View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15315_high_16 (Length: 345)
Name: NF15315_high_16
Description: NF15315
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15315_high_16 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 322; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 322; E-Value: 0
Query Start/End: Original strand, 20 - 345
Target Start/End: Complemental strand, 25598214 - 25597889
Alignment:
| Q |
20 |
tgtaggtaaccaaatatactctaatgctctatttgagtacaggcttcttatgtgtttccctaaatggtatatctccgcttagaacggagctgataaaatt |
119 |
Q |
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| T |
25598214 |
tgtaggtaaccaaatatactctaatgctctatttgagtacaggcttcttatgtgtttccctaaatggtatatctccgcttagaacggagctgataaaatt |
25598115 |
T |
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| Q |
120 |
ctctacttcctctacggtcatttcacctgtaaatacagtgaatttccctttccgaggtttgtaggcaatcaataacttatctgatgatttataacctgtt |
219 |
Q |
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| T |
25598114 |
ctctacttcctctacggtcatttcacctgtaaatacagtgaatttccctttccgaggtttgtaggcaatcaataacttatctgatgatttataacctgtt |
25598015 |
T |
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| Q |
220 |
ttgtcaaatgcatttagaaaggattgttgctttgaagaatctaagagaccataggaaatggagtccctagagctgccgcttccatttggttttcttgaca |
319 |
Q |
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| T |
25598014 |
ttgtcaaatgcatttagaaaggattgttgctttgaagaatctaagagaccataggaaatggagtccttagagctgccgcttccatttggttttcttgaca |
25597915 |
T |
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| Q |
320 |
aggacttctgtgagacctgaaataac |
345 |
Q |
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| T |
25597914 |
aggacttctgtgagacctgaaataac |
25597889 |
T |
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