View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15314_high_2 (Length: 280)
Name: NF15314_high_2
Description: NF15314
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15314_high_2 |
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Alignment Details
Target: chr3 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 42 - 266
Target Start/End: Original strand, 53298433 - 53298661
Alignment:
| Q |
42 |
attcccttttaaataggctttgagttgtaaatgggttgagtacctcacgtaatcttatttctaattgaaatatctttgcagtgataaaaattaataaatc |
141 |
Q |
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| T |
53298433 |
attccgttttaaataggctttgagttgtaaatgggttgagtacctcacgtaatcttatttctaattgaaatatctttgcagtgataaaaattaataaatc |
53298532 |
T |
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| Q |
142 |
aaataaatattcattagt----acccaccatttgaaaaacatgagatttgtgaacttttatttaaagcttgttgttgggtgtgcattttaggtcaatgta |
237 |
Q |
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| T |
53298533 |
aaataaatattcattagtacccacccaccatttgaaaaacatgagatttttttacttttatttaaagcttgttgtggggtgtgcattttaggtcaatgta |
53298632 |
T |
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| Q |
238 |
gtgctcatttaatttcgaaatatttcttc |
266 |
Q |
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| T |
53298633 |
gtgctcatttaatttcgaaatatttcttc |
53298661 |
T |
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