View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15315_low_15 (Length: 393)
Name: NF15315_low_15
Description: NF15315
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15315_low_15 |
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Alignment Details
Target: chr7 (Bit Score: 351; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 351; E-Value: 0
Query Start/End: Original strand, 21 - 379
Target Start/End: Original strand, 48450457 - 48450815
Alignment:
| Q |
21 |
tcacctatagatgacctagtagtctctcaaaacagcttagatgaaggaaaagataaggaacagaatcctcaaattcgactagcttatgacattgctgcct |
120 |
Q |
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| T |
48450457 |
tcacctatagatgacctagtagtctctcaaaacagcttagaggaaggaaaagataaggaacagaatcctcaaattcgactagcttatgacattgctgcct |
48450556 |
T |
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| Q |
121 |
cagctgcctcctatgttcaactgcgagctaagaaccttttgacccttgctgctaagtcacaacagagtaaaaatgaagattctagtggaagaaaggattc |
220 |
Q |
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| T |
48450557 |
cagctgcctcctatgttcaattgcgagctaagaaccttttgacccttgctgctaagtcacaacagagtaaaaatgaagattctagtggaagaaaggattc |
48450656 |
T |
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| Q |
221 |
tccggaacaggaagcagaaggcacttcacgtgattataaatcagaggttgcagcttatatggtggcgtcaaccgtgacttctgtggttgcatctggagag |
320 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48450657 |
tccggaacaggaagcagaaggcacttcacgtgattataaatcagaggttgcagcttatatggtggcgtcaaccgtgacttctgtggttgcatctggagag |
48450756 |
T |
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| Q |
321 |
agggaaaggcaggaagcagcgacaagccttcagtcacttcattcctcaccttgtgaatg |
379 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48450757 |
agggaaaggcaggaagcagcgacaagccttcagtcacttcattcctcaccttgtgaatg |
48450815 |
T |
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