View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15311_high_29 (Length: 288)
Name: NF15311_high_29
Description: NF15311
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15311_high_29 |
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Alignment Details
Target: chr3 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 6 - 218
Target Start/End: Original strand, 41649655 - 41649867
Alignment:
| Q |
6 |
atcatatagctcagcctcagagagtaccggtaagatttgacgtaattaaactatcatctctcaccatacaaaattactttgatgctgattgaaatttttg |
105 |
Q |
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| T |
41649655 |
atcatctagctcagcctcagagagtactagtaagatttgacgtaattaaactatcatctctcaccatacaaaattaccttgatgctgattgaaatttttg |
41649754 |
T |
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| Q |
106 |
ttattgaaactatgtgcaacatttgagaaaatggaataacaagaaaagacggatggatgaccgccagaggaaacaaattgaattctgctcttcacatgac |
205 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | |
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| T |
41649755 |
ttattgaaactatgtgcaacatttgagaaaatggaataacaagaaaagacggatggatgaccgccagaggaaacaaattgaattctgctcttcatatggc |
41649854 |
T |
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| Q |
206 |
atattttgctcgc |
218 |
Q |
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| T |
41649855 |
acattttgctcgc |
41649867 |
T |
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