View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15315_low_30 (Length: 253)
Name: NF15315_low_30
Description: NF15315
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15315_low_30 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 18 - 253
Target Start/End: Original strand, 31462652 - 31462887
Alignment:
| Q |
18 |
agagcacaataaccagagcagcaagaaagcaaccagcagcaatccttgcagtaagaatatttgtagaagcaagaatcaaagccattccccaaaatgatga |
117 |
Q |
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| T |
31462652 |
agagcacaataaccagagcagcaagaaagcaaccagcagcaatccttgcagtaagaatatttgtagaagcaagaatcaaagccattccccaaaatgatga |
31462751 |
T |
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| Q |
118 |
accaagatctagagaaaaaccaatcagagaaatggtaaatacaattgaaaagtgctcttatcaaactcaaatcatatgcttgcttttaaggttattcaag |
217 |
Q |
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| T |
31462752 |
accaagatctagaaaaaaaccaatcagagaaatggtaaatacaattgaaaagtgctcttatcaaactcaaatcatatgcttgcttttaaggttattcaag |
31462851 |
T |
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| Q |
218 |
gtttatggcattgacatatatataaacctcgttatt |
253 |
Q |
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| T |
31462852 |
gtttatagcattgacatatatataaacctcgttatt |
31462887 |
T |
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