ||| ||||||| || |||| ||  || ||| |||||||||||||| |||||| |||| ||||| |||||||||||| ||||    
T  1195 ttttctggaattgttggattaactatgctgccttgttgatgactgtgatgtatgtttata-ttaattaaatcatacatgttgcttaatt 1282  T

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Target: scaffold0338 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 287
Target Start/End: Original strand, 3873 - 3901
Alignment:
Q  259 gttgtcgttgatgttgttgagttgtatgt 287  Q
    |||||||||||||||||||||||||||||    
T  3873 gttgtcgttgatgttgttgagttgtatgt 3901  T

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Target: scaffold0326 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 174
Target Start/End: Original strand, 5226 - 5313
Alignment:
Q  86 ttgtgcattttctgaaatcgttggatcaattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttg 174  Q
    ||||| |||||||| ||| ||||||| || ||| |||  |||| | |||||||||||||| |||| |||||| ||||| ||||||||||    
T  5226 ttgtgtattttctggaattgttggattaactataatgatttat-gatgactgtgatgtatgtttacatttaattaaatcatacatgttg 5313  T

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Target: scaffold0178 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 174
Target Start/End: Complemental strand, 25747 - 25687
Alignment:
Q  114 attatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttg 174  Q
    |||||||||  || ||| ||||||||||||||  |||||| ||||||||| ||||||||||    
T  25747 attatgatgatttgttgatgactgtgatgtatgcttatatctaaataaatcatacatgttg 25687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 287
Target Start/End: Complemental strand, 8197 - 8169
Alignment:
Q  259 gttgtcgttgatgttgttgagttgtatgt 287  Q
    |||||||||||||||||||||||||||||    
T  8197 gttgtcgttgatgttgttgagttgtatgt 8169  T

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Target: scaffold0049 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 181
Target Start/End: Original strand, 53513 - 53561
Alignment:
Q  133 gactgtgatgtatatttatatttaaataaattatacatgttgctgaatt 181  Q
    ||||||||||||| ||||||| ||| ||||| |||||||||| ||||||    
T  53513 gactgtgatgtatgtttatatctaattaaatcatacatgttgttgaatt 53561  T

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Target: scaffold0003 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 181
Target Start/End: Original strand, 81030 - 81098
Alignment:
Q  113 aattatgatggattattgttgactgtgatgtatatttatatttaaataaattatacatgttgctgaatt 181  Q
    ||||||||||  || ||| ||||||||||||||  |||||| ||||||||| ||||| |||| ||||||    
T  81030 aattatgatgatttgttgatgactgtgatgtatgcttatatctaaataaatcatacacgttgttgaatt 81098  T

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