View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15311_low_42 (Length: 254)
Name: NF15311_low_42
Description: NF15311
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15311_low_42 |
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Alignment Details
Target: chr7 (Bit Score: 141; Significance: 5e-74; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 96 - 236
Target Start/End: Complemental strand, 43100090 - 43099950
Alignment:
| Q |
96 |
aaccttaatataataaactttctcacaagtcataccctaaccctctcttaaacgctttgtctttaacccaatggcaacatccagcaacgacaaaaagaac |
195 |
Q |
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| T |
43100090 |
aaccttaatataataaactttctcacaagtcataccctaaccctctcttaaacgctttgtctttaacccaatggcaacatccagcaacgacaaaaagaac |
43099991 |
T |
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| Q |
196 |
aacacctcctatccacctccacagaatccacccccgggcag |
236 |
Q |
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| T |
43099990 |
aacacctcctatccacctccacagaatccacccccgggcag |
43099950 |
T |
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Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 43100182 - 43100151
Alignment:
| Q |
1 |
atcaattaaaagaacacaataactgtggtacg |
32 |
Q |
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| T |
43100182 |
atcaattaaaagaacacaataactgtggtacg |
43100151 |
T |
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