View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15312_high_9 (Length: 214)
Name: NF15312_high_9
Description: NF15312
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15312_high_9 |
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Alignment Details
Target: chr3 (Bit Score: 184; Significance: 1e-100; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 184; E-Value: 1e-100
Query Start/End: Original strand, 10 - 197
Target Start/End: Complemental strand, 48210855 - 48210668
Alignment:
| Q |
10 |
catcatcatcatacaatttatattaaaaatagtacgattgtacttaaacgcaatacatccaatatccaaagtttaaaagaagacacaatacaaccacact |
109 |
Q |
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| T |
48210855 |
catcatcatcataaaatttatattaaaaatagtacgattgtacttaaacgcaatacatccaatatccaaagtttaaaagaagacacaatacaaccacact |
48210756 |
T |
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| Q |
110 |
aaaaataagaccacaatgcaattaaataaagaaaaaccaaagaacacataggagacacaatacaagtaagtaaaattcaagaacacat |
197 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48210755 |
aaaaataagaccacaatgcaattaaataaagaaaaaccaaagaacacataggagacacaatacaagtaagtaaaattcaagaacacat |
48210668 |
T |
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