View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15314_high_3 (Length: 271)
Name: NF15314_high_3
Description: NF15314
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15314_high_3 |
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Alignment Details
Target: chr7 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 18 - 250
Target Start/End: Complemental strand, 43672375 - 43672143
Alignment:
| Q |
18 |
aagcatggtaggcatgaaccatgtctgaaccggatgaacccggttcggttaatccaaggttggaagatgaaccatcgttaaagtgcatggagagtgaaga |
117 |
Q |
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| T |
43672375 |
aagcatggtaggcatgaaccatgtctgaaccagatgaacccggttcggttaatccaaggttggaagatgaaccatcgttaaagtgcatggagagtgaaga |
43672276 |
T |
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| Q |
118 |
gtgtaatggataagagagaagaacgttgtaagatgttgtgtgggttttaaggtttaaggaagtgaagtggttgagaacaaagttagcggtgtcggagttg |
217 |
Q |
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| T |
43672275 |
gtgtaatggataagagagaagaacgttgtaagatgttgtgtgggttttaaggtttaaggaaatgaagtggttgagaacaaagttagcggtgtcggagttg |
43672176 |
T |
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| Q |
218 |
ggtttagttccggcgaggtgagggtgcatggtg |
250 |
Q |
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| T |
43672175 |
ggtttagttccggcgaggtgagggtgcatggtg |
43672143 |
T |
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