View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15311_low_37 (Length: 274)

Name: NF15311_low_37
Description: NF15311
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15311_low_37
NF15311_low_37
[»] chr7 (39 HSPs)
chr7 (29-255)||(27776139-27776351)
chr7 (107-222)||(43590907-43591022)
chr7 (107-222)||(41487362-41487474)
chr7 (107-222)||(18363696-18363810)
chr7 (108-222)||(48771938-48772052)
chr7 (107-222)||(26459371-26459486)
chr7 (107-222)||(30579335-30579450)
chr7 (108-224)||(19553452-19553567)
chr7 (107-222)||(11720921-11721036)
chr7 (107-222)||(17040973-17041088)
chr7 (108-215)||(37085511-37085618)
chr7 (107-222)||(39631844-39631959)
chr7 (152-222)||(15137553-15137623)
chr7 (154-220)||(21854550-21854616)
chr7 (144-222)||(24513797-24513875)
chr7 (156-222)||(25021345-25021411)
chr7 (108-222)||(31835192-31835306)
chr7 (141-222)||(22760863-22760944)
chr7 (107-222)||(2446308-2446423)
chr7 (107-222)||(25590611-25590726)
chr7 (156-222)||(23735237-23735303)
chr7 (151-217)||(41519269-41519335)
chr7 (108-222)||(43215184-43215298)
chr7 (130-224)||(48125159-48125252)
chr7 (107-219)||(15905635-15905746)
chr7 (166-222)||(23301622-23301678)
chr7 (110-222)||(38374563-38374675)
chr7 (151-222)||(7801180-7801251)
chr7 (151-222)||(20335836-20335907)
chr7 (108-219)||(37162312-37162423)
chr7 (111-218)||(42711962-42712069)
chr7 (151-222)||(45709713-45709784)
chr7 (152-222)||(5579240-5579310)
chr7 (107-177)||(21558173-21558243)
chr7 (153-222)||(42836008-42836077)
chr7 (157-221)||(22927477-22927541)
chr7 (152-220)||(29385749-29385817)
chr7 (154-222)||(37233580-37233648)
chr7 (156-220)||(44628193-44628257)
[»] chr1 (26 HSPs)
chr1 (108-222)||(52116743-52116857)
chr1 (107-222)||(9165156-9165271)
chr1 (108-220)||(33700735-33700847)
chr1 (107-222)||(2799862-2799977)
chr1 (107-222)||(16893394-16893509)
chr1 (107-222)||(46146228-46146343)
chr1 (141-222)||(19528322-19528403)
chr1 (151-222)||(6122794-6122865)
chr1 (107-222)||(8177143-8177258)
chr1 (158-223)||(31794276-31794341)
chr1 (110-222)||(952511-952623)
chr1 (147-222)||(40257399-40257474)
chr1 (155-222)||(41508831-41508898)
chr1 (111-222)||(51814494-51814605)
chr1 (108-222)||(36371470-36371584)
chr1 (151-219)||(15786325-15786393)
chr1 (151-222)||(12259260-12259331)
chr1 (151-222)||(51703779-51703850)
chr1 (130-222)||(21694446-21694535)
chr1 (108-222)||(44961765-44961879)
chr1 (108-169)||(15065018-15065079)
chr1 (141-222)||(15581137-15581217)
chr1 (107-223)||(2219971-2220087)
chr1 (110-222)||(8904414-8904526)
chr1 (147-191)||(10150870-10150914)
chr1 (142-222)||(16169974-16170054)
[»] chr3 (29 HSPs)
chr3 (107-222)||(14339610-14339725)
chr3 (107-222)||(30311306-30311421)
chr3 (108-222)||(15048023-15048137)
chr3 (151-223)||(4222140-4222212)
chr3 (107-222)||(44743816-44743925)
chr3 (107-222)||(11642170-11642285)
chr3 (111-222)||(31520570-31520681)
chr3 (152-222)||(27093367-27093437)
chr3 (107-221)||(47454578-47454692)
chr3 (107-215)||(2667869-2667977)
chr3 (151-223)||(27923048-27923120)
chr3 (151-222)||(36720381-36720452)
chr3 (108-223)||(37788428-37788542)
chr3 (107-222)||(46518628-46518743)
chr3 (107-222)||(51903839-51903954)
chr3 (108-214)||(11612307-11612413)
chr3 (151-224)||(2597225-2597298)
chr3 (107-215)||(4844472-4844580)
chr3 (107-215)||(4870168-4870276)
chr3 (130-222)||(5499391-5499483)
chr3 (151-222)||(3054994-3055065)
chr3 (151-222)||(8051214-8051285)
chr3 (151-222)||(10499114-10499185)
chr3 (108-222)||(28703366-28703480)
chr3 (165-222)||(31788989-31789046)
chr3 (114-219)||(53412948-53413053)
chr3 (146-222)||(8170672-8170748)
chr3 (107-222)||(10445100-10445216)
chr3 (130-222)||(30232330-30232422)
[»] chr8 (26 HSPs)
chr8 (107-224)||(18540296-18540413)
chr8 (108-225)||(968359-968476)
chr8 (111-220)||(2203494-2203603)
chr8 (110-222)||(35641865-35641977)
chr8 (107-222)||(16852340-16852455)
chr8 (147-222)||(23361650-23361725)
chr8 (147-222)||(30483885-30483960)
chr8 (151-222)||(11819776-11819847)
chr8 (151-222)||(27750730-27750801)
chr8 (107-222)||(28783060-28783175)
chr8 (152-222)||(44780120-44780190)
chr8 (142-222)||(19703483-19703563)
chr8 (150-222)||(26688865-26688937)
chr8 (107-202)||(6536540-6536635)
chr8 (111-221)||(29858014-29858124)
chr8 (152-224)||(40591730-40591799)
chr8 (151-220)||(3624582-3624651)
chr8 (149-222)||(4830487-4830560)
chr8 (155-223)||(6436564-6436632)
chr8 (166-222)||(29431011-29431067)
chr8 (107-222)||(8484999-8485114)
chr8 (132-222)||(6530807-6530896)
chr8 (151-193)||(34628671-34628713)
chr8 (154-222)||(20994465-20994534)
chr8 (142-222)||(8059632-8059712)
chr8 (130-222)||(35287716-35287808)
[»] chr2 (23 HSPs)
chr2 (107-222)||(23052484-23052599)
chr2 (107-222)||(37480075-37480190)
chr2 (111-222)||(39714992-39715103)
chr2 (107-222)||(7798997-7799111)
chr2 (151-223)||(42327400-42327472)
chr2 (107-222)||(29503271-29503385)
chr2 (152-222)||(11062360-11062430)
chr2 (108-222)||(19016031-19016145)
chr2 (108-223)||(42922413-42922529)
chr2 (155-222)||(1435064-1435131)
chr2 (151-222)||(21195681-21195752)
chr2 (107-222)||(42602554-42602669)
chr2 (108-222)||(14500277-14500391)
chr2 (152-221)||(16918584-16918653)
chr2 (107-224)||(26482091-26482207)
chr2 (163-222)||(16381671-16381730)
chr2 (115-222)||(29197345-29197452)
chr2 (107-222)||(34041549-34041664)
chr2 (149-223)||(18259729-18259803)
chr2 (165-222)||(1729816-1729873)
chr2 (107-224)||(2750587-2750704)
chr2 (108-220)||(12086091-12086203)
chr2 (141-177)||(31681094-31681130)
[»] chr6 (16 HSPs)
chr6 (107-225)||(21418467-21418585)
chr6 (107-222)||(12188264-12188379)
chr6 (108-222)||(15951264-15951378)
chr6 (130-222)||(11423566-11423658)
chr6 (110-222)||(30127400-30127512)
chr6 (151-222)||(33549104-33549175)
chr6 (151-218)||(10338179-10338246)
chr6 (151-202)||(20213061-20213112)
chr6 (151-202)||(22107084-22107135)
chr6 (111-177)||(6519135-6519201)
chr6 (156-218)||(6776617-6776679)
chr6 (108-222)||(12234469-12234583)
chr6 (152-222)||(31622997-31623067)
chr6 (172-221)||(6758448-6758497)
chr6 (142-222)||(22995107-22995187)
chr6 (142-222)||(23793213-23793293)
[»] chr5 (20 HSPs)
chr5 (107-222)||(21549099-21549213)
chr5 (130-224)||(16457808-16457902)
chr5 (151-222)||(25627057-25627128)
chr5 (119-222)||(26078024-26078127)
chr5 (147-222)||(29692387-29692462)
chr5 (151-223)||(21589287-21589359)
chr5 (130-222)||(30883182-30883274)
chr5 (107-222)||(19043458-19043572)
chr5 (107-223)||(16773806-16773922)
chr5 (107-222)||(6844729-6844844)
chr5 (107-222)||(8278236-8278351)
chr5 (107-222)||(17028225-17028340)
chr5 (107-222)||(22020823-22020938)
chr5 (151-222)||(22737082-22737153)
chr5 (107-222)||(29075781-29075896)
chr5 (107-222)||(30109270-30109384)
chr5 (144-218)||(16436622-16436695)
chr5 (152-222)||(40461619-40461689)
chr5 (151-191)||(12877724-12877764)
chr5 (110-222)||(34984806-34984918)
[»] chr4 (29 HSPs)
chr4 (107-219)||(7292759-7292871)
chr4 (107-222)||(4249177-4249292)
chr4 (111-222)||(19238542-19238653)
chr4 (107-222)||(37109312-37109427)
chr4 (111-222)||(39509070-39509181)
chr4 (108-222)||(19680750-19680864)
chr4 (151-222)||(31826609-31826680)
chr4 (108-222)||(51250484-51250598)
chr4 (151-224)||(8030209-8030282)
chr4 (151-215)||(49576899-49576963)
chr4 (107-222)||(37720175-37720290)
chr4 (111-222)||(55427165-55427276)
chr4 (111-192)||(14451711-14451792)
chr4 (107-191)||(30938180-30938264)
chr4 (107-222)||(37274420-37274536)
chr4 (107-207)||(38869783-38869883)
chr4 (152-220)||(40283992-40284060)
chr4 (108-222)||(2184994-2185109)
chr4 (107-222)||(7949415-7949530)
chr4 (151-222)||(9241030-9241101)
chr4 (155-222)||(31759667-31759734)
chr4 (107-193)||(23377985-23378071)
chr4 (108-218)||(37980110-37980219)
chr4 (108-222)||(46295097-46295211)
chr4 (128-222)||(51948480-51948574)
chr4 (173-222)||(27965537-27965586)
chr4 (129-222)||(47044717-47044809)
chr4 (151-219)||(41346968-41347036)
chr4 (147-183)||(43728434-43728470)
[»] scaffold0002 (1 HSPs)
scaffold0002 (108-219)||(94935-95044)
[»] scaffold0258 (1 HSPs)
scaffold0258 (107-222)||(15284-15399)
[»] scaffold1367 (1 HSPs)
scaffold1367 (151-216)||(845-910)
[»] scaffold0122 (1 HSPs)
scaffold0122 (151-215)||(6924-6988)
[»] scaffold0070 (1 HSPs)
scaffold0070 (107-223)||(42482-42597)
[»] scaffold0172 (1 HSPs)
scaffold0172 (108-222)||(15739-15853)
[»] scaffold0299 (1 HSPs)
scaffold0299 (151-216)||(11534-11599)
[»] scaffold0291 (1 HSPs)
scaffold0291 (139-223)||(2463-2547)
[»] scaffold0417 (1 HSPs)
scaffold0417 (111-222)||(10219-10330)
[»] scaffold0194 (1 HSPs)
scaffold0194 (151-218)||(13051-13118)
[»] scaffold0118 (1 HSPs)
scaffold0118 (147-222)||(41634-41709)
[»] scaffold0013 (1 HSPs)
scaffold0013 (150-222)||(91125-91197)


Alignment Details
Target: chr7 (Bit Score: 119; Significance: 7e-61; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 29 - 255
Target Start/End: Complemental strand, 27776351 - 27776139
Alignment:
Q  29 atttcactatctatattttctttaattgcctcttaatgataattttacagtaactcaccttgtttaatatannnnnnngaagaagctaaattaacccgct 128  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||       ||| ||||||||||            
T  27776351 atttcactatctttattttctttaattgcctcttaatgataattttacaataactcaccttgtttaatatatttttttgaaaaagctaaatt-------- 27776260  T
Q  129 taaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggttcacctt 228  Q
          ||||||||||||||||||||||||||||| |||||| |||||| || ||| |||||||||||||||||||||||||||||||||||||||||||    
T  27776259 ------ggcgctggggaaaattgaacctgagacttcgaggaggagcacactctcaagtcccaagcgtataccaccaggccaacccaagtgggttcacctt 27776166  T
Q  229 gtttaatatattagtgatggtgcagag 255  Q
    |||| |||||||||||||| |||||||    
T  27776165 gtttgatatattagtgatgatgcagag 27776139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 107 - 222
Target Start/End: Complemental strand, 43591022 - 43590907
Alignment:
Q  107 gaagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccagg 206  Q
    ||||||||||||||| ||| | | ||||||| || |||| ||| ||||||||||| |||||||| |||||| |||||| ||||||||  |||||||||||    
T  43591022 gaagaagctaaattagcccaccttaattggcactagggagaatcgaacctgagacattgaggaggagcacactcccaagtcccaagccaataccaccagg 43590923  T
Q  207 ccaacccaagtgggtt 222  Q
    ||||||||| ||||||    
T  43590922 ccaacccaactgggtt 43590907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 107 - 222
Target Start/End: Complemental strand, 41487474 - 41487362
Alignment:
Q  107 gaagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccagg 206  Q
    ||||||||||||||| ||| | ||||||||| | ||| | ||| ||||||||||| ||||||||||   || |||||| ||||||||  |||||||||||    
T  41487474 gaagaagctaaattagcccacctaaattggcaccgggaagaatcgaacctgagaccttgaggagaa---cactcccaagtcccaagccaataccaccagg 41487378  T
Q  207 ccaacccaagtgggtt 222  Q
    ||||||||||||||||    
T  41487377 ccaacccaagtgggtt 41487362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 107 - 222
Target Start/End: Complemental strand, 18363810 - 18363696
Alignment:
Q  107 gaagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccagg 206  Q
    |||||||||||| |||||| || |||||||  || | || |||  |||||||||| |||||||| |||||| ||||||||| ||||| |||||||| |||    
T  18363810 gaagaagctaaactaaccc-ctcaaattggtactagagagaatcaaacctgagaccttgaggaggagcacactcccaaatctcaagcctataccactagg 18363712  T
Q  207 ccaacccaagtgggtt 222  Q
    ||||||||||||||||    
T  18363711 ccaacccaagtgggtt 18363696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 108 - 222
Target Start/End: Complemental strand, 48772052 - 48771938
Alignment:
Q  108 aagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggc 207  Q
    |||||||||||||| ||| | ||||||||  || |||| ||| ||||||||||| |  ||||| |||||| ||||| |||||||||  ||||||||| ||    
T  48772052 aagaagctaaattagcccacctaaattggtacttgggataatcgaacctgagacctcaaggaggagcacactcccagatcccaagccaataccaccaagc 48771953  T
Q  208 caacccaagtgggtt 222  Q
    |||||||||||||||    
T  48771952 caacccaagtgggtt 48771938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 107 - 222
Target Start/End: Original strand, 26459371 - 26459486
Alignment:
Q  107 gaagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccagg 206  Q
    |||||||||||| ||||||  | |||||||| |  | || ||| ||||||||||| |||||||| |||||| |||||  ||||||||  ||||||| |||    
T  26459371 gaagaagctaaactaaccccttcaaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactagg 26459470  T
Q  207 ccaacccaagtgggtt 222  Q
    ||||||||||||||||    
T  26459471 ccaacccaagtgggtt 26459486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 107 - 222
Target Start/End: Complemental strand, 30579450 - 30579335
Alignment:
Q  107 gaagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccagg 206  Q
    ||||||||||||||| ||| | ||||||||| |  | |||||| ||||||||||| ||||||||  | ||| |||||  || |||||  |||||||||||    
T  30579450 gaagaagctaaattagcccacctaaattggcaccagagaaaatcgaacctgagaccttgaggaggtggacactcccaggtctcaagccaataccaccagg 30579351  T
Q  207 ccaacccaagtgggtt 222  Q
    ||||||||||||||||    
T  30579350 ccaacccaagtgggtt 30579335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 108 - 224
Target Start/End: Complemental strand, 19553567 - 19553452
Alignment:
Q  108 aagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggc 207  Q
    ||||||||||| || ||| | ||||||||  | ||||| |||||||||| |||| |||||||| |||||| |||||  | ||||||  ||||||||||||    
T  19553567 aagaagctaaagtagcccacctaaattggaaccggggagaattgaacctaagaccttgaggaggagcacactcccaggt-ccaagccaataccaccaggc 19553469  T
Q  208 caacccaagtgggttca 224  Q
    ||||||||| |||||||    
T  19553468 caacccaagcgggttca 19553452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 107 - 222
Target Start/End: Original strand, 11720921 - 11721036
Alignment:
Q  107 gaagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccagg 206  Q
    ||||||||||||||| ||| |  |||||||| ||||||| ||| ||| |||| || || ||||| |||||| |||||  ||||||||  |||||||||||    
T  11720921 gaagaagctaaattagcccacccaaattggcactggggagaatcgaatctgataccttaaggaggagcacattcccaggtcccaagccaataccaccagg 11721020  T
Q  207 ccaacccaagtgggtt 222  Q
    |||||| |||| ||||    
T  11721021 ccaaccgaagttggtt 11721036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 107 - 222
Target Start/End: Original strand, 17040973 - 17041088
Alignment:
Q  107 gaagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccagg 206  Q
    |||||||||||||| |||| |  |||||||| || | || ||| ||||||||||| |||||||| |||||| | ||| |||||||||  || |||| ||     
T  17040973 gaagaagctaaattgacccacccaaattggcacttgagagaatcgaacctgagaccttgaggaggagcacacttccagatcccaagccaatgccactaga 17041072  T
Q  207 ccaacccaagtgggtt 222  Q
    ||||||||||||||||    
T  17041073 ccaacccaagtgggtt 17041088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 215
Target Start/End: Original strand, 37085511 - 37085618
Alignment:
Q  108 aagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggc 207  Q
    |||||| ||||||| ||| ||||||||||   |||||| ||| |||||||| || | |||||  |||||| |||||||||||||||  ||||||||| ||    
T  37085511 aagaagttaaattagcccacttaaattggtattggggagaatcgaacctgaaacctcgaggatgagcacactcccaaatcccaagccaataccaccatgc 37085610  T
Q  208 caacccaa 215  Q
    ||||||||    
T  37085611 caacccaa 37085618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 107 - 222
Target Start/End: Complemental strand, 39631959 - 39631844
Alignment:
Q  107 gaagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccagg 206  Q
    |||||||||||| |||||| || |||||||| |  | || ||| ||||||||||| |||||||| |||  | |||||  ||||||||  ||||||| |||    
T  39631959 gaagaagctaaactaaccccctcaaattggcacaagagagaatcgaacctgagaccttgaggaggagcttactcccaggtcccaagccaataccactagg 39631860  T
Q  207 ccaacccaagtgggtt 222  Q
    ||||||||||||||||    
T  39631859 ccaacccaagtgggtt 39631844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 222
Target Start/End: Complemental strand, 15137623 - 15137553
Alignment:
Q  152 aacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggtt 222  Q
    |||||||||| |||||||| |||||| ||| ||||||||||    ||||||||||||||||||||||||||    
T  15137623 aacctgagaccttgaggaggagcacactcctaaatcccaagtcagtaccaccaggccaacccaagtgggtt 15137553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 154 - 220
Target Start/End: Complemental strand, 21854616 - 21854550
Alignment:
Q  154 cctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtggg 220  Q
    ||||||||||||||||| |||||| ||||| ||||| |||  |||||| ||||||||||||||||||    
T  21854616 cctgagactttgaggaggagcacactcccagatccctagccaataccatcaggccaacccaagtggg 21854550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 144 - 222
Target Start/End: Complemental strand, 24513875 - 24513797
Alignment:
Q  144 gaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggtt 222  Q
    |||||| ||||||||||| |  |||||||| ||| ||||||||| |||||  ||||||| |||||||||||||||||||    
T  24513875 gaaaatcgaacctgagacctcaaggagaagtacactcccaaatctcaagccaataccactaggccaacccaagtgggtt 24513797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 156 - 222
Target Start/End: Original strand, 25021345 - 25021411
Alignment:
Q  156 tgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggtt 222  Q
    ||||||||||||||| |||||| |||||  ||||||||  ||||||| |||||||||||||||||||    
T  25021345 tgagactttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 25021411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 108 - 222
Target Start/End: Complemental strand, 31835306 - 31835192
Alignment:
Q  108 aagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggc 207  Q
    ||||||||||| || |||||  |||||||| |  |||| ||| ||||||||||| |||||||| |||||| ||| |   |||||||  | ||||||||||    
T  31835306 aagaagctaaactagcccgccaaaattggcaccagggataatcgaacctgagaccttgaggaggagcacactccaagcacccaagccaacaccaccaggc 31835207  T
Q  208 caacccaagtgggtt 222  Q
    |||||||||||||||    
T  31835206 caacccaagtgggtt 31835192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 222
Target Start/End: Complemental strand, 22760944 - 22760863
Alignment:
Q  141 ggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggtt 222  Q
    ||||| ||| ||||||||||| |||||||| |||||| |||||  |||||||   |||||||||| ||||||||||||||||    
T  22760944 ggggagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagtcaataccaccagaccaacccaagtgggtt 22760863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 222
Target Start/End: Complemental strand, 2446423 - 2446308
Alignment:
Q  107 gaagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccagg 206  Q
    ||||||||||||||| ||| | ||||| ||| | || || ||| |||| |||||  | |||||| |||||| |||||| ||||||||  |||||| |||     
T  2446423 gaagaagctaaattagcccacctaaatcggcaccggagagaatcgaacttgagatctcgaggaggagcacactcccaagtcccaagccaataccatcaga 2446324  T
Q  207 ccaacccaagtgggtt 222  Q
    ||||||||||||||||    
T  2446323 ccaacccaagtgggtt 2446308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 222
Target Start/End: Complemental strand, 25590726 - 25590611
Alignment:
Q  107 gaagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccagg 206  Q
    ||||||||||||||| ||| || |||||| | | |  |||||| ||||| ||||| | |||||| |||||| ||||| ||| |||||  |||||| ||||    
T  25590726 gaagaagctaaattagcccactcaaattgacaccgaagaaaatcgaacccgagacctcgaggaggagcacactcccagatctcaagccaataccaacagg 25590627  T
Q  207 ccaacccaagtgggtt 222  Q
     |||||||||||||||    
T  25590626 tcaacccaagtgggtt 25590611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 222
Target Start/End: Original strand, 23735237 - 23735303
Alignment:
Q  156 tgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggtt 222  Q
    ||||||||||||||| ||||||||||||||| | ||||  ||||||| ||  |||||||||||||||    
T  23735237 tgagactttgaggaggagcacaatcccaaattctaagccaataccactagatcaacccaagtgggtt 23735303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 217
Target Start/End: Original strand, 41519269 - 41519335
Alignment:
Q  151 gaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagt 217  Q
    ||||||||||| |||||||| |||||| ||| ||||||||||   ||||||| ||||||||||||||    
T  41519269 gaacctgagaccttgaggaggagcacactcctaaatcccaagtcaataccactaggccaacccaagt 41519335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 222
Target Start/End: Complemental strand, 43215298 - 43215184
Alignment:
Q  108 aagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggc 207  Q
    ||||||||||| |||||| || ||||||||    | || ||| ||||||||||| |||||||| |||||| ||| |  ||||||||  ||||||| || |    
T  43215298 aagaagctaaactaaccccctcaaattggcataagagagaatcgaacctgagaccttgaggaggagcacactccgaggtcccaagccaataccactagac 43215199  T
Q  208 caacccaagtgggtt 222  Q
    |||||||||||||||    
T  43215198 caacccaagtgggtt 43215184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 224
Target Start/End: Original strand, 48125159 - 48125252
Alignment:
Q  130 aaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggttca 224  Q
    |||||||| | ||||||||||||||||||||| ||  |||| |||||| ||| |  ||||||||  | |||||||| ||||||||||||||||||    
T  48125159 aaattggcaccggggaaaattgaacctgagacctt-cggaggagcacactccaaggtcccaagccaacaccaccagaccaacccaagtgggttca 48125252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 219
Target Start/End: Original strand, 15905635 - 15905746
Alignment:
Q  107 gaagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccagg 206  Q
    ||||||||||||||||||| |  |||||| |  | |||| ||| ||||||||||| |  ||||| |||||| |||||  ||||||||  ||||| |||||    
T  15905635 gaagaagctaaattaacccacccaaattgacattagggagaatcgaacctgagaccta-aggaggagcacactcccaggtcccaagccaataccgccagg 15905733  T
Q  207 ccaacccaagtgg 219  Q
    |||||||||||||    
T  15905734 ccaacccaagtgg 15905746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 222
Target Start/End: Original strand, 23301622 - 23301678
Alignment:
Q  166 aggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggtt 222  Q
    ||||| |||||| |||||| |||||||   |||||||||||||||||||||||||||    
T  23301622 aggaggagcacactcccaagtcccaagtcaataccaccaggccaacccaagtgggtt 23301678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 222
Target Start/End: Original strand, 38374563 - 38374675
Alignment:
Q  110 gaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggcca 209  Q
    ||||||||| || ||| | ||||||||| | ||||| ||| |||||| |||| |||||||| |||||| ||  |  ||||||||  | ||||||| ||||    
T  38374563 gaagctaaactagcccacctaaattggcaccggggagaatcgaacctaagaccttgaggaggagcacactctaaggtcccaagccaacaccaccacgcca 38374662  T
Q  210 acccaagtgggtt 222  Q
    |||||||||||||    
T  38374663 acccaagtgggtt 38374675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 151 - 222
Target Start/End: Complemental strand, 7801251 - 7801180
Alignment:
Q  151 gaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggtt 222  Q
    ||||||||||| |||| ||| |||||| |||||  |||||||   ||||||||||||||| |||||||||||    
T  7801251 gaacctgagaccttgaagaggagcacactcccaggtcccaagtcaataccaccaggccaaaccaagtgggtt 7801180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 151 - 222
Target Start/End: Original strand, 20335836 - 20335907
Alignment:
Q  151 gaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggtt 222  Q
    ||||||||||| | |||||| |||||| |||||| ||||||||  ||||| | || ||||||||||||||||    
T  20335836 gaacctgagacctcgaggaggagcacactcccaagtcccaagccaatacctctagaccaacccaagtgggtt 20335907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 108 - 219
Target Start/End: Original strand, 37162312 - 37162423
Alignment:
Q  108 aagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggc 207  Q
    ||||||||||| ||| || || |||||||| |  | || ||| |||| |||||| ||||| ||||||||| ||||||||| ||||  | |||||| ||||    
T  37162312 aagaagctaaactaatcccctcaaattggcaccagagagaatcgaacttgagaccttgagaagaagcacactcccaaatctcaagtctttaccactaggc 37162411  T
Q  208 caacccaagtgg 219  Q
    ||||| ||||||    
T  37162412 caaccgaagtgg 37162423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 111 - 218
Target Start/End: Complemental strand, 42712069 - 42711962
Alignment:
Q  111 aagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaa 210  Q
    ||||||||||| ||| | ||||||| | || |||| ||| |||| |||||| |||||||| |||||| |||||  | ||||||  ||||||| | |||||    
T  42712069 aagctaaattagcccacctaaattgacactagggagaatcgaacatgagaccttgaggaggagcacactcccatgtaccaagctaataccactaagccaa 42711970  T
Q  211 cccaagtg 218  Q
    ||||||||    
T  42711969 cccaagtg 42711962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 151 - 222
Target Start/End: Original strand, 45709713 - 45709784
Alignment:
Q  151 gaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggtt 222  Q
    ||||||||||| | |||||| |||||| || || |||||||||  ||||||| |||||||||||| ||||||    
T  45709713 gaacctgagacctcgaggaggagcacactctcagatcccaagctaataccactaggccaacccaaatgggtt 45709784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 222
Target Start/End: Original strand, 5579240 - 5579310
Alignment:
Q  152 aacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggtt 222  Q
    |||||||||| |||||||| |||||| ||| |  ||||||||  | ||||||||| |||||||||||||||    
T  5579240 aacctgagaccttgaggaggagcacactccaaggtcccaagccaacaccaccaggtcaacccaagtgggtt 5579310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 177
Target Start/End: Complemental strand, 21558243 - 21558173
Alignment:
Q  107 gaagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcaca 177  Q
    ||||||||||||||||||| | ||||||||| |  | || ||| ||||||||||| |||||||| ||||||    
T  21558243 gaagaagctaaattaacccacctaaattggcaccagagagaatcgaacctgagaccttgaggaggagcaca 21558173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 222
Target Start/End: Original strand, 42836008 - 42836077
Alignment:
Q  153 acctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggtt 222  Q
    ||||||| | |||||||  |||||| |||||  ||||||||  ||||||| |||||||||||||||||||    
T  42836008 acctgaggccttgaggaagagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 42836077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 221
Target Start/End: Complemental strand, 22927541 - 22927477
Alignment:
Q  157 gagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggt 221  Q
    ||||| || |||||||||||| ||| | ||||||||   ||||||| ||||||||||||||||||    
T  22927541 gagacctttaggagaagcacactcctagatcccaagttaataccactaggccaacccaagtgggt 22927477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 220
Target Start/End: Original strand, 29385749 - 29385817
Alignment:
Q  152 aacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtggg 220  Q
    |||||||||| |||||||| |||||| ||| || ||||||||  | |||| | ||||||||||||||||    
T  29385749 aacctgagaccttgaggaggagcacactccaaagtcccaagccaacaccatccggccaacccaagtggg 29385817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 222
Target Start/End: Original strand, 37233580 - 37233648
Alignment:
Q  154 cctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggtt 222  Q
    |||||||| || ||||| |||||| ||||| |||||||||  ||| ||||| | |||||||||||||||    
T  37233580 cctgagaccttaaggaggagcacactcccacatcccaagccaatatcaccaagtcaacccaagtgggtt 37233648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 220
Target Start/End: Original strand, 44628193 - 44628257
Alignment:
Q  156 tgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtggg 220  Q
    ||||||||||||||| |||||| ||| |  ||||||||  | | |||||||||||||||||||||    
T  44628193 tgagactttgaggaggagcacactccaaggtcccaagctaacaacaccaggccaacccaagtggg 44628257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 5e-25; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 108 - 222
Target Start/End: Original strand, 52116743 - 52116857
Alignment:
Q  108 aagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggc 207  Q
    |||||||||||||| ||| | | ||||||| || |||| ||||||||||||||| |||||||| |||||| |||||| ||||||||  ||||||||||||    
T  52116743 aagaagctaaattagcccaccttaattggcactagggagaattgaacctgagacattgaggaggagcacactcccaagtcccaagccaataccaccaggc 52116842  T
Q  208 caacccaagtgggtt 222  Q
    |||||||| ||||||    
T  52116843 caacccaactgggtt 52116857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 107 - 222
Target Start/End: Original strand, 9165156 - 9165271
Alignment:
Q  107 gaagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccagg 206  Q
    |||||| ||||| |||||| || |||||||| |  | || |||||||||||||||||||||||| |||||| |||||  ||||||||  ||||||| |||    
T  9165156 gaagaaactaaagtaaccccctcaaattggcaccagagagaattgaacctgagactttgaggaggagcacactcccaggtcccaagccaataccactagg 9165255  T
Q  207 ccaacccaagtgggtt 222  Q
    ||||||||||||||||    
T  9165256 ccaacccaagtgggtt 9165271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 108 - 220
Target Start/End: Original strand, 33700735 - 33700847
Alignment:
Q  108 aagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggc 207  Q
    |||||| |||| |||||| ||||||||||| |  | || ||| ||||||||||| |||||||| |||||| ||||| || ||||||  ||||||| ||||    
T  33700735 aagaagttaaactaacccccttaaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccagattccaagccaataccactaggc 33700834  T
Q  208 caacccaagtggg 220  Q
    |||||||||||||    
T  33700835 caacccaagtggg 33700847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 107 - 222
Target Start/End: Complemental strand, 2799977 - 2799862
Alignment:
Q  107 gaagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccagg 206  Q
    |||||||||||| |||||| || |||||||| |  | || ||| ||||||||||| |||||||| |||||| ||||| ||| ||||| |||||||| |||    
T  2799977 gaagaagctaaactaaccccctcaaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccagatctcaagcctataccactagg 2799878  T
Q  207 ccaacccaagtgggtt 222  Q
    |||| | |||||||||    
T  2799877 ccaagcgaagtgggtt 2799862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 107 - 222
Target Start/End: Complemental strand, 16893509 - 16893394
Alignment:
Q  107 gaagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccagg 206  Q
    ||||||||||||||| ||| || |||||| | | || |||||| ||||||||||| | |||||| || ||| ||||||||| |||||  |||||| ||||    
T  16893509 gaagaagctaaattagcccactcaaattgacaccggagaaaatcgaacctgagacctcgaggaggagtacactcccaaatctcaagccaataccaacagg 16893410  T
Q  207 ccaacccaagtgggtt 222  Q
     |||||||||||||||    
T  16893409 tcaacccaagtgggtt 16893394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 107 - 222
Target Start/End: Original strand, 46146228 - 46146343
Alignment:
Q  107 gaagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccagg 206  Q
    |||||||||| |||||| | |  |||||||| | | |||||||||||||||||||||||| | | |||||| ||||| |||||||||  |||||| | |     
T  46146228 gaagaagctatattaacacacccaaattggcaccgaggaaaattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcgga 46146327  T
Q  207 ccaacccaagtgggtt 222  Q
    ||||||||||||||||    
T  46146328 ccaacccaagtgggtt 46146343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 141 - 222
Target Start/End: Original strand, 19528322 - 19528403
Alignment:
Q  141 ggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggtt 222  Q
    ||||| ||| ||||||||||| |||||||| |||||| ||  | |||||||||  |||||||||||||||||||||||||||    
T  19528322 ggggagaatcgaacctgagaccttgaggaggagcacactcatagatcccaagccaataccaccaggccaacccaagtgggtt 19528403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 151 - 222
Target Start/End: Complemental strand, 6122865 - 6122794
Alignment:
Q  151 gaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggtt 222  Q
    ||||||||||| |||||||| |||||| |||||| |||||||| |||||||| ||| |||||||| ||||||    
T  6122865 gaacctgagaccttgaggaggagcacactcccaagtcccaagcctataccactagggcaacccaaatgggtt 6122794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 107 - 222
Target Start/End: Original strand, 8177143 - 8177258
Alignment:
Q  107 gaagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccagg 206  Q
    |||||||||||| |||||| || |||||||| |  | || ||| |||||||| || |||||||| |||||| ||||| |||||||||  ||||||| |||    
T  8177143 gaagaagctaaactaaccccctcaaattggcaccagagagaatcgaacctgaaaccttgaggaggagcacactcccagatcccaagccaataccactagg 8177242  T
Q  207 ccaacccaagtgggtt 222  Q
    ||||| ||| ||||||    
T  8177243 ccaactcaaatgggtt 8177258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 223
Target Start/End: Original strand, 31794276 - 31794341
Alignment:
Q  158 agactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggttc 223  Q
    |||| |||||||| |||||| |||||| ||||||||  ||||||| ||||||||||||||||||||    
T  31794276 agaccttgaggaggagcacactcccaagtcccaagccaataccactaggccaacccaagtgggttc 31794341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 110 - 222
Target Start/End: Complemental strand, 952623 - 952511
Alignment:
Q  110 gaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggcca 209  Q
    |||||||||||||||| | ||||||| |   ||||| |||  ||||||||||||||||||  |||||| |||||  ||||||||  | |||||||| |||    
T  952623 gaagctaaattaacccacctaaattgacatcggggagaatctaacctgagactttgaggatgagcacactcccaggtcccaagccaacaccaccagacca 952524  T
Q  210 acccaagtgggtt 222  Q
    || ||||||||||    
T  952523 actcaagtgggtt 952511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 222
Target Start/End: Complemental strand, 40257474 - 40257399
Alignment:
Q  147 aattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggtt 222  Q
    |||||||| |||||| | |||||| |||||| |||||  || |||||  |||||||||||||||||||||||||||    
T  40257474 aattgaacttgagacctcgaggaggagcacactcccaggtctcaagccaataccaccaggccaacccaagtgggtt 40257399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 222
Target Start/End: Complemental strand, 41508898 - 41508831
Alignment:
Q  155 ctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggtt 222  Q
    ||||||| |||||||| |||||| ||||| ||||||| |   ||||||||||||||||||||||||||    
T  41508898 ctgagaccttgaggaggagcacactcccagatcccaaaccagtaccaccaggccaacccaagtgggtt 41508831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 222
Target Start/End: Complemental strand, 51814605 - 51814494
Alignment:
Q  111 aagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaa 210  Q
    ||||||||||| ||| |  |||||||| | || || ||| ||||||||||| |||||||| |||||| || || ||| ||||   |||||| ||||||||    
T  51814605 aagctaaattagcccacccaaattggcaccggagagaatcgaacctgagaccttgaggaggagcacactctcagatctcaagtcaataccatcaggccaa 51814506  T
Q  211 cccaagtgggtt 222  Q
    ||||||||||||    
T  51814505 cccaagtgggtt 51814494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 222
Target Start/End: Complemental strand, 36371584 - 36371470
Alignment:
Q  108 aagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggc 207  Q
    ||||||||||| |||||| || ||||||||    | || ||| |||||| |||| |||||||| |||||| |||||  | ||||||  ||||||| ||||    
T  36371584 aagaagctaaactaaccccctcaaattggcatcagagagaatcgaacctcagaccttgaggaggagcacactcccaggttccaagccaataccactaggc 36371485  T
Q  208 caacccaagtgggtt 222  Q
    |||||||||||||||    
T  36371484 caacccaagtgggtt 36371470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 219
Target Start/End: Original strand, 15786325 - 15786393
Alignment:
Q  151 gaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgg 219  Q
    ||||||||||| |||||||| |||||| ||||| |||||||||  |||| || || |||||||||||||    
T  15786325 gaacctgagaccttgaggaggagcacactcccagatcccaagccaatactactagaccaacccaagtgg 15786393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 151 - 222
Target Start/End: Complemental strand, 12259331 - 12259260
Alignment:
Q  151 gaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggtt 222  Q
    |||| |||||||| |||||| |||||| ||||||||||||||   ||| ||| | |||||||||||||||||    
T  12259331 gaacttgagacttcgaggaggagcacactcccaaatcccaagttaatatcactatgccaacccaagtgggtt 12259260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 151 - 222
Target Start/End: Complemental strand, 51703850 - 51703779
Alignment:
Q  151 gaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggtt 222  Q
    |||||||| ||||||||||| |||||| ||||| || ||||||  ||||||| || ||||||||| ||||||    
T  51703850 gaacctgaaactttgaggaggagcacactcccagattccaagccaataccactagaccaacccaaatgggtt 51703779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 222
Target Start/End: Complemental strand, 21694535 - 21694446
Alignment:
Q  130 aaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggtt 222  Q
    |||||||| ||| | | ||| ||||||||||| ||||||||   |||| |||||| || |||||  ||||||||||| |||||||||||||||    
T  21694535 aaattggcactgagaagaatcgaacctgagaccttgaggag---cacactcccaagtctcaagccaataccaccaggtcaacccaagtgggtt 21694446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 222
Target Start/End: Complemental strand, 44961879 - 44961765
Alignment:
Q  108 aagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggc 207  Q
    |||||||||||||| ||| |  |||||| | || | || ||| |||||||||||  ||||||| |||||| ||  ||||| |||||  |||||||| | |    
T  44961879 aagaagctaaattagcccacccaaattgacactagagagaatcgaacctgagaccctgaggaggagcacactcttaaatctcaagctaataccacctgac 44961780  T
Q  208 caacccaagtgggtt 222  Q
    |||||||||||||||    
T  44961779 caacccaagtgggtt 44961765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 169
Target Start/End: Complemental strand, 15065079 - 15065018
Alignment:
Q  108 aagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgagga 169  Q
    |||||||||||||| ||| |  |||||| | | ||||||||||||||||||||| |||||||    
T  15065079 aagaagctaaattagcccacccaaattgacaccggggaaaattgaacctgagaccttgagga 15065018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 222
Target Start/End: Original strand, 15581137 - 15581217
Alignment:
Q  141 ggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggtt 222  Q
    ||||| ||||||||||||||| || || || |||||| ||| |  ||||||||  | |||||||||||||||||||||||||    
T  15581137 ggggagaattgaacctgagacctttag-aggagcacactccaaggtcccaagccaacaccaccaggccaacccaagtgggtt 15581217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 107 - 223
Target Start/End: Complemental strand, 2220087 - 2219971
Alignment:
Q  107 gaagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccagg 206  Q
    |||||| |||||||| |||  |||||||| |  ||| || ||| ||||||||||| | ||||||||||||| |  ||  | ||||||  ||||||||||     
T  2220087 gaagaaactaaattagcccatttaaattgacattggagagaatcgaacctgagacctcgaggagaagcacactttcaggttccaagccaataccaccaga 2219988  T
Q  207 ccaacccaagtgggttc 223  Q
     ||||||||||||||||    
T  2219987 acaacccaagtgggttc 2219971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 222
Target Start/End: Complemental strand, 8904526 - 8904414
Alignment:
Q  110 gaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggcca 209  Q
    |||| |||| |||||| || |||||||| |  | || ||| |||| |||||| |||||||| |||||| || || ||||||||   |||| || ||||||    
T  8904526 gaagttaaactaaccccctcaaattggcaccagagagaatcgaacttgagaccttgaggaggagcacactcacatatcccaagtcaatactactaggcca 8904427  T
Q  210 acccaagtgggtt 222  Q
    |||||||||||||    
T  8904426 acccaagtgggtt 8904414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 191
Target Start/End: Original strand, 10150870 - 10150914
Alignment:
Q  147 aattgaacctgagactttgaggagaagcacaatcccaaatcccaa 191  Q
    |||||||||||||||||||||||| || ||| |||||| ||||||    
T  10150870 aattgaacctgagactttgaggaggagtacactcccaagtcccaa 10150914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 222
Target Start/End: Original strand, 16169974 - 16170054
Alignment:
Q  142 gggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggtt 222  Q
    |||| ||| |||||||| || |||||||| | |||| |||||  |||||||   |||||||||||| ||||||||||||||    
T  16169974 gggagaatcgaacctgaaaccttgaggaggaacacactcccaggtcccaagtcaataccaccaggctaacccaagtgggtt 16170054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 3e-23; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 107 - 222
Target Start/End: Complemental strand, 14339725 - 14339610
Alignment:
Q  107 gaagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccagg 206  Q
    ||||||||||||||| ||| | | ||||||| || |||| ||| ||||||||||| |||||||| |||||| |||||||||||||||  |||||||||||    
T  14339725 gaagaagctaaattagcccaccttaattggcactagggagaatcgaacctgagacattgaggaggagcacactcccaaatcccaagccaataccaccagg 14339626  T
Q  207 ccaacccaagtgggtt 222  Q
    |||| |||| ||||||    
T  14339625 ccaatccaactgggtt 14339610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 107 - 222
Target Start/End: Complemental strand, 30311421 - 30311306
Alignment:
Q  107 gaagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccagg 206  Q
    |||||||||||| |||||| || |||||||| |    || ||| ||||||||||| |||||||| |||||| ||||| ||||||||| |||||||| |||    
T  30311421 gaagaagctaaactaaccccctcaaattggcaccaaagagaatcgaacctgagaccttgaggaggagcacactcccagatcccaagcctataccactagg 30311322  T
Q  207 ccaacccaagtgggtt 222  Q
    |||||||| |||||||    
T  30311321 ccaacccaggtgggtt 30311306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 108 - 222
Target Start/End: Original strand, 15048023 - 15048137
Alignment:
Q  108 aagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggc 207  Q
    |||||| |||| |||||| || |||||||| |  | || ||| ||||||||||| |||||||| |||||| ||||| ||||||||| |||||||  | ||    
T  15048023 aagaagttaaactaaccccctcaaattggcaccagagataatcgaacctgagaccttgaggaggagcacattcccagatcccaagcctataccattaagc 15048122  T
Q  208 caacccaagtgggtt 222  Q
    |||||||||||||||    
T  15048123 caacccaagtgggtt 15048137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 4222212 - 4222140
Alignment:
Q  151 gaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggttc 223  Q
    |||||| ||||||||||||| |||||| ||||| |||||||||  ||||||| | ||||||||||||||||||    
T  4222212 gaacctaagactttgaggaggagcacactcccagatcccaagccaataccactaagccaacccaagtgggttc 4222140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 107 - 222
Target Start/End: Original strand, 44743816 - 44743925
Alignment:
Q  107 gaagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccagg 206  Q
    ||||||||||||||||||| |  |||||||| |||| || ||| ||||||||||| | |||||| |||||| ||||| ||||||||      |||||||     
T  44743816 gaagaagctaaattaacccacccaaattggcactggagataatcgaacctgagacctcgaggaggagcacactcccagatcccaag------ccaccaga 44743909  T
Q  207 ccaacccaagtgggtt 222  Q
    ||||||||||||||||    
T  44743910 ccaacccaagtgggtt 44743925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 107 - 222
Target Start/End: Original strand, 11642170 - 11642285
Alignment:
Q  107 gaagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccagg 206  Q
    |||||||||||| |||||| ||||||||| | ||   || ||| ||||||||||| |||||||| | ||||||| || ||||||||  |||||||  |||    
T  11642170 gaagaagctaaactaaccctcttaaattgacactaaagataatcgaacctgagaccttgaggaggatcacaatctcagatcccaagtttataccagtagg 11642269  T
Q  207 ccaacccaagtgggtt 222  Q
    |||| |||||||||||    
T  11642270 ccaatccaagtgggtt 11642285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 222
Target Start/End: Original strand, 31520570 - 31520681
Alignment:
Q  111 aagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaa 210  Q
    ||||||||||| ||| || |||||| | |||| || |||  ||||| |||| | |||||| |||||| ||||| |||||||||  || ||||||||||||    
T  31520570 aagctaaattagcccactcaaattgacactggagagaatcaaacctaagacctcgaggaggagcacactcccagatcccaagccaatgccaccaggccaa 31520669  T
Q  211 cccaagtgggtt 222  Q
    ||||||||||||    
T  31520670 cccaagtgggtt 31520681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 222
Target Start/End: Original strand, 27093367 - 27093437
Alignment:
Q  152 aacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggtt 222  Q
    |||||||||| |||||||| |||||| |||||| | ||||||  ||||||| |||||||||||||||||||    
T  27093367 aacctgagaccttgaggaggagcacactcccaagttccaagccaataccactaggccaacccaagtgggtt 27093437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 107 - 221
Target Start/End: Original strand, 47454578 - 47454692
Alignment:
Q  107 gaagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccagg 206  Q
    |||||||||||| |||||| | |||||||||  |||||| ||| ||||||||||| | |||||| |||||| ||| | ||| |||||  ||||||| ||     
T  47454578 gaagaagctaaactaacccacctaaattggcattggggagaatcgaacctgagacctcgaggaggagcacactccaagatctcaagccaataccactaga 47454677  T
Q  207 ccaacccaagtgggt 221  Q
     ||||||||||||||    
T  47454678 acaacccaagtgggt 47454692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 107 - 215
Target Start/End: Complemental strand, 2667977 - 2667869
Alignment:
Q  107 gaagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccagg 206  Q
    |||||||||||| || ||| | ||||||| | || | || ||| ||||||||||| | |||||  |||||| ||||| |||||||||  |||||||||||    
T  2667977 gaagaagctaaactagcccacctaaattgacactagagataatcgaacctgagacctcgaggaagagcacactcccagatcccaagccaataccaccagg 2667878  T
Q  207 ccaacccaa 215  Q
    |||||||||    
T  2667877 ccaacccaa 2667869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 223
Target Start/End: Original strand, 27923048 - 27923120
Alignment:
Q  151 gaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggttc 223  Q
    |||||||||||| ||||||| |||||| | |||  ||||||||  ||||||||||||||||| ||||||||||    
T  27923048 gaacctgagactatgaggaggagcacacttccatgtcccaagccaataccaccaggccaacctaagtgggttc 27923120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 222
Target Start/End: Complemental strand, 36720452 - 36720381
Alignment:
Q  151 gaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggtt 222  Q
    |||||||| || | |||||| |||||| ||||| |||||||||  |||||||||| ||||||||||||||||    
T  36720452 gaacctgaaacctcgaggaggagcacactcccatatcccaagccaataccaccagaccaacccaagtgggtt 36720381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 223
Target Start/End: Original strand, 37788428 - 37788542
Alignment:
Q  108 aagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggc 207  Q
    |||||||||||||||||| || |||||||| || | || ||| ||||||||||| |||||||| |||||| ||| |  | |||||   |||||||  |||    
T  37788428 aagaagctaaattaaccc-ctcaaattggcactagagagaatcgaacctgagaccttgaggaggagcacactcctaggttccaagtcaataccactgggc 37788526  T
Q  208 caacccaagtgggttc 223  Q
    ||||||||||||||||    
T  37788527 caacccaagtgggttc 37788542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 222
Target Start/End: Complemental strand, 46518743 - 46518628
Alignment:
Q  107 gaagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccagg 206  Q
    |||||||||||| |||||| || ||||||||    | || |||  ||||||| || |||||||| |||||| ||||| |||||||||  ||||||| | |    
T  46518743 gaagaagctaaactaaccccctcaaattggcatcagagagaatcaaacctgaaaccttgaggaggagcacactcccagatcccaagccaataccactatg 46518644  T
Q  207 ccaacccaagtgggtt 222  Q
    ||||||||||||||||    
T  46518643 ccaacccaagtgggtt 46518628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 222
Target Start/End: Original strand, 51903839 - 51903954
Alignment:
Q  107 gaagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccagg 206  Q
    ||||||||||||||| ||| || |||||| | | || || ||| |||||||||||   |||||| |||||| ||||| |||||||||  |||||| ||||    
T  51903839 gaagaagctaaattagcccactcaaattgacaccggagagaatcgaacctgagaccacgaggaggagcacactcccagatcccaagccaataccaacagg 51903938  T
Q  207 ccaacccaagtgggtt 222  Q
     ||||||| |||||||    
T  51903939 tcaacccaggtgggtt 51903954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 214
Target Start/End: Complemental strand, 11612413 - 11612307
Alignment:
Q  108 aagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggc 207  Q
    ||||||||||||||  |  | ||||||||| | |||||  || ||||||||||| || ||||| |||||| |||||  ||||||| | ||||||||||||    
T  11612413 aagaagctaaattagtcgacctaaattggcaccggggagcatcgaacctgagaccttaaggaggagcacactcccagctcccaagtgaataccaccaggc 11612314  T
Q  208 caaccca 214  Q
    |||||||    
T  11612313 caaccca 11612307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 224
Target Start/End: Original strand, 2597225 - 2597298
Alignment:
Q  151 gaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggttca 224  Q
    ||||||||||| |  ||||| |||||| ||| |||||| ||||  |||||||||| ||||||||||||||||||    
T  2597225 gaacctgagacctcaaggaggagcacactcctaaatccgaagccaataccaccagaccaacccaagtgggttca 2597298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 215
Target Start/End: Original strand, 4844472 - 4844580
Alignment:
Q  107 gaagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccagg 206  Q
    ||||||||||||||| ||| |  |||||||| | || || ||| || |||||||| | |||||| |||||| ||||| ||||||||   ||||||||||     
T  4844472 gaagaagctaaattagcccacacaaattggcaccggagagaatcgatcctgagacctcgaggaggagcacactcccagatcccaagtcaataccaccaga 4844571  T
Q  207 ccaacccaa 215  Q
    |||||||||    
T  4844572 ccaacccaa 4844580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 215
Target Start/End: Original strand, 4870168 - 4870276
Alignment:
Q  107 gaagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccagg 206  Q
    ||||||||||||||| ||| |  |||||||| | || || ||| || |||||||| | |||||| |||||| ||||| ||||||||   ||||||||||     
T  4870168 gaagaagctaaattagcccacacaaattggcaccggagagaatcgatcctgagacctcgaggaggagcacactcccagatcccaagtcaataccaccaga 4870267  T
Q  207 ccaacccaa 215  Q
    |||||||||    
T  4870268 ccaacccaa 4870276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 222
Target Start/End: Original strand, 5499391 - 5499483
Alignment:
Q  130 aaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggtt 222  Q
    |||||||| | ||||| ||| |||||| |||| || ||||| |||||| || || ||| ||||   |||||||||||||||||||||||||||    
T  5499391 aaattggcaccggggagaatagaaccttagaccttaaggaggagcacactctcagatctcaagtcaataccaccaggccaacccaagtgggtt 5499483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 151 - 222
Target Start/End: Complemental strand, 3055065 - 3054994
Alignment:
Q  151 gaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggtt 222  Q
    ||||||||||  ||||||||||||||  ||| |  ||||||||  | |||||||||||||||||||||||||    
T  3055065 gaacctgagatcttgaggagaagcacgctccaaggtcccaagccaacaccaccaggccaacccaagtgggtt 3054994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 151 - 222
Target Start/End: Complemental strand, 8051285 - 8051214
Alignment:
Q  151 gaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggtt 222  Q
    |||| |||||| | ||||||||||| | | |||  ||||||||  |||||||||||||||||||||||||||    
T  8051285 gaacttgagacctcgaggagaagcatactgccaggtcccaagccaataccaccaggccaacccaagtgggtt 8051214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 151 - 222
Target Start/End: Original strand, 10499114 - 10499185
Alignment:
Q  151 gaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggtt 222  Q
    ||||||||||| |  ||||  |||| | ||||| |||||||||  |||||||||||||||||||||||||||    
T  10499114 gaacctgagacctcaaggaagagcagactcccagatcccaagccaataccaccaggccaacccaagtgggtt 10499185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 222
Target Start/End: Original strand, 28703366 - 28703480
Alignment:
Q  108 aagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggc 207  Q
    ||||||||||| |||||  || |||||||| |  | || ||| ||||||||||| |||| ||| |||||| ||||| |||||||||  ||| |||  | |    
T  28703366 aagaagctaaactaacctcctcaaattggcaccagagagaatcgaacctgagaccttgaagaggagcacactcccagatcccaagctaatatcactggac 28703465  T
Q  208 caacccaagtgggtt 222  Q
    |||||||||||||||    
T  28703466 caacccaagtgggtt 28703480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 165 - 222
Target Start/End: Original strand, 31788989 - 31789046
Alignment:
Q  165 gaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggtt 222  Q
    |||||| |||||| ||||| |||||||||  ||| ||| |||||||||||||||||||    
T  31788989 gaggaggagcacactcccagatcccaagccaataacactaggccaacccaagtgggtt 31789046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 114 - 219
Target Start/End: Complemental strand, 53413053 - 53412948
Alignment:
Q  114 ctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaaccc 213  Q
    ||||| |||||| || |||||||| |  | || ||||||||||||||| |||||||| |||||| |||||  |  |||||  ||||||| || |||||||    
T  53413053 ctaaactaaccccctcaaattggcaccagagagaattgaacctgagaccttgaggaggagcacactcccaggttacaagccaataccactagaccaaccc 53412954  T
Q  214 aagtgg 219  Q
    ||||||    
T  53412953 aagtgg 53412948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 222
Target Start/End: Complemental strand, 8170748 - 8170672
Alignment:
Q  146 aaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggtt 222  Q
    |||| ||||||||||| ||||| || |||||| |||||| |  |||||  ||||||| |||||||||||| ||||||    
T  8170748 aaatcgaacctgagaccttgagtaggagcacactcccaagtttcaagccaataccactaggccaacccaaatgggtt 8170672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 107 - 222
Target Start/End: Original strand, 10445100 - 10445216
Alignment:
Q  107 gaagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtata-ccaccag 205  Q
    ||||||||||||||| ||| || ||||| || |  | || ||| ||||||||||| | |||||| |||||| |||||  ||||||||  ||  |||| ||    
T  10445100 gaagaagctaaattagcccactcaaattagcaccagagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaattgccactag 10445199  T
Q  206 gccaacccaagtgggtt 222  Q
    |||||||||||||||||    
T  10445200 gccaacccaagtgggtt 10445216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 130 - 222
Target Start/End: Complemental strand, 30232422 - 30232330
Alignment:
Q  130 aaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggtt 222  Q
    |||||||| | || || ||| |||||||||||  ||||||| |||||| | ||| ||| ||| |  ||||||||||| |||||||||||||||    
T  30232422 aaattggcaccggagagaatggaacctgagaccatgaggaggagcacagttccagatcgcaaaccaataccaccagggcaacccaagtgggtt 30232330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 4e-22; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 107 - 224
Target Start/End: Complemental strand, 18540413 - 18540296
Alignment:
Q  107 gaagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccagg 206  Q
    ||||||||||||||||||| || |||||||| |  | || ||| ||||||||||| ||||||||||| ||| |||||  ||||||||  ||||||| |||    
T  18540413 gaagaagctaaattaaccctctcaaattggcaccagagagaatcgaacctgagaccttgaggagaagtacactcccaggtcccaagccaataccactagg 18540314  T
Q  207 ccaacccaagtgggttca 224  Q
    ||||||||||||||||||    
T  18540313 ccaacccaagtgggttca 18540296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 108 - 225
Target Start/End: Complemental strand, 968476 - 968359
Alignment:
Q  108 aagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggc 207  Q
    |||||||||||||| ||| | |||||||||   || || ||| ||||||||||| | |||||| |||||| |||||  ||||||||  ||||||||||||    
T  968476 aagaagctaaattagcccacctaaattggcatcggagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccaggc 968377  T
Q  208 caacccaagtgggttcac 225  Q
    |||| |||||||||||||    
T  968376 caactcaagtgggttcac 968359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 111 - 220
Target Start/End: Complemental strand, 2203603 - 2203494
Alignment:
Q  111 aagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaa 210  Q
    ||||||||||| ||| |  |||||||| | ||||| |||||| |||||||| |||||||| |||||| |||||  ||||||||  ||||||| |||||||    
T  2203603 aagctaaattagcccacccaaattggcaccggggagaattgaccctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaa 2203504  T
Q  211 cccaagtggg 220  Q
    ||||||||||    
T  2203503 cccaagtggg 2203494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 110 - 222
Target Start/End: Original strand, 35641865 - 35641977
Alignment:
Q  110 gaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggcca 209  Q
    |||||||||||| |||   ||||||||  |||| || ||| ||||||||||| | |||||| |||||| ||||||||| |||||  |||||||||| |||    
T  35641865 gaagctaaattagcccatctaaattggttctggagagaatcgaacctgagacatcgaggaggagcacactcccaaatctcaagccgataccaccagacca 35641964  T
Q  210 acccaagtgggtt 222  Q
    |||||||||||||    
T  35641965 acccaagtgggtt 35641977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 107 - 222
Target Start/End: Complemental strand, 16852455 - 16852340
Alignment:
Q  107 gaagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccagg 206  Q
    |||||||||||| || ||| | ||||||||| ||  ||| ||| ||||||||||| | |||||| |||||| |||||  ||||||||  ||||||| |||    
T  16852455 gaagaagctaaaatagcccacctaaattggcactaaggagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccactagg 16852356  T
Q  207 ccaacccaagtgggtt 222  Q
    ||||||||||||||||    
T  16852355 ccaacccaagtgggtt 16852340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 147 - 222
Target Start/End: Original strand, 23361650 - 23361725
Alignment:
Q  147 aattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggtt 222  Q
    ||||||||||||||| |||||||| |||||| ||||| ||||||||   ||||||||||| |||||||||||||||    
T  23361650 aattgaacctgagaccttgaggaggagcacactcccatatcccaagtcaataccaccaggtcaacccaagtgggtt 23361725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 147 - 222
Target Start/End: Original strand, 30483885 - 30483960
Alignment:
Q  147 aattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggtt 222  Q
    |||||||||||||||| ||||||| |||||| ||||| |||||||||  |||||||  ||||||||||||||||||    
T  30483885 aattgaacctgagactctgaggaggagcacactcccatatcccaagccaataccactgggccaacccaagtgggtt 30483960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 151 - 222
Target Start/End: Complemental strand, 11819847 - 11819776
Alignment:
Q  151 gaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggtt 222  Q
    ||||||||||| |||||||| |||||| |||||| |||||||| |||||||| ||| |||||||| ||||||    
T  11819847 gaacctgagaccttgaggaggagcacactcccaagtcccaagcctataccactagggcaacccaaatgggtt 11819776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 151 - 222
Target Start/End: Complemental strand, 27750801 - 27750730
Alignment:
Q  151 gaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggtt 222  Q
    ||||||||||| |||||||| |||||| |||||| |||||||| |||||||| ||| |||||||| ||||||    
T  27750801 gaacctgagaccttgaggaggagcacactcccaagtcccaagcctataccacgagggcaacccaaatgggtt 27750730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 107 - 222
Target Start/End: Complemental strand, 28783175 - 28783060
Alignment:
Q  107 gaagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccagg 206  Q
    ||||||||||||||| ||| |  |||||||| | | ||| ||| |||| |||||| |||||||| |||||| |||||  || |||||  ||||||||| |    
T  28783175 gaagaagctaaattagcccacccaaattggcaccgaggagaatcgaacatgagaccttgaggaggagcacactcccaggtctcaagccaataccaccaag 28783076  T
Q  207 ccaacccaagtgggtt 222  Q
    ||||||||||||||||    
T  28783075 ccaacccaagtgggtt 28783060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 222
Target Start/End: Original strand, 44780120 - 44780190
Alignment:
Q  152 aacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggtt 222  Q
    |||||||||| |||||||| |||||| |||||| ||||||||  || |||| |||||||||||||||||||    
T  44780120 aacctgagaccttgaggaggagcacactcccaagtcccaagccaatgccactaggccaacccaagtgggtt 44780190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 142 - 222
Target Start/End: Original strand, 19703483 - 19703563
Alignment:
Q  142 gggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggtt 222  Q
    |||| ||| ||||||||||| |||||||| |||||| || ||  ||||||||  ||||||| |||||||||||||||||||    
T  19703483 gggagaatcgaacctgagaccttgaggaggagcacactctcaggtcccaagccaataccactaggccaacccaagtgggtt 19703563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 150 - 222
Target Start/End: Complemental strand, 26688937 - 26688865
Alignment:
Q  150 tgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggtt 222  Q
    |||||||||||| |||||||| |||||| ||| |  ||||||||  | |||||||||||||||||||||||||    
T  26688937 tgaacctgagaccttgaggaggagcacactccaaggtcccaagccaacaccaccaggccaacccaagtgggtt 26688865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 202
Target Start/End: Complemental strand, 6536635 - 6536540
Alignment:
Q  107 gaagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccac 202  Q
    ||||||||||||||||||| | ||||||||| |  | || ||||||||||||||| |||||||| |||||| ||| |  ||||||||  |||||||    
T  6536635 gaagaagctaaattaacccacctaaattggcaccagagagaattgaacctgagaccttgaggaggagcacactcctaggtcccaagccaataccac 6536540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 221
Target Start/End: Original strand, 29858014 - 29858124
Alignment:
Q  111 aagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaa 210  Q
    ||||||||||| ||| | ||||||||| | | ||  ||| ||||||||||| | |||||| |||||| ||||   ||||||||  |||||||||||||||    
T  29858014 aagctaaattagcccacctaaattggcaccgaggggaatcgaacctgagacctcgaggaggagcacactccctggtcccaagccaataccaccaggccaa 29858113  T
Q  211 cccaagtgggt 221  Q
     ||||||||||    
T  29858114 tccaagtgggt 29858124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 224
Target Start/End: Complemental strand, 40591799 - 40591730
Alignment:
Q  152 aacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggttca 224  Q
    |||||||||||||||||||   |||| |||||| ||| ||||  |||||||||||||||| ||||||||||||    
T  40591799 aacctgagactttgaggag---cacactcccaagtccgaagccaataccaccaggccaacacaagtgggttca 40591730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 220
Target Start/End: Complemental strand, 3624651 - 3624582
Alignment:
Q  151 gaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtggg 220  Q
    ||||||||||| |||| ||| |||||| |||||  ||||||||  ||||||| |||||||||||||||||    
T  3624651 gaacctgagaccttgaagaggagcacactcccaggtcccaagccaataccactaggccaacccaagtggg 3624582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 222
Target Start/End: Complemental strand, 4830560 - 4830487
Alignment:
Q  149 ttgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggtt 222  Q
    ||||||||||||| | |||||| | |||| || || ||||||| |  |||||||||||||||||||||||||||    
T  4830560 ttgaacctgagacctcgaggaggaacacactctcagatcccaaacaaataccaccaggccaacccaagtgggtt 4830487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 6436564 - 6436632
Alignment:
Q  155 ctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggttc 223  Q
    ||||||| ||| |||| |||||| ||| || ||||||||  ||||||||||| ||||||||||||||||    
T  6436564 ctgagaccttgcggaggagcacactcctaagtcccaagccaataccaccagggcaacccaagtgggttc 6436632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 222
Target Start/End: Complemental strand, 29431067 - 29431011
Alignment:
Q  166 aggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggtt 222  Q
    ||||| |||||| |||||| ||||||||  ||||| |||||||||||||||||||||    
T  29431067 aggaggagcacactcccaagtcccaagccaataccgccaggccaacccaagtgggtt 29431011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 107 - 222
Target Start/End: Complemental strand, 8485114 - 8484999
Alignment:
Q  107 gaagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccagg 206  Q
    ||||||||||||||| ||| | ||||||||| | || || ||| |||  |||||| |  | ||| |||||| || ||  ||||||||  |||||||||||    
T  8485114 gaagaagctaaattagcccacctaaattggcaccggagagaatcgaaaatgagacctcaaagaggagcacactcacaggtcccaagcaaataccaccagg 8485015  T
Q  207 ccaacccaagtgggtt 222  Q
    ||||||||||||||||    
T  8485014 ccaacccaagtgggtt 8484999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 222
Target Start/End: Complemental strand, 6530896 - 6530807
Alignment:
Q  132 attggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggtt 222  Q
    |||||| | ||||| ||| ||||||||||| ||||| || |||||| ||| |  ||||||||  | |||||||||||||||||||||||||    
T  6530896 attggcaccggggagaatcgaacctgagacattgag-aggagcacactcctaggtcccaagccaacaccaccaggccaacccaagtgggtt 6530807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 193
Target Start/End: Complemental strand, 34628713 - 34628671
Alignment:
Q  151 gaacctgagactttgaggagaagcacaatcccaaatcccaagc 193  Q
    |||||||||||||||||||||| |||| ||||| |||||||||    
T  34628713 gaacctgagactttgaggagaaacacactcccagatcccaagc 34628671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 222
Target Start/End: Original strand, 20994465 - 20994534
Alignment:
Q  154 cctgagactttgagg-agaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggtt 222  Q
    ||||||||||||||| || |||||| |||||  |||||||   ||||||| |||||||||||||||||||    
T  20994465 cctgagactttgagggaggagcacactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 20994534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 222
Target Start/End: Complemental strand, 8059712 - 8059632
Alignment:
Q  142 gggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggtt 222  Q
    |||| ||| ||||||||||| |||||||| | |||| || || || |||||   |||||| ||||||||||||||||||||    
T  8059712 gggagaatggaacctgagaccttgaggaggatcacactctcacatgccaagtcaataccatcaggccaacccaagtgggtt 8059632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 130 - 222
Target Start/End: Complemental strand, 35287808 - 35287716
Alignment:
Q  130 aaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggtt 222  Q
    |||||||| | || || ||| |||| ||| || |||||||| |||||| ||| ||||| |||||  | ||||||||||| |||||||||||||    
T  35287808 aaattggcaccggagagaatcgaacatgataccttgaggaggagcacactccaaaatctcaagccaacaccaccaggcctacccaagtgggtt 35287716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 7e-21; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 107 - 222
Target Start/End: Original strand, 23052484 - 23052599
Alignment:
Q  107 gaagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccagg 206  Q
    |||||| |||||||| ||| |  ||| |||| || |||| ||| ||||||||||| ||||||||||||||| |||||| ||||||||  |||||||||||    
T  23052484 gaagaaactaaattagcccacccaaactggcactagggagaatcgaacctgagaccttgaggagaagcacactcccaagtcccaagccaataccaccagg 23052583  T
Q  207 ccaacccaagtgggtt 222  Q
    |||||| |||||||||    
T  23052584 ccaacctaagtgggtt 23052599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 107 - 222
Target Start/End: Complemental strand, 37480190 - 37480075
Alignment:
Q  107 gaagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccagg 206  Q
    ||||||||||||||| ||| |  |||||||  | ||||| ||| ||||||||||| |||||||| |||||| || ||  ||||||||  |||||||||||    
T  37480190 gaagaagctaaattagcccacccaaattgggaccggggagaatcgaacctgagaccttgaggaggagcacactctcaggtcccaagccaataccaccagg 37480091  T
Q  207 ccaacccaagtgggtt 222  Q
    ||||||||||||||||    
T  37480090 ccaacccaagtgggtt 37480075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 111 - 222
Target Start/End: Complemental strand, 39715103 - 39714992
Alignment:
Q  111 aagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaa 210  Q
    ||||||||||| ||| | |||||||| |||||||| ||| ||||||||||| | |||||| |||||| |||||  |||||||   ||||||||| |||||    
T  39715103 aagctaaattagcccacctaaattggtgctggggagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagtcaataccaccatgccaa 39715004  T
Q  211 cccaagtgggtt 222  Q
    ||||||||||||    
T  39715003 cccaagtgggtt 39714992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 107 - 222
Target Start/End: Original strand, 7798997 - 7799111
Alignment:
Q  107 gaagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccagg 206  Q
    ||||||||||||||| ||  ||||||||||| |||| || ||| ||| ||||||  | |||||| |||||| |||||| ||||||||  |||||||||||    
T  7798997 gaagaagctaaattagcca-cttaaattggcactggagagaatcgaatctgagatctcgaggaggagcacactcccaagtcccaagccaataccaccagg 7799095  T
Q  207 ccaacccaagtgggtt 222  Q
     |||||||||||||||    
T  7799096 acaacccaagtgggtt 7799111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 151 - 223
Target Start/End: Original strand, 42327400 - 42327472
Alignment:
Q  151 gaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggttc 223  Q
    ||||||||||| |||||||| |||||| |||||  ||||||||  ||||||| ||||||||||||||||||||    
T  42327400 gaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggttc 42327472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 107 - 222
Target Start/End: Complemental strand, 29503385 - 29503271
Alignment:
Q  107 gaagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccagg 206  Q
    ||||||||||||||  ||| ||||||||| | | ||| | ||| ||||||||||| |||||||| |||||| |||||  |||||| |  ||||||| |||    
T  29503385 gaagaagctaaatttgcccacttaaattgacaccggg-agaatcgaacctgagaccttgaggaggagcacactcccaggtcccaaaccaataccactagg 29503287  T
Q  207 ccaacccaagtgggtt 222  Q
    ||||||||||||||||    
T  29503286 ccaacccaagtgggtt 29503271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 222
Target Start/End: Complemental strand, 11062430 - 11062360
Alignment:
Q  152 aacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggtt 222  Q
    |||||||||| ||||||||||||||| |||||| | ||||||  ||| ||| |||||||||||||||||||    
T  11062430 aacctgagaccttgaggagaagcacactcccaagttccaagccaatatcactaggccaacccaagtgggtt 11062360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 108 - 222
Target Start/End: Complemental strand, 19016145 - 19016031
Alignment:
Q  108 aagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggc 207  Q
    |||||||||||||| ||  ||||||||||| | ||||| |||  ||| |||||| | |||||| |||||| |||||| || |||||  |||||| ||| |    
T  19016145 aagaagctaaattagcctacttaaattggcaccggggagaatcaaacttgagacctcgaggaggagcacactcccaagtctcaagccaataccatcagac 19016046  T
Q  208 caacccaagtgggtt 222  Q
    |||||||||||||||    
T  19016045 caacccaagtgggtt 19016031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 108 - 223
Target Start/End: Complemental strand, 42922529 - 42922413
Alignment:
Q  108 aagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagac-tttgaggagaagcacaatcccaaatcccaagcgtataccaccagg 206  Q
    ||||||||||| ||||||  | |||||||| |  | || ||| ||||||||||| ||||||||| |||||| |||||  | ||||||  ||||||| |||    
T  42922529 aagaagctaaactaaccccatcaaattggcaccagagagaatcgaacctgagacctttgaggaggagcacactcccaggttccaagccaataccactagg 42922430  T
Q  207 ccaacccaagtgggttc 223  Q
    |||||||||||||||||    
T  42922429 ccaacccaagtgggttc 42922413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 222
Target Start/End: Complemental strand, 1435131 - 1435064
Alignment:
Q  155 ctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggtt 222  Q
    ||||||| ||||||||||||||| ||| |||||||||||   |||||| | |||||||||||||||||    
T  1435131 ctgagaccttgaggagaagcacactcctaaatcccaagccagtaccactatgccaacccaagtgggtt 1435064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 222
Target Start/End: Original strand, 21195681 - 21195752
Alignment:
Q  151 gaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggtt 222  Q
    ||||||||||| |||||||| |||||| |||||| | |||||| |||||||| ||| |||||||| ||||||    
T  21195681 gaacctgagaccttgaggaggagcacactcccaagttccaagcctataccactagggcaacccaaatgggtt 21195752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 222
Target Start/End: Complemental strand, 42602669 - 42602554
Alignment:
Q  107 gaagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccagg 206  Q
    ||||||||||||||| ||| |  |||||||| | || || |||  ||||| |||| ||||| || |||||| |||||  ||||||||  ||||||| |||    
T  42602669 gaagaagctaaattagcccacccaaattggcaccggagagaatcaaacctaagaccttgagaaggagcacactcccaggtcccaagccaataccactagg 42602570  T
Q  207 ccaacccaagtgggtt 222  Q
    ||||||||||||||||    
T  42602569 ccaacccaagtgggtt 42602554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 222
Target Start/End: Complemental strand, 14500391 - 14500277
Alignment:
Q  108 aagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggc 207  Q
    ||||||||||| || ||| || |||||||| |  | || ||| ||| ||||||| | |||||| |||||| ||||| ||| ||||| |||||||| ||||    
T  14500391 aagaagctaaactatccccctcaaattggcaccagagagaatcgaatctgagacctagaggaggagcacactcccagatctcaagcttataccactaggc 14500292  T
Q  208 caacccaagtgggtt 222  Q
    ||| |||||||||||    
T  14500291 caaaccaagtgggtt 14500277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 221
Target Start/End: Original strand, 16918584 - 16918653
Alignment:
Q  152 aacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggt 221  Q
    ||||| |||| |||||||| |||||| ||||| ||||||| |  ||||||| ||||||||||||||||||    
T  16918584 aacctaagaccttgaggaggagcacactcccagatcccaaaccaataccactaggccaacccaagtgggt 16918653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 107 - 224
Target Start/End: Complemental strand, 26482207 - 26482091
Alignment:
Q  107 gaagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccagg 206  Q
    |||||||| |||||| ||| || |||||||| ||| ||| ||| ||||||||||| |||| ||| |||||| ||| |  ||||||||  | |||| ||||    
T  26482207 gaagaagccaaattagcccactgaaattggcactgaggagaatcgaacctgagaccttga-gaggagcacactcctaggtcccaagccaacaccatcagg 26482109  T
Q  207 ccaacccaagtgggttca 224  Q
    |||||| |||||||||||    
T  26482108 ccaacctaagtgggttca 26482091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 163 - 222
Target Start/End: Original strand, 16381671 - 16381730
Alignment:
Q  163 ttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggtt 222  Q
    |||||||| || ||| || || ||||||||| |||||||| |||||||||||||||||||    
T  16381671 ttgaggaggagaacactctcagatcccaagcctataccactaggccaacccaagtgggtt 16381730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 115 - 222
Target Start/End: Original strand, 29197345 - 29197452
Alignment:
Q  115 taaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaaccca 214  Q
    ||||||| ||| | ||||||||| | ||| | ||| |||| |||||| |  ||||| |||||| |||||| |||||||   ||||||||| |||||||||    
T  29197345 taaattagcccacctaaattggcaccgggaagaatcgaacatgagacatcaaggaggagcacactcccaagtcccaagtcaataccaccaagccaaccca 29197444  T
Q  215 agtgggtt 222  Q
    ||||||||    
T  29197445 agtgggtt 29197452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 107 - 222
Target Start/End: Original strand, 34041549 - 34041664
Alignment:
Q  107 gaagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccagg 206  Q
    |||||||||||| |||||| || |||||||| |  | |  |||  |||||||||| |||||||| |||||| || || |||| |||   ||||||| |||    
T  34041549 gaagaagctaaactaaccccctcaaattggcaccagagggaatcaaacctgagaccttgaggaggagcacactctcagatcctaagtcaataccactagg 34041648  T
Q  207 ccaacccaagtgggtt 222  Q
    ||||||||||||||||    
T  34041649 ccaacccaagtgggtt 34041664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 223
Target Start/End: Complemental strand, 18259803 - 18259729
Alignment:
Q  149 ttgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggttc 223  Q
    ||||||||||||| |  ||||| |||||| || |||||| |||||  |||||||||||||||| ||| |||||||    
T  18259803 ttgaacctgagacctataggaggagcacactctcaaatctcaagccaataccaccaggccaactcaaatgggttc 18259729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 165 - 222
Target Start/End: Complemental strand, 1729873 - 1729816
Alignment:
Q  165 gaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggtt 222  Q
    |||||| |||||| |||||| ||||||||  ||||||| || ||||||||||||||||    
T  1729873 gaggaggagcacactcccaagtcccaagccaataccactagcccaacccaagtgggtt 1729816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 107 - 224
Target Start/End: Original strand, 2750587 - 2750704
Alignment:
Q  107 gaagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccagg 206  Q
    |||||||||||| |||||| || |||||||| || | || ||| |||| |||||| |||||||  |||||| | ||  || |||||| |||||||| | |    
T  2750587 gaagaagctaaactaaccccctcaaattggcactagagagaatcgaacatgagaccttgaggaagagcacactaccggattccaagcttataccactacg 2750686  T
Q  207 ccaacccaagtgggttca 224  Q
    |||||  |||||||||||    
T  2750687 ccaacagaagtgggttca 2750704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 220
Target Start/End: Original strand, 12086091 - 12086203
Alignment:
Q  108 aagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggc 207  Q
    |||||||||||||| ||| | |||||| || | || |  ||| ||||| ||||| |||||||| |||||| | |||  ||||||||  ||||||||||||    
T  12086091 aagaagctaaattagcccacctaaattagcaccggagggaatcgaacccgagaccttgaggaggagcacacttccaggtcccaagccaataccaccaggc 12086190  T
Q  208 caacccaagtggg 220  Q
    ||||  |||||||    
T  12086191 caacttaagtggg 12086203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 177
Target Start/End: Complemental strand, 31681130 - 31681094
Alignment:
Q  141 ggggaaaattgaacctgagactttgaggagaagcaca 177  Q
    ||||| ||| |||||||||||||||||||||||||||    
T  31681130 ggggagaatcgaacctgagactttgaggagaagcaca 31681094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 3e-20; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 107 - 225
Target Start/End: Complemental strand, 21418585 - 21418467
Alignment:
Q  107 gaagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccagg 206  Q
    ||||||||||||||| ||| | | ||||||| || |||| ||| |||| |||||| | |||||| |||||| |||||| ||||||||  |||||||||||    
T  21418585 gaagaagctaaattagcccaccttaattggcactagggagaatcgaacttgagacatggaggaggagcacactcccaagtcccaagccaataccaccagg 21418486  T
Q  207 ccaacccaagtgggttcac 225  Q
    ||||||||| |||||||||    
T  21418485 ccaacccaactgggttcac 21418467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 107 - 222
Target Start/End: Original strand, 12188264 - 12188379
Alignment:
Q  107 gaagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccagg 206  Q
    |||||||||||| |||||| || |||||||| || | || ||| |||| ||| || |||||||| |||||| |||||  ||||||||  ||||||| |||    
T  12188264 gaagaagctaaactaaccccctcaaattggcactagagagaatcgaacttgaaaccttgaggaggagcacactcccaggtcccaagccaataccactagg 12188363  T
Q  207 ccaacccaagtgggtt 222  Q
    ||||||||||||||||    
T  12188364 ccaacccaagtgggtt 12188379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 108 - 222
Target Start/End: Original strand, 15951264 - 15951378
Alignment:
Q  108 aagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggc 207  Q
    ||||||||||| |||||| || |||||||  |  | || |||||||| |||||| |||||||| |||||| ||||||||| ||||| |||||||| |||     
T  15951264 aagaagctaaactaaccctctcaaattggtaccagagagaattgaacatgagaccttgaggaggagcacactcccaaatctcaagcttataccacaagga 15951363  T
Q  208 caacccaagtgggtt 222  Q
    |||||||| ||||||    
T  15951364 caacccaactgggtt 15951378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 130 - 222
Target Start/End: Complemental strand, 11423658 - 11423566
Alignment:
Q  130 aaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggtt 222  Q
    |||||| | |||| |||||| ||||||||||| | ||||||||||| | ||||||||||||||   |||||||||| ||| |||||| |||||    
T  11423658 aaattgacactggagaaaatcgaacctgagacctcgaggagaagcatactcccaaatcccaagtcaataccaccagaccagcccaagcgggtt 11423566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 110 - 222
Target Start/End: Complemental strand, 30127512 - 30127400
Alignment:
Q  110 gaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggcca 209  Q
    |||||||||||||||  | ||||||||| | ||  | ||| ||||||||||| | || ||| |||||| ||||| | |||||||  |||||||||| |||    
T  30127512 gaagctaaattaacctacctaaattggcaccggaaagaatcgaacctgagacctcgaagaggagcacactcccagaccccaagccaataccaccagacca 30127413  T
Q  210 acccaagtgggtt 222  Q
    |||||||||||||    
T  30127412 acccaagtgggtt 30127400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 222
Target Start/End: Complemental strand, 33549175 - 33549104
Alignment:
Q  151 gaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggtt 222  Q
    ||||||||||| | |||||| |||||| |||||  ||||||||  |||||||||| ||||||||||||||||    
T  33549175 gaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccagaccaacccaagtgggtt 33549104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 151 - 218
Target Start/End: Original strand, 10338179 - 10338246
Alignment:
Q  151 gaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtg 218  Q
    ||||||||||| |||||||| |||||| ||| |  ||||||||  ||||||||| |||||||||||||    
T  10338179 gaacctgagaccttgaggaggagcacactcctaggtcccaagccaataccaccatgccaacccaagtg 10338246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 151 - 202
Target Start/End: Complemental strand, 20213112 - 20213061
Alignment:
Q  151 gaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccac 202  Q
    ||||||||||| |||||||| |||||| |||||  |||||||||||||||||    
T  20213112 gaacctgagacattgaggaggagcacactcccaggtcccaagcgtataccac 20213061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 151 - 202
Target Start/End: Complemental strand, 22107135 - 22107084
Alignment:
Q  151 gaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccac 202  Q
    ||||||||||| |||||||| |||||| |||||  |||||||||||||||||    
T  22107135 gaacctgagacattgaggaggagcacactcccaggtcccaagcgtataccac 22107084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 177
Target Start/End: Original strand, 6519135 - 6519201
Alignment:
Q  111 aagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcaca 177  Q
    ||||||||||||||| ||||||||||||| || || ||| |||||| |||| ||| | |||||||||    
T  6519135 aagctaaattaacccacttaaattggcgccggagataatcgaacctaagaccttgtgaagaagcaca 6519201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 218
Target Start/End: Original strand, 6776617 - 6776679
Alignment:
Q  156 tgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtg 218  Q
    |||||| | |||||| ||||||  |||| |||||||||  |||||||||||||||||||||||    
T  6776617 tgagacatcgaggaggagcacacccccagatcccaagccaataccaccaggccaacccaagtg 6776679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 222
Target Start/End: Original strand, 12234469 - 12234583
Alignment:
Q  108 aagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggc 207  Q
    |||||||||||||| |||   ||||||| | |||| || ||| ||||||||||| | |||  | |||||| |||||  |||||||   ||||||||||||    
T  12234469 aagaagctaaattatcccatctaaattgacactggagagaatcgaacctgagacctcgagagggagcacactcccaggtcccaagtcaataccaccaggc 12234568  T
Q  208 caacccaagtgggtt 222  Q
    ||||| |||||||||    
T  12234569 caacctaagtgggtt 12234583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 222
Target Start/End: Original strand, 31622997 - 31623067
Alignment:
Q  152 aacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggtt 222  Q
    |||||||||| | |||||| |||||| |||||  ||||||||  |||||||| | ||||||||||||||||    
T  31622997 aacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccggaccaacccaagtgggtt 31623067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 6758448 - 6758497
Alignment:
Q  172 agcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggt 221  Q
    |||||| |||||||||| ||||  |||||||||||||||| |||||||||    
T  6758448 agcacactcccaaatcctaagccaataccaccaggccaacacaagtgggt 6758497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 222
Target Start/End: Original strand, 22995107 - 22995187
Alignment:
Q  142 gggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggtt 222  Q
    |||||||| ||||| |||||||||||||||| |||| || ||| |  ||||   |||||||||| ||||| ||||||||||    
T  22995107 gggaaaatcgaaccagagactttgaggagaaacacactcacaagtttcaagtcaataccaccagaccaactcaagtgggtt 22995187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 222
Target Start/End: Complemental strand, 23793293 - 23793213
Alignment:
Q  142 gggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggtt 222  Q
    |||||||| ||||| |||||||||||||||| |||| || ||| |  ||||   |||||||||| ||||| ||||||||||    
T  23793293 gggaaaatcgaaccagagactttgaggagaaacacactcacaagtttcaagtcaataccaccagaccaactcaagtgggtt 23793213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 2e-18; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 107 - 222
Target Start/End: Original strand, 21549099 - 21549213
Alignment:
Q  107 gaagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccagg 206  Q
    |||||||||||| |||||| || |||||||| || | |||||| |||| ||||||||| ||||| |||||| |||||  ||||||||  ||||||| |||    
T  21549099 gaagaagctaaactaaccc-ctcaaattggcactagagaaaatcgaacttgagactttaaggaggagcacactcccaggtcccaagccaataccactagg 21549197  T
Q  207 ccaacccaagtgggtt 222  Q
    ||||||||||||||||    
T  21549198 ccaacccaagtgggtt 21549213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 130 - 224
Target Start/End: Complemental strand, 16457902 - 16457808
Alignment:
Q  130 aaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggttca 224  Q
    |||||||| | ||||| |||||||| |||||| |||||||| |||||| ||| |  ||||||||  ||||||||||||||||| |||||||||||    
T  16457902 aaattggcaccggggagaattgaacatgagaccttgaggaggagcacactccaaggtcccaagccaataccaccaggccaacctaagtgggttca 16457808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 151 - 222
Target Start/End: Complemental strand, 25627128 - 25627057
Alignment:
Q  151 gaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggtt 222  Q
    ||||||||||| |||||||| |||||| |||||| | ||||||  ||||||| |||||||||||||||||||    
T  25627128 gaacctgagaccttgaggaggagcacactcccaagttccaagccaataccactaggccaacccaagtgggtt 25627057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 222
Target Start/End: Original strand, 26078024 - 26078127
Alignment:
Q  119 ttaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtg 218  Q
    ||||||| || |||||||| || | || ||| ||||||||||| |||| |||||||| | |||||| |||||| |  ||||||| |||||||||||||||    
T  26078024 ttaaccccctcaaattggcactagagagaatcgaacctgagaccttgaagagaagcatactcccaagtcccaaaccaataccactaggccaacccaagtg 26078123  T
Q  219 ggtt 222  Q
    ||||    
T  26078124 ggtt 26078127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 147 - 222
Target Start/End: Original strand, 29692387 - 29692462
Alignment:
Q  147 aattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggtt 222  Q
    |||| ||||||||||||||||||| |||||| ||||| ||||||| |  |||||||||| ||||||||| ||||||    
T  29692387 aattaaacctgagactttgaggaggagcacactcccagatcccaatccaataccaccagaccaacccaaatgggtt 29692462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 21589359 - 21589287
Alignment:
Q  151 gaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggttc 223  Q
    ||||||||||| | |||||| |||| | |||||  ||||||||  ||||||||||||||||||||||||||||    
T  21589359 gaacctgagacatcgaggagtagcagactcccaggtcccaagccaataccaccaggccaacccaagtgggttc 21589287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 130 - 222
Target Start/End: Original strand, 30883182 - 30883274
Alignment:
Q  130 aaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggtt 222  Q
    |||||| | |||| || |||||||| |||||| |||||||| |||||| |||||  ||||||||  ||||||| || ||||||||||||||||    
T  30883182 aaattgacactggtgagaattgaacttgagaccttgaggaggagcacactcccaggtcccaagccaataccactagaccaacccaagtgggtt 30883274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 222
Target Start/End: Complemental strand, 19043572 - 19043458
Alignment:
Q  107 gaagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccagg 206  Q
    |||||||||||| |||||| || |||||||| || | ||  |||||||||||||||||||| || | |||| |||||| | |||||   ||| ||| |||    
T  19043572 gaagaagctaaactaaccc-ctcaaattggcactagagaggattgaacctgagactttgagaaggaacacactcccaagttccaagtcaatagcactagg 19043474  T
Q  207 ccaacccaagtgggtt 222  Q
    ||||||||||||||||    
T  19043473 ccaacccaagtgggtt 19043458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 223
Target Start/End: Complemental strand, 16773922 - 16773806
Alignment:
Q  107 gaagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccagg 206  Q
    ||||||||||||||| ||| | |||||||||    | || ||| ||||||||||| | |||||| |||||| |||||  |||||||   ||||||||||     
T  16773922 gaagaagctaaattagcccacctaaattggcatcagagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagtcaataccaccaga 16773823  T
Q  207 ccaacccaagtgggttc 223  Q
    ||||| |||||||||||    
T  16773822 ccaactcaagtgggttc 16773806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 107 - 222
Target Start/End: Complemental strand, 6844844 - 6844729
Alignment:
Q  107 gaagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccagg 206  Q
    |||||||||||| ||| || | ||||||||| |  | || ||| |||||| |||| | |||||| | |||| |||||||| |||||   |||||||| ||    
T  6844844 gaagaagctaaactaatccacctaaattggcacgagagataatcgaaccttagacctcgaggaggaacacactcccaaattccaagtcaataccacctgg 6844745  T
Q  207 ccaacccaagtgggtt 222  Q
    ||||||||||||||||    
T  6844744 ccaacccaagtgggtt 6844729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 107 - 222
Target Start/End: Original strand, 8278236 - 8278351
Alignment:
Q  107 gaagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccagg 206  Q
    ||||||||||||||| ||| | ||||| ||| | || || |||  ||| |||||  | |||||| |||||| |||||| ||||||||  |||||| |||     
T  8278236 gaagaagctaaattagcccacctaaatcggcaccggagataatcaaacttgagatctcgaggaggagcacactcccaagtcccaagccaataccatcaga 8278335  T
Q  207 ccaacccaagtgggtt 222  Q
    ||||||||||||||||    
T  8278336 ccaacccaagtgggtt 8278351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 107 - 222
Target Start/End: Original strand, 17028225 - 17028340
Alignment:
Q  107 gaagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccagg 206  Q
    ||||||||||||||| ||| | ||||||| | || | |  |||  |||||||||| |||||||| |||||| |||||| |||||| |  |||| || |||    
T  17028225 gaagaagctaaattagcccacctaaattgacactagagggaatcaaacctgagaccttgaggaggagcacactcccaagtcccaacccaatacaactagg 17028324  T
Q  207 ccaacccaagtgggtt 222  Q
     |||||||||||||||    
T  17028325 tcaacccaagtgggtt 17028340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 107 - 222
Target Start/End: Original strand, 22020823 - 22020938
Alignment:
Q  107 gaagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccagg 206  Q
    |||||| |||||||| ||| | ||||||  | |||| || ||| ||| |||||||||  ||||| |||||| ||||| |||||||||  ||||||| | |    
T  22020823 gaagaaactaaattagcccacctaaattaacactggagagaatcgaatctgagacttcaaggaggagcacactcccagatcccaagctaataccactatg 22020922  T
Q  207 ccaacccaagtgggtt 222  Q
    |||||||||| |||||    
T  22020923 ccaacccaagagggtt 22020938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 151 - 222
Target Start/End: Complemental strand, 22737153 - 22737082
Alignment:
Q  151 gaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggtt 222  Q
    ||||||||||| ||| |||| |||||| | |||| ||||||||  ||||||| || ||||||||||||||||    
T  22737153 gaacctgagacattggggaggagcacacttccaagtcccaagccaataccactagaccaacccaagtgggtt 22737082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 107 - 222
Target Start/End: Complemental strand, 29075896 - 29075781
Alignment:
Q  107 gaagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccagg 206  Q
    ||||||||||||||| |||   ||||||||| |  | || ||| |||| |||||  | |||||| |||||| ||||| |||||||||  ||||||| |||    
T  29075896 gaagaagctaaattagcccatctaaattggcaccagagagaatcgaacatgagatctcgaggaggagcacactcccagatcccaagccaataccactagg 29075797  T
Q  207 ccaacccaagtgggtt 222  Q
    | ||||||||||||||    
T  29075796 caaacccaagtgggtt 29075781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 107 - 222
Target Start/End: Original strand, 30109270 - 30109384
Alignment:
Q  107 gaagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccagg 206  Q
    ||||||||||||||| ||| | |||||| || | |||| || | ||||||||||| |  ||||| |||||| |||||  || |||||  ||||||||| |    
T  30109270 gaagaagctaaattagcccacctaaattagcaccgggggaa-tcgaacctgagacctcaaggaggagcacactcccaggtcacaagccaataccaccaag 30109368  T
Q  207 ccaacccaagtgggtt 222  Q
    ||||||||||||||||    
T  30109369 ccaacccaagtgggtt 30109384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 218
Target Start/End: Complemental strand, 16436695 - 16436622
Alignment:
Q  144 gaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtg 218  Q
    |||||| |||| |||||| |||||||| |||||| ||| || ||||||||  ||||||| |||||||||||||||    
T  16436695 gaaaatcgaacatgagaccttgaggaggagcacactcc-aagtcccaagccaataccactaggccaacccaagtg 16436622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 222
Target Start/End: Original strand, 40461619 - 40461689
Alignment:
Q  152 aacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggtt 222  Q
    |||||||||| ||||||||||||||| || ||| || ||||   ||||||||||  |||||||||||||||    
T  40461619 aacctgagaccttgaggagaagcacactctcaagtctcaagttaataccaccagatcaacccaagtgggtt 40461689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 191
Target Start/End: Complemental strand, 12877764 - 12877724
Alignment:
Q  151 gaacctgagactttgaggagaagcacaatcccaaatcccaa 191  Q
    ||||||||||| |||||||||| |||| |||||||||||||    
T  12877764 gaacctgagacattgaggagaaacacactcccaaatcccaa 12877724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 222
Target Start/End: Complemental strand, 34984918 - 34984806
Alignment:
Q  110 gaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggcca 209  Q
    |||||||||  ||||| || |||||||| |  | || ||| |||||| |||| |||||||| |||||| |||||  | ||||||  ||||||| || |||    
T  34984918 gaagctaaaccaaccccctcaaattggcaccagagagaatcgaacctaagaccttgaggaggagcacactcccaggttccaagccaataccactagacca 34984819  T
Q  210 acccaagtgggtt 222  Q
    |||||||||||||    
T  34984818 acccaagtgggtt 34984806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 1e-16; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 107 - 219
Target Start/End: Original strand, 7292759 - 7292871
Alignment:
Q  107 gaagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccagg 206  Q
    |||||||||||| |||||| || |||||||| || | || ||| |||||||||||||||||||| |||||| |||||  | ||||||  ||||||| ||     
T  7292759 gaagaagctaaactaaccccctcaaattggcactagagagaatcgaacctgagactttgaggaggagcacactcccaggttccaagccaataccactaga 7292858  T
Q  207 ccaacccaagtgg 219  Q
    |||||||||||||    
T  7292859 ccaacccaagtgg 7292871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 107 - 222
Target Start/End: Complemental strand, 4249292 - 4249177
Alignment:
Q  107 gaagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccagg 206  Q
    |||||||||||| |||||| || |||||||| |  | || |||  |||||||||| |||||||| |||||| ||| ||||||||||| |||||||| |||    
T  4249292 gaagaagctaaactaaccccctcaaattggcaccagagagaatcaaacctgagaccttgaggaggagcacactccaaaatcccaagcctataccactagg 4249193  T
Q  207 ccaacccaagtgggtt 222  Q
    |||| | |||||||||    
T  4249192 ccaagcgaagtgggtt 4249177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 111 - 222
Target Start/End: Original strand, 19238542 - 19238653
Alignment:
Q  111 aagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaa 210  Q
    ||||||||||| ||| |  |||||||  | ||||| ||| ||||| ||||| | |||||| |||||| |||||| ||||||||  |||||||||||||||    
T  19238542 aagctaaattagcccacccaaattggtaccggggagaatcgaacccgagacctcgaggaggagcacactcccaagtcccaagccaataccaccaggccaa 19238641  T
Q  211 cccaagtgggtt 222  Q
    ||||||||||||    
T  19238642 cccaagtgggtt 19238653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 107 - 222
Target Start/End: Original strand, 37109312 - 37109427
Alignment:
Q  107 gaagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccagg 206  Q
    |||||| ||||| |||||| || |||||||| |  | || ||| ||||||||||| |||||||| |||||| |||||  ||||||||  ||||||| |||    
T  37109312 gaagaaactaaactaaccccctcaaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactagg 37109411  T
Q  207 ccaacccaagtgggtt 222  Q
    ||||||||||||||||    
T  37109412 ccaacccaagtgggtt 37109427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 111 - 222
Target Start/End: Complemental strand, 39509181 - 39509070
Alignment:
Q  111 aagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaa 210  Q
    ||||||||||||||| | ||||||| | ||||||| ||| ||||||||||| | |||||| |||||| ||||| |||||||||   |||||  || ||||    
T  39509181 aagctaaattaacccacctaaattgccactggggagaatcgaacctgagacctcgaggaggagcacactcccagatcccaagccattaccatgagaccaa 39509082  T
Q  211 cccaagtgggtt 222  Q
    ||||||||||||    
T  39509081 cccaagtgggtt 39509070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 108 - 222
Target Start/End: Original strand, 19680750 - 19680864
Alignment:
Q  108 aagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggc 207  Q
    ||||||||||| |||||  ||||||||||| |  | || ||| |||||| |||| |||||||  |||||| |||||| ||||||||| ||||||| ||||    
T  19680750 aagaagctaaactaacctccttaaattggcaccagagagaatcgaacctaagaccttgaggaagagcacactcccaagtcccaagcgaataccactaggc 19680849  T
Q  208 caacccaagtgggtt 222  Q
    ||| |||||||||||    
T  19680850 caatccaagtgggtt 19680864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 151 - 222
Target Start/End: Complemental strand, 31826680 - 31826609
Alignment:
Q  151 gaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggtt 222  Q
    |||| |||||| |||||||| |||||| || |||||||||||| |||||||| ||| |||||||||||||||    
T  31826680 gaacttgagaccttgaggaggagcacactcgcaaatcccaagcctataccactagggcaacccaagtgggtt 31826609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 108 - 222
Target Start/End: Original strand, 51250484 - 51250598
Alignment:
Q  108 aagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggc 207  Q
    |||||||||||||| ||| |  |||||||| | || |  ||| |||| |||||  |||||| | |||||| ||||| |||||||||  ||||||||||||    
T  51250484 aagaagctaaattagcccacccaaattggcaccggagggaatcgaacttgagatcttgaggcggagcacactcccagatcccaagccaataccaccaggc 51250583  T
Q  208 caacccaagtgggtt 222  Q
    |||||||||||||||    
T  51250584 caacccaagtgggtt 51250598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 151 - 224
Target Start/End: Original strand, 8030209 - 8030282
Alignment:
Q  151 gaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggttca 224  Q
    |||| |||||| |||||||| |||||| |||||| |||||||| |||||||| ||| ||| |||||||||||||    
T  8030209 gaacttgagaccttgaggaggagcacactcccaagtcccaagcctataccactagggcaatccaagtgggttca 8030282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 49576899 - 49576963
Alignment:
Q  151 gaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaa 215  Q
    ||||||||||| |||||||| |||||| |||||| ||| ||||  ||||||||||||||||||||    
T  49576899 gaacctgagaccttgaggaggagcacactcccaagtccaaagccaataccaccaggccaacccaa 49576963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 222
Target Start/End: Original strand, 37720175 - 37720290
Alignment:
Q  107 gaagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccagg 206  Q
    ||||||||||||||| ||| | |||||||   |  |||| ||| ||||||| ||| ||||||||  ||||| |||||  ||||||||  ||| |||||||    
T  37720175 gaagaagctaaattagcccacctaaattgatccctgggagaatcgaacctgggaccttgaggaggggcacactcccaggtcccaagccaataacaccagg 37720274  T
Q  207 ccaacccaagtgggtt 222  Q
    ||||||||||||||||    
T  37720275 ccaacccaagtgggtt 37720290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 222
Target Start/End: Original strand, 55427165 - 55427276
Alignment:
Q  111 aagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaa 210  Q
    ||||||||||| ||| |  |||||||| | | ||| ||| ||||||||||| | ||| || |||| | |||||  ||||||||  |||||||||||||||    
T  55427165 aagctaaattagcccacccaaattggcaccgcggagaatcgaacctgagacctcgagcaggagcagactcccaggtcccaagccaataccaccaggccaa 55427264  T
Q  211 cccaagtgggtt 222  Q
    ||||||||||||    
T  55427265 cccaagtgggtt 55427276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 192
Target Start/End: Original strand, 14451711 - 14451792
Alignment:
Q  111 aagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaag 192  Q
    ||||||||||| ||| ||||||||| | | ||| |||||||||||| |||| |||||||| |||||| || || ||||||||    
T  14451711 aagctaaattatcccacttaaattgacaccgggaaaaattgaacctaagaccttgaggaggagcacactctcatatcccaag 14451792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 191
Target Start/End: Original strand, 30938180 - 30938264
Alignment:
Q  107 gaagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaa 191  Q
    |||||||||||| |||||| | |||||||||  |||||| ||| ||||||||||| | |||||| |||||| ||| | |||||||    
T  30938180 gaagaagctaaactaacccacctaaattggcattggggagaatcgaacctgagacctcgaggaggagcacactccaagatcccaa 30938264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 222
Target Start/End: Original strand, 37274420 - 37274536
Alignment:
Q  107 gaagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgta-taccaccag 205  Q
    ||||||||||||||| ||| |||||||| || |  | || ||| |||||| |||| |||||||| |||||| |||||  ||||||||  | ||| || ||    
T  37274420 gaagaagctaaattagcccacttaaattagcaccagagagaatcgaacctaagaccttgaggaggagcacactcccaggtcccaagccaattacgactag 37274519  T
Q  206 gccaacccaagtgggtt 222  Q
    |||||||||||||||||    
T  37274520 gccaacccaagtgggtt 37274536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 207
Target Start/End: Complemental strand, 38869883 - 38869783
Alignment:
Q  107 gaagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccagg 206  Q
    |||||||||||| |||||| || |||||||| |  | |  ||| ||||||||||| |||||||| |||||| ||||| |||||||||  ||||||| |||    
T  38869883 gaagaagctaaactaaccccctcaaattggcaccagagggaatcgaacctgagaccttgaggaggagcacactcccagatcccaagccaataccactagg 38869784  T
Q  207 c 207  Q
    |    
T  38869783 c 38869783  T

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Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 220
Target Start/End: Original strand, 40283992 - 40284060
Alignment:
Q  152 aacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtggg 220  Q
    ||||| |||| ||||||||| ||||| |||||| ||||||||  |||||| || |||||||||||||||    
T  40283992 aaccttagaccttgaggagatgcacactcccaagtcccaagccaataccatcatgccaacccaagtggg 40284060  T

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Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 108 - 222
Target Start/End: Original strand, 2184994 - 2185109
Alignment:
Q  108 aagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggc 207  Q
    ||||||||||| |||||| || ||||||||   || || ||| ||||||||||||||||| || |||||| |||||  | ||||||   |||||| ||||    
T  2184994 aagaagctaaactaaccccctcaaattggcatcggagagaatcgaacctgagactttgagaaggagcacactcccaggttccaagccattaccactaggc 2185093  T
Q  208 caaccc-aagtgggtt 222  Q
    |||||| |||||||||    
T  2185094 caacccgaagtgggtt 2185109  T

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Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 107 - 222
Target Start/End: Original strand, 7949415 - 7949530
Alignment:
Q  107 gaagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccagg 206  Q
    ||||||||||||||| ||| | ||||||| | |  | || ||| ||||||||||| |||||||| |||||| ||| |  ||||||||  ||||| | |||    
T  7949415 gaagaagctaaattagcccacctaaattgacaccagagagaatcgaacctgagaccttgaggaggagcacactccgaggtcccaagccaataccgctagg 7949514  T
Q  207 ccaacccaagtgggtt 222  Q
    ||| ||||||||||||    
T  7949515 ccagcccaagtgggtt 7949530  T

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Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 151 - 222
Target Start/End: Original strand, 9241030 - 9241101
Alignment:
Q  151 gaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggtt 222  Q
    |||||| |||| | ||| || |||||| | ||| |||||||||  |||||||||||||||||||||||||||    
T  9241030 gaacctcagacctcgagcaggagcacactaccagatcccaagccaataccaccaggccaacccaagtgggtt 9241101  T

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Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 222
Target Start/End: Original strand, 31759667 - 31759734
Alignment:
Q  155 ctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggtt 222  Q
    ||||||| |||||||| |||||| |||||| ||||||||  ||||||| ||  |||||||||||||||    
T  31759667 ctgagaccttgaggaggagcacactcccaagtcccaagccaataccactagatcaacccaagtgggtt 31759734  T

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Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 193
Target Start/End: Complemental strand, 23378071 - 23377985
Alignment:
Q  107 gaagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagc 193  Q
    |||||||||||| || ||| || |||||||| || | || ||| ||||||||||| |||||||| |||||| |||||  ||||||||    
T  23378071 gaagaagctaaactagccccctcaaattggcactagagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagc 23377985  T

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Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 218
Target Start/End: Original strand, 37980110 - 37980219
Alignment:
Q  108 aagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggc 207  Q
    ||||||| ||| || |||||| |||||| | ||||||| ||| ||||||||||| |||| ||| |||||| ||| |  ||||||||  | | ||||||||    
T  37980110 aagaagccaaactagcccgctgaaattgacactggggagaatcgaacctgagaccttga-gaggagcacactccaaggtcccaagccaacatcaccaggc 37980208  T
Q  208 caacccaagtg 218  Q
    |||||||||||    
T  37980209 caacccaagtg 37980219  T

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Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 222
Target Start/End: Complemental strand, 46295211 - 46295097
Alignment:
Q  108 aagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggc 207  Q
    ||||||||||| || ||| |  |||||||| | ||||| ||| ||||||||||| |||||||| |||||| ||| |  ||||||||  | || ||||| |    
T  46295211 aagaagctaaactagcccacccaaattggcaccggggagaatcgaacctgagaccttgaggaggagcacactccaatgtcccaagccaacactaccagac 46295112  T
Q  208 caacccaagtgggtt 222  Q
    ||||| |||||||||    
T  46295111 caacctaagtgggtt 46295097  T

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Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 222
Target Start/End: Complemental strand, 51948574 - 51948480
Alignment:
Q  128 ttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggtt 222  Q
    |||||||| | |||| || ||||||||||||||| | ||||||  ||||| ||| | ||||||||   |||| |||||| |||||||||||||||    
T  51948574 ttaaattgacactggagagaattgaacctgagacctcgaggaggggcacactcctagatcccaagtcaatactaccaggacaacccaagtgggtt 51948480  T

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Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 222
Target Start/End: Original strand, 27965537 - 27965586
Alignment:
Q  173 gcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggtt 222  Q
    ||||| ||||| |||||||||  ||||||| |||||||||||||||||||    
T  27965537 gcacactcccagatcccaagccaataccactaggccaacccaagtgggtt 27965586  T

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Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 129 - 222
Target Start/End: Complemental strand, 47044809 - 47044717
Alignment:
Q  129 taaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggtt 222  Q
    ||||||| ||||||| | ||| ||||||||||| | |||||| |||| | || || ||||||||   ||||||||||||||| |||||||||||    
T  47044809 taaattgacgctggg-agaatcgaacctgagacctcgaggaggagcaaactctcagatcccaagtcaataccaccaggccaatccaagtgggtt 47044717  T

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Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 219
Target Start/End: Original strand, 41346968 - 41347036
Alignment:
Q  151 gaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgg 219  Q
    ||||||||||||| |||||| |||| | ||||| ||| ||| |  |||||| |||||||||||||||||    
T  41346968 gaacctgagacttcgaggaggagcatactcccagatctcaaaccaataccatcaggccaacccaagtgg 41347036  T

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Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 183
Target Start/End: Complemental strand, 43728470 - 43728434
Alignment:
Q  147 aattgaacctgagactttgaggagaagcacaatccca 183  Q
    |||||||||||||||||||||||| |||||| |||||    
T  43728470 aattgaacctgagactttgaggaggagcacactccca 43728434  T

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Target: scaffold0002 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 108 - 219
Target Start/End: Original strand, 94935 - 95044
Alignment:
Q  108 aagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggc 207  Q
    ||||||||||| ||||||  |||||||||| |  | || ||||||||||||||| |||||||| |||||| |||||  | ||||||  ||||||| ||||    
T  94935 aagaagctaaactaaccc--ttaaattggcaccagagataattgaacctgagaccttgaggaggagcacactcccaggttccaagccaataccactaggc 95032  T
Q  208 caacccaagtgg 219  Q
    ||||||||||||    
T  95033 caacccaagtgg 95044  T

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Target: scaffold0258 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 107 - 222
Target Start/End: Original strand, 15284 - 15399
Alignment:
Q  107 gaagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccagg 206  Q
    ||||||||||||||| ||| | |||||||||    | || ||| ||||||||||| | |||||| |||||| |||||  ||||||||  ||||||||||     
T  15284 gaagaagctaaattagcccacctaaattggcatccgagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccaga 15383  T
Q  207 ccaacccaagtgggtt 222  Q
    ||||||||||||||||    
T  15384 ccaacccaagtgggtt 15399  T

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Target: scaffold1367 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 845 - 910
Alignment:
Q  151 gaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaag 216  Q
    ||||||||||||| |||||| |||||| ||||| |||||||||  |||||||||||||| ||||||    
T  845 gaacctgagacttcgaggaggagcacattcccagatcccaagccaataccaccaggccaccccaag 910  T

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Target: scaffold0122 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 6924 - 6988
Alignment:
Q  151 gaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaa 215  Q
    |||||||||||||||||||| |||||| |||| | ||||||||  ||||||| ||||||||||||    
T  6924 gaacctgagactttgaggaggagcacactccccagtcccaagccaataccactaggccaacccaa 6988  T

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Target: scaffold0070 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 107 - 223
Target Start/End: Original strand, 42482 - 42597
Alignment:
Q  107 gaagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccagg 206  Q
    ||||||||||||||||||| ||||||||||| |    || ||| |||||||||||| ||||||| |||| | ||||| || |||||   ||||||| |||    
T  42482 gaagaagctaaattaaccc-cttaaattggcaccaaagagaatcgaacctgagactctgaggaggagcatactcccagattccaagtcaataccactagg 42580  T
Q  207 ccaacccaagtgggttc 223  Q
    ||||||||| |||||||    
T  42581 ccaacccaactgggttc 42597  T

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Target: scaffold0172 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 222
Target Start/End: Original strand, 15739 - 15853
Alignment:
Q  108 aagaagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggc 207  Q
    |||||||||||||| ||| |  |||||||| | | ||| |||  ||| |||||| |||||||| |||| | ||| |||||||||||  ||||||||||||    
T  15739 aagaagctaaattagcccacccaaattggcaccgcggagaatcaaacttgagaccttgaggaggagcatactccaaaatcccaagccaataccaccaggc 15838  T
Q  208 caacccaagtgggtt 222  Q
    ||||  |||||||||    
T  15839 caacttaagtgggtt 15853  T

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Target: scaffold0299 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 11599 - 11534
Alignment:
Q  151 gaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaag 216  Q
    ||||||||||| | |||||| |||||| ||||| |||||||||  |||||||||||||| ||||||    
T  11599 gaacctgagacctcgaggaggagcacactcccagatcccaagccaataccaccaggccatcccaag 11534  T

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Target: scaffold0291 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 223
Target Start/End: Original strand, 2463 - 2547
Alignment:
Q  139 ctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggttc 223  Q
    ||||||| ||| ||||||||||| |||||||| |||||| ||||| |||| || |  |||||||| | ||||||||| |||||||    
T  2463 ctggggagaatcgaacctgagaccttgaggaggagcacactcccagatccaaaaccaataccaccggaccaacccaaatgggttc 2547  T

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Target: scaffold0417 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 111 - 222
Target Start/End: Complemental strand, 10330 - 10219
Alignment:
Q  111 aagctaaattaacccgcttaaattggcgctggggaaaattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaa 210  Q
    ||||||||||| ||| |||||||||||  | | || |||  ||| | |||||| ||||||| || || ||||| |||||||||  ||| || ||||||||    
T  10330 aagctaaattagcccacttaaattggcatttgagagaatcaaacttaagacttcgaggagaggcgcactcccagatcccaagccaatatcatcaggccaa 10231  T
Q  211 cccaagtgggtt 222  Q
    ||||||||||||    
T  10230 cccaagtgggtt 10219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 151 - 218
Target Start/End: Original strand, 13051 - 13118
Alignment:
Q  151 gaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtg 218  Q
    ||||||||||| |||||||| |||||| ||||| ||| |||||  ||||||||| ||||||| |||||    
T  13051 gaacctgagaccttgaggaggagcacactcccagatctcaagccaataccaccaagccaaccgaagtg 13118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 147 - 222
Target Start/End: Original strand, 41634 - 41709
Alignment:
Q  147 aattgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggtt 222  Q
    ||||||||||||||| | |||||| |||| | || || ||| |||||  ||||||| |||||||||||||||||||    
T  41634 aattgaacctgagacctcgaggaggagcatactctcagatctcaagccaataccactaggccaacccaagtgggtt 41709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 222
Target Start/End: Complemental strand, 91197 - 91125
Alignment:
Q  150 tgaacctgagactttgaggagaagcacaatcccaaatcccaagcgtataccaccaggccaacccaagtgggtt 222  Q
    |||||||||||| || |||||||||||| | ||| || | || | |||||||| ||| |||||||||||||||    
T  91197 tgaacctgagaccttaaggagaagcacacttccagattcgaaacctataccactaggtcaacccaagtgggtt 91125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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