View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15309_high_14 (Length: 247)
Name: NF15309_high_14
Description: NF15309
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15309_high_14 |
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Alignment Details
Target: chr7 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 17 - 236
Target Start/End: Original strand, 41778100 - 41778319
Alignment:
| Q |
17 |
agaagcttgtgaattcagtgtatagtacaagaagcatgtgtattcattcaatgtttatgtttctatgtggccaattccttgttggctacacttgaaggtc |
116 |
Q |
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| T |
41778100 |
agaagcttgtgaattcagtgtatagtacaagaagcatgtgtattcattcaatgtttatgtttctatgtggccaattccttgttggctacacttgaaggtc |
41778199 |
T |
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| Q |
117 |
actttctgtattcaataaacaaggcgtgatagccttcctttctataagaattagtggttgatcgttagctacttgctaacaatcatatcattacacttgt |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
41778200 |
actttctgtattcaataaacaaggcgtgatagccttcccttctataagaattagtggttgattgttagctacttgctaacaatcatatcattacacttgt |
41778299 |
T |
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| Q |
217 |
ttatactttgtggtattcat |
236 |
Q |
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|||||||||||||||||||| |
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| T |
41778300 |
ttatactttgtggtattcat |
41778319 |
T |
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