View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1531-INSERTION-3 (Length: 233)
Name: NF1531-INSERTION-3
Description: NF1531
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1531-INSERTION-3 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 8 - 233
Target Start/End: Original strand, 40173664 - 40173889
Alignment:
| Q |
8 |
aatacatattctaaggagcaggtttgggttttgttatttatctattgatttgattcataactgcagctttggatacctttttatttggttttagtatcct |
107 |
Q |
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| T |
40173664 |
aatacatattctaaggagcaggtttgggttttgttatttatctattaatttgattcataactgcagctttggatatctttttatttggttttagtatcct |
40173763 |
T |
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| Q |
108 |
aaaactatagatatatgatattattgcaggtgttggagatggagtcctctgttctgaatttcttgaagtttgaaatgacagctcctacaattagatgttt |
207 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40173764 |
aaaactatagatatatgatattattgcaggtgctggagatggagtcctctgttctgaatttcttgaagtttgaaatgacagctcctacaattagatgttt |
40173863 |
T |
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| Q |
208 |
tttgaggtaatgactggttttcttca |
233 |
Q |
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|||||||||||||||||||||||||| |
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| T |
40173864 |
tttgaggtaatgactggttttcttca |
40173889 |
T |
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