View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15309_high_17 (Length: 202)
Name: NF15309_high_17
Description: NF15309
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15309_high_17 |
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Alignment Details
Target: chr3 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 25 - 195
Target Start/End: Complemental strand, 53096255 - 53096085
Alignment:
| Q |
25 |
gttggaacagttcattctgctagtttggacatttttcctgaaactaaaaatggtattcttcagcagcagtgccattatcttgacatatctctctctaagg |
124 |
Q |
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| T |
53096255 |
gttggaacagttcattctgctagtttggacatttttcctgaaactaaaaatggtattcttcagcagcagtgccattatcttgacatatctctctctaagg |
53096156 |
T |
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| Q |
125 |
atcctccgatgcctgcaaaatgtgatcctctaaagcaagtaagcttatgaatgcttttggtgatgatgtcc |
195 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
53096155 |
atcctccgatgcctgcaaaatgtgatcctctaaagcaagtaagcttatgaatgcttttggtaatgatgtcc |
53096085 |
T |
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