View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15311_high_35 (Length: 257)

Name: NF15311_high_35
Description: NF15311
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15311_high_35
NF15311_high_35
[»] chr6 (19 HSPs)
chr6 (14-132)||(15832577-15832694)
chr6 (6-144)||(17598542-17598679)
chr6 (6-132)||(32869678-32869803)
chr6 (6-129)||(22880633-22880755)
chr6 (6-132)||(6209440-6209565)
chr6 (6-133)||(29857826-29857952)
chr6 (6-132)||(11427616-11427743)
chr6 (50-132)||(31109418-31109500)
chr6 (6-132)||(31976248-31976373)
chr6 (6-129)||(23128102-23128224)
chr6 (6-132)||(31110736-31110859)
chr6 (56-131)||(946377-946452)
chr6 (28-127)||(9379708-9379807)
chr6 (6-132)||(31953005-31953130)
chr6 (21-128)||(28536477-28536582)
chr6 (6-132)||(4231548-4231673)
chr6 (6-132)||(15507999-15508124)
chr6 (6-132)||(15990017-15990142)
chr6 (6-132)||(30341335-30341460)
[»] chr8 (27 HSPs)
chr8 (6-135)||(12831044-12831172)
chr8 (6-132)||(14547922-14548047)
chr8 (6-132)||(34012271-34012396)
chr8 (6-132)||(37038479-37038604)
chr8 (6-132)||(40423918-40424043)
chr8 (6-137)||(504096-504226)
chr8 (6-131)||(5957831-5957955)
chr8 (27-132)||(15197333-15197438)
chr8 (28-132)||(10284627-10284731)
chr8 (6-132)||(15048156-15048281)
chr8 (6-132)||(23122572-23122697)
chr8 (6-132)||(1179915-1180040)
chr8 (6-132)||(44507062-44507187)
chr8 (6-127)||(10621062-10621182)
chr8 (6-137)||(43414556-43414686)
chr8 (12-132)||(4854844-4854963)
chr8 (6-110)||(8841407-8841510)
chr8 (50-132)||(14055610-14055692)
chr8 (64-132)||(20074966-20075034)
chr8 (6-89)||(15258904-15258986)
chr8 (67-138)||(30479509-30479580)
chr8 (7-132)||(17443825-17443949)
chr8 (6-138)||(16056376-16056507)
chr8 (6-138)||(16383371-16383502)
chr8 (6-84)||(9122233-9122310)
chr8 (50-132)||(42221515-42221597)
chr8 (6-132)||(34307216-34307341)
[»] chr1 (29 HSPs)
chr1 (27-138)||(8346383-8346494)
chr1 (6-132)||(9474851-9474976)
chr1 (6-132)||(48716257-48716382)
chr1 (6-129)||(44548351-44548473)
chr1 (6-132)||(27564710-27564835)
chr1 (6-132)||(2581915-2582040)
chr1 (6-132)||(38632296-38632421)
chr1 (6-132)||(51898658-51898783)
chr1 (6-137)||(38595149-38595279)
chr1 (6-132)||(41758805-41758930)
chr1 (6-132)||(3000319-3000444)
chr1 (6-132)||(32813247-32813372)
chr1 (6-132)||(47452295-47452420)
chr1 (6-132)||(49811502-49811627)
chr1 (27-133)||(43131-43237)
chr1 (6-132)||(37649198-37649323)
chr1 (6-132)||(45044535-45044660)
chr1 (6-132)||(50630458-50630583)
chr1 (43-129)||(26274435-26274521)
chr1 (27-106)||(13414787-13414866)
chr1 (6-132)||(23597066-23597191)
chr1 (43-131)||(11152389-11152476)
chr1 (6-137)||(5958975-5959105)
chr1 (40-91)||(44334178-44334229)
chr1 (27-125)||(26440741-26440839)
chr1 (6-132)||(37926413-37926538)
chr1 (6-132)||(50590975-50591100)
chr1 (6-89)||(48489343-48489425)
chr1 (6-132)||(41608468-41608593)
[»] chr5 (25 HSPs)
chr5 (6-132)||(6679698-6679823)
chr5 (6-132)||(40145407-40145532)
chr5 (6-138)||(18520859-18520990)
chr5 (6-132)||(2740274-2740399)
chr5 (6-132)||(33149613-33149738)
chr5 (6-132)||(13811652-13811777)
chr5 (6-132)||(28177775-28177900)
chr5 (6-132)||(36732917-36733042)
chr5 (6-137)||(14831809-14831939)
chr5 (6-132)||(35785199-35785324)
chr5 (6-132)||(42414277-42414402)
chr5 (6-132)||(15409585-15409710)
chr5 (28-134)||(35943888-35943994)
chr5 (6-132)||(26720516-26720641)
chr5 (6-132)||(26990265-26990390)
chr5 (6-132)||(31008988-31009113)
chr5 (6-131)||(36875587-36875702)
chr5 (43-132)||(41470427-41470516)
chr5 (6-132)||(2252143-2252268)
chr5 (6-132)||(20073491-20073616)
chr5 (6-134)||(33825299-33825426)
chr5 (27-86)||(31132390-31132449)
chr5 (6-132)||(3921240-3921365)
chr5 (28-84)||(21370052-21370108)
chr5 (51-132)||(6260020-6260101)
[»] chr4 (31 HSPs)
chr4 (6-132)||(41236347-41236472)
chr4 (6-138)||(480422-480553)
chr4 (6-138)||(50052403-50052534)
chr4 (6-132)||(54473508-54473633)
chr4 (6-132)||(29239886-29240011)
chr4 (12-132)||(11511443-11511562)
chr4 (12-132)||(48183030-48183149)
chr4 (6-141)||(42044342-42044476)
chr4 (6-132)||(6034044-6034169)
chr4 (12-132)||(24995088-24995207)
chr4 (53-132)||(50526192-50526271)
chr4 (6-132)||(23608235-23608360)
chr4 (28-132)||(3481654-3481758)
chr4 (6-132)||(29234220-29234345)
chr4 (6-132)||(31910192-31910317)
chr4 (6-132)||(55475191-55475316)
chr4 (6-127)||(53352541-53352660)
chr4 (65-132)||(40574779-40574846)
chr4 (64-132)||(47104544-47104612)
chr4 (6-124)||(28480243-28480360)
chr4 (6-124)||(28481118-28481235)
chr4 (6-124)||(28481993-28482110)
chr4 (6-84)||(41823930-41824007)
chr4 (6-132)||(48647701-48647826)
chr4 (28-132)||(29977885-29977989)
chr4 (28-100)||(56300161-56300233)
chr4 (6-132)||(19670691-19670816)
chr4 (6-132)||(47986208-47986333)
chr4 (67-132)||(29547994-29548059)
chr4 (67-132)||(44536781-44536845)
chr4 (6-110)||(17983718-17983821)
[»] chr2 (29 HSPs)
chr2 (6-129)||(19930795-19930917)
chr2 (6-132)||(10249357-10249482)
chr2 (6-132)||(13438343-13438468)
chr2 (12-132)||(32505629-32505748)
chr2 (6-129)||(28863458-28863580)
chr2 (6-132)||(9058480-9058605)
chr2 (6-134)||(17473018-17473145)
chr2 (6-132)||(40701478-40701603)
chr2 (28-132)||(33436096-33436200)
chr2 (53-132)||(4060685-4060764)
chr2 (6-132)||(7465710-7465835)
chr2 (19-132)||(5574475-5574588)
chr2 (28-132)||(27864704-27864808)
chr2 (6-132)||(20700815-20700940)
chr2 (6-132)||(28381630-28381755)
chr2 (6-132)||(30915463-30915588)
chr2 (50-132)||(38882832-38882913)
chr2 (14-132)||(42257193-42257310)
chr2 (27-132)||(40613897-40614002)
chr2 (6-132)||(17819979-17820104)
chr2 (6-132)||(36168836-36168961)
chr2 (50-131)||(41575138-41575219)
chr2 (6-132)||(38273117-38273242)
chr2 (7-132)||(2533124-2533247)
chr2 (64-132)||(33436211-33436279)
chr2 (6-132)||(26891479-26891604)
chr2 (6-134)||(38732352-38732479)
chr2 (6-132)||(43490121-43490246)
chr2 (6-110)||(2997462-2997565)
[»] chr7 (34 HSPs)
chr7 (6-132)||(19329842-19329967)
chr7 (6-132)||(38267040-38267165)
chr7 (6-138)||(35137527-35137658)
chr7 (6-133)||(4999489-4999615)
chr7 (21-132)||(19436176-19436287)
chr7 (6-132)||(8080358-8080483)
chr7 (27-132)||(3434562-3434667)
chr7 (27-132)||(7389389-7389494)
chr7 (19-132)||(36361900-36362013)
chr7 (6-129)||(3783998-3784120)
chr7 (29-132)||(21234401-21234504)
chr7 (6-132)||(38837217-38837342)
chr7 (6-131)||(32951468-32951592)
chr7 (19-132)||(36362026-36362139)
chr7 (7-138)||(3694361-3694491)
chr7 (6-136)||(40846088-40846217)
chr7 (6-132)||(40957707-40957832)
chr7 (6-132)||(46033776-46033901)
chr7 (6-145)||(8238199-8238338)
chr7 (12-132)||(26296644-26296763)
chr7 (28-139)||(35468851-35468962)
chr7 (6-132)||(36208173-36208298)
chr7 (6-127)||(35522881-35523001)
chr7 (216-257)||(43100198-43100239)
chr7 (43-132)||(46374813-46374902)
chr7 (21-132)||(38044197-38044308)
chr7 (6-132)||(32564401-32564526)
chr7 (6-132)||(41423682-41423807)
chr7 (64-132)||(39255955-39256023)
chr7 (66-132)||(10343597-10343663)
chr7 (53-91)||(16374845-16374883)
chr7 (6-132)||(18207180-18207304)
chr7 (6-132)||(22343361-22343486)
chr7 (76-132)||(31735884-31735940)
[»] chr3 (30 HSPs)
chr3 (6-132)||(53982011-53982136)
chr3 (6-132)||(33644200-33644325)
chr3 (6-132)||(11347897-11348022)
chr3 (6-132)||(17470405-17470530)
chr3 (6-132)||(54868870-54868995)
chr3 (20-132)||(27714879-27714991)
chr3 (28-132)||(33118847-33118951)
chr3 (6-132)||(9562999-9563124)
chr3 (19-132)||(11095342-11095453)
chr3 (6-132)||(49607414-49607539)
chr3 (6-127)||(52629305-52629425)
chr3 (53-132)||(36707445-36707524)
chr3 (6-132)||(8076393-8076518)
chr3 (6-132)||(24699929-24700054)
chr3 (6-131)||(31456690-31456814)
chr3 (14-132)||(26141515-26141632)
chr3 (6-132)||(35536626-35536751)
chr3 (14-132)||(41189747-41189864)
chr3 (6-127)||(26754700-26754820)
chr3 (28-128)||(30801729-30801829)
chr3 (67-125)||(35093592-35093650)
chr3 (6-132)||(51419335-51419460)
chr3 (43-128)||(48587102-48587187)
chr3 (67-134)||(14623874-14623941)
chr3 (6-132)||(8956762-8956887)
chr3 (6-132)||(47531865-47531990)
chr3 (6-132)||(20764890-20765015)
chr3 (6-132)||(48375681-48375806)
chr3 (64-132)||(35965806-35965874)
chr3 (6-141)||(41080700-41080832)
[»] scaffold1268 (1 HSPs)
scaffold1268 (6-132)||(904-1029)
[»] scaffold1267 (1 HSPs)
scaffold1267 (6-132)||(904-1029)
[»] scaffold0321 (1 HSPs)
scaffold0321 (6-142)||(10084-10218)
[»] scaffold0110 (1 HSPs)
scaffold0110 (28-132)||(8859-8963)
[»] scaffold0237 (1 HSPs)
scaffold0237 (6-133)||(4028-4154)
[»] scaffold0316 (1 HSPs)
scaffold0316 (28-89)||(17097-17158)


Alignment Details
Target: chr6 (Bit Score: 83; Significance: 2e-39; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 15832694 - 15832577
Alignment:
Q  14 agaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaaga 113  Q
    ||||||||| ||||||||||||||| | |||||||||| |||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||||     
T  15832694 agaagagga-gaaaaaagagaaaatgtatttgtgcaggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaatgatttattgtcacctaaagg 15832596  T
Q  114 tgtctatgtatcattactc 132  Q
    |||||||||||||||||||    
T  15832595 tgtctatgtatcattactc 15832577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 6 - 144
Target Start/End: Complemental strand, 17598679 - 17598542
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| || |||||||||| | || |||||| ||||||||||||| |||||||| |||||||||||| ||||||| | ||||||| ||    
T  17598679 aggaagagagaagagga-gagaaaagagaaagtgtgcttgtgcggggtccacgtgacaacgtgtcagatttttgtgtgggtgtcaaaagatgtattgcca 17598581  T
Q  106 cctaaagatgtctatgtatcattactcctttttaaaata 144  Q
    ||||| | ||||||||||||||||||| |||| ||||||    
T  17598580 cctaagggtgtctatgtatcattactcattttcaaaata 17598542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 32869803 - 32869678
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| || |||||||||| | || |||||| |||||||||||||||||||||| |||||||||||| ||||||| ||||||||| ||    
T  32869803 aggaagagagaagagga-gagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgcca 32869705  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| | |||||||||||| ||||||    
T  32869704 cctaagggtgtctatgtatctttactc 32869678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 6 - 129
Target Start/End: Original strand, 22880633 - 22880755
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| || |||||||||| | || |||||| |||||||||||||||||||||| | |||||||||| ||||||| ||||||||| ||    
T  22880633 aggaagagagaagagga-gagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagaattttgtgtgggtgtcaaagggtgtattgcca 22880731  T
Q  106 cctaaagatgtctatgtatcatta 129  Q
    ||||| | ||||||||||||||||    
T  22880732 cctaagggtgtctatgtatcatta 22880755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 6209440 - 6209565
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| || |||||||||| | || | |||| ||||||||||||||||||| || |||||||||||  |||||||| |||||||| ||    
T  6209440 aggaagagagaagagga-gagaaaagagaaagtgtgctagtgcggggtccacgtgactacgtgacagatttttgtgtgagtgtcaaatagtgtattgcca 6209538  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| | |||||||||||||||||||    
T  6209539 cctaagggtgtctatgtatcattactc 6209565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 6 - 133
Target Start/End: Complemental strand, 29857952 - 29857826
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||| |||| |||||||||| | || || ||| || ||||||| ||||||||||| |||||||||||| ||| ||| ||||||||| ||    
T  29857952 aggaagagagaagag-aagagaaaagagaaagtgtgcttatgcgggatccacgtaactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgcca 29857854  T
Q  106 cctaaagatgtctatgtatcattactcc 133  Q
     |||||| ||||||||||||||||||||    
T  29857853 tctaaaggtgtctatgtatcattactcc 29857826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 11427743 - 11427616
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| || |||||||||| | || |||||| || ||||||||||||||||||| |||||||||||| ||||||| | ||||||| ||    
T  11427743 aggaagagagaagagga-gagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgcca 11427645  T
Q  106 ccta--aagatgtctatgtatcattactc 132  Q
    ||||  | | |||||||||||||||||||    
T  11427644 cctaagagggtgtctatgtatcattactc 11427616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 50 - 132
Target Start/End: Original strand, 31109418 - 31109500
Alignment:
Q  50 gggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 132  Q
    ||||| |||||||||||||||| |||||||||||||||||||| ||||||||| ||||||| | |||||||  ||||||||||    
T  31109418 gggtctacgtgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctattaatcattactc 31109500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 31976373 - 31976248
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| || |||||||||| | || |||||| |||| || ||||| |||||||| |||||||||||| ||| ||| ||| ||||| ||    
T  31976373 aggaagagagaagagga-gagaaaagagaaagtgtgcttgtgcggggttcatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtatattgcca 31976275  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| |||||||||||||||| ||||    
T  31976274 cctaaggatgtctatgtatcataactc 31976248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 129
Target Start/End: Original strand, 23128102 - 23128224
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||| ||||||| || |||||||||| | || |||||  || ||||||||||||||||||| |||||||||||| ||||||| | |||||| |||    
T  23128102 aggaagagaaaagagga-gagaaaagagaaagtgtgcttgtgtgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattatca 23128200  T
Q  106 cctaaagatgtctatgtatcatta 129  Q
    | ||||| ||||||| ||||||||    
T  23128201 cataaaggtgtctatatatcatta 23128224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 31110736 - 31110859
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||| | || |||||||||| | || |||||||||||||| |||  ||||||||| ||||||||| |  ||||||| ||||||||| ||    
T  31110736 aggaagagagaagagta-gagaaaagagaaagtgtgcttgtgcagggtccatgtggttacgtgtcagatttttgtgag--tgtcaaagggtgtattgcca 31110832  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| |||||||||||||||| ||||    
T  31110833 cctaaggatgtctatgtatcataactc 31110859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 56 - 131
Target Start/End: Complemental strand, 946452 - 946377
Alignment:
Q  56 acgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattact 131  Q
    ||||||||| |||||| ||||||| || | ||||||| |||||||| |||||||| |||||||||||||| |||||    
T  946452 acgtgactaggtgtcagatttttgggtaggtgtcaaagggtgtattatcacctaaggatgtctatgtatcgttact 946377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 127
Target Start/End: Original strand, 9379708 - 9379807
Alignment:
Q  28 aaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcat 127  Q
    ||||||||||| ||||||||   | ||||| || | ||||||||||||||||| ||| ||||||  | |||||||||| |||| ||||||||||||||||    
T  9379708 aaagagaaaatgtgtttgtgtgagatccacatggccacgtgtcaaatttttgtatgggtgtcaagggatgtattgtcatctaaggatgtctatgtatcat 9379807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 31953005 - 31953130
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||| ||||  ||||||||| | ||||||||   ||||||| |||  || ||||| |||||| ||||| ||||||  ||||||||| ||    
T  31953005 aggaagagagaagag-aagatgaaagagaaagtgtgtttgtgtgaggtccacatgaacacatgtcagatttttatgtgggtgtcaaggggtgtattgcca 31953103  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| ||||||||| |||||||||||    
T  31953104 cctaaggatgtctatctatcattactc 31953130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 128
Target Start/End: Original strand, 28536477 - 28536582
Alignment:
Q  21 gaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctat 120  Q
    ||||| |||||||||| | || |||||  |||||||| ||||  ||||||| |||||||||||| ||||||  | ||||||| ||||||| ||||| |||    
T  28536477 gaagataaaagagaaagtgtgcttgtgtggggtccacatgac--cgtgtcagatttttgtgtgggtgtcaagggttgtattgccacctaaggatgtttat 28536574  T
Q  121 gtatcatt 128  Q
    ||||||||    
T  28536575 gtatcatt 28536582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 4231673 - 4231548
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||| ||||| ||||||||| | |  |||||| |||||||  || | |||||||| |||||||||||| || |||  ||||||||| ||    
T  4231673 aggaagagagaagag-aagaagaaagagaaagtgtacttgtgcggggtccatatggccacgtgtcagatttttgtgtgggtggcaaggggtgtattgcca 4231575  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| ||||| |||| ||||| ||||    
T  4231574 cctaatgatgtttatgaatcataactc 4231548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 15507999 - 15508124
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||| ||||| ||||||||| | |  |||||| |||||||  || | || ||||| |||||||||||| ||||||  ||||||||| ||    
T  15507999 aggaagagagaagag-aagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgcca 15508097  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| | ||| |||||||||| ||||    
T  15508098 cctaagggtgtttatgtatcataactc 15508124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 15990017 - 15990142
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||| ||||| ||||||||| | |  |||||| |||||||  || | || ||||| |||||||||||| ||||||  ||||||||| ||    
T  15990017 aggaagagagaagag-aagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgcca 15990115  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| | ||| |||||||||| ||||    
T  15990116 cctaagggtgtttatgtatcataactc 15990142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 30341335 - 30341460
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||| ||||| ||||||||| | |  |||||| |||||||  || | || ||||| |||||||||||| ||||||  ||||||||| ||    
T  30341335 aggaagagagaagag-aagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgcca 30341433  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| | ||| |||||||||| ||||    
T  30341434 cctaagggtgtttatgtatcataactc 30341460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 78; Significance: 2e-36; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 6 - 135
Target Start/End: Complemental strand, 12831172 - 12831044
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| || |||||||||| | || |||||| |||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||    
T  12831172 aggaagagagaagagga-gagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtca 12831074  T
Q  106 cctaaagatgtctatgtatcattactcctt 135  Q
    ||||| | ||||||||||||||||||||||    
T  12831073 cctaagggtgtctatgtatcattactcctt 12831044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 14548047 - 14547922
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| || |||||||||| | || |||||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||    
T  14548047 aggaagagagaagagga-gagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgcca 14547949  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| | |||||||||||| ||||||    
T  14547948 cctaagggtgtctatgtatctttactc 14547922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 34012271 - 34012396
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| || |||||||||| | || |||||| || |||||||||||||||||||||||||||||||| ||||||| ||||||||  ||    
T  34012271 aggaagagagaagagga-gagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattacca 34012369  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| | |||||||||||||||||||    
T  34012370 cctaagggtgtctatgtatcattactc 34012396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 37038604 - 37038479
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| ||  ||| ||||| | || |||||| || ||||||||||||||||||| |||||||||||| ||||||| ||||||||| ||    
T  37038604 aggaagagagaagagga-gaggaaatagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgcca 37038506  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    |||||||||||||||||||||||||||    
T  37038505 cctaaagatgtctatgtatcattactc 37038479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 40423918 - 40424043
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| || |||||||||| | || |||||| |||||||| ||||||||||||| |||||||||||||||||||| ||||||||| ||    
T  40423918 aggaagagagaagagga-gagaaaagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgcca 40424016  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| | | |||||||||||||||||    
T  40424017 cctaagggtatctatgtatcattactc 40424043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 6 - 137
Target Start/End: Original strand, 504096 - 504226
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| |||||||| || || |||||||||  | || |||||| |||||||||||||||||||||| |||||||||||| ||||||| ||||||||| ||    
T  504096 aggaagagagaagatga-gagaaaagagaatgtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgcca 504194  T
Q  106 cctaaagatgtctatgtatcattactcctttt 137  Q
    ||||| | ||||||||||||||||||| ||||    
T  504195 cctaagggtgtctatgtatcattactcatttt 504226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 6 - 131
Target Start/End: Complemental strand, 5957955 - 5957831
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| ||  ||||||||| | || |||||| || ||||||||||||||||||| |||||||||||| ||||||| ||||||||| ||    
T  5957955 aggaagagagaagagga-gaggaaagagaaagtgtgattgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgcca 5957857  T
Q  106 cctaaagatgtctatgtatcattact 131  Q
    |||||  |||||||||||||||||||    
T  5957856 cctaagaatgtctatgtatcattact 5957831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 15197438 - 15197333
Alignment:
Q  27 aaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatca 126  Q
    |||||||||| | || |||||| |||||||||||||||||||||| |||||||||||| ||||||| ||||||||| |||||||   |||||||||||||    
T  15197438 aaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatca 15197339  T
Q  127 ttactc 132  Q
    ||||||    
T  15197338 ttactc 15197333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 28 - 132
Target Start/End: Original strand, 10284627 - 10284731
Alignment:
Q  28 aaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcat 127  Q
    ||||||||| | || |||||| ||||||||||||||||||||||||||||||||||| |||||||  |||||||||||| ||| | ||||||||||||||    
T  10284627 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagagtgtattgtcacttaagggtgtctatgtatcat 10284726  T
Q  128 tactc 132  Q
     ||||    
T  10284727 aactc 10284731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 15048156 - 15048281
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| |||||||||||   ||||||||||| | || |||||| ||||||| ||| |||||||||| |||||||||||| ||||||| ||||||||| ||    
T  15048156 aggaagagagaagaggagataaaaagagaaagtgtgcttgtgcggggtccatgtggctacgtgtcagatttttgtgtgg-tgtcaaagggtgtattgcca 15048254  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| |||||||||||||||| ||||    
T  15048255 cctaaggatgtctatgtatcataactc 15048281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 23122572 - 23122697
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| |||||| |||| || |||||||||| | || || ||| |||||||||||||||||||||| |||||||||||| ||||||| ||||||||| ||    
T  23122572 aggaagagagaacagga-gagaaaagagaaagtgtgcttatgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgcca 23122670  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    | ||| | |||||||||||||||||||    
T  23122671 cttaagggtgtctatgtatcattactc 23122697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 1179915 - 1180040
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| || |||||||||| | || |||||| |  ||||| ||||||||||||| |||||||||||| ||||||| ||||||||  ||    
T  1179915 aggaagagagaagagga-gagaaaagagaaagtgtgcttgtgcggaatccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattacca 1180013  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| | |||||||||||||||||||    
T  1180014 cctaagggtgtctatgtatcattactc 1180040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 44507062 - 44507187
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| |||||||| || || |||||||||| |||| |||| | |||||||||||||||||||||| |||||||||||| ||| |||  |||||||  ||    
T  44507062 aggaagagagaagatga-gagaaaagagaaagtatgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgttaaagagtgtattacca 44507160  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| | |||||||||||||||||||    
T  44507161 cctaagggtgtctatgtatcattactc 44507187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 127
Target Start/End: Original strand, 10621062 - 10621182
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| || |||||||||| | || |||||| || || | ||| |||||||||| |||||||||||| ||||||| ||||||||  ||    
T  10621062 aggaagagagaagagga-gagaaaagagaaagtgtgcttgtgcgggatcgatgtggctacgtgtcagatttttgtgtgggtgtcaaagggtgtattacca 10621160  T
Q  106 cctaaagatgtctatgtatcat 127  Q
    ||||| ||||||||||||||||    
T  10621161 cctaaggatgtctatgtatcat 10621182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 137
Target Start/End: Original strand, 43414556 - 43414686
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| || |||||||||| | || |||||| || |||| ||||| |||||| | |||||||||||| ||||||| ||||| ||| ||    
T  43414556 aggaagagagaagagga-gagaaaagagaaagtgtgcttgtgcgggatccatgtgaccacgtgttagatttttgtgtgggtgtcaaagggtgtgttgcca 43414654  T
Q  106 cctaaagatgtctatgtatcattactcctttt 137  Q
     |||| |||||||||||||||| |||| ||||    
T  43414655 tctaaggatgtctatgtatcataactcatttt 43414686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 132
Target Start/End: Original strand, 4854844 - 4854963
Alignment:
Q  12 agagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaa 111  Q
    ||||||||||| || |||||||||| | || |||||||||||||| ||| | || | ||| |||||| ||| | ||| ||| ||||||||| |||||||     
T  4854844 agagaagagga-gagaaaagagaaagtgtgcttgtgcagggtccatgtggccacatatcagatttttatgtaggtgttaaagggtgtattgccacctaag 4854942  T
Q  112 gatgtctatgtatcattactc 132  Q
    |||||||||||||||||||||    
T  4854943 gatgtctatgtatcattactc 4854963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 110
Target Start/End: Original strand, 8841407 - 8841510
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| ||  ||||||||| | || |||||| |||||||||||||||||||| | |||||||||||| ||||||| |||||| || ||    
T  8841407 aggaaaagagaagagga-gaggaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtactgcca 8841505  T
Q  106 cctaa 110  Q
    |||||    
T  8841506 cctaa 8841510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 132
Target Start/End: Original strand, 14055610 - 14055692
Alignment:
Q  50 gggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 132  Q
    |||||||||||||||| ||| | |||||||||||||||||||   |||||||||||||||| | |||| ||||||||| ||||    
T  14055610 gggtccacgtgactacatgtaagatttttgtgtggatgtcaaggagtgtattgtcacctaagggtgtcaatgtatcataactc 14055692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 64 - 132
Target Start/End: Original strand, 20074966 - 20075034
Alignment:
Q  64 acgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 132  Q
    |||||||| |||||| ||||| |||||||  |||||||| ||||||| |||||||||||||||||||||    
T  20074966 acgtgtcacatttttatgtgggtgtcaaagagtgtattgccacctaaggatgtctatgtatcattactc 20075034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 15258904 - 15258986
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtc 89  Q
    ||||| ||||||||||| ||  ||||||||||| || |||||||||||||||||||| || ||||| |||||| ||||||||||    
T  15258904 aggaagagagaagagga-gaggaaagagaaaatgtgcttgtgcagggtccacgtgaccacatgtcagatttttatgtggatgtc 15258986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 67 - 138
Target Start/End: Original strand, 30479509 - 30479580
Alignment:
Q  67 tgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactccttttt 138  Q
    ||||| |||||| ||||||||||||| ||||||||| ||||||| | ||| |||||||||| ||||||||||    
T  30479509 tgtcagatttttatgtggatgtcaaagggtgtattgccacctaagggtgtttatgtatcataactccttttt 30479580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 132
Target Start/End: Complemental strand, 17443949 - 17443825
Alignment:
Q  7 ggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcac 106  Q
    |||| ||||||||| ||||  ||||||||| | | ||||||  |||||||| ||||||| ||||| |||||||||||  ||| ||   ||||||||||||    
T  17443949 ggaagagagaagag-aagatgaaagagaaagtgtctttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcac 17443851  T
Q  107 ctaaagatgtctatgtatcattactc 132  Q
    |||| | |||||||||||||| ||||    
T  17443850 ctaaggttgtctatgtatcataactc 17443825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 138
Target Start/End: Original strand, 16056376 - 16056507
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||| ||||| ||||||||| | |  |||||| |||||||  || | || ||||| |||||||||||| ||||||  | ||||||||||    
T  16056376 aggaagagagaagag-aagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaagggatgtattgtca 16056474  T
Q  106 cctaaagatgtctatgtatcattactccttttt 138  Q
    | ||| ||||| |||||||||| |||| |||||    
T  16056475 cataaggatgtttatgtatcataactctttttt 16056507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 138
Target Start/End: Complemental strand, 16383502 - 16383371
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||| ||||| ||||||||| | |  |||||| |||||||  || | || ||||| |||||||||||| ||||||  ||||||||| ||    
T  16383502 aggaagagagaagag-aagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgcca 16383404  T
Q  106 cctaaagatgtctatgtatcattactccttttt 138  Q
    ||||| | ||| |||||||||| |||| |||||    
T  16383403 cctaagggtgtttatgtatcataactctttttt 16383371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 84
Target Start/End: Complemental strand, 9122310 - 9122233
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtgg 84  Q
    ||||| ||||||||||| || |||||||||| | || |||||| || ||||||||||||| ||||| ||||||||||||    
T  9122310 aggaagagagaagagga-gagaaaagagaaagtgtgcttgtgcgggatccacgtgactacatgtcagatttttgtgtgg 9122233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 50 - 132
Target Start/End: Complemental strand, 42221597 - 42221515
Alignment:
Q  50 gggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 132  Q
    |||||||  ||| ||||||||| |||||||||||| |||| |    ||||||||||||||| ||||| |||||||||||||||    
T  42221597 gggtccatatgattacgtgtcagatttttgtgtgggtgtccaggaatgtattgtcacctaaggatgtatatgtatcattactc 42221515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 34307341 - 34307216
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||| ||||| ||||||||| | |  |||||| |||| ||  || | || ||||| |||||||||||| ||||||  ||||||||| ||    
T  34307341 aggaagagagaagag-aagaagaaagagaaagtgtacttgtgcggggttcatatgtccacatgtcagatttttgtgtgggtgtcaaggggtgtattgcca 34307243  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| | ||| |||||||||| ||||    
T  34307242 cctaagggtgtttatgtatcataactc 34307216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 76; Significance: 3e-35; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 27 - 138
Target Start/End: Original strand, 8346383 - 8346494
Alignment:
Q  27 aaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatca 126  Q
    |||||||||| | || ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||||| || ||||||||||    
T  8346383 aaaagagaaagtgtgcttgtgcagggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaaggtgactatgtatca 8346482  T
Q  127 ttactccttttt 138  Q
    |||||| |||||    
T  8346483 ttactctttttt 8346494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 9474851 - 9474976
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| || |||||||||| | ||||||||| |||||||||||||||||||||| |||||||||||| ||||||| ||||||||| ||    
T  9474851 aggaagagagaagagga-gagaaaagagaaagtgtgtttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgcca 9474949  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| | |||||||||||||||||||    
T  9474950 cctaagggtgtctatgtatcattactc 9474976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 48716257 - 48716382
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| |||||||||||| | |||||| ||| | || |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||    
T  48716257 aggaagagagaagaggaa-agaaaagataaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaatggtgtattgcca 48716355  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| | |||||||||||||||||||    
T  48716356 cctaagggtgtctatgtatcattactc 48716382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 6 - 129
Target Start/End: Original strand, 44548351 - 44548473
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| |||||||| || || |||||||||| | || |||||| |||||||||||||||||||||| |||||||||||| | ||||||||||||||| ||    
T  44548351 aggaagagagaagaaga-gagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaatggtgtattgcca 44548449  T
Q  106 cctaaagatgtctatgtatcatta 129  Q
    ||||||||||||||||||||||||    
T  44548450 cctaaagatgtctatgtatcatta 44548473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 27564710 - 27564835
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| || |||||||||| | || |||||| |||||||||||| ||||||||| |||||||||||| ||||||| ||||||||| ||    
T  27564710 aggaagagagaagagga-gagaaaagagaaagtgtgcttgtgcggggtccacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgcca 27564808  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| |||||||||||||||||||||    
T  27564809 cctaaggatgtctatgtatcattactc 27564835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 2582040 - 2581915
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| || |||| ||||| | || |||||| |||||||||||||||||||||| |||||||||||| ||||||| ||||||||| ||    
T  2582040 aggaagagagaagagga-gagaaaaaagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgcca 2581942  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| | |||||||||||||||||||    
T  2581941 cctaagggtgtctatgtatcattactc 2581915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 38632296 - 38632421
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| || |||||| ||| | || |||||| |||||||||||||||||||||| |||||||||||||||| ||| ||||||||| ||    
T  38632296 aggaagagagaagagga-gagaaaagaaaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgttaaaaggtgtattgcca 38632394  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| | |||||||||||||||||||    
T  38632395 cctaagggtgtctatgtatcattactc 38632421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 51898658 - 51898783
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| ||  ||| ||||| | || |||||| || ||||||||||||||||||| |||||||||||| ||||||| ||||||||| ||    
T  51898658 aggaagagagaagagga-gaggaaatagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgcca 51898756  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    |||||||||||||||||||||||||||    
T  51898757 cctaaagatgtctatgtatcattactc 51898783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 6 - 137
Target Start/End: Complemental strand, 38595279 - 38595149
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| |||||||| || || |||||||||| | || |||| | |||||||||||||||||||||| |||||||||||| ||||||| ||||||||| ||    
T  38595279 aggaagagagaagatga-gagaaaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgcca 38595181  T
Q  106 cctaaagatgtctatgtatcattactcctttt 137  Q
    ||||||| ||| ||||||||||||||| ||||    
T  38595180 cctaaaggtgtttatgtatcattactcttttt 38595149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 41758930 - 41758805
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| || |||||||||| | ||||||||| ||||||| |||||||||||||| |||||||||||| ||||||| ||||||||| ||    
T  41758930 aggaagagagaagagga-gagaaaagagaaagtgtgtttgtgcggggtccatgtgactacgtgtcagatttttgtgtggttgtcaaagggtgtattgcca 41758832  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
      ||| | |||||||||||||||||||    
T  41758831 tttaatggtgtctatgtatcattactc 41758805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 3000444 - 3000319
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| |||||||| || || |||||||||| | || |||| | |||||||||||||||||||||| |||||||||||| ||||||| ||||||||| ||    
T  3000444 aggaagagagaagatga-gagaaaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgcca 3000346  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| | ||| |||||||||||||||    
T  3000345 cctaagggtgtttatgtatcattactc 3000319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 32813372 - 32813247
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| || |||||||||| | || |||||| ||||||| ||||| |||||||| |||||||||||| ||| ||| ||||||||| ||    
T  32813372 aggaagagagaagagga-gagaaaagagaaagtgtgcttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgcca 32813274  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| |||||||||||||||| ||||    
T  32813273 cctaaggatgtctatgtatcataactc 32813247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 47452295 - 47452420
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| || |||||||||| | || |||||| || ||||||||||||||||| | |||||||||||| ||||||| ||||||||  ||    
T  47452295 aggaagagagaagagga-gagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattacca 47452393  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| | |||||||||||||||||||    
T  47452394 cctaagggtgtctatgtatcattactc 47452420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 49811502 - 49811627
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| || |||||||||| | || |||||| | ||| |  || |||||||||| |||||||||||||||||||||||||||||||||    
T  49811502 aggaagagagaagagga-gagaaaagagaaagtgtgcttgtgcggagtctatatggctacgtgtcagatttttgtgtggatgtcaaatggtgtattgtca 49811600  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| ||||||||| |||||| ||||    
T  49811601 cctaaggatgtctatctatcataactc 49811627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 133
Target Start/End: Complemental strand, 43237 - 43131
Alignment:
Q  27 aaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatca 126  Q
    |||||||||| | || |||||| | |||||||||||||||||||| |||||||||||| ||||||| | ||||||||| |||||   |||||||||||||    
T  43237 aaaagagaaagtgtgcttgtgcggagtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgtctcctaagactgtctatgtatca 43138  T
Q  127 ttactcc 133  Q
    |||||||    
T  43137 ttactcc 43131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 37649323 - 37649198
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| || ||||| |||| | || |||||| |  | |||||||| |||||||| |||||||||||| |||||||  |||||||| ||    
T  37649323 aggaagagagaagagga-gagaaaagggaaagtgtgcttgtgcggaattcacgtgaccacgtgtcagatttttgtgtgggtgtcaaagagtgtattgcca 37649225  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    |||||||||||||||||||||||||||    
T  37649224 cctaaagatgtctatgtatcattactc 37649198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 45044535 - 45044660
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||| |||| |||||||||||| ||||||||| ||||||| ||| |||| ||||| |||||||| ||| ||||||||||||||||| ||    
T  45044535 aggaagagagaagag-aagagaaaagagaaaatgtgtttgtgcggggtccatgtggctacatgtcagatttttgtatgggtgtcaaatggtgtattgcca 45044633  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| ||  | |||||||||| ||||    
T  45044634 cctaaggaaatgtatgtatcataactc 45044660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 50630583 - 50630458
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| || |||||||||| | || |||||| |||||||||||||||||||||| |||||||||||| |  |||| | ||||||| ||    
T  50630583 aggaagagagaagagga-gagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtaacaaaggatgtattgcca 50630485  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| | | |||||||||||||||||    
T  50630484 cctaagggtatctatgtatcattactc 50630458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 43 - 129
Target Start/End: Complemental strand, 26274521 - 26274435
Alignment:
Q  43 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatta 129  Q
    ||||||||| |||||||||||| |||||| |||||| ||||||||||||||| ||||||| ||| ||| | ||||||||||||||||    
T  26274521 ttgtgcaggatccacgtgactatgtgtcagatttttctgtggatgtcaaatgatgtattgccacataagggtgtctatgtatcatta 26274435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 106
Target Start/End: Complemental strand, 13414866 - 13414787
Alignment:
Q  27 aaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcac 106  Q
    |||||||||||| || |||||  |||||||||||||||||||| | |||||||||||| ||||||| |||||||||||||    
T  13414866 aaaagagaaaatgtgcttgtgtggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattgtcac 13414787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 23597066 - 23597191
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| |||||| |||| || |||||| ||| | |||||||||| |||| ||||| | |||||||| |||||| ||||| | |||||  |||||||| ||    
T  23597066 aggaatagagaatagga-gagaaaagataaagtgtgtttgtgcaaggtcaacgtggccacgtgtcagatttttatgtgggtatcaaagagtgtattgcca 23597164  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| |||||||||||||||||||||    
T  23597165 cctaatgatgtctatgtatcattactc 23597191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 43 - 131
Target Start/End: Original strand, 11152389 - 11152476
Alignment:
Q  43 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattact 131  Q
    |||||| ||||| || ||||||||||||| ||||||||||||||||| || ||||||||| ||||| ||| ||||||||| ||||||||    
T  11152389 ttgtgcggggtctacatgactacgtgtcagatttttgtgtggatgtcgaagggtgtattgccacct-aaggtgtctatgtttcattact 11152476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 137
Target Start/End: Original strand, 5958975 - 5959105
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||| ||||| ||||||||| | |  |||||| |||||||  |||| || ||||| |||||||||||| ||||||  ||||||||| ||    
T  5958975 aggaagagagaagag-aagaagaaagagaaagtgtacttgtgcggggtccatatgaccacatgtcagatttttgtgtgggtgtcaagaggtgtattgcca 5959073  T
Q  106 cctaaagatgtctatgtatcattactcctttt 137  Q
    | ||| | ||| |||||||||| |||| ||||    
T  5959074 cttaagggtgtttatgtatcataactcttttt 5959105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 44334178 - 44334229
Alignment:
Q  40 tgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaa 91  Q
    ||||||||| ||||||| ||||||||||||||  ||||||||||||||||||    
T  44334178 tgtttgtgctgggtccatgtgactacgtgtcaggtttttgtgtggatgtcaa 44334229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 27 - 125
Target Start/End: Complemental strand, 26440839 - 26440741
Alignment:
Q  27 aaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatc 125  Q
    |||||||||| | || || ||| || |||| ||| | |||||||| |||||||||||| ||| ||| |||||||||||| |||| ||||||||| ||||    
T  26440839 aaaagagaaagtgtgcttatgcgggatccatgtggccacgtgtcagatttttgtgtgggtgttaaagggtgtattgtcatctaaggatgtctatctatc 26440741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 37926413 - 37926538
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||| |||| |||||||||| | |  |||| | || |||| ||| | |||||||| |||||| ||||| ||| ||| | ||||||| ||    
T  37926413 aggaagagagaagag-aagagaaaagagaaagtgtacttgtacgggatccatgtggccacgtgtcagatttttatgtgggtgttaaaagatgtattgcca 37926511  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||||||| |||||||||||| ||||    
T  37926512 cctaaagatatctatgtatcataactc 37926538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 50590975 - 50591100
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||| ||||| ||||||||| | |  |||||| |||||||  || | || ||||| |||||||||||| ||||||  ||||||||| ||    
T  50590975 aggaagagagaagag-aagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgcca 50591073  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| | ||| |||||||||| ||||    
T  50591074 cctaagggtgtttatgtatcataactc 50591100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 48489425 - 48489343
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtc 89  Q
    ||||| ||||||||||  || |||| ||||||| || |||||| || |||||||||| || ||||| |||||||||||||||||    
T  48489425 aggaagagagaagaggt-gagaaaatagaaaatgtgcttgtgcgggatccacgtgaccacatgtcagatttttgtgtggatgtc 48489343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 41608468 - 41608593
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||| ||||| ||||||||| | |  |||| | |||||||  || | || ||||| |||||||||||  ||||||  ||||||||| ||    
T  41608468 aggaagagagaagag-aagaagaaagagaaagtgtacttgtacggggtccatatggccacatgtcagatttttgtgtgagtgtcaaggggtgtattgcca 41608566  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| ||||| |||||||||| ||||    
T  41608567 cctaaggatgtttatgtatcataactc 41608593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 1e-34; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 6679823 - 6679698
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| || |||||||||||| ||||||||| ||||||| ||||| |||||||| |||||||||||| ||||||| ||||||||| ||    
T  6679823 aggaagagagaagagga-gagaaaagagaaaatgtgtttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgcca 6679725  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    |||||||||||||||||||||| ||||    
T  6679724 cctaaagatgtctatgtatcataactc 6679698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 40145532 - 40145407
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| || |||||||||| | || |||||| |||||||||||||||||||||| |||||||||||||||| ||| ||||||||| ||    
T  40145532 aggaagagagaagagga-gagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgttaaagggtgtattgcca 40145434  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| | |||||||||||||||||||    
T  40145433 cctaagggtgtctatgtatcattactc 40145407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 6 - 138
Target Start/End: Original strand, 18520859 - 18520990
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| || |||||||||| | || |||||| |||||||||||||||||||||| |||||||||||| ||||||| ||||||||| ||    
T  18520859 aggaagagagaagagga-gataaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgcca 18520957  T
Q  106 cctaaagatgtctatgtatcattactccttttt 138  Q
    ||||| | |||||||||||||||| || |||||    
T  18520958 cctaagggtgtctatgtatcattattctttttt 18520990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 2740399 - 2740274
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||| ||| || |||||||||| | || |||||| || ||||||||||||||||||| |||||||||||| ||||||| ||||||||| ||    
T  2740399 aggaagagagaagggga-gagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgcca 2740301  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| |||||||||||||||||||||    
T  2740300 cctaaggatgtctatgtatcattactc 2740274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 33149613 - 33149738
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| || |||||||||| | || |||||| || |||||||||||||||||||||||||||||||| ||||||| ||||||||  ||    
T  33149613 aggaagagagaagagga-gagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattacca 33149711  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| | |||||||||||||||||||    
T  33149712 cctaagggtgtctatgtatcattactc 33149738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 13811777 - 13811652
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| || | |||||||| | || |||||| |||||||||||||||||||||| |||||||||||| ||||||||| ||||||| ||    
T  13811777 aggaagagagaagagga-gagagaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatgatgtattgcca 13811679  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| | |||||||||||| ||||||    
T  13811678 cctaagggtgtctatgtatctttactc 13811652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 28177900 - 28177775
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| || |||||||| || |||||||||| | ||||||||| ||||||| ||||| |||||||| |||||||||||| ||||||| ||||||||| ||    
T  28177900 aggaagagggaagagga-gagaaaagagaaagtgtgtttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgcca 28177802  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| |||||||||||||||| ||||    
T  28177801 cctaaggatgtctatgtatcataactc 28177775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 36732917 - 36733042
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| || |||||||||| | || |||||| ||||||||||||||| |||||| |||||||||||| ||||||| |||||||||  |    
T  36732917 aggaagagagaagagga-gagaaaagagaaagtgtgcttgtgcggggtccacgtgactatgtgtcagatttttgtgtgggtgtcaaagggtgtattgcta 36733015  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| | |||||||||||||||||||    
T  36733016 cctaagggtgtctatgtatcattactc 36733042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 137
Target Start/End: Complemental strand, 14831939 - 14831809
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| ||||||| ||||| | || |||||| || ||||||||||||||||||| |||||| ||||| ||||||| ||||||||| ||    
T  14831939 aggaagagagaagagga-gaaaaaaaagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgcca 14831841  T
Q  106 cctaaagatgtctatgtatcattactcctttt 137  Q
    |||||   ||||||||||||||||||| ||||    
T  14831840 cctaagagtgtctatgtatcattactcatttt 14831809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 35785324 - 35785199
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| |||||||| || || |||||||||| | || |||||| || ||||||| ||||||||||| |||||||||||| ||||||| ||||||||| ||    
T  35785324 aggaagagagaagatga-gagaaaagagaaagtgtgattgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgcca 35785226  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| | |||||||||||||||||||    
T  35785225 cctaagggtgtctatgtatcattactc 35785199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 42414277 - 42414402
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| |||||||||||| | |||||| ||| | || |||||| |||||||| ||||||||||||| |||||||||||| ||||||| ||||||||| ||    
T  42414277 aggaagagagaagaggaa-agaaaagataaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgcca 42414375  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||  | |||||||||||||||||||    
T  42414376 cctactggtgtctatgtatcattactc 42414402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 15409585 - 15409710
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| || |||||||| | | || |||||| ||||||| ||| |||||||||| |||||||||||| |||||||   ||||||||||    
T  15409585 aggaagagagaagagga-gagaaaagagagagtgtgcttgtgcggggtccatgtggctacgtgtcagatttttgtgtgggtgtcaaagaatgtattgtca 15409683  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| |||||||||||||||| ||||    
T  15409684 cctaaggatgtctatgtatcataactc 15409710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 28 - 134
Target Start/End: Original strand, 35943888 - 35943994
Alignment:
Q  28 aaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcat 127  Q
    ||||||||| | || |||||  || ||||||| ||||||||||| |||||||||||| ||||||||| ||||||| ||||||| | ||||||||||||||    
T  35943888 aaagagaaagtgtgcttgtgtgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatgatgtattgccacctaagggtgtctatgtatcat 35943987  T
Q  128 tactcct 134  Q
     ||||||    
T  35943988 aactcct 35943994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 26720641 - 26720516
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||| |||| |||||||||| | || |||||| || |||| ||| | |||||||| |||||| ||| | ||| ||| ||||||||| ||    
T  26720641 aggaagagagaagag-aagagaaaagagaaagtgtgcttgtgcgggatccatgtggccacgtgtcagatttttttgtaggtgttaaagggtgtattgcca 26720543  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| |||||||||||||||| ||||    
T  26720542 cctaaggatgtctatgtatcataactc 26720516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 26990390 - 26990265
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||| |||| |||||||||| | || |||||| || |||| ||| | |||||||| |||||| ||| | ||| ||| ||||||||| ||    
T  26990390 aggaagagagaagag-aagagaaaagagaaagtgtgcttgtgcgggatccatgtggccacgtgtcagatttttttgtaggtgttaaagggtgtattgcca 26990292  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| |||||||||||||||| ||||    
T  26990291 cctaaggatgtctatgtatcataactc 26990265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 31009113 - 31008988
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||| ||||  ||| ||||| | || |||||| || ||||||||||||||||||| |||||||||||| |||  ||   ||||||||||    
T  31009113 aggaagagagaagag-aagaggaaatagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtggaagaatgtattgtca 31009015  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| ||||| |||||||||| ||||    
T  31009014 cctaaggatgtttatgtatcataactc 31008988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 131
Target Start/End: Original strand, 36875587 - 36875702
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| ||||||||||||| | || |||||| || ||||||||||||         ||||||||||| ||||||| ||||||||| ||    
T  36875587 aggaagagagaagagga-gaaaaaagagaaagtgtgcttgtgcgggatccacgtgacta---------tttttgtgtgggtgtcaaagggtgtattgcca 36875676  T
Q  106 cctaaagatgtctatgtatcattact 131  Q
    ||||| | ||||||||||||||||||    
T  36875677 cctaagggtgtctatgtatcattact 36875702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 43 - 132
Target Start/End: Original strand, 41470427 - 41470516
Alignment:
Q  43 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 132  Q
    |||||| |||||||||||||||||||||| |||||| | || || | ||| | ||||||| ||||||||| ||||||||||| |||||||    
T  41470427 ttgtgcggggtccacgtgactacgtgtcagatttttatatgaattttaaaggatgtattgccacctaaaggtgtctatgtattattactc 41470516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 2252143 - 2252268
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||| ||||| ||||||||| | |  |||||| |||||||  || | || ||||| |||||||||||| ||||||  ||||||||| ||    
T  2252143 aggaagagagaagag-aagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgcca 2252241  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| ||||| |||||||||| ||||    
T  2252242 cctaaggatgtttatgtatcataactc 2252268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 20073491 - 20073616
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| ||  ||| ||||| | || ||||||||||||||||||   |||||  | |||||| ||||  ||||||| ||||||||||||    
T  20073491 aggaagagagaagagga-gaggaaatagaaagtgtgcttgtgcagggtccacgtggtcacgtgcaagatttttatgtgagtgtcaaagggtgtattgtca 20073589  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
     |||| ||||||||| |||||||||||    
T  20073590 tctaatgatgtctatatatcattactc 20073616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 134
Target Start/End: Original strand, 33825299 - 33825426
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||| |||| |||||||||| | || ||||| | ||| ||| |||  |||||||| |||||| ||||| ||||||   |||||||| ||    
T  33825299 aggaagagagaagag-aagataaaagagaaagtgtgcttgtgtaaggttcacatgaacacgtgtcagatttttatgtgggtgtcaaggagtgtattgcca 33825397  T
Q  106 cctaaagatgtctatgtatcattactcct 134  Q
    |||||  ||||||||| ||||||||||||    
T  33825398 cctaagaatgtctatgcatcattactcct 33825426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 86
Target Start/End: Complemental strand, 31132449 - 31132390
Alignment:
Q  27 aaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggat 86  Q
    |||||| ||| |||| |||||| |||||||||||||||| ||||| ||||||||||||||    
T  31132449 aaaagaaaaagtatgcttgtgcggggtccacgtgactacttgtcagatttttgtgtggat 31132390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 3921240 - 3921365
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||| ||||| ||||||||| | |  |||||| |||||||  || | || ||||| |||||||||||| ||||||  ||||||||| ||    
T  3921240 aggaagagagaagag-aagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgcca 3921338  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| | ||| |||||||||| ||||    
T  3921339 cctaagggtgtttatgtatcataactc 3921365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 21370108 - 21370052
Alignment:
Q  28 aaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtgg 84  Q
    ||||||||||| ||||||||| ||||||||||||| || ||||| ||||||| ||||    
T  21370108 aaagagaaaatgtgtttgtgcggggtccacgtgaccacatgtcagatttttgagtgg 21370052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 132
Target Start/End: Original strand, 6260020 - 6260101
Alignment:
Q  51 ggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 132  Q
    |||||| ||||| | |||| | ||||||| |||| ||| ||| ||||||||||||||||  | ||| |||||||||||||||    
T  6260020 ggtccatgtgaccatgtgttagatttttgcgtgggtgttaaagggtgtattgtcacctatggttgtgtatgtatcattactc 6260101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 1e-34; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 41236472 - 41236347
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| || |||||||||| | || |||||| |||||||||||||||||||||| |||||||||||||||||||| ||||||||| ||    
T  41236472 aggaagagagaagagga-gagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaaaggtgtattgcca 41236374  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| | |||||||||||||||||||    
T  41236373 cctaagggtgtctatgtatcattactc 41236347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 6 - 138
Target Start/End: Original strand, 480422 - 480553
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| || |||||||||| | || |||| | |||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||    
T  480422 aggaagagagaagagga-gagaaaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtca 480520  T
Q  106 cctaaagatgtctatgtatcattactccttttt 138  Q
    ||||| | ||||||||||||||||||| |||||    
T  480521 cctaagggtgtctatgtatcattactctttttt 480553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 6 - 138
Target Start/End: Original strand, 50052403 - 50052534
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| ||  ||||||||| | || |||||| |||||||||||||||||||||| |||||||||||| ||||||| ||||||||| ||    
T  50052403 aggaagagagaagagga-gaggaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgcca 50052501  T
Q  106 cctaaagatgtctatgtatcattactccttttt 138  Q
    ||||| ||||||||||||||||||||| |||||    
T  50052502 cctaaggatgtctatgtatcattactctttttt 50052534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 54473508 - 54473633
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| || |||||| ||| | || |||||| |||||||||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  54473508 aggaagagagaagagga-gagaaaagataaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaatggtgtattgtca 54473606  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| | |||||||||||||||||||    
T  54473607 cctaagggtgtctatgtatcattactc 54473633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 29240011 - 29239886
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| ||  ||||||||| | || |||||  |||||||||||||||||||| | |||||||||||||||||||||||||||||| ||    
T  29240011 aggaagagagaagagga-gaggaaagagaaagtgtgcttgtgtggggtccacgtgactacgtgttagatttttgtgtggatgtcaaatggtgtattgcca 29239913  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| | |||||||||||||||||||    
T  29239912 cctaagggtgtctatgtatcattactc 29239886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 12 - 132
Target Start/End: Original strand, 11511443 - 11511562
Alignment:
Q  12 agagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaa 111  Q
    ||||||||| |||| |||||||||| | || |||||| |||||||||||||||||||||| |||||| ||||| ||||||| ||||||||| |||||||     
T  11511443 agagaagag-aagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaag 11511541  T
Q  112 gatgtctatgtatcattactc 132  Q
    | |||||||||||||||||||    
T  11511542 ggtgtctatgtatcattactc 11511562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 12 - 132
Target Start/End: Original strand, 48183030 - 48183149
Alignment:
Q  12 agagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaa 111  Q
    ||||||||||| || |||||||||| | || |||||| |||||||||||||||||||||| |||||||||||| ||||||| ||||||||| ||| |||     
T  48183030 agagaagagga-gagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacgtaag 48183128  T
Q  112 gatgtctatgtatcattactc 132  Q
    | |||||||||||||||||||    
T  48183129 ggtgtctatgtatcattactc 48183149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 6 - 141
Target Start/End: Original strand, 42044342 - 42044476
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| || |||||||||| | || |||||| |||||||||||||||||||||| |||||||||||| |||  || | ||||||| ||    
T  42044342 aggaagagagaagagga-gagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtacaaggatgtattgcca 42044440  T
Q  106 cctaaagatgtctatgtatcattactcctttttaaa 141  Q
    ||||| | ||||||||||||||||||| ||||||||    
T  42044441 cctaagggtgtctatgtatcattactcttttttaaa 42044476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 6034169 - 6034044
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| || |||||||||| | || |||||| || ||||||||||||| ||||| |||||||||||| ||||||| ||||||||| ||    
T  6034169 aggaagagagaagagga-gagaaaagagaaagtgtgcttgtgcgggatccacgtgactacatgtcagatttttgtgtgggtgtcaaagggtgtattgcca 6034071  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| | |||||||||||||||||||    
T  6034070 cctaagggtgtctatgtatcattactc 6034044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 12 - 132
Target Start/End: Original strand, 24995088 - 24995207
Alignment:
Q  12 agagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaa 111  Q
    ||||||||||| || |||||||||||| || |||||| ||||||||||||||||||||||||||||| ||||| ||||||| ||||||||| || ||||     
T  24995088 agagaagagga-gagaaaagagaaaatgtgcttgtgcggggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgccatctaag 24995186  T
Q  112 gatgtctatgtatcattactc 132  Q
    | |||| || |||||||||||    
T  24995187 ggtgtccatatatcattactc 24995207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 53 - 132
Target Start/End: Original strand, 50526192 - 50526271
Alignment:
Q  53 tccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 132  Q
    |||||||||| |||||||| |||||||||||| ||||||| ||||||||| |||||||||||||||||||||||||||||    
T  50526192 tccacgtgaccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatcattactc 50526271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 23608360 - 23608235
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| || |||||||||| | || |||||  | || ||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  23608360 aggaagagagaagagga-gataaaagagaaagtgtgcttgtgtggagttcacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgtca 23608262  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
     |||| | ||||||| |||||||||||    
T  23608261 tctaagggtgtctatatatcattactc 23608235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 28 - 132
Target Start/End: Complemental strand, 3481758 - 3481654
Alignment:
Q  28 aaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcat 127  Q
    ||||||||| | || |||||  ||||||||||||||| |||||| |||||||||||| |||||||  |||||||| ||||||||| ||||||||||||||    
T  3481758 aaagagaaagtgtgcttgtgtggggtccacgtgactatgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaaaggtgtctatgtatcat 3481659  T
Q  128 tactc 132  Q
    |||||    
T  3481658 tactc 3481654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 29234220 - 29234345
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| || |||||||||| | || |||||| |||||||||||||||||||||| |||||||||  | | ||||| ||||||||| ||    
T  29234220 aggaagagagaagagga-gagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgaaggtatcaaagggtgtattgcca 29234318  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
     |||| | |||||||||||||||||||    
T  29234319 tctaagggtgtctatgtatcattactc 29234345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 31910317 - 31910192
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| |||||||| || || |||||||||| | || |||||| ||||||| ||| ||| |||||| |||||||||||| |||||||  |||||||||||    
T  31910317 aggaagagagaagatga-gagaaaagagaaagtgtgcttgtgcggggtccatgtggctatgtgtcagatttttgtgtgggtgtcaaagagtgtattgtca 31910219  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| |||||||||||||||| ||||    
T  31910218 cctaaggatgtctatgtatcataactc 31910192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 55475316 - 55475191
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||| ||||| ||||||||| | |  || |||||||||||  || | || ||||| |||||||||||| ||||||| ||||||||| ||    
T  55475316 aggaagagagaagag-aagaagaaagagaaagtgtacttatgcagggtccatatggccacatgtcagatttttgtgtgggtgtcaaagggtgtattgcca 55475218  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| ||||| |||||||||| ||||    
T  55475217 cctaaggatgtttatgtatcataactc 55475191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 127
Target Start/End: Original strand, 53352541 - 53352660
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| || |||||||||| |||| |||||| |||||||| | ||||||||||| |||||||||| | ||| |||   ||||||| ||    
T  53352541 aggaagagagaagagga-gagaaaagagaaagtatgcttgtgcggggtccacttaactacgtgtcagatttttgtgtaggtgttaaagaatgtattg-ca 53352638  T
Q  106 cctaaagatgtctatgtatcat 127  Q
    ||||| | ||||||||||||||    
T  53352639 cctaagggtgtctatgtatcat 53352660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 65 - 132
Target Start/End: Complemental strand, 40574846 - 40574779
Alignment:
Q  65 cgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 132  Q
    ||||||| |||||||||||| ||||||| ||||||||  ||||||| |||||||||||||||| ||||    
T  40574846 cgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaggatgtctatgtatcataactc 40574779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 64 - 132
Target Start/End: Complemental strand, 47104612 - 47104544
Alignment:
Q  64 acgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 132  Q
    ||||||||||||||||||||| ||||| |  ||||||||||| ||||  |||||||| |||||||||||    
T  47104612 acgtgtcaaatttttgtgtgggtgtcagagagtgtattgtcatctaagaatgtctatatatcattactc 47104544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 124
Target Start/End: Original strand, 28480243 - 28480360
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| ||  || |||||| | ||||||||  |||||||| ||||||| ||||| |||||||||||  ||| ||   |||||||||||    
T  28480243 aggaagagagaagagga-gatgaaggagaaagtgtgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtca 28480341  T
Q  106 cctaaagatgtctatgtat 124  Q
    ||||| | |||||||||||    
T  28480342 cctaaggttgtctatgtat 28480360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 124
Target Start/End: Original strand, 28481118 - 28481235
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| ||  || |||||| | ||||||||  |||||||| ||||||| ||||| |||||||||||  ||| ||   |||||||||||    
T  28481118 aggaagagagaagagga-gatgaaggagaaagtgtgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtca 28481216  T
Q  106 cctaaagatgtctatgtat 124  Q
    ||||| | |||||||||||    
T  28481217 cctaaggttgtctatgtat 28481235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 124
Target Start/End: Original strand, 28481993 - 28482110
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| ||  || |||||| | ||||||||  |||||||| ||||||| ||||| |||||||||||  ||| ||   |||||||||||    
T  28481993 aggaagagagaagagga-gatgaaggagaaagtgtgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtca 28482091  T
Q  106 cctaaagatgtctatgtat 124  Q
    ||||| | |||||||||||    
T  28482092 cctaaggttgtctatgtat 28482110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 84
Target Start/End: Complemental strand, 41824007 - 41823930
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtgg 84  Q
    ||||| |||||||| || || |||||||||| | || |||||| ||||||| |||||||||||||| ||||||||||||    
T  41824007 aggaagagagaagaaga-gagaaaagagaaagtgtgcttgtgcggggtccatgtgactacgtgtcagatttttgtgtgg 41823930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 48647701 - 48647826
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| ||  ||||||||| | || |||||| | ||||||||||| |||||| | |||||| ||||| ||| ||  |||||||||| |    
T  48647701 aggaagagagaagagga-gaggaaagagaaattgtgcttgtgcggagtccacgtgaccacgtgttagatttttatgtgggtgttaagaggtgtattgtta 48647799  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| ||||| ||||| |||| ||||    
T  48647800 cctaaggatgtttatgtgtcataactc 48647826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 132
Target Start/End: Complemental strand, 29977989 - 29977885
Alignment:
Q  28 aaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcat 127  Q
    ||||||||| | || |||||  |||||||  ||||||||||||| |||||||||||| ||| ||  ||||||||| ||||||  | | | ||||||||||    
T  29977989 aaagagaaagtgtgcttgtgtggggtccatatgactacgtgtcagatttttgtgtgggtgttaaggggtgtattgccacctatggttctgtatgtatcat 29977890  T
Q  128 tactc 132  Q
    |||||    
T  29977889 tactc 29977885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 100
Target Start/End: Original strand, 56300161 - 56300233
Alignment:
Q  28 aaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtat 100  Q
    ||||||||| | |||||||||||| | ||  |||| || ||||| |||||||||||||||||||||| |||||    
T  56300161 aaagagaaagtgtgtttgtgcaggattcatatgaccacatgtcagatttttgtgtggatgtcaaatgatgtat 56300233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 19670691 - 19670816
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||| ||||| ||||||||| | |  |||||| |||||||  || | || ||||| |||||||||||  ||||||  ||||||||| ||    
T  19670691 aggaagagagaagag-aagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgagtgtcaaggggtgtattgcca 19670789  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| | ||| |||||||||| ||||    
T  19670790 cctaagggtgtttatgtatcataactc 19670816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 47986333 - 47986208
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||| || || ||||||||| | |  |||||| |||||||  || | || ||||| |||||||||||||||||||  | ||||||| ||    
T  47986333 aggaagagagaagag-aataagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtggatgtcaagggatgtattgcca 47986235  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| | ||| |||||||||| ||||    
T  47986234 cctaagggtgtttatgtatcataactc 47986208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 132
Target Start/End: Original strand, 29547994 - 29548059
Alignment:
Q  67 tgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 132  Q
    ||||| |||||||||||| ||||||  | ||||||| ||||||| ||||| |||||||||| ||||    
T  29547994 tgtcagatttttgtgtgggtgtcaagggatgtattgccacctaaggatgtttatgtatcataactc 29548059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 132
Target Start/End: Original strand, 44536781 - 44536845
Alignment:
Q  67 tgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 132  Q
    ||||| ||||||||||||||||| || ||||||||| ||||||||  ||| |||||||||| ||||    
T  44536781 tgtcagatttttgtgtggatgtc-aagggtgtattgccacctaaaagtgtttatgtatcataactc 44536845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 110
Target Start/End: Original strand, 17983718 - 17983821
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||| ||||| ||||||||| | |  |||||| |||||||  || | || ||||| |||||||||||| ||||||  ||||||||| ||    
T  17983718 aggaagagagaagag-aagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgcca 17983816  T
Q  106 cctaa 110  Q
    |||||    
T  17983817 cctaa 17983821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 72; Significance: 8e-33; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 6 - 129
Target Start/End: Original strand, 19930795 - 19930917
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| || |||||||||| | ||||||||| |||||||| ||||||||||||| |||||||||||||||||||| ||||||||| ||    
T  19930795 aggaagagagaagagga-gagaaaagagaaagtgtgtttgtgcggggtccacatgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgcca 19930893  T
Q  106 cctaaagatgtctatgtatcatta 129  Q
    ||||| | ||||||||||||||||    
T  19930894 cctaagggtgtctatgtatcatta 19930917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 10249357 - 10249482
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||| ||||||| || |||||||||| | || |||||| |||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||    
T  10249357 aggaagagaaaagagga-gagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtca 10249455  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| | |||||||||||||||||||    
T  10249456 cctaagggtgtctatgtatcattactc 10249482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 13438468 - 13438343
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| || |||||||||| | || |||||| |||||||||||||||||||||| |||||||||||| ||||||| | ||||||||||    
T  13438468 aggaagagagaagagga-gagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgtca 13438370  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| | |||||||||||||||||||    
T  13438369 cctaagggtgtctatgtatcattactc 13438343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 12 - 132
Target Start/End: Original strand, 32505629 - 32505748
Alignment:
Q  12 agagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaa 111  Q
    ||||||||||| || |||| ||||| | || |||||| |||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||     
T  32505629 agagaagagga-gagaaaatagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaag 32505727  T
Q  112 gatgtctatgtatcattactc 132  Q
    | |||||||||||||||||||    
T  32505728 ggtgtctatgtatcattactc 32505748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 6 - 129
Target Start/End: Complemental strand, 28863580 - 28863458
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| || |||||||||| | || |||||| |||||||||||||||||||||| |||||||||||| ||||||| ||||||||| ||    
T  28863580 aggaagagagaagagga-gataaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgcca 28863482  T
Q  106 cctaaagatgtctatgtatcatta 129  Q
    ||||| | ||||||||||||||||    
T  28863481 cctaagggtgtctatgtatcatta 28863458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 9058605 - 9058480
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| || |||||||||| | || |||||| |||||||| ||||||||||||| |||||||||||| ||||||| ||||||||| ||    
T  9058605 aggaagagagaagagga-gagaaaagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgcca 9058507  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| | |||||||||||||||||||    
T  9058506 cctaagggtgtctatgtatcattactc 9058480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 134
Target Start/End: Complemental strand, 17473145 - 17473018
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| || |||||||||| | || |||||| || ||||||||||||||||||| |||||||||||| ||||||| ||||||||| ||    
T  17473145 aggaagagagaagagga-gagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgcca 17473047  T
Q  106 cctaaagatgtctatgtatcattactcct 134  Q
     |||| | |||||||||||||||||||||    
T  17473046 tctaagggtgtctatgtatcattactcct 17473018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 40701603 - 40701478
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| |||||||| || || |||||||||| | || |||||| |||||||||| ||||||||||| |||||||||||| ||||||| ||||||||| ||    
T  40701603 aggaagagagaagatga-gagaaaagagaaagtgtgattgtgcggggtccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgcca 40701505  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| | |||||||||||||||||||    
T  40701504 cctaagggtgtctatgtatcattactc 40701478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 28 - 132
Target Start/End: Original strand, 33436096 - 33436200
Alignment:
Q  28 aaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcat 127  Q
    ||||||||| | || |||||| |||||||||||||||||||| | |||||||||||| ||||||| ||||||||| ||||||| | ||||||||||||||    
T  33436096 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 33436195  T
Q  128 tactc 132  Q
    |||||    
T  33436196 tactc 33436200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 53 - 132
Target Start/End: Complemental strand, 4060764 - 4060685
Alignment:
Q  53 tccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 132  Q
    ||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||    
T  4060764 tccacgtaactacgtgtcagatttttgtgtggatgtcaaaaggtgtattgtcacctaagggtgtctatgtatcattactc 4060685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 7465710 - 7465835
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| |||||||| || || |||||||||| | || |||||  |||||||||||||||||||||| |||||||||||| ||||||| ||||||||| ||    
T  7465710 aggaagagagaagaaga-gataaaagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgcca 7465808  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
     |||| | |||||||||||||||||||    
T  7465809 tctaagggtgtctatgtatcattactc 7465835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 132
Target Start/End: Original strand, 5574475 - 5574588
Alignment:
Q  19 aggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtct 118  Q
    ||||||| |||||||||| | || |||||| || ||||||||||||||||||| |||||| ||||| ||||||| ||||||||| |||||||   |||||    
T  5574475 aggaagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagagtgtct 5574574  T
Q  119 atgtatcattactc 132  Q
    ||||||||||||||    
T  5574575 atgtatcattactc 5574588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 28 - 132
Target Start/End: Complemental strand, 27864808 - 27864704
Alignment:
Q  28 aaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcat 127  Q
    ||||||||| | || || ||| |||||||||||| ||||||||| |||||||||||||||||||| ||||||||| ||| ||| | ||||||||||||||    
T  27864808 aaagagaaagtgtgcttttgcggggtccacgtgattacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 27864709  T
Q  128 tactc 132  Q
    |||||    
T  27864708 tactc 27864704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 20700940 - 20700815
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| ||  ||||||||| | || || ||| |||||||||||||||||||||| |||||||||| |  |||||| ||||||||| ||    
T  20700940 aggaagagagaagagga-gaggaaagagaaagtgtgcttatgcggggtccacgtgactacgtgtcagatttttgtgtaggagtcaaagggtgtattgcca 20700842  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    | ||| |||||||||||||||||||||    
T  20700841 cataaggatgtctatgtatcattactc 20700815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 28381630 - 28381755
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| |||||||| || || |||||||||| | || |||||| | ||||| |||||||||||||| |||||||||||| |||| || ||||||||| ||    
T  28381630 aggaagagagaagatga-gagaaaagagaaagtgtgcttgtgcggagtccatgtgactacgtgtcagatttttgtgtgggtgtcgaaaggtgtattgcca 28381728  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| | |||||||||||||||||||    
T  28381729 cctaagggtgtctatgtatcattactc 28381755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 30915588 - 30915463
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| |||||||| || || |||||||||| | || |||| | |||||||||||||||||||||| |||||| |||||  |||||| ||||||||| ||    
T  30915588 aggaagagagaagatga-gagaaaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttatgtgggggtcaaagggtgtattgcca 30915490  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| | |||||||||||||||||||    
T  30915489 cctaagggtgtctatgtatcattactc 30915463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 50 - 132
Target Start/End: Original strand, 38882832 - 38882913
Alignment:
Q  50 gggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 132  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||| ||||| ||||||| | |||||||||||||||||||    
T  38882832 gggtccacgtgactacgtgtcagatttttgtgtggatgtcaaagggt-tattgccacctaagggtgtctatgtatcattactc 38882913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 42257310 - 42257193
Alignment:
Q  14 agaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaaga 113  Q
    ||||||||| || |||||||||| | || |||||| ||||||| ||| | |||||||| |||||| ||||| ||||||||| ||||||| ||||||||||    
T  42257310 agaagagga-gagaaaagagaaagtgtgcttgtgcggggtccatgtggccacgtgtcagatttttatgtgggtgtcaaatgatgtattgccacctaaaga 42257212  T
Q  114 tgtctatgtatcattactc 132  Q
    |||||||||||||| ||||    
T  42257211 tgtctatgtatcataactc 42257193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 40613897 - 40614002
Alignment:
Q  27 aaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatca 126  Q
    |||||||||| | || |||||| ||||||| ||| | |||||||| |||||||||||| ||||||| ||||||||| ||||||| |||||||||||||||    
T  40613897 aaaagagaaagtgtgcttgtgcggggtccatgtggccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatca 40613996  T
Q  127 ttactc 132  Q
    | ||||    
T  40613997 taactc 40614002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 17819979 - 17820104
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| ||  ||||||||||| ||||||||  |||||||||| || || ||||| |||||||||||| ||||||  ||||||||| ||    
T  17819979 aggaagagagaagagga-gatgaaagagaaaatgtgtttgtgtggggtccacgtaaccacatgtcagatttttgtgtgggtgtcaaggggtgtattgcca 17820077  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    |||| || |||||||||||||| ||||    
T  17820078 cctatagttgtctatgtatcataactc 17820104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 36168961 - 36168836
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| |||||| |||| || |||||||||| |||| |||||| ||||||| ||| | |||||||||||||||||||||  || ||| | ||||||||||    
T  36168961 aggaagagagaatagga-gagaaaagagaaagtatgcttgtgcggggtccatgtggccacgtgtcaaatttttgtgtgggagttaaaggatgtattgtca 36168863  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
     |||| |||||||||||||||| ||||    
T  36168862 tctaaggatgtctatgtatcataactc 36168836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 50 - 131
Target Start/End: Complemental strand, 41575219 - 41575138
Alignment:
Q  50 gggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattact 131  Q
    |||||||| |||| || ||||||||||||||||| |||||||| ||||||||  || |||| ||||||||||||||||||||    
T  41575219 gggtccacatgaccacatgtcaaatttttgtgtgaatgtcaaagggtgtattaccatctaaggatgtctatgtatcattact 41575138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 38273117 - 38273242
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| |||||| |||| || |||||||||| | || | |||| ||||||| ||| |||||||||| |||||||||||| ||| ||| ||||||||| ||    
T  38273117 aggaagagagaatagga-gagaaaagagaaagtgtgctagtgcggggtccatgtggctacgtgtcagatttttgtgtgggtgttaaagggtgtattgcca 38273215  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
     ||||  ||||||||||||||| ||||    
T  38273216 tctaagaatgtctatgtatcataactc 38273242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 132
Target Start/End: Complemental strand, 2533247 - 2533124
Alignment:
Q  7 ggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcac 106  Q
    |||| ||||||||||| || |||||| ||| | || |||||| ||||| | ||| |||||||||| |||||||||||| ||||||| | ||||||| |||    
T  2533247 ggaagagagaagagga-gataaaagaaaaagtgtgcttgtgcggggtctatgtggctacgtgtcagatttttgtgtgg-tgtcaaaggatgtattgccac 2533150  T
Q  107 ctaaagatgtctatgtatcattactc 132  Q
     ||| |||||||||||||||| ||||    
T  2533149 ttaaggatgtctatgtatcataactc 2533124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 64 - 132
Target Start/End: Complemental strand, 33436279 - 33436211
Alignment:
Q  64 acgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 132  Q
    |||||||| |||||| ||||| ||||||| ||||||||| || |||| |||||||||||||||||||||    
T  33436279 acgtgtcagatttttatgtgggtgtcaaaaggtgtattgccatctaaggatgtctatgtatcattactc 33436211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 26891479 - 26891604
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||| ||||  ||||||||||| || |||| |  |||||||||||| || ||||| |||||||||||| |||| |  ||||||||| ||    
T  26891479 aggaagagagaagag-aagaggaaagagaaaatgtgcttgttcgaggtccacgtgaccacatgtcagatttttgtgtgggtgtctaggggtgtattgcca 26891577  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| | || ||||||||||| ||||    
T  26891578 cctaagggtggctatgtatcataactc 26891604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 134
Target Start/End: Complemental strand, 38732479 - 38732352
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||| ||||| ||||||||| | |  |||||| |||||||  |||| || ||||| |||||||||||| ||||||  | ||||||||||    
T  38732479 aggaagagagaagag-aagaagaaagagaaagtgtacttgtgcggggtccatatgaccacatgtcagatttttgtgtgggtgtcaagggatgtattgtca 38732381  T
Q  106 cctaaagatgtctatgtatcattactcct 134  Q
    | ||| | ||| |||||||||| ||||||    
T  38732380 cataagggtgtttatgtatcataactcct 38732352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 43490246 - 43490121
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||| ||||| ||||| ||| | |  |||||| |||||||  || | || ||||| |||||||||||| ||||||  ||||||||||||    
T  43490246 aggaagagagaagag-aagaagaaagataaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgtca 43490148  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| | ||| |||||||||| ||||    
T  43490147 cctaagggtgtttatgtatcataactc 43490121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 110
Target Start/End: Original strand, 2997462 - 2997565
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||| ||||| ||||||||| | |  |||||| |||||||  || | || ||||| |||||||||||| ||||||  ||||||||| ||    
T  2997462 aggaagagagaagag-aagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgcca 2997560  T
Q  106 cctaa 110  Q
    |||||    
T  2997561 cctaa 2997565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 71; Significance: 3e-32; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 19329967 - 19329842
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| || |||||||||| | || |||||| |||||||||||| ||||||||| |||||||||||| ||||||| ||||||||| ||    
T  19329967 aggaagagagaagagga-gagaaaagagaaagtgtgcttgtgcggggtccacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgcca 19329869  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| |||||||||||||||||||||    
T  19329868 cctaaggatgtctatgtatcattactc 19329842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 38267165 - 38267040
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| || |||||||||| | || |||||| |||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||    
T  38267165 aggaagagagaagagga-gagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtca 38267067  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    | ||| | |||||||||||||||||||    
T  38267066 cataagggtgtctatgtatcattactc 38267040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 6 - 138
Target Start/End: Complemental strand, 35137658 - 35137527
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| || |||||||||| | ||||||||| |||||||||||||||||||| | |||||||||||| ||||||| ||||||||| ||    
T  35137658 aggaagagagaagagga-gagaaaagagaaagtgtgtttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattgcca 35137560  T
Q  106 cctaaagatgtctatgtatcattactccttttt 138  Q
    ||||| | ||||||| ||||||||||| |||||    
T  35137559 cctaagggtgtctatttatcattactcattttt 35137527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 6 - 133
Target Start/End: Original strand, 4999489 - 4999615
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| || |||||||||| | ||||||||| |||||||||||||||||| ||| |||||||||||| ||||||| ||||||||| ||    
T  4999489 aggaagagagaagagga-gataaaagagaaagtgtgtttgtgcggggtccacgtgactacgtatcagatttttgtgtgggtgtcaaaaggtgtattgcca 4999587  T
Q  106 cctaaagatgtctatgtatcattactcc 133  Q
     |||| | ||||||||||||||||||||    
T  4999588 tctaagggtgtctatgtatcattactcc 4999615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 21 - 132
Target Start/End: Original strand, 19436176 - 19436287
Alignment:
Q  21 gaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctat 120  Q
    ||||| |||||||||| | || || ||| || ||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||| |||||||||    
T  19436176 gaagagaaaagagaaagtgtgcttatgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaaggatgtctat 19436275  T
Q  121 gtatcattactc 132  Q
    ||||||||||||    
T  19436276 gtatcattactc 19436287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 8080358 - 8080483
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| || |||||||||| | || |||||| |||||||||||||||||||||| |||||| ||| | ||||||| ||||||||| ||    
T  8080358 aggaagagagaagagga-gagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgcca 8080456  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| | |||||||||||||||||||    
T  8080457 cctaagggtgtctatgtatcattactc 8080483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 3434667 - 3434562
Alignment:
Q  27 aaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatca 126  Q
    |||||||||| | || |||||| || |||||||||||||||||||  ||||||||||| ||||||| ||||||||| ||||||| |||||||||||||||    
T  3434667 aaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagttttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatca 3434568  T
Q  127 ttactc 132  Q
    ||||||    
T  3434567 ttactc 3434562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 7389494 - 7389389
Alignment:
Q  27 aaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatca 126  Q
    |||||||||| | || |||||| |||||||||||||||||||||| |||||||||||| |||||||  |||||||| ||||||| | |||||||||||||    
T  7389494 aaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatca 7389395  T
Q  127 ttactc 132  Q
    ||||||    
T  7389394 ttactc 7389389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 19 - 132
Target Start/End: Original strand, 36361900 - 36362013
Alignment:
Q  19 aggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtct 118  Q
    ||||||| |||||||||| | || |||||  |||||||||||||||||||||| |||||||||||| ||||||| | ||||||| ||||||| | |||||    
T  36361900 aggaagagaaaagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccacctaagggtgtct 36361999  T
Q  119 atgtatcattactc 132  Q
    ||||||||||||||    
T  36362000 atgtatcattactc 36362013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 129
Target Start/End: Complemental strand, 3784120 - 3783998
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| || |||||||||| | || |||||| || ||||||||||||||||||| |||||||||||| ||||||| | ||||||| ||    
T  3784120 aggaagagagaagagga-gagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaagatgtattgcca 3784022  T
Q  106 cctaaagatgtctatgtatcatta 129  Q
    ||||| | ||||||||||||||||    
T  3784021 cctaagggtgtctatgtatcatta 3783998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 29 - 132
Target Start/End: Complemental strand, 21234504 - 21234401
Alignment:
Q  29 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 128  Q
    |||||||||| || |||||| |||| || ||| ||||||||||||||||||||||  ||||||| ||||||||||||||||| ||||||||||||||||     
T  21234504 aagagaaaatgtgcttgtgcggggtacatgtggctacgtgtcaaatttttgtgtgagtgtcaaagggtgtattgtcacctaaggatgtctatgtatcata 21234405  T
Q  129 actc 132  Q
    ||||    
T  21234404 actc 21234401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 38837342 - 38837217
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| || |||||||||| | || |||||| |||||||||||||||||||||| |||||||||| | |||  || ||||||||| ||    
T  38837342 aggaagagagaagagga-gagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtaggtgtacaagggtgtattgcca 38837244  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| | |||||||||||||||||||    
T  38837243 cctaagggtgtctatgtatcattactc 38837217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 131
Target Start/End: Original strand, 32951468 - 32951592
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| || |||||||||| | || |||||| |||||||||||||||||||| | |||||||||||||||| ||| | ||||||||||    
T  32951468 aggaagagagaagagga-gagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtggatgttaaaggatgtattgtca 32951566  T
Q  106 cctaaagatgtctatgtatcattact 131  Q
     ||||   ||||||||||||||||||    
T  32951567 tctaagagtgtctatgtatcattact 32951592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 132
Target Start/End: Complemental strand, 36362139 - 36362026
Alignment:
Q  19 aggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtct 118  Q
    ||||||| |||||||||| | || |||||  |||||||||||||||||||||| |||||||||||| ||||||| | ||||||  ||||||| | |||||    
T  36362139 aggaagagaaaagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattaccacctaagggtgtct 36362040  T
Q  119 atgtatcattactc 132  Q
    ||||||||||||||    
T  36362039 atgtatcattactc 36362026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 7 - 138
Target Start/End: Complemental strand, 3694491 - 3694361
Alignment:
Q  7 ggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcac 106  Q
    |||| ||||||||||| || |||||||||| | || |||||| || ||||| ||||||||||||| |||||||||||| ||| ||| |||||||||||||    
T  3694491 ggaagagagaagagga-gagaaaagagaaagtgtgcttgtgcgggatccacatgactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgtcac 3694393  T
Q  107 ctaaagatgtctatgtatcattactccttttt 138  Q
    |||| | ||| ||| |||||||| || |||||    
T  3694392 ctaagggtgtgtatatatcattattcattttt 3694361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 6 - 136
Target Start/End: Original strand, 40846088 - 40846217
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||| ||||| ||||||||| | | ||||||| |||||||  | ||||| ||| | |||||||||||||||||||  ||||||||| ||    
T  40846088 aggaagagagaagag-aagaagaaagagaaagtgtatttgtgcggggtccatataactacatgttagatttttgtgtggatgtcaaggggtgtattgcca 40846186  T
Q  106 cctaaagatgtctatgtatcattactccttt 136  Q
    ||||| ||||| |||||||||| ||||||||    
T  40846187 cctaaggatgtttatgtatcataactccttt 40846217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 40957832 - 40957707
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| |||||||| || || |||||||||| | || |||| | || ||||||||||||||||||| |||||||||||| | |||||  |||||||| ||    
T  40957832 aggaagagagaagatga-gagaaaagagaaagtgtgcttgtacgggatccacgtgactacgtgtcagatttttgtgtgggtatcaaagagtgtattgcca 40957734  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    |||||   |||||||||||||||||||    
T  40957733 cctaagagtgtctatgtatcattactc 40957707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 46033776 - 46033901
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| || ||||||||||||||| |||||| | || || ||||| |||||||| |||||| ||||| ||| ||| ||||||||| ||    
T  46033776 aggaatagagaagagga-gagaaaagagaaaatatgcttgtgcggagttcatgtgaccacgtgtcagatttttatgtgggtgttaaagggtgtattgcca 46033874  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    |||||  || |||||||||||| ||||    
T  46033875 cctaagaatatctatgtatcataactc 46033901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 145
Target Start/End: Complemental strand, 8238338 - 8238199
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||| ||||| ||||||||| | |  |||||| |||||||  ||||||| ||||| |||||||||||| ||||||| ||||||||| ||    
T  8238338 aggaagagagaagag-aagaagaaagagaaagtgtacttgtgcggggtccatatgactacatgtcagatttttgtgtgggtgtcaaagggtgtattgcca 8238240  T
Q  106 ccta-aagatgtctatgtatcattactcctttttaaaatag 145  Q
    |||| | | ||| |||||||||| |||| |||| |||||||    
T  8238239 cctacagggtgtttatgtatcataactcattttaaaaatag 8238199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 132
Target Start/End: Complemental strand, 26296763 - 26296644
Alignment:
Q  12 agagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaa 111  Q
    ||||||||||| || ||||||||||||  | |||||| |||||||  || | |||| ||| |||||| ||||||||| ||| ||| |||||||||||||     
T  26296763 agagaagagga-gagaaaagagaaaatgcgcttgtgcggggtccatatggccacgtatcagatttttatgtggatgttaaagggtatattgtcacctaag 26296665  T
Q  112 gatgtctatgtatcattactc 132  Q
    |||||||||||||||| ||||    
T  26296664 gatgtctatgtatcataactc 26296644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 139
Target Start/End: Original strand, 35468851 - 35468962
Alignment:
Q  28 aaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcat 127  Q
    ||||||||| | |||||||||||||||||| ||   || | | | |||||| ||||| ||||||||| ||||||| || |||| ||||||||||||||||    
T  35468851 aaagagaaagtgtgtttgtgcagggtccacatggtcacatattagatttttatgtgggtgtcaaatgatgtattgccatctaaggatgtctatgtatcat 35468950  T
Q  128 tactccttttta 139  Q
    ||||| ||||||    
T  35468951 tactctttttta 35468962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 36208298 - 36208173
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| ||  ||||||||||| || |||||||||||||||||||| || |||||  ||||||||||| ||||||    ||||||  ||    
T  36208298 aggaagagagaagagga-gaggaaagagaaaatgtgcttgtgcagggtccacgtgaccacatgtcagctttttgtgtgggtgtcaatgaatgtattacca 36208200  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| | |||||||||||||| ||||    
T  36208199 cctaagggtgtctatgtatcataactc 36208173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 127
Target Start/End: Complemental strand, 35523001 - 35522881
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| |||||||| || || |||||||||| | || |||||| || ||||  || | |||||||| |||||||||||| ||| ||||||||||||| ||    
T  35523001 aggaagagagaagaaga-gagaaaagagaaagtgtgcttgtgcgggatccatatggccacgtgtcagatttttgtgtgggtgttaaatggtgtattgcca 35522903  T
Q  106 cctaaagatgtctatgtatcat 127  Q
    | ||| ||||||||||||||||    
T  35522902 cttaaggatgtctatgtatcat 35522881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 216 - 257
Target Start/End: Complemental strand, 43100239 - 43100198
Alignment:
Q  216 gattaaggtgtatatacggtaatacgcgttcaaaactttctc 257  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  43100239 gattaaggtgtatatacggtaatacgcgttcaaaactttctc 43100198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 43 - 132
Target Start/End: Original strand, 46374813 - 46374902
Alignment:
Q  43 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 132  Q
    |||||| ||||||| ||| | |||||||| |||||||||||| ||| ||| ||||| ||| ||||||| |||||||||||||||| ||||    
T  46374813 ttgtgcggggtccatgtggccacgtgtcagatttttgtgtgggtgttaaagggtgtgttgccacctaaggatgtctatgtatcataactc 46374902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 21 - 132
Target Start/End: Complemental strand, 38044308 - 38044197
Alignment:
Q  21 gaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctat 120  Q
    |||||| ||||||||| | |  |||||| |||||||  || |||| ||||| |||||||||||||||||||  ||||||||| ||||||| | ||| |||    
T  38044308 gaagaagaaagagaaagtgtacttgtgcggggtccatatggctacatgtcagatttttgtgtggatgtcaaggggtgtattgccacctaagggtgtttat 38044209  T
Q  121 gtatcattactc 132  Q
    ||||||| ||||    
T  38044208 gtatcataactc 38044197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 32564401 - 32564526
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||| ||||| ||||||||| | | ||||||| |||||||  |  | || ||||| |||||||||||| ||||||  ||||||||| ||    
T  32564401 aggaagagagaagag-aagaagaaagagaaagtgtatttgtgcggggtccatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgcca 32564499  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    |||||  |||| |||||||||| ||||    
T  32564500 cctaagaatgtttatgtatcataactc 32564526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 41423807 - 41423682
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| ||  |||||||||||||| |||| | || || ||||||| || ||||| ||||||||||   ||||||  ||||||||  ||    
T  41423807 aggaagagagaagagga-gatgaaagagaaaatatgcttgtacgggatctacgtgaccacatgtcagatttttgtgtaagtgtcaagaggtgtattacca 41423709  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
     |||| |||||||||||||||| ||||    
T  41423708 tctaatgatgtctatgtatcataactc 41423682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 132
Target Start/End: Original strand, 39255955 - 39256023
Alignment:
Q  64 acgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 132  Q
    |||||||| |||||||| ||| | |||| |||||||||| ||||||| | |||||||||||||| ||||    
T  39255955 acgtgtcagatttttgtatgggtatcaagtggtgtattgccacctaaggttgtctatgtatcataactc 39256023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 132
Target Start/End: Original strand, 10343597 - 10343663
Alignment:
Q  66 gtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 132  Q
    |||||| |||||||||||| ||||||   |||||||  ||||||| | |||||||||||||||||||    
T  10343597 gtgtcagatttttgtgtgggtgtcaagatgtgtatttccacctaagggtgtctatgtatcattactc 10343663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 91
Target Start/End: Original strand, 16374845 - 16374883
Alignment:
Q  53 tccacgtgactacgtgtcaaatttttgtgtggatgtcaa 91  Q
    |||||||||| |||||||| |||||||||||||||||||    
T  16374845 tccacgtgaccacgtgtcagatttttgtgtggatgtcaa 16374883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 18207304 - 18207180
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| ||  ||||||||| | || |||||  |||| |||||| | |||||| | |||||||| ||| ||||||  ||||||||| ||    
T  18207304 aggaagagagaagagga-gatgaaagagaaagtgtgcttgtgtggggttcacgtgcc-acgtgttagatttttgtatgggtgtcaagaggtgtattgcca 18207207  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| | |||||||||||||| ||||    
T  18207206 cctaaggttgtctatgtatcataactc 18207180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 22343486 - 22343361
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||| ||||| ||||||||| | |  |||||| |||||||  ||   || ||||| |||||||||||| ||||||  ||||||||| ||    
T  22343486 aggaagagagaagag-aagaagaaagagaaagtgtacttgtgcggggtccatatggtcacatgtcagatttttgtgtgggtgtcaaggggtgtattgcca 22343388  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| | ||| |||||||||| ||||    
T  22343387 cctaagggtgtttatgtatcataactc 22343361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 132
Target Start/End: Complemental strand, 31735940 - 31735884
Alignment:
Q  76 tttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 132  Q
    ||||||||| ||| |||  |||||||| ||||||| |||||||||||||||| ||||    
T  31735940 tttgtgtgggtgttaaagagtgtattgccacctaaggatgtctatgtatcataactc 31735884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 71; Significance: 3e-32; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 53982136 - 53982011
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| || |||||||||| | || |||||| |||||||||||||||||||||| |||||||||||| ||||||| ||||||||| ||    
T  53982136 aggaagagagaagagga-gagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgcca 53982038  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| | |||||||||||||||||||    
T  53982037 cctaagggtgtctatgtatcattactc 53982011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 33644325 - 33644200
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| || |||||||||| | || |||||| |||||||||||||||||||||| |||||||||||| ||||||| ||||||||| ||    
T  33644325 aggaagagagaagagga-gagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgcca 33644227  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    || || | |||||||||||||||||||    
T  33644226 cccaagggtgtctatgtatcattactc 33644200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 11347897 - 11348022
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| || |||||||||| | || || ||||||||||| ||| | |||||||| |||||||||||||||||||| | ||||||||||    
T  11347897 aggaagagagaagagga-gagaaaagagaaagtgtgcttatgcagggtccatgtggccacgtgtcagatttttgtgtggatgtcaaaggatgtattgtca 11347995  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| |||||||||||||||| ||||    
T  11347996 cctaaggatgtctatgtatcataactc 11348022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 17470530 - 17470405
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| |||||||| || || |||||||||| | || |||||  |||||||||||||||||||||| |||||||||||| ||| ||| ||||||||| ||    
T  17470530 aggaagagagaagatga-gagaaaagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgcca 17470432  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||||| |||||||||||||||||||    
T  17470431 cctaaaggtgtctatgtatcattactc 17470405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 54868870 - 54868995
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| |||||||| || || |||||||||| | || |||||| |||||||||| ||||||||||| |||||||||||| ||||||| ||||||||| ||    
T  54868870 aggaagagagaagatga-gagaaaagagaaagtgtgattgtgcggggtccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgcca 54868968  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| | |||||||||||||||||||    
T  54868969 cctaagggtgtctatgtatcattactc 54868995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 20 - 132
Target Start/End: Original strand, 27714879 - 27714991
Alignment:
Q  20 ggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtcta 119  Q
    |||||| | |||||||| | || |||||| |||||||| ||||||||||||| |||||||||||| ||||||| ||||||||  ||||||||| ||||||    
T  27714879 ggaagagagaagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaaggtgtcta 27714978  T
Q  120 tgtatcattactc 132  Q
    |||||||||||||    
T  27714979 tgtatcattactc 27714991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 28 - 132
Target Start/End: Original strand, 33118847 - 33118951
Alignment:
Q  28 aaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcat 127  Q
    ||||||||| | ||||| ||  || |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| | ||||||||||||||    
T  33118847 aaagagaaagtgtgtttctgagggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcat 33118946  T
Q  128 tactc 132  Q
     ||||    
T  33118947 aactc 33118951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 9563124 - 9562999
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| || || ||||||| | |||||||||||| ||||||||||||||||||| |||||| | ||||||||||| | ||||||||||    
T  9563124 aggaagagagaagagga-gagaagagagaaagtgtgtttgtgcaggatccacgtgactacgtgtcagatttttatatggatgtcaaaggttgtattgtca 9563026  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
     |||| | ||| |||||||||||||||    
T  9563025 tctaatggtgtttatgtatcattactc 9562999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 132
Target Start/End: Original strand, 11095342 - 11095453
Alignment:
Q  19 aggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtct 118  Q
    ||||||| |||||||||| | ||||| ||| ||||  |||||||||||||||| |||||||||||| ||||||| ||||||||| ||||||| | |||||    
T  11095342 aggaagagaaaagagaaagtgtgtttatgcggggt--acgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtct 11095439  T
Q  119 atgtatcattactc 132  Q
    ||||||||||||||    
T  11095440 atgtatcattactc 11095453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 49607539 - 49607414
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||| ||||||| || |||||||||| | || |||||  || ||||||||||||||||||| |||||||||||| ||||||| ||||||||| ||    
T  49607539 aggaagagaaaagagga-gagaaaagagaaagtgtgcttgtgtgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgcca 49607441  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| | |||||||||||||||||||    
T  49607440 cctaagggtgtctatgtatcattactc 49607414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 127
Target Start/End: Complemental strand, 52629425 - 52629305
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| |||||||| || || |||||||||| | || |||| | |||||||||||||||||||||| |||||||||||| ||||||| ||||||||| ||    
T  52629425 aggaagagagaagatga-gagaaaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgcca 52629327  T
Q  106 cctaaagatgtctatgtatcat 127  Q
    ||||| | ||||||||||||||    
T  52629326 cctaagggtgtctatgtatcat 52629305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 53 - 132
Target Start/End: Original strand, 36707445 - 36707524
Alignment:
Q  53 tccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 132  Q
    ||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||| | | |||||||||||||||||    
T  36707445 tccacgtaactacgtgtcagatttttgtgtggatgtcaaagggtgtattgtcacctaagggtatctatgtatcattactc 36707524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 8076518 - 8076393
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| ||  ||||||||| | || |||||| |||||||||||||||||||| | |||||||||||| ||||||| |||||| || ||    
T  8076518 aggaagagagaagagga-gaggaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtactgcca 8076420  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| | ||| |||||||||||||||    
T  8076419 cctaagggtgtttatgtatcattactc 8076393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 24699929 - 24700054
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| ||  ||||||||| | ||||||| ||||||||||||| | ||||| || |||||| ||||| ||||||| ||||||||| ||    
T  24699929 aggaagagagaagagga-gaggaaagagaaagtgtgtttgtacagggtccacgtggccacgtgccagatttttatgtgggtgtcaaaaggtgtattgcca 24700027  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
     |||| |||||||||||||||||||||    
T  24700028 actaaggatgtctatgtatcattactc 24700054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 6 - 131
Target Start/End: Complemental strand, 31456814 - 31456690
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||| ||||||| || |||||||||| | || |||||| |||||||| ||||||||||||| |||||||||||| ||||||| ||||||||| |     
T  31456814 aggaagagaaaagagga-gagaaaagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccg 31456716  T
Q  106 cctaaagatgtctatgtatcattact 131  Q
    ||||  | ||||||||||||||||||    
T  31456715 cctatgggtgtctatgtatcattact 31456690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 26141515 - 26141632
Alignment:
Q  14 agaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaaga 113  Q
    ||||||||| || |||||||||| | || |||||  ||||||| ||||| |||||||| |||||||||||| ||| ||| ||||||||| ||||||| ||    
T  26141515 agaagagga-gagaaaagagaaagtgtgcttgtgtggggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccacctaagga 26141613  T
Q  114 tgtctatgtatcattactc 132  Q
    |||||||||||||| ||||    
T  26141614 tgtctatgtatcataactc 26141632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 35536751 - 35536626
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||| ||||  |||||| || | || ||||| | ||||||| |||| |||||||| |||||| ||||| ||||||||||||||||| ||    
T  35536751 aggaagagagaagag-aagatgaaagaggaagtgtgcttgtgtaaggtccacatgaccacgtgtcacatttttatgtgggtgtcaaatggtgtattgcca 35536653  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    | ||| |||||||||||||||||||||    
T  35536652 cataaggatgtctatgtatcattactc 35536626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 41189747 - 41189864
Alignment:
Q  14 agaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaaga 113  Q
    ||||||||| || |||||||||| | || |||||| ||||||| ||| | ||||||||||||||| ||||| ||||||||| ||||||| ||||||| ||    
T  41189747 agaagagga-gagaaaagagaaagtgtgcttgtgcggggtccatgtggccacgtgtcaaatttttatgtgggtgtcaaatgatgtattgccacctaagga 41189845  T
Q  114 tgtctatgtatcattactc 132  Q
    ||| |||||||||| ||||    
T  41189846 tgtatatgtatcataactc 41189864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 127
Target Start/End: Complemental strand, 26754820 - 26754700
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| ||  ||||||||||| || |||||| ||||||| ||||| || ||||| ||||||||||||||||| || ||||||||| ||    
T  26754820 aggaagagagaagagga-gaggaaagagaaaatgtgcttgtgcggggtccatgtgaccacatgtcagatttttgtgtggatgtccaagggtgtattgcca 26754722  T
Q  106 cctaaagatgtctatgtatcat 127  Q
    ||||| | |||||||| |||||    
T  26754721 cctaagggtgtctatgaatcat 26754700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 128
Target Start/End: Original strand, 30801729 - 30801829
Alignment:
Q  28 aaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcat 127  Q
    ||||||||||| || |||||  |||||||  ||||||| ||||| |||||||||||| | ||||| |||||||| |||||||| | ||||||||||||||    
T  30801729 aaagagaaaatgtgcttgtgtggggtccatatgactacatgtcatatttttgtgtgggtatcaaagggtgtattatcacctaagggtgtctatgtatcat 30801828  T
Q  128 t 128  Q
    |    
T  30801829 t 30801829  T

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Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 125
Target Start/End: Complemental strand, 35093650 - 35093592
Alignment:
Q  67 tgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatc 125  Q
    ||||| ||||||| |||||||||||||| ||||||||||||||||| ||||||||||||    
T  35093650 tgtcagatttttgcgtggatgtcaaatgttgtattgtcacctaaagttgtctatgtatc 35093592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 51419335 - 51419460
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| |||||| |||| || |||||||||| | || |||||| ||||| | ||| | |||||||| |||||||||||| ||| ||| | ||||||||||    
T  51419335 aggaagagagaatagga-gagaaaagagaaagtgtgcttgtgcggggtctatgtggccacgtgtcagatttttgtgtgggtgttaaaggatgtattgtca 51419433  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
     |||| |||||||||||||||| ||||    
T  51419434 tctaaggatgtctatgtatcataactc 51419460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 43 - 128
Target Start/End: Original strand, 48587102 - 48587187
Alignment:
Q  43 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 128  Q
    |||||| || ||||||||||||||||||| |||||| ||| | ||||||| ||||||||| ||||||| | | |||||||||||||    
T  48587102 ttgtgcgggatccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccacctaagggtatctatgtatcatt 48587187  T

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Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 67 - 134
Target Start/End: Original strand, 14623874 - 14623941
Alignment:
Q  67 tgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactcct 134  Q
    ||||| |||||| ||||| ||||||  ||||||||| ||||||| |||||||||||||||||||||||    
T  14623874 tgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtctatgtatcattactcct 14623941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 8956887 - 8956762
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||| ||||  |||||| || | || ||||| | ||||||| |||  |||||||| |||||| ||||| ||||||| | ||||||| ||    
T  8956887 aggaagagagaagag-aagatgaaagaggaagtgtgcttgtgtaaggtccacatgaacacgtgtcacatttttatgtgggtgtcaaaggatgtattgcca 8956789  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    | ||| |||||||||||||||||||||    
T  8956788 cataaggatgtctatgtatcattactc 8956762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 47531990 - 47531865
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| |||||| |||| || |||||||||| | || |||||| |||| ||  || | |||||||| ||| |||||||||||| ||| ||||||||| ||    
T  47531990 aggaagagagaatagga-gagaaaagagaaagtgtgcttgtgcggggttcatatggccacgtgtcagattcttgtgtggatgttaaaaggtgtattgcca 47531892  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
     |||| |||||||||||||||| ||||    
T  47531891 tctaaggatgtctatgtatcataactc 47531865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 20764890 - 20765015
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| |||||||| || || |||||||||| | || |||| | ||||||| ||| | |||||||| |||||||||||| ||| |||  |||||||  ||    
T  20764890 aggaagagagaagatga-gagaaaagagaaagtgtgcttgtacggggtccatgtggccacgtgtcagatttttgtgtgggtgttaaagagtgtattacca 20764988  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| ||||||||||| |||| ||||    
T  20764989 cctaaggatgtctatgtctcataactc 20765015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 48375681 - 48375806
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| ||  ||||||||||| || |||||| ||||||| ||||| ||  |||| |||||||| ||||| |  |  ||||||||||||    
T  48375681 aggaagagagaagagga-gaggaaagagaaaatgtgcttgtgcggggtccatgtgaccacacgtcagatttttgtatggattttcaggggtgtattgtca 48375779  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    ||||| | |||||||| ||||| ||||    
T  48375780 cctaagggtgtctatgaatcataactc 48375806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 132
Target Start/End: Original strand, 35965806 - 35965874
Alignment:
Q  64 acgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 132  Q
    |||||||| |||||| ||||| ||||||| | |||||| |||| ||| ||||| |||||||||||||||    
T  35965806 acgtgtcagatttttatgtgggtgtcaaaggatgtattatcacttaaggatgtatatgtatcattactc 35965874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 141
Target Start/End: Complemental strand, 41080832 - 41080700
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| ||  ||||||||||| || |||||  |||||||| |||| || | ||| ||||||| |||| ||||||| ||||| |||  |    
T  41080832 aggaagagagaagagga-gatgaaagagaaaatgtgcttgtgt-gggtccacatgaccacatatcagatttttgcgtgggtgtcaaagggtgttttgcta 41080735  T
Q  106 cctaaagatgtctatgtatcattactcctttttaaa 141  Q
    | ||| ||||||||||||||||||||| || |||||    
T  41080734 c-taaggatgtctatgtatcattactcgttgttaaa 41080700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 904 - 1029
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| ||  ||||||||| | || |||||| || | |||||||||||||||||  ||||||||||||||| ||| ||||||||| ||    
T  904 aggaagagagaagagga-gaggaaagagaaagtgtgcttgtgcgggattcacgtgactacgtgtcagttttttgtgtggatgttaaagggtgtattgcca 1002  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    |||||||||||||||||||||||||||    
T  1003 cctaaagatgtctatgtatcattactc 1029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 904 - 1029
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| ||  ||||||||| | || |||||| || | |||||||||||||||||  ||||||||||||||| ||| ||||||||| ||    
T  904 aggaagagagaagagga-gaggaaagagaaagtgtgcttgtgcgggattcacgtgactacgtgtcagttttttgtgtggatgttaaagggtgtattgcca 1002  T
Q  106 cctaaagatgtctatgtatcattactc 132  Q
    |||||||||||||||||||||||||||    
T  1003 cctaaagatgtctatgtatcattactc 1029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 6 - 142
Target Start/End: Original strand, 10084 - 10218
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||||| || |||||||||| | || |||| |  ||||||||||||||||||||| |||||| ||||||||||||| | ||||||| ||    
T  10084 aggaagagagaagagga-gagaaaagagaaagtgtgcttgtacgcggtccacgtgactacgtgtcagatttttatgtggatgtcaaaggatgtattgcca 10182  T
Q  106 cctaaagatgtctatgtatcattactcctttttaaaa 142  Q
    ||||||| |||||||||||||| ||| ||||||||||    
T  10183 cctaaaggtgtctatgtatcataact-ctttttaaaa 10218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 28 - 132
Target Start/End: Original strand, 8859 - 8963
Alignment:
Q  28 aaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcat 127  Q
    ||||||||||| |  |||||  ||||||||||||||| ||||||||||||||||| |||||||||| |||||||||||| ||| ||||||||| ||||||    
T  8859 aaagagaaaatgtacttgtgtggggtccacgtgactatgtgtcaaatttttgtgtagatgtcaaatagtgtattgtcacttaaggatgtctatatatcat 8958  T
Q  128 tactc 132  Q
     ||||    
T  8959 aactc 8963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 6 - 133
Target Start/End: Complemental strand, 4154 - 4028
Alignment:
Q  6 aggaacagagaagaggaagaaaaaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtca 105  Q
    ||||| ||||||||| |||| |||||||||| | || || ||| || ||||||| ||||||||||| |||||||||||| ||| ||| ||||||||| ||    
T  4154 aggaagagagaagag-aagagaaaagagaaagtgtgcttatgcgggatccacgtaactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgcca 4056  T
Q  106 cctaaagatgtctatgtatcattactcc 133  Q
     |||||| ||||||||||||||||||||    
T  4055 tctaaaggtgtctatgtatcattactcc 4028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 17158 - 17097
Alignment:
Q  28 aaagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtc 89  Q
    ||||||||||| || |||||| ||||||| ||||| || ||||| |||||||||||||||||    
T  17158 aaagagaaaatgtgcttgtgcggggtccatgtgaccacatgtcagatttttgtgtggatgtc 17097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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