View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15316_low_5 (Length: 350)

Name: NF15316_low_5
Description: NF15316
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15316_low_5
NF15316_low_5
[»] chr4 (51 HSPs)
chr4 (13-335)||(44302639-44302967)
chr4 (94-220)||(30683011-30683138)
chr4 (94-176)||(15446698-15446781)
chr4 (98-169)||(47667188-47667259)
chr4 (98-169)||(28103521-28103593)
chr4 (98-177)||(33377391-33377471)
chr4 (98-179)||(26393152-26393234)
chr4 (100-350)||(11094537-11094786)
chr4 (94-165)||(2310821-2310893)
chr4 (94-169)||(15317707-15317783)
chr4 (94-169)||(23202997-23203073)
chr4 (98-169)||(26202421-26202493)
chr4 (98-169)||(31711101-31711173)
chr4 (98-169)||(40146658-40146730)
chr4 (98-169)||(46796061-46796133)
chr4 (94-165)||(53401490-53401562)
chr4 (94-160)||(15445441-15445508)
chr4 (98-165)||(26791464-26791531)
chr4 (94-171)||(28370674-28370752)
chr4 (98-171)||(37560332-37560406)
chr4 (94-171)||(53400190-53400268)
chr4 (128-169)||(307840-307881)
chr4 (94-169)||(32508430-32508506)
chr4 (98-205)||(936225-936333)
chr4 (98-169)||(1273468-1273539)
chr4 (98-165)||(2309853-2309921)
chr4 (98-165)||(12396913-12396981)
chr4 (94-169)||(23202245-23202321)
chr4 (94-165)||(26428661-26428733)
chr4 (94-165)||(30672103-30672175)
chr4 (264-343)||(36604701-36604781)
chr4 (94-169)||(41690078-41690154)
chr4 (94-169)||(56001303-56001379)
chr4 (98-176)||(27408772-27408851)
chr4 (94-155)||(937147-937209)
chr4 (97-178)||(3217635-3217717)
chr4 (97-135)||(44664396-44664434)
chr4 (98-155)||(52881979-52882037)
chr4 (94-155)||(56000292-56000354)
chr4 (97-165)||(8516891-8516960)
chr4 (94-135)||(28189367-28189408)
chr4 (98-135)||(34457638-34457675)
chr4 (94-135)||(44655726-44655767)
chr4 (98-165)||(19049911-19049979)
chr4 (98-165)||(26428884-26428952)
chr4 (94-169)||(28509908-28509984)
chr4 (94-165)||(29833377-29833449)
chr4 (94-165)||(29834471-29834543)
chr4 (98-165)||(35050922-35050990)
chr4 (98-169)||(38553938-38554010)
chr4 (94-160)||(52880818-52880886)
[»] chr3 (83 HSPs)
chr3 (94-350)||(32979093-32979350)
chr3 (93-342)||(11219434-11219684)
chr3 (94-179)||(7820395-7820481)
chr3 (94-179)||(11220683-11220769)
chr3 (137-347)||(39133066-39133276)
chr3 (98-347)||(17349959-17350209)
chr3 (186-343)||(7483386-7483543)
chr3 (98-179)||(54653991-54654073)
chr3 (98-165)||(1301041-1301109)
chr3 (94-165)||(7822025-7822097)
chr3 (94-165)||(35633232-35633304)
chr3 (94-177)||(47855365-47855449)
chr3 (94-169)||(51214201-51214277)
chr3 (98-176)||(29536723-29536802)
chr3 (99-205)||(39287480-39287587)
chr3 (98-171)||(8372649-8372723)
chr3 (98-179)||(43101903-43101985)
chr3 (98-179)||(51825646-51825728)
chr3 (94-160)||(53347043-53347109)
chr3 (98-174)||(10987683-10987760)
chr3 (94-214)||(32974213-32974334)
chr3 (94-214)||(53047902-53048023)
chr3 (97-165)||(55443589-55443658)
chr3 (94-169)||(12105364-12105440)
chr3 (94-169)||(12106542-12106618)
chr3 (94-165)||(19579333-19579405)
chr3 (94-169)||(23886861-23886937)
chr3 (94-169)||(30431380-30431456)
chr3 (98-169)||(30838505-30838577)
chr3 (94-165)||(32973144-32973216)
chr3 (98-165)||(40502254-40502322)
chr3 (94-169)||(46987330-46987406)
chr3 (97-169)||(47766986-47767058)
chr3 (94-165)||(48035363-48035435)
chr3 (94-169)||(48252938-48253014)
chr3 (98-165)||(48825821-48825889)
chr3 (98-177)||(49122029-49122109)
chr3 (94-177)||(51401378-51401462)
chr3 (98-165)||(53049076-53049144)
chr3 (94-165)||(55442599-55442671)
chr3 (105-163)||(48034025-48034084)
chr3 (94-160)||(52293567-52293634)
chr3 (98-171)||(42632715-42632789)
chr3 (98-171)||(42633919-42633993)
chr3 (94-155)||(52292599-52292661)
chr3 (98-295)||(53808327-53808524)
chr3 (94-131)||(383046-383083)
chr3 (94-135)||(7583715-7583756)
chr3 (94-135)||(19283931-19283972)
chr3 (97-169)||(23886124-23886197)
chr3 (186-295)||(34902904-34903012)
chr3 (94-135)||(46988539-46988580)
chr3 (105-177)||(47806834-47806907)
chr3 (94-169)||(12105520-12105596)
chr3 (94-169)||(13041952-13042028)
chr3 (94-169)||(13050029-13050105)
chr3 (98-169)||(26798941-26799013)
chr3 (98-161)||(33563958-33564022)
chr3 (94-165)||(39288478-39288550)
chr3 (98-169)||(44384331-44384403)
chr3 (94-160)||(7583475-7583542)
chr3 (99-169)||(30432116-30432187)
chr3 (94-164)||(35835859-35835930)
chr3 (94-164)||(35892576-35892647)
chr3 (94-160)||(53342721-53342788)
chr3 (98-155)||(5417097-5417155)
chr3 (94-163)||(11483028-11483098)
chr3 (94-132)||(13997457-13997495)
chr3 (98-171)||(41386139-41386213)
chr3 (94-132)||(46988349-46988387)
chr3 (102-179)||(47808131-47808209)
chr3 (98-175)||(51400224-51400302)
chr3 (97-165)||(5416206-5416275)
chr3 (98-135)||(19283743-19283780)
chr3 (94-135)||(20486018-20486059)
chr3 (98-135)||(30838351-30838388)
chr3 (98-170)||(41387467-41387540)
chr3 (94-131)||(54109501-54109538)
chr3 (94-169)||(23886705-23886781)
chr3 (94-169)||(30431960-30432036)
chr3 (94-169)||(51213456-51213532)
chr3 (114-169)||(51214065-51214121)
chr3 (94-165)||(52705347-52705419)
[»] chr1 (76 HSPs)
chr1 (97-342)||(26056009-26056255)
chr1 (98-343)||(50678375-50678617)
chr1 (98-179)||(3978053-3978135)
chr1 (94-169)||(32823463-32823539)
chr1 (94-176)||(14390263-14390346)
chr1 (94-214)||(2236818-2236939)
chr1 (94-165)||(1873893-1873965)
chr1 (98-169)||(3979348-3979420)
chr1 (98-165)||(14312784-14312852)
chr1 (94-169)||(20171197-20171273)
chr1 (94-169)||(33941322-33941398)
chr1 (94-165)||(34532741-34532813)
chr1 (98-169)||(39193590-39193662)
chr1 (94-169)||(50679856-50679932)
chr1 (94-171)||(20953293-20953371)
chr1 (98-147)||(31860516-31860565)
chr1 (98-182)||(52741497-52741582)
chr1 (94-165)||(1898009-1898081)
chr1 (94-165)||(2238017-2238089)
chr1 (94-177)||(13641262-13641346)
chr1 (94-169)||(13642592-13642668)
chr1 (98-169)||(13930710-13930782)
chr1 (94-169)||(25866707-25866783)
chr1 (94-165)||(35683060-35683132)
chr1 (98-165)||(42244513-42244581)
chr1 (94-169)||(46280806-46280882)
chr1 (94-169)||(51760044-51760120)
chr1 (94-169)||(52370988-52371064)
chr1 (94-160)||(9123443-9123510)
chr1 (94-160)||(34531668-34531735)
chr1 (98-179)||(14071228-14071310)
chr1 (98-171)||(25785977-25786051)
chr1 (94-179)||(26054903-26054988)
chr1 (94-155)||(48974455-48974517)
chr1 (100-160)||(9119813-9119874)
chr1 (94-135)||(27114688-27114729)
chr1 (94-135)||(33850307-33850348)
chr1 (94-135)||(33943630-33943671)
chr1 (96-160)||(51424258-51424323)
chr1 (94-135)||(52371854-52371895)
chr1 (94-165)||(25035363-25035435)
chr1 (94-165)||(25040576-25040648)
chr1 (94-165)||(38458091-38458163)
chr1 (94-169)||(47511372-47511448)
chr1 (94-165)||(48935149-48935221)
chr1 (94-165)||(48973203-48973275)
chr1 (201-342)||(51218827-51218969)
chr1 (98-176)||(13929304-13929383)
chr1 (107-169)||(32823576-32823639)
chr1 (94-195)||(1061333-1061435)
chr1 (137-211)||(9592287-9592361)
chr1 (105-182)||(16217456-16217534)
chr1 (98-171)||(25787197-25787271)
chr1 (98-171)||(42248338-42248412)
chr1 (97-135)||(43190568-43190606)
chr1 (94-132)||(47511963-47512001)
chr1 (98-171)||(49139810-49139884)
chr1 (94-131)||(4388111-4388148)
chr1 (138-179)||(19466230-19466271)
chr1 (94-135)||(25865959-25866000)
chr1 (171-295)||(27689366-27689493)
chr1 (94-135)||(28309767-28309808)
chr1 (94-135)||(29001192-29001233)
chr1 (186-295)||(30551499-30551607)
chr1 (98-166)||(34653444-34653513)
chr1 (138-179)||(36511356-36511397)
chr1 (171-335)||(37624439-37624603)
chr1 (97-169)||(51760707-51760780)
chr1 (135-175)||(2971746-2971786)
chr1 (94-169)||(4387998-4388074)
chr1 (98-177)||(21277003-21277083)
chr1 (94-169)||(25866115-25866191)
chr1 (94-169)||(32824013-32824089)
chr1 (94-165)||(35684242-35684313)
chr1 (98-169)||(37694662-37694734)
chr1 (98-169)||(47512119-47512191)
[»] chr5 (49 HSPs)
chr5 (98-343)||(18693707-18693952)
chr5 (96-350)||(21387644-21387899)
chr5 (98-244)||(7345350-7345497)
chr5 (94-176)||(15613510-15613593)
chr5 (94-169)||(1982717-1982793)
chr5 (98-177)||(10085872-10085952)
chr5 (94-165)||(15509200-15509272)
chr5 (98-177)||(15614987-15615067)
chr5 (98-177)||(22812414-22812494)
chr5 (94-169)||(37371062-37371138)
chr5 (94-164)||(32521691-32521762)
chr5 (94-155)||(20988695-20988757)
chr5 (98-182)||(26404232-26404317)
chr5 (94-169)||(2472465-2472541)
chr5 (94-165)||(4568013-4568085)
chr5 (94-165)||(5062225-5062297)
chr5 (94-169)||(12938666-12938742)
chr5 (94-165)||(15153882-15153954)
chr5 (94-165)||(19050978-19051050)
chr5 (98-179)||(18677985-18678067)
chr5 (102-179)||(26403320-26403398)
chr5 (94-135)||(6914720-6914761)
chr5 (94-135)||(16802359-16802400)
chr5 (98-177)||(1273098-1273178)
chr5 (94-169)||(2472335-2472411)
chr5 (94-165)||(5061033-5061105)
chr5 (98-233)||(5382951-5383087)
chr5 (98-169)||(6914847-6914919)
chr5 (94-169)||(12937917-12937993)
chr5 (102-169)||(12947925-12947993)
chr5 (94-165)||(15510302-15510374)
chr5 (94-169)||(16802206-16802282)
chr5 (98-169)||(32780117-32780189)
chr5 (94-137)||(21306596-21306639)
chr5 (94-137)||(21314434-21314477)
chr5 (94-199)||(4566956-4567062)
chr5 (94-132)||(12937794-12937832)
chr5 (98-179)||(19523992-19524073)
chr5 (98-155)||(38394752-38394810)
chr5 (97-165)||(641698-641767)
chr5 (94-135)||(3076828-3076869)
chr5 (94-135)||(12952103-12952144)
chr5 (94-131)||(28236967-28237004)
chr5 (94-135)||(37380369-37380410)
chr5 (94-169)||(5820718-5820794)
chr5 (102-169)||(12933764-12933832)
chr5 (102-169)||(12936137-12936205)
chr5 (98-169)||(12952769-12952841)
chr5 (94-169)||(18695682-18695758)
[»] chr2 (56 HSPs)
chr2 (94-326)||(12852891-12853124)
chr2 (98-335)||(3528133-3528372)
chr2 (98-343)||(23177682-23177929)
chr2 (98-343)||(23588939-23589186)
chr2 (94-177)||(12854131-12854215)
chr2 (98-177)||(42027202-42027282)
chr2 (94-176)||(6706931-6707014)
chr2 (98-171)||(1625009-1625082)
chr2 (94-165)||(5564064-5564136)
chr2 (94-165)||(5565184-5565256)
chr2 (98-169)||(7038367-7038439)
chr2 (98-165)||(41313306-41313374)
chr2 (94-169)||(43015544-43015620)
chr2 (94-168)||(4628887-4628962)
chr2 (229-335)||(6708848-6708954)
chr2 (98-176)||(10368413-10368492)
chr2 (186-343)||(4512204-4512361)
chr2 (94-169)||(5435164-5435240)
chr2 (187-326)||(14714591-14714730)
chr2 (94-165)||(17179065-17179137)
chr2 (94-169)||(17859301-17859377)
chr2 (94-169)||(27264608-27264684)
chr2 (94-165)||(30202698-30202770)
chr2 (94-199)||(3665229-3665335)
chr2 (95-160)||(10477348-10477414)
chr2 (94-155)||(21541066-21541128)
chr2 (98-179)||(42028983-42029065)
chr2 (98-135)||(10477581-10477618)
chr2 (94-166)||(14482129-14482202)
chr2 (94-135)||(27990379-27990420)
chr2 (94-135)||(28076912-28076953)
chr2 (94-165)||(2305545-2305617)
chr2 (98-165)||(3666307-3666375)
chr2 (94-165)||(17179290-17179362)
chr2 (94-169)||(27262718-27262794)
chr2 (98-165)||(33837794-33837862)
chr2 (107-169)||(6209099-6209162)
chr2 (137-176)||(12958465-12958504)
chr2 (94-152)||(14573860-14573919)
chr2 (98-176)||(37867765-37867844)
chr2 (201-295)||(26205126-26205219)
chr2 (94-155)||(27657796-27657858)
chr2 (98-155)||(37869089-37869147)
chr2 (102-167)||(41795989-41796055)
chr2 (98-178)||(28109895-28109976)
chr2 (105-169)||(42368343-42368408)
chr2 (94-165)||(3254861-3254933)
chr2 (98-177)||(12959732-12959812)
chr2 (94-165)||(15268386-15268458)
chr2 (98-169)||(15808089-15808161)
chr2 (98-169)||(15816701-15816773)
chr2 (98-169)||(17858619-17858691)
chr2 (98-165)||(30202922-30202990)
chr2 (94-169)||(42246596-42246672)
chr2 (94-169)||(42772443-42772519)
chr2 (94-169)||(43019281-43019357)
[»] scaffold0051 (2 HSPs)
scaffold0051 (98-343)||(39762-40008)
scaffold0051 (98-211)||(22137-22250)
[»] chr8 (55 HSPs)
chr8 (98-326)||(37276121-37276350)
chr8 (94-169)||(3612618-3612694)
chr8 (186-347)||(44103151-44103314)
chr8 (97-169)||(19913500-19913573)
chr8 (203-350)||(45541599-45541741)
chr8 (94-169)||(24068335-24068411)
chr8 (94-169)||(29441621-29441697)
chr8 (98-177)||(37274896-37274976)
chr8 (94-165)||(45384245-45384317)
chr8 (94-179)||(6843760-6843846)
chr8 (98-171)||(16363845-16363919)
chr8 (186-343)||(21670162-21670319)
chr8 (98-171)||(38591040-38591114)
chr8 (94-171)||(45385827-45385905)
chr8 (99-171)||(14820203-14820276)
chr8 (94-169)||(3271165-3271241)
chr8 (98-169)||(4675761-4675833)
chr8 (94-169)||(4675913-4675989)
chr8 (94-169)||(21551927-21552003)
chr8 (94-169)||(21552973-21553049)
chr8 (98-216)||(117057-117176)
chr8 (98-204)||(38589830-38589936)
chr8 (230-343)||(13513562-13513675)
chr8 (230-343)||(13603095-13603208)
chr8 (97-169)||(24069481-24069554)
chr8 (98-254)||(36756073-36756230)
chr8 (94-135)||(40102226-40102267)
chr8 (98-174)||(41866903-41866980)
chr8 (94-165)||(6844612-6844684)
chr8 (94-169)||(7796842-7796918)
chr8 (94-169)||(7816123-7816199)
chr8 (94-169)||(15989009-15989085)
chr8 (98-169)||(15989153-15989225)
chr8 (94-138)||(24706279-24706323)
chr8 (94-169)||(30865160-30865236)
chr8 (137-177)||(36070227-36070267)
chr8 (102-169)||(37472416-37472484)
chr8 (94-169)||(40102973-40103049)
chr8 (94-165)||(41178709-41178781)
chr8 (98-177)||(3237427-3237506)
chr8 (107-169)||(21552084-21552147)
chr8 (107-169)||(21553130-21553193)
chr8 (94-168)||(21553744-21553819)
chr8 (137-176)||(29739671-29739710)
chr8 (94-155)||(7565335-7565397)
chr8 (98-171)||(31623915-31623989)
chr8 (98-171)||(37323357-37323431)
chr8 (94-155)||(24703214-24703275)
chr8 (98-135)||(39349509-39349546)
chr8 (137-174)||(41867946-41867983)
chr8 (102-182)||(4810146-4810226)
chr8 (94-165)||(8502088-8502160)
chr8 (98-169)||(15989305-15989377)
chr8 (98-177)||(35945464-35945544)
chr8 (202-254)||(36938795-36938847)
[»] scaffold0003 (2 HSPs)
scaffold0003 (98-211)||(48449-48563)
scaffold0003 (98-233)||(47079-47215)
[»] chr6 (31 HSPs)
chr6 (98-211)||(27438799-27438913)
chr6 (94-165)||(28225429-28225501)
chr6 (94-160)||(13173042-13173109)
chr6 (94-160)||(19368562-19368629)
chr6 (98-178)||(33802043-33802124)
chr6 (94-169)||(12203306-12203382)
chr6 (94-169)||(17916504-17916580)
chr6 (94-165)||(19367722-19367794)
chr6 (94-169)||(21749837-21749913)
chr6 (94-169)||(22298609-22298685)
chr6 (94-177)||(22299930-22300014)
chr6 (98-165)||(26581962-26582030)
chr6 (98-233)||(27440146-27440282)
chr6 (98-177)||(33807698-33807778)
chr6 (98-160)||(26584081-26584144)
chr6 (98-155)||(2138686-2138744)
chr6 (94-135)||(5999653-5999694)
chr6 (94-135)||(19655048-19655089)
chr6 (94-169)||(8224373-8224449)
chr6 (94-165)||(8447226-8447298)
chr6 (94-165)||(8456030-8456102)
chr6 (94-169)||(12202327-12202403)
chr6 (94-169)||(33328380-33328456)
chr6 (100-170)||(9927617-9927688)
chr6 (94-135)||(11104447-11104488)
chr6 (94-135)||(12202202-12202243)
chr6 (94-135)||(17915714-17915755)
chr6 (97-165)||(28226457-28226526)
chr6 (97-169)||(31738371-31738444)
chr6 (98-179)||(34084159-34084239)
chr6 (94-169)||(21749249-21749325)
[»] scaffold1974 (1 HSPs)
scaffold1974 (137-343)||(489-695)
[»] scaffold1878 (1 HSPs)
scaffold1878 (137-343)||(579-785)
[»] chr7 (68 HSPs)
chr7 (94-171)||(18801220-18801298)
chr7 (94-177)||(43935190-43935274)
chr7 (94-171)||(19848867-19848945)
chr7 (94-165)||(48755587-48755659)
chr7 (98-155)||(13446388-13446446)
chr7 (201-295)||(24494961-24495054)
chr7 (94-155)||(35480213-35480274)
chr7 (94-165)||(1884245-1884317)
chr7 (94-165)||(38001509-38001581)
chr7 (98-176)||(46458741-46458820)
chr7 (98-179)||(19279637-19279719)
chr7 (94-195)||(41616629-41616731)
chr7 (94-175)||(45089477-45089558)
chr7 (94-171)||(47163158-47163236)
chr7 (94-165)||(1885280-1885352)
chr7 (98-169)||(19278362-19278434)
chr7 (94-169)||(29754721-29754797)
chr7 (94-165)||(34557402-34557474)
chr7 (94-165)||(36673875-36673947)
chr7 (94-177)||(36702782-36702866)
chr7 (94-169)||(37373539-37373615)
chr7 (94-209)||(41126244-41126360)
chr7 (94-169)||(43704613-43704689)
chr7 (98-169)||(47810174-47810246)
chr7 (98-176)||(25153667-25153746)
chr7 (98-160)||(33341307-33341370)
chr7 (94-152)||(38778982-38779041)
chr7 (98-136)||(35088031-35088069)
chr7 (98-179)||(43936165-43936247)
chr7 (94-135)||(10338383-10338424)
chr7 (94-135)||(18668768-18668809)
chr7 (94-135)||(33228852-33228893)
chr7 (94-135)||(37725884-37725925)
chr7 (94-135)||(40501238-40501279)
chr7 (94-165)||(1904059-1904131)
chr7 (94-169)||(6772733-6772809)
chr7 (94-138)||(8394034-8394078)
chr7 (94-169)||(8439771-8439847)
chr7 (98-169)||(17288255-17288327)
chr7 (94-165)||(21171300-21171372)
chr7 (94-165)||(30224015-30224087)
chr7 (94-169)||(32610689-32610765)
chr7 (94-169)||(33229412-33229488)
chr7 (102-169)||(33459578-33459646)
chr7 (94-165)||(34558340-34558412)
chr7 (94-169)||(37375129-37375205)
chr7 (94-153)||(41618550-41618610)
chr7 (98-169)||(43007684-43007756)
chr7 (88-135)||(8439962-8440009)
chr7 (97-155)||(18670552-18670611)
chr7 (98-176)||(18802417-18802496)
chr7 (102-176)||(40926547-40926622)
chr7 (98-240)||(43930328-43930471)
chr7 (97-135)||(6773460-6773498)
chr7 (94-171)||(7347253-7347331)
chr7 (94-132)||(10338192-10338230)
chr7 (240-290)||(11501334-11501383)
chr7 (98-155)||(38408323-38408381)
chr7 (94-132)||(43705471-43705509)
chr7 (94-135)||(7345919-7345960)
chr7 (94-135)||(40501525-40501566)
chr7 (97-169)||(47810021-47810094)
chr7 (94-165)||(2903049-2903121)
chr7 (94-165)||(21171525-21171597)
chr7 (98-169)||(32610845-32610917)
chr7 (94-169)||(37374641-37374717)
chr7 (94-165)||(38002553-38002625)
chr7 (94-134)||(47809495-47809535)
[»] scaffold0290 (1 HSPs)
scaffold0290 (137-295)||(9388-9545)
[»] scaffold0038 (2 HSPs)
scaffold0038 (94-165)||(25927-25999)
scaffold0038 (97-165)||(26955-27024)
[»] scaffold0155 (1 HSPs)
scaffold0155 (94-160)||(5174-5241)
[»] scaffold0630 (1 HSPs)
scaffold0630 (94-165)||(3091-3163)
[»] scaffold0178 (1 HSPs)
scaffold0178 (94-169)||(2300-2376)
[»] scaffold0177 (1 HSPs)
scaffold0177 (94-165)||(1760-1832)
[»] scaffold1827 (1 HSPs)
scaffold1827 (94-165)||(1098-1169)
[»] scaffold0013 (1 HSPs)
scaffold0013 (98-176)||(96169-96248)
[»] scaffold0369 (1 HSPs)
scaffold0369 (98-171)||(12919-12993)
[»] scaffold0084 (1 HSPs)
scaffold0084 (103-347)||(13061-13306)
[»] scaffold0064 (1 HSPs)
scaffold0064 (98-165)||(20621-20689)
[»] scaffold0025 (1 HSPs)
scaffold0025 (98-177)||(56727-56807)
[»] scaffold0007 (1 HSPs)
scaffold0007 (98-169)||(28141-28213)


Alignment Details
Target: chr4 (Bit Score: 173; Significance: 6e-93; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 13 - 335
Target Start/End: Original strand, 44302639 - 44302967
Alignment:
Q  13 aagaatatatgaaaaatcagacataattgacaatgactatttattttaagaagagtgttgtggaaacttgtttgttac----atg-atgctttggtccct 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||  || | |     ||  ||||||||||||||    
T  44302639 aagaatatatgaaaaatcagacataattgacaatgactatttattttaagaagagtgctctggaaactttattttaaggcttatacatgctttggtccct 44302738  T
Q  108 taactaatttttgaattttattttggtc-tctaactataaagtgtctcactttgatcccataaattttctgtcattatttcttttgatcatcttcgttaa 206  Q
    |||||||||||||||||| || |||||| |||||||||||||||||||| ||||||||||||||||||||| |||||  ||||||| || ||| |||||     
T  44302739 taactaatttttgaatttcatattggtcatctaactataaagtgtctcaatttgatcccataaattttctgccattacctcttttggtcctctccgttag 44302838  T
Q  207 tttttaacattaaaagactaaagtgaactatatttaaaagtggttcactgtagaccgtattaattttctttaattttaaccatttgattgatt-tttaaa 305  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||  ||||||||||||| ||| ||||||||||||||||||||||||| ||||||    
T  44302839 tttttaacattaaaagactaaggtgaactatatttaaaggtggttcaccatagaccgtattaaattt-tttaattttaaccatttgattgattctttaaa 44302937  T
Q  306 agatgacggttgaattatgtatggtatatt 335  Q
    ||||||  ||||||||||||| | ||||||    
T  44302938 agatgattgttgaattatgtaggatatatt 44302967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 94 - 220
Target Start/End: Complemental strand, 30683138 - 30683011
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctct-aactataaagtgtctcactttgatcccataaattttctgtcattatttcttttg 192  Q
    ||||||||||||||||| | |||||||| ||| ||||||||| || ||||||||||||||||| |||| |||||||||| ||| | | ||| ||||||||    
T  30683138 atgctttggtcccttaatttatttttgattttcattttggtcccttaactataaagtgtctcaatttggtcccataaatcttcggccgttaattcttttg 30683039  T
Q  193 atcatcttcgttaatttttaacattaaa 220  Q
     || ||| ||||| ||||||||| ||||    
T  30683038 gtcttctccgttagtttttaacaataaa 30683011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 94 - 176
Target Start/End: Complemental strand, 15446781 - 15446698
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtc-tctaactataaagtgtctcactttgatcccataaattttct 176  Q
    ||||||||||||||||||| ||||||| |||| ||||||||| ||||| |||||||||| ||| |||| |||||||||||||||    
T  15446781 atgctttggtcccttaacttatttttggatttcattttggtcatctaattataaagtgtttcaatttggtcccataaattttct 15446698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 98 - 169
Target Start/End: Original strand, 47667188 - 47667259
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctctaactataaagtgtctcactttgatcccataa 169  Q
    |||||||| |||||| |||||||  ||||||||||||||||||||||||||||||||| |||| || |||||    
T  47667188 tttggtcctttaacttatttttggtttttattttggtctctaactataaagtgtctcaatttggtctcataa 47667259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 28103593 - 28103521
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||||| ||||||| |||| ||||||||| | |||||||||||||||||| |||| ||||||||    
T  28103593 tttggtcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataa 28103521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 177
Target Start/End: Complemental strand, 33377471 - 33377391
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataaattttctg 177  Q
    ||||||||||||||| |||||||| ||| | ||||||| | |||||||||||||||||| |||| |||||||||| |||||    
T  33377471 tttggtcccttaacttatttttgattttcaatttggtcccctaactataaagtgtctcaatttggtcccataaatcttctg 33377391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 98 - 179
Target Start/End: Complemental strand, 26393234 - 26393152
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtc-tctaactataaagtgtctcactttgatcccataaattttctgtc 179  Q
    ||||||||||||||| |||||| | |||||||||| || | |||||||||||||||||| |||| |||||||| | |||||||    
T  26393234 tttggtcccttaacttattttttatttttattttgatcctttaactataaagtgtctcaatttggtcccataactcttctgtc 26393152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 100 - 350
Target Start/End: Original strand, 11094537 - 11094786
Alignment:
Q  100 tggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataaattttctgtcattatttcttttgatcatc 198  Q
    |||||| |||| | |||||||  ||||| ||||||||| |||||||||||||||| | |||| ||| |||||||||||| | ||   | ||||| || ||    
T  11094537 tggtcctttaatttatttttggtttttactttggtctcctaactataaagtgtcttaatttggtcctataaattttctgccgtttactgttttggtcctc 11094636  T
Q  199 ttcgttaatttttaacattaaaagactaaagtgaactatatttaaaagtggttcactgtagaccgtattaattttctttaattttaaccatttgattgat 298  Q
    ||||||| |||||||||| ||| | |||| ||  || || |||||| |||||||||  |||||| |||||| ||| || ||| |||||| | |||||  |    
T  11094637 ttcgttagtttttaacatcaaatgtctaaggt--accatgtttaaatgtggttcaccatagaccttattaaattt-ttaaatattaaccttgtgattttt 11094733  T
Q  299 t-tttaaaagatgacggttgaattatgtatggtatattatactttattgtaaa 350  Q
    | ||||||||| ||  |||| || ||||| ||| |||| || |||||||||||    
T  11094734 tctttaaaagaggattgttggatcatgtaaggtctattgtattttattgtaaa 11094786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 94 - 165
Target Start/End: Complemental strand, 2310893 - 2310821
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatccc 165  Q
    ||||||||||||||||||| ||||| |||||| |||||||| | ||||||||||| ||||||| |||| ||||    
T  2310893 atgctttggtcccttaacttattttcgaatttcattttggtcccctaactataaaatgtctcaatttggtccc 2310821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 15317707 - 15317783
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||||||||| |||||||||||| ||||||||| | ||||| |||| ||||||| |||| | ||||||    
T  15317707 atgctttggtcccttaacttatttttgaatttcattttggtcccttaactttaaactgtctcaatttgtttccataa 15317783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 23203073 - 23202997
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||||||||| |||||||||||| ||||||||| | ||||| ||||  |||||| |||| ||||||||    
T  23203073 atgctttggtcccttaacttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataa 23202997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 26202493 - 26202421
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||||| |||||||||||| ||||||||| | ||||| |||| ||||||| |||| ||||||||    
T  26202493 tttggtcccttaacttatttttgaatttcattttggtcccttaactttaaactgtctcaatttggtcccataa 26202421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 98 - 169
Target Start/End: Original strand, 31711101 - 31711173
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||||| ||||||| |||| |||||||| || |||||||||||||||||| |||| || |||||    
T  31711101 tttggtcccttaacttatttttggatttcattttggtcctttaactataaagtgtctcaatttggtctcataa 31711173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 40146730 - 40146658
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtc-tctaactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||||  |||||||  ||||||||||||| | |||||||||||||||||| |||| ||||||||    
T  40146730 tttggtcccttaacgtatttttggtttttattttggtcctttaactataaagtgtctcaatttggtcccataa 40146658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 46796133 - 46796061
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||||| |||||||  ||| ||||||||| | |||||||||||||||||| |||| ||||||||    
T  46796133 tttggtcccttaacttatttttggttttaattttggtcccctaactataaagtgtctcaatttggtcccataa 46796061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 94 - 165
Target Start/End: Complemental strand, 53401562 - 53401490
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatccc 165  Q
    ||||||||||||||||||| ||||||| |||||||||| ||| | |||||||||| ||||||| |||| ||||    
T  53401562 atgctttggtcccttaacttatttttggattttattttagtcccataactataaactgtctcaatttggtccc 53401490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 94 - 160
Target Start/End: Original strand, 15445441 - 15445508
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttg 160  Q
    ||||||||||||||||||| ||||||| |||| |||||||| | |||| |||||||||||||| ||||    
T  15445441 atgctttggtcccttaacttatttttggatttcattttggtcccctaattataaagtgtctcaatttg 15445508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 98 - 165
Target Start/End: Complemental strand, 26791531 - 26791464
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctctaactataaagtgtctcactttgatccc 165  Q
    ||||||| ||||||| ||||||| |||||||||| ||| |||| |||||||||||||| |||| ||||    
T  26791531 tttggtctcttaacttatttttggattttattttagtccctaattataaagtgtctcaatttggtccc 26791464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 171
Target Start/End: Complemental strand, 28370752 - 28370674
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatcccataaat 171  Q
    ||||||||||||||||||| ||||||| |||| | |||||| |||||||| |||| ||||||| |||| |||| |||||    
T  28370752 atgctttggtcccttaacttatttttggatttcaatttggtcctctaactttaaactgtctcaatttggtcccctaaat 28370674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 171
Target Start/End: Complemental strand, 37560406 - 37560332
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataaat 171  Q
    ||||||||||||||| |||||||  ||| | ||||||| | |||||||||||||||||| |||| ||||||||||    
T  37560406 tttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggtcccataaat 37560332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 171
Target Start/End: Original strand, 53400190 - 53400268
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataaat 171  Q
    ||||||||| ||||||||| ||||||  |||| ||||||||| | |||||||||||||||||| |||| ||| ||||||    
T  53400190 atgctttggccccttaacttatttttagatttcattttggtcccataactataaagtgtctcaatttggtcctataaat 53400268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 128 - 169
Target Start/End: Complemental strand, 307881 - 307840
Alignment:
Q  128 ttttggtctctaactataaagtgtctcactttgatcccataa 169  Q
    ||||| |||||||||||||||||||||| |||||||||||||    
T  307881 ttttgttctctaactataaagtgtctcaatttgatcccataa 307840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 32508430 - 32508506
Alignment:
Q  94 atgctttggtcccttaacta-atttttgaattttattttggtctct-aactataaagtgtctcactttgatcccataa 169  Q
    |||||||||||||||||||  |||||||||||| ||||||||| || |||| |||| ||||||| |||||||||||||    
T  32508430 atgctttggtcccttaactttatttttgaattt-attttggtcccttaactttaaactgtctcaatttgatcccataa 32508506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 205
Target Start/End: Original strand, 936225 - 936333
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataaattttctgtcattatttcttttgatca 196  Q
    |||| |||||||||| ||||||| |||||||||||||| | |||||||||||| | | | ||||||||| ||  | ||||||  |||  |||||||||||    
T  936225 tttgatcccttaacttatttttggattttattttggtcccttaactataaagtattttaatttgatcccttatgtcttctgttgttacctcttttgatca 936324  T
Q  197 tcttcgtta 205  Q
    ||| |||||    
T  936325 tctccgtta 936333  T

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Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 1273539 - 1273468
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||||| |||||||  ||||| ||||||| | |||||||||||||||||| |||| ||||||||    
T  1273539 tttggtcccttaacttatttttgg-ttttaatttggtcccctaactataaagtgtctcaatttggtcccataa 1273468  T

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Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 165
Target Start/End: Original strand, 2309853 - 2309921
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatccc 165  Q
    ||||||||||||| | ||||||| |||| ||||||||||| ||| |||||||||| ||| |||||||||    
T  2309853 tttggtcccttaatttatttttggatttcattttggtctcataattataaagtgtttcaatttgatccc 2309921  T

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Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 165
Target Start/End: Complemental strand, 12396981 - 12396913
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatccc 165  Q
    ||||||||||||||| ||||| | |||| |||||||| | ||||||||||||||||||| |||| ||||    
T  12396981 tttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtccc 12396913  T

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Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 23202245 - 23202321
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||||||| | |||||||||||| ||||||||| | ||||| ||||  |||||| |||| ||||||||    
T  23202245 atgctttggtcccttaatttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataa 23202321  T

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Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 165
Target Start/End: Original strand, 26428661 - 26428733
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatccc 165  Q
    ||||||||||||||||||| |||||||||||| | |||||| | |||||| |||| ||||||| |||| ||||    
T  26428661 atgctttggtcccttaacttatttttgaatttcagtttggtcccctaactttaaactgtctcaatttggtccc 26428733  T

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Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 165
Target Start/End: Complemental strand, 30672175 - 30672103
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatccc 165  Q
    ||||||||||||||||||| ||||| | |||| ||||||||| | ||||| |||||||||||| |||| ||||    
T  30672175 atgctttggtcccttaacttattttcggatttcattttggtcccgtaactttaaagtgtctcaatttggtccc 30672103  T

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Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 343
Target Start/End: Complemental strand, 36604781 - 36604701
Alignment:
Q  264 tattaattttctttaattttaaccatttgattgatt-tttaaaagatgacggttgaattatgtatggtatattatacttta 343  Q
    |||||||||| |||||||||||||||||||||  || ||||||||| |||  |||||| ||||  ||| ||||||||||||    
T  36604781 tattaattttttttaattttaaccatttgattttttctttaaaagaggaccattgaatcatgtggggtctattatacttta 36604701  T

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Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 41690154 - 41690078
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||| |||||| |||| |||||||||||||||||||||| | ||||| ||||  |||||| |||| ||||||||    
T  41690154 atgctttagtccctcaacttatttttgaattttattttggtcccttaactttaaaccgtctcaatttggtcccataa 41690078  T

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Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 56001379 - 56001303
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttgg-tctctaactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||||||||| |||||| | ||| |||||||  | ||||||||||||||||||| |||| ||| ||||    
T  56001379 atgctttggtcccttaacttattttttattttcattttggccccctaactataaagtgtctcaatttggtcctataa 56001303  T

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Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 98 - 176
Target Start/End: Original strand, 27408772 - 27408851
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtc-tctaactataaagtgtctcactttgatcccataaattttct 176  Q
    ||||||||||||||| |||||    ||| | ||||||| |||||||||||||||||||| |||| |||||||||| ||||    
T  27408772 tttggtcccttaacttattttcagttttcaatttggtcatctaactataaagtgtctcaatttggtcccataaatcttct 27408851  T

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Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 155
Target Start/End: Complemental strand, 937209 - 937147
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctca 155  Q
    ||||||||||||||||| | ||||| | |||| |||||||| | |||||||||||||||||||    
T  937209 atgctttggtcccttaatttattttcggatttcattttggtcccctaactataaagtgtctca 937147  T

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Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 178
Target Start/End: Complemental strand, 3217717 - 3217635
Alignment:
Q  97 ctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatcccataaattttctgt 178  Q
    ||||| |||||||||| |||||||||||| | |||||| || ||||| |||||||| | | ||||||| ||||||| ||||||    
T  3217717 ctttgatcccttaacttatttttgaatttcactttggtcctttaactttaaagtgttttaatttgatctcataaatcttctgt 3217635  T

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Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 135
Target Start/End: Complemental strand, 44664434 - 44664396
Alignment:
Q  97 ctttggtcccttaactaatttttgaattttattttggtc 135  Q
    |||||||||||||||| ||||||| ||||||||||||||    
T  44664434 ctttggtcccttaacttatttttggattttattttggtc 44664396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 155
Target Start/End: Complemental strand, 52882037 - 52881979
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctca 155  Q
    ||||||||||||| | ||||||| ||||||||||||| | || ||||||||||||||||    
T  52882037 tttggtcccttaatttatttttggattttattttggtcccctgactataaagtgtctca 52881979  T

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Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 155
Target Start/End: Original strand, 56000292 - 56000354
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctca 155  Q
    |||||||| |||||||||| |||||||| ||| |||||| || | ||||||||||||||||||    
T  56000292 atgctttgatcccttaacttatttttgattttcattttgatcccctaactataaagtgtctca 56000354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 165
Target Start/End: Complemental strand, 8516960 - 8516891
Alignment:
Q  97 ctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatccc 165  Q
    |||||||||||||||| |||||||||||| | ||||||| | ||||| |||| ||||||| |||| ||||    
T  8516960 ctttggtcccttaacttatttttgaatttcaatttggtcccttaactttaaattgtctcaatttggtccc 8516891  T

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Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 28189408 - 28189367
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtc 135  Q
    |||||||||||||| |||| |||||||||||| |||||||||    
T  28189408 atgctttggtccctcaacttatttttgaatttcattttggtc 28189367  T

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Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 135
Target Start/End: Complemental strand, 34457675 - 34457638
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtc 135  Q
    ||||||||||||| | ||||||||||||||||||||||    
T  34457675 tttggtcccttaatttatttttgaattttattttggtc 34457638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 44655726 - 44655767
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtc 135  Q
    ||||||||||||||||||| ||||||  ||||||||||||||    
T  44655726 atgctttggtcccttaacttattttttgattttattttggtc 44655767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 165
Target Start/End: Complemental strand, 19049979 - 19049911
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatccc 165  Q
    ||||||||||||||| ||||||| |||| |||||| | | |||| |||||||||||||| |||| ||||    
T  19049979 tttggtcccttaacttatttttggatttcattttgatcccctaattataaagtgtctcaatttggtccc 19049911  T

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Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 165
Target Start/End: Complemental strand, 26428952 - 26428884
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatccc 165  Q
    |||| |||||||||| |||||||||||| | |||||| |||||||| |||| ||||||| |||| ||||    
T  26428952 tttgctcccttaacttatttttgaatttcaatttggtcctctaactttaaattgtctcaatttggtccc 26428884  T

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Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 28509984 - 28509908
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    |||||||||||||| |||| |||||||||||| |||||| || | ||||| ||||  |||||| |||| ||||||||    
T  28509984 atgctttggtccctcaacttatttttgaatttcattttgatcccttaactttaaaccgtctcaatttggtcccataa 28509908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 165
Target Start/End: Original strand, 29833377 - 29833449
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatccc 165  Q
    ||||||||||||||||||| ||||| | |||| |||||||| | |||| |||||| ||||||| |||| ||||    
T  29833377 atgctttggtcccttaacttattttcggatttcattttggtcccctaattataaaatgtctcaatttggtccc 29833449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 165
Target Start/End: Complemental strand, 29834543 - 29834471
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatccc 165  Q
    ||||||||||||||||||| ||||| | |||| |||||| | | |||||||||| || ||||| |||||||||    
T  29834543 atgctttggtcccttaacttattttcggatttcattttgatcccctaactataatgtatctcaatttgatccc 29834471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 165
Target Start/End: Original strand, 35050922 - 35050990
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtct-ctaactataaagtgtctcactttgatccc 165  Q
    |||||||||| || | |||||||||||||| ||||||||  ||||| |||| ||||||| |||||||||    
T  35050922 tttggtccctaaatttatttttgaattttaatttggtctattaactttaaactgtctcaatttgatccc 35050990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 169
Target Start/End: Original strand, 38553938 - 38554010
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtct-ctaactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||| | |||||    |||||||||||||| ||||||||||||||||||| |||| || |||||    
T  38553938 tttggtcccttaatttattttctgtttttattttggtcttctaactataaagtgtctcaatttggtctcataa 38554010  T

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Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 160
Target Start/End: Original strand, 52880818 - 52880886
Alignment:
Q  94 atgctttggtcccttaactaatttttgaatttt-attttggtctc-taactataaagtgtctcactttg 160  Q
    |||||||| |||||||||| ||||| | ||||| ||||||||| | |||||||||||||||||| ||||    
T  52880818 atgctttgctcccttaacttattttcggatttttattttggtcccctaactataaagtgtctcaatttg 52880886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 159; Significance: 1e-84; HSPs: 83)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 94 - 350
Target Start/End: Original strand, 32979093 - 32979350
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtc-tctaactataaagtgtctcactttgatcccataaattttctgtcattatttcttttg 192  Q
    |||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||  ||||  |||||||    
T  32979093 atgctttggtcccttaactaatttttaaatttcattttggtcctctaactataaagtgtctcaatttgatcccataaattttctgcaattacctcttttg 32979192  T
Q  193 atcatcttcgttaatttttaacattaaaagactaaagtgaactatatttaaaagtggttcactgtagaccgtattaattttctttaattttaaccatttg 292  Q
     || ||| ||||| ||||||||||||||||||||| |||||||||||||||| |||||||||  ||||||||||||| ||| ||||||||||||||||||    
T  32979193 gtcctctccgttagtttttaacattaaaagactaaggtgaactatatttaaaggtggttcaccatagaccgtattaaattt-tttaattttaaccatttg 32979291  T
Q  293 attgatt-tttaaaagatgacggttgaattatgtatggtatattatactttattgtaaa 350  Q
    ||||||| ||||||||||||| ||||||||||||| |||||||| ||||||||||||||    
T  32979292 attgattctttaaaagatgactgttgaattatgtagggtatattgtactttattgtaaa 32979350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 93 - 342
Target Start/End: Original strand, 11219434 - 11219684
Alignment:
Q  93 gatgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataaattttctgtcattatttctttt 191  Q
    ||||||||||||| |||||| ||||||| |||| ||||||||| | |||||||||||||||||| |||| || ||| | | ||||| | ||   | ||||    
T  11219434 gatgctttggtccgttaacttatttttggatttcattttggtcccctaactataaagtgtctcaatttggtctcatgagtcttctgccgtttactatttt 11219533  T
Q  192 gatcatcttcgttaatttttaacattaaaagactaaagtgaactatatttaaaagtggttcactgtagaccgtattaattttctttaattttaaccattt 291  Q
    | |||||| |||||  ||||||||| ||||  |||| |||||| ||||||||| |||||||||  |||| |||||||| ||| |||||||||||||||||    
T  11219534 ggtcatctccgttagattttaacatcaaaattctaaggtgaaccatatttaaaggtggttcaccatagatcgtattaaattt-tttaattttaaccattt 11219632  T
Q  292 gattgatt-tttaaaagatgacggttgaattatgtatggtatattatacttt 342  Q
    ||||  || ||||||||| ||| ||||||||||||| ||| |||| ||||||    
T  11219633 gattttttctttaaaagaggaccgttgaattatgtagggtctattgtacttt 11219684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 94 - 179
Target Start/End: Original strand, 7820395 - 7820481
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatcccataaattttctgtc 179  Q
    ||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||||| ||| ||||  |||||||||||| ||||    
T  7820395 atgctttggtcccttaacttatttttgaatttcattttggtcctctaactataaagtgtttcaatttggacccataaattttatgtc 7820481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 94 - 179
Target Start/End: Complemental strand, 11220769 - 11220683
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatcccataaattttctgtc 179  Q
    ||||||||||||||||||| |||||||||||| |||||||| | ||||||||||||||||||| |||| ||| |||||| |||||||    
T  11220769 atgctttggtcccttaacttatttttgaatttcattttggtcccctaactataaagtgtctcaatttggtcctataaatcttctgtc 11220683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 137 - 347
Target Start/End: Original strand, 39133066 - 39133276
Alignment:
Q  137 ctaactataaagtgtctcactttgatcccataaattttctgtcattatttcttttgatcatcttcgttaatttttaacattaaaagactaaagtgaacta 236  Q
    ||||||||||||||||||| |||| |||| ||  | |||| || |||  ||||||| || |||  |||| |||||||||| ||| | |||| |||||| |    
T  39133066 ctaactataaagtgtctcaatttggtcccttatgtcttctctcgttacctcttttggtcctctctgttagtttttaacatcaaatgtctaaggtgaacca 39133165  T
Q  237 tatttaaaagtggttcactgtagaccgtattaattttctttaattttaaccatttgattgatt-tttaaaagatgacggttgaattatgtatggtatatt 335  Q
    |||||||| ||||| |||  ||  || || ||| ||| |||||||||||||||||||||  || ||||||||| ||| ||||||| ||||| ||| ||||    
T  39133166 tatttaaaggtggtccaccatatgccttactaaattt-tttaattttaaccatttgattttttctttaaaagaggacagttgaatcatgtaaggtctatt 39133264  T
Q  336 atactttattgt 347  Q
     |||||||||||    
T  39133265 gtactttattgt 39133276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 98 - 347
Target Start/End: Complemental strand, 17350209 - 17349959
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataaattttctgtcattatttcttttgatca 196  Q
    ||||||||||||||| |||||||  ||| | |||| || | |||||||||||||||||| |||| |||| ||  | ||||    |||  ||||||| ||     
T  17350209 tttggtcccttaacttatttttggttttcaatttgttcccctaactataaagtgtctcaatttggtcccttatgtcttctcctgttacctcttttggtcc 17350110  T
Q  197 tcttcgttaatttttaacattaaaagactaaagtgaactatatttaaaagtggttcactgtagaccgtattaattttctttaattttaaccatttgattg 296  Q
    ||| ||||| |||||||||| ||| | |||| |||||| ||||||||| ||||| |||  ||  || || ||| ||| |||||||||||||||||||||     
T  17350109 tctccgttagtttttaacatcaaatgtctaaggtgaaccatatttaaaggtggtccaccatatgccttactaaattt-tttaattttaaccatttgattt 17350011  T
Q  297 att-tttaaaagatgacggttgaattatgtatggtatattatactttattgt 347  Q
     || ||||||||| ||| ||||||| ||||| ||| ||||  ||||||||||    
T  17350010 tttctttaaaagaggaccgttgaatcatgtagggtctattgaactttattgt 17349959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 343
Target Start/End: Complemental strand, 7483543 - 7483386
Alignment:
Q  186 tcttttgatcatcttcgttaatttttaacattaaaagactaaagtgaactatatttaaaagtggttcactgtagaccgtattaattttctttaattttaa 285  Q
    ||||||| |||||| ||||| |||||||||| |||   |||| |||||| ||||| ||||||||  |||  ||  || |||||||||| |||||||||||    
T  7483543 tcttttggtcatctccgttagtttttaacatcaaatatctaaggtgaaccatattaaaaagtggcccaccatatgccttattaatttt-tttaattttaa 7483445  T
Q  286 ccatttgattgatt-tttaaaagatgacggttgaattatgtatggtatattatacttta 343  Q
    ||||||||||  || ||||||||| ||| ||||||| ||||  ||| ||||||||||||    
T  7483444 ccatttgattttttctttaaaagaggaccgttgaatcatgtggggtctattatacttta 7483386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 98 - 179
Target Start/End: Complemental strand, 54654073 - 54653991
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctct-aactataaagtgtctcactttgatcccataaattttctgtc 179  Q
    ||||||||||||||| ||||||| |||| ||||||||| || ||||||||||||||||| |||| |||||||| | |||||||    
T  54654073 tttggtcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataattcttctgtc 54653991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 165
Target Start/End: Original strand, 1301041 - 1301109
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatccc 165  Q
    ||||||||||||||| ||||| |||||||||||||||| | |||||||||||||||||| |||| ||||    
T  1301041 tttggtcccttaacttattttcgaattttattttggtcccataactataaagtgtctcaatttggtccc 1301109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 94 - 165
Target Start/End: Complemental strand, 7822097 - 7822025
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtct-ctaactataaagtgtctcactttgatccc 165  Q
    ||||||||||||||||||| | ||||| ||||||||||||||| |||| |||||||||||||| |||| ||||    
T  7822097 atgctttggtcccttaacttaattttggattttattttggtctcctaattataaagtgtctcaatttggtccc 7822025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 94 - 165
Target Start/End: Original strand, 35633232 - 35633304
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatccc 165  Q
    ||||||||||||||||||| ||||||| |||| |||||||| || |||||||||| ||||||| |||||||||    
T  35633232 atgctttggtcccttaacttatttttggatttcattttggtcctataactataaaatgtctcaatttgatccc 35633304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 94 - 177
Target Start/End: Complemental strand, 47855449 - 47855365
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatcccataaattttctg 177  Q
    ||||||||||||||||||| ||||||| |||| |||||||| |  |||||||||||||||||| |||| ||| |||||| |||||    
T  47855449 atgctttggtcccttaacttatttttggatttcattttggtccgttaactataaagtgtctcaatttggtcctataaatcttctg 47855365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 51214277 - 51214201
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||||||||| |||||||||||| ||||||||| | ||||| |||| ||||||| |||| ||||||||    
T  51214277 atgctttggtcccttaacttatttttgaatttcattttggtcccttaactttaaactgtctcaatttggtcccataa 51214201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 98 - 176
Target Start/End: Original strand, 29536723 - 29536802
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtc-tctaactataaagtgtctcactttgatcccataaattttct 176  Q
    ||||||||||| ||| ||||||| |||| |||||| || |||||||||||||||||||| |||| |||||||||| ||||    
T  29536723 tttggtcccttgacttatttttggatttcattttgatcctctaactataaagtgtctcaatttggtcccataaatcttct 29536802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 205
Target Start/End: Original strand, 39287480 - 39287587
Alignment:
Q  99 ttggtcccttaactaatttttgaattttattttggtc-tctaactataaagtgtctcactttgatcccataaattttctgtcattatttcttttgatcat 197  Q
    |||||||||||||| ||||| | |||| ||||||||| |||||||||||||||||||| |||| |||| ||  ||||||||| |||  ||||||| || |    
T  39287480 ttggtcccttaacttattttcggatttcattttggtcctctaactataaagtgtctcaatttggtcccttatgttttctgtcgttacctcttttggtcct 39287579  T
Q  198 cttcgtta 205  Q
    || |||||    
T  39287580 ctccgtta 39287587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 98 - 171
Target Start/End: Complemental strand, 8372723 - 8372649
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataaat 171  Q
    ||||||||||||||| |||||||  ||| ||||||||| | |||||||||||||||||| |||| ||||||||||    
T  8372723 tttggtcccttaacttatttttggttttcattttggtcccctaactataaagtgtctcaatttggtcccataaat 8372649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 43101903 - 43101985
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtc-tctaactataaagtgtctcactttgatcccataaattttctgtc 179  Q
    ||||||||||||||| |||||||  ||| ||||||||| ||||| |||||||||||||| |||| |||||||| | |||||||    
T  43101903 tttggtcccttaacttatttttggttttcattttggtcctctaattataaagtgtctcaatttggtcccataattcttctgtc 43101985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 98 - 179
Target Start/End: Complemental strand, 51825728 - 51825646
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctct-aactataaagtgtctcactttgatcccataaattttctgtc 179  Q
    ||||||||||||||| ||||||| |||| | ||||||| || ||||||||||||| ||| |||| |||||||||| |||||||    
T  51825728 tttggtcccttaacttatttttggatttcactttggtcccttaactataaagtgtttcaatttggtcccataaatcttctgtc 51825646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 94 - 160
Target Start/End: Complemental strand, 53347109 - 53347043
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctctaactataaagtgtctcactttg 160  Q
    ||||||||||||||||||| ||||| | |||| ||||||||| |||| |||||||||||||| ||||    
T  53347109 atgctttggtcccttaacttattttcggatttcattttggtccctaaatataaagtgtctcaatttg 53347043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 174
Target Start/End: Complemental strand, 10987760 - 10987683
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataaatttt 174  Q
    |||| |||||||||| |||||||  ||| ||||||||| | |||||||||||||||||| |||| |||||||||||||    
T  10987760 tttgatcccttaacttatttttggttttcattttggtcccctaactataaagtgtctcaatttggtcccataaatttt 10987683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 94 - 214
Target Start/End: Complemental strand, 32974334 - 32974213
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatcccataaattttctgtcattatttcttttg 192  Q
    ||||||||||||||||||| ||||| | |||| |||||||| | ||||||||||||||||||| |||| |||| ||  | ||||| | |||  |||||||    
T  32974334 atgctttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgccgttacctcttttg 32974235  T
Q  193 atcatcttcgttaatttttaac 214  Q
     |||||| |||||  |||||||    
T  32974234 gtcatctccgttacattttaac 32974213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 94 - 214
Target Start/End: Original strand, 53047902 - 53048023
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatcccataaattttctgtcattatttcttttg 192  Q
    ||||||||||||||||||| ||||| | |||| |||||||| | ||||||||||||||||||| |||| |||| ||  | ||||||| |||  |||||||    
T  53047902 atgctttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgtcgttacctcttttg 53048001  T
Q  193 atcatcttcgttaatttttaac 214  Q
     || ||| |||||  |||||||    
T  53048002 gtcctctccgttacattttaac 53048023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 97 - 165
Target Start/End: Complemental strand, 55443658 - 55443589
Alignment:
Q  97 ctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatccc 165  Q
    |||||||||||||||| ||||| |||||| |||||||| | ||||||||||||||||||| |||| ||||    
T  55443658 ctttggtcccttaacttattttcgaatttcattttggtcccctaactataaagtgtctcaatttggtccc 55443589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 12105364 - 12105440
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||||||||| |||||||||||| ||||||||| | ||||| ||||| |||||| |||| ||| ||||    
T  12105364 atgctttggtcccttaacttatttttgaatttcattttggtcccttaactttaaagcgtctcaatttggtccaataa 12105440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 12106618 - 12106542
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||| ||||||| |||||||||||| ||||||||||| ||||| ||||  |||||| |||| ||||||||    
T  12106618 atgctttggtctcttaacttatttttgaatttcattttggtctcttaactttaaaccgtctcaatttggtcccataa 12106542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 94 - 165
Target Start/End: Complemental strand, 19579405 - 19579333
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatccc 165  Q
    ||||||||||||||||||| ||||| | |||| ||||||||| | |||||||||||||||||| |||| ||||    
T  19579405 atgctttggtcccttaacttattttcggatttcattttggtcccttaactataaagtgtctcaatttggtccc 19579333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 23886937 - 23886861
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||||||||| |||||||||||| ||||||||| | ||||| ||||  |||||| |||| ||||||||    
T  23886937 atgctttggtcccttaacttatttttgaatttcattttggtcccttaactttaaatcgtctcaatttggtcccataa 23886861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 30431380 - 30431456
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||||||||| |||||||||||| ||||||||| | ||| | |||| ||||||| |||| ||||||||    
T  30431380 atgctttggtcccttaacttatttttgaatttcattttggtcccttaattttaaactgtctcaatttggtcccataa 30431456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 30838577 - 30838505
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||||| |||||||||||||||||||||| | ||||| |||| | ||||| |||| ||||||||    
T  30838577 tttggtcccttaacttatttttgaattttattttggtcccttaactttaaactatctcaatttggtcccataa 30838505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 94 - 165
Target Start/End: Original strand, 32973144 - 32973216
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatccc 165  Q
    ||||||||||||||||||| ||||| | |||| |||||||| | ||||||||||||||||||| |||| ||||    
T  32973144 atgctttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtccc 32973216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 98 - 165
Target Start/End: Complemental strand, 40502322 - 40502254
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatccc 165  Q
    ||||||||||||||| ||||||| ||||||||||||| | ||||||||||||| ||||| ||| |||||    
T  40502322 tttggtcccttaacttatttttggattttattttggtcccctaactataaagtatctcaatttaatccc 40502254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 46987330 - 46987406
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||||||||| |||||||||||| ||||||||| | ||||| ||||  |||||| |||| ||||||||    
T  46987330 atgctttggtcccttaacttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataa 46987406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 97 - 169
Target Start/End: Complemental strand, 47767058 - 47766986
Alignment:
Q  97 ctttggtcccttaactaatttttgaattttattttggtctctaactataaagtgtctcactttgatcccataa 169  Q
    ||||||| | |||||| |||||||  ||| ||||||||| ||||||||||||||||||| |||| ||||||||    
T  47767058 ctttggttcattaacttatttttggttttcattttggtccctaactataaagtgtctcaatttggtcccataa 47766986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 94 - 165
Target Start/End: Complemental strand, 48035435 - 48035363
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatccc 165  Q
    ||||||||||||||||||| ||||| | |||| |||||||| | ||||||||||||||||||| |||| ||||    
T  48035435 atgctttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtccc 48035363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 48252938 - 48253014
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||||||||| ||| ||   ||||||||||||| | |||||||||||||||||| |||| ||||||||    
T  48252938 atgctttggtcccttaacttattctttgtttttattttggtcccctaactataaagtgtctcaatttggtcccataa 48253014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 98 - 165
Target Start/End: Original strand, 48825821 - 48825889
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttg-gtctctaactataaagtgtctcactttgatccc 165  Q
    ||||||||||||||| ||||| |||||||||||||  || ||||||||||||||||||| |||| ||||    
T  48825821 tttggtcccttaacttattttcgaattttattttgattccctaactataaagtgtctcaatttggtccc 48825889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 98 - 177
Target Start/End: Complemental strand, 49122109 - 49122029
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctct-aactataaagtgtctcactttgatcccataaattttctg 177  Q
    |||||||| |||||| |||||||  ||| |||||||||||| ||||||||||||||||| |||| || ||||| |||||||    
T  49122109 tttggtcctttaacttatttttggttttcattttggtctcttaactataaagtgtctcaatttggtctcataagttttctg 49122029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 94 - 177
Target Start/End: Complemental strand, 51401462 - 51401378
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataaattttctg 177  Q
    ||||| ||||||||||||| |||||||  ||| | ||||||| | |||||||||||||||||| |||| |||||||||| |||||    
T  51401462 atgctctggtcccttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtcccataaatcttctg 51401378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 98 - 165
Target Start/End: Complemental strand, 53049144 - 53049076
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatccc 165  Q
    ||||||||||||||| ||||| | ||||||||||||| | ||||||||||||||||||| |||| ||||    
T  53049144 tttggtcccttaacttattttcggattttattttggtcccctaactataaagtgtctcaatttggtccc 53049076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 94 - 165
Target Start/End: Original strand, 55442599 - 55442671
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatccc 165  Q
    |||||||| |||||||||| |||||  ||||| ||||||||| | |||||||||||||||||| |||||||||    
T  55442599 atgctttgatcccttaacttattttcaaatttcattttggtcccctaactataaagtgtctcaatttgatccc 55442671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 163
Target Start/End: Original strand, 48034025 - 48034084
Alignment:
Q  105 ccttaactaatttttgaattttattttggtc-tctaactataaagtgtctcactttgatc 163  Q
    |||||||| ||||| | |||||||||||||| |||||||||||||||||||| |||||||    
T  48034025 ccttaacttattttcggattttattttggtcctctaactataaagtgtctcaatttgatc 48034084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 94 - 160
Target Start/End: Complemental strand, 52293634 - 52293567
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttg 160  Q
    ||||||||||||||||||| ||||| | |||| |||||||| | ||||||||||||||||||| ||||    
T  52293634 atgctttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttg 52293567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 171
Target Start/End: Original strand, 42632715 - 42632789
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataaat 171  Q
    ||||||||||||||| | |||||  ||| | ||||||| | |||||||||||||||||| |||||||||||||||    
T  42632715 tttggtcccttaacttacttttggttttcaatttggtcccctaactataaagtgtctcaatttgatcccataaat 42632789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 171
Target Start/End: Complemental strand, 42633993 - 42633919
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatcccataaat 171  Q
    ||||||||||||||| |||||||| ||| | |||||| | ||||||||| ||||||||| |||| ||||||||||    
T  42633993 tttggtcccttaacttatttttgattttcaatttggtcccctaactatagagtgtctcaatttggtcccataaat 42633919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 155
Target Start/End: Original strand, 52292599 - 52292661
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctca 155  Q
    ||||||||||||||||||| ||||| | |||| |||||||| | |||||||||||||||||||    
T  52292599 atgctttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctca 52292661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 295
Target Start/End: Original strand, 53808327 - 53808524
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataaattttctgtcattatttcttttgatca 196  Q
    ||||||||||||||| ||||| |  ||| | ||||||||| |||||||||||||||||| | || |||||||||| || |||| ||   | ||||| |||    
T  53808327 tttggtcccttaacttattttcggttttgaatttggtctcctaactataaagtgtctcaatctggtcccataaatcttatgtcgtttactattttggtca 53808426  T
Q  197 tcttcgttaatttttaacattaaaagactaaagtgaactatatttaaaagtggttcactgtagaccgtattaattttctttaattttaaccatttgatt 295  Q
    ||| | ||| |||||||||| |||   |||| |||||  |||| |||| ||||| |||  || ||| |||||| ||| || |||||||||| |||||||    
T  53808427 tctccattagtttttaacatcaaatttctaaggtgaatcatatctaaaggtggtccaccataaaccttattaaattt-ttaaattttaaccctttgatt 53808524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 94 - 131
Target Start/End: Complemental strand, 383083 - 383046
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttatttt 131  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  383083 atgctttggtcccttaacttatttttgaattttatttt 383046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 7583715 - 7583756
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtc 135  Q
    ||||||||||||||||||| |||||||||||| |||||||||    
T  7583715 atgctttggtcccttaacttatttttgaatttcattttggtc 7583756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 19283972 - 19283931
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtc 135  Q
    |||||||||||| |||||| ||||||||||||||||||||||    
T  19283972 atgctttggtcctttaacttatttttgaattttattttggtc 19283931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 97 - 169
Target Start/End: Original strand, 23886124 - 23886197
Alignment:
Q  97 ctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    |||||||||||||||| |||||||||||| ||||||||| | ||||| ||||  |||||| |||| ||||||||    
T  23886124 ctttggtcccttaacttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataa 23886197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 186 - 295
Target Start/End: Complemental strand, 34903012 - 34902904
Alignment:
Q  186 tcttttgatcatcttcgttaatttttaacattaaaagactaaagtgaactatatttaaaagtggttcactgtagaccgtattaattttctttaattttaa 285  Q
    ||||||| |||||| ||||| |||||||||  ||| | ||||||||||| ||||||||| ||||| |||  | |||| || ||| ||| |||||||||||    
T  34903012 tcttttggtcatctccgttagtttttaacaccaaatgtctaaagtgaaccatatttaaaggtggtgcaccatggaccttagtaaattt-tttaattttaa 34902914  T
Q  286 ccatttgatt 295  Q
    || |||||||    
T  34902913 ccttttgatt 34902904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 46988580 - 46988539
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtc 135  Q
    ||||||||||||||||||| |||||||||||| |||||||||    
T  46988580 atgctttggtcccttaacttatttttgaatttcattttggtc 46988539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 105 - 177
Target Start/End: Original strand, 47806834 - 47806907
Alignment:
Q  105 ccttaactaatttttgaattttattttggtctct-aactataaagtgtctcactttgatcccataaattttctg 177  Q
    |||||||| ||||||| |||| ||||||||| || || |||||||||||||| |||||||| |||||| |||||    
T  47806834 ccttaacttatttttggatttcattttggtcccttaattataaagtgtctcaatttgatcctataaatcttctg 47806907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 12105596 - 12105520
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctct-aactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||||||||| |||||||||||| |||||| || || |||| ||||  |||||| |||| ||||||||    
T  12105596 atgctttggtcccttaacttatttttgaatttcattttgatccctcaactttaaaccgtctcaatttggtcccataa 12105520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 13041952 - 13042028
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||||||||| |||||||||||| |||||| || | ||||| ||||  |||||| |||| ||||||||    
T  13041952 atgctttggtcccttaacttatttttgaatttcattttgatcccttaactttaaaccgtctcaatttggtcccataa 13042028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 13050029 - 13050105
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||||||||| |||||||||||| |||||| || | ||||| ||||  |||||| |||| ||||||||    
T  13050029 atgctttggtcccttaacttatttttgaatttcattttgatcccttaactttaaaccgtctcaatttggtcccataa 13050105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 26799013 - 26798941
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatcccataa 169  Q
    ||||||| ||||||| |||||||  |||||||||||| | ||||||||||| ||||||| |||| ||||||||    
T  26799013 tttggtctcttaacttatttttggtttttattttggtcccctaactataaaatgtctcaatttggtcccataa 26798941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 161
Target Start/End: Original strand, 33563958 - 33564022
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttga 161  Q
    ||||||||||||||| ||||||| |||| ||||| || | ||||||||||||||||||| |||||    
T  33563958 tttggtcccttaacttatttttggatttcattttagtcccctaactataaagtgtctcaatttga 33564022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 165
Target Start/End: Complemental strand, 39288550 - 39288478
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatccc 165  Q
    ||||||||||| ||||||| ||||| | |||| |||||||| | ||||||||||||||||||| |||| ||||    
T  39288550 atgctttggtcacttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtccc 39288478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 44384403 - 44384331
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||||| |||||||||||| ||||| ||| | ||||| |||| ||||||| |||| ||||||||    
T  44384403 tttggtcccttaacttatttttgaatttcattttagtcccttaactttaaactgtctcaatttggtcccataa 44384331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 160
Target Start/End: Original strand, 7583475 - 7583542
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttg 160  Q
    |||||||||||| |||||| ||||| | |||| |||||||| | ||||||||||||||||||| ||||    
T  7583475 atgctttggtccattaacttattttcggatttcattttggtccactaactataaagtgtctcaatttg 7583542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 30432187 - 30432116
Alignment:
Q  99 ttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatcccataa 169  Q
    |||||||||||| | ||||||||||||||||||||| || ||||| |||| | ||||| |||| ||||||||    
T  30432187 ttggtcccttaatttatttttgaattttattttggtactttaactttaaactatctcaatttggtcccataa 30432116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 164
Target Start/End: Complemental strand, 35835930 - 35835859
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcc 164  Q
    ||||||||||||||||| |  |||| | ||||||||||| |||| ||| |||||||||||||| ||||||||    
T  35835930 atgctttggtcccttaatttgttttcggattttattttgatctcctaagtataaagtgtctcaatttgatcc 35835859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 164
Target Start/End: Complemental strand, 35892647 - 35892576
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcc 164  Q
    ||||||||||||||||| |  |||| | ||||||||||| |||| ||| |||||||||||||| ||||||||    
T  35892647 atgctttggtcccttaatttgttttcggattttattttgatctcctaagtataaagtgtctcaatttgatcc 35892576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 160
Target Start/End: Original strand, 53342721 - 53342788
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttg 160  Q
    |||||||||| |||||||| ||||| | |||| ||||||||| | |||||||||||||||||| ||||    
T  53342721 atgctttggttccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttg 53342788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 155
Target Start/End: Complemental strand, 5417155 - 5417097
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctca 155  Q
    ||||||||||||||| ||||| | |||| |||||||| | |||||||||||||||||||    
T  5417155 tttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctca 5417097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 163
Target Start/End: Complemental strand, 11483098 - 11483028
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatc 163  Q
    ||||||||||||||||||| |||||   |||| ||||||||| | |||||||||||||||| | |||||||    
T  11483098 atgctttggtcccttaacttattttcagatttcattttggtcccttaactataaagtgtcttaatttgatc 11483028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 132
Target Start/End: Complemental strand, 13997495 - 13997457
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttg 132  Q
    |||||||||||||| |||| |||||||||||||||||||    
T  13997495 atgctttggtccctcaacttatttttgaattttattttg 13997457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 171
Target Start/End: Original strand, 41386139 - 41386213
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataaat 171  Q
    ||||||||||||||| |||||||  ||| | ||||||| | |||||||||||||||||| |||| | ||||||||    
T  41386139 tttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggttccataaat 41386213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 132
Target Start/End: Original strand, 46988349 - 46988387
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttg 132  Q
    ||||||||||||||||||| |||||||||||| ||||||    
T  46988349 atgctttggtcccttaacttatttttgaatttcattttg 46988387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 179
Target Start/End: Complemental strand, 47808209 - 47808131
Alignment:
Q  102 gtcccttaactaatttttgaattttattttggtctct-aactataaagtgtctcactttgatcccataaattttctgtc 179  Q
    ||||||||||| ||||||| |||| | ||||||  || ||||||||||||||||| |||| || ||||||| |||||||    
T  47808209 gtcccttaacttatttttggatttcactttggttccttaactataaagtgtctcaatttggtctcataaatcttctgtc 47808131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 51400224 - 51400302
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatcccataaattttc 175  Q
    ||||||||||||||| |||||||  ||| | |||| | | ||||||||||||||||||| |||  ||||||||||||||    
T  51400224 tttggtcccttaacttatttttggttttcactttgattccctaactataaagtgtctcaatttagtcccataaattttc 51400302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 165
Target Start/End: Original strand, 5416206 - 5416275
Alignment:
Q  97 ctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatccc 165  Q
    |||||||||||||||| ||||| | |||| |||||||| | ||||||||||| ||||||| |||| ||||    
T  5416206 ctttggtcccttaacttattttcggatttcattttggtcccctaactataaaatgtctcaatttggtccc 5416275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 135
Target Start/End: Original strand, 19283743 - 19283780
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtc 135  Q
    ||||||||||||||| |||||||||||| |||||||||    
T  19283743 tttggtcccttaacttatttttgaatttcattttggtc 19283780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 20486018 - 20486059
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtc 135  Q
    |||||||||| |||||||| |||||||||||| |||||||||    
T  20486018 atgctttggtaccttaacttatttttgaatttcattttggtc 20486059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 135
Target Start/End: Original strand, 30838351 - 30838388
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtc 135  Q
    |||||||||| |||| ||||||||||||||||||||||    
T  30838351 tttggtccctcaacttatttttgaattttattttggtc 30838388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 170
Target Start/End: Complemental strand, 41387540 - 41387467
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataaa 170  Q
    ||||||||||||||| |||||||  ||| | ||||||| | |||||||||| ||||||| |||| |||||||||    
T  41387540 tttggtcccttaacttatttttggttttcaatttggtcccctaactataaaatgtctcaatttggtcccataaa 41387467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 131
Target Start/End: Original strand, 54109501 - 54109538
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttatttt 131  Q
    ||||||||||||||||||| |||||||||||| |||||    
T  54109501 atgctttggtcccttaacttatttttgaatttcatttt 54109538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 23886705 - 23886781
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||||||||| |||||| ||||| |||||  || | ||||| |||| ||||||| |||| ||||||||    
T  23886705 atgctttggtcccttaacttattttttaatttcatttttatcccttaactttaaaatgtctcaatttggtcccataa 23886781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 30431960 - 30432036
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    |||||||||||||| |||| |||||||||||| |||||| || | ||||| ||||  |||||| |||| ||||||||    
T  30431960 atgctttggtccctcaacttatttttgaatttcattttgatcccttaactttaaaccgtctcaatttggtcccataa 30432036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 51213456 - 51213532
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||| ||||||| |||||||||||| ||||| ||| | ||||| ||||  |||||| |||| ||||||||    
T  51213456 atgctttggtctcttaacttatttttgaatttcattttcgtcccttaactttaaaccgtctcaatttggtcccataa 51213532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 114 - 169
Target Start/End: Original strand, 51214065 - 51214121
Alignment:
Q  114 atttttgaattttattttggtctct-aactataaagtgtctcactttgatcccataa 169  Q
    |||||||||||| ||||||||| || |||| |||| ||||||| |||||||||||||    
T  51214065 atttttgaatttcattttggtcccttaactttaaactgtctcaatttgatcccataa 51214121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 165
Target Start/End: Complemental strand, 52705419 - 52705347
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatccc 165  Q
    |||||||| ||||| |||| ||||| | |||| ||||||||| | |||||||||||||||||| |||| ||||    
T  52705419 atgctttgatccctcaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtccc 52705347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 96; Significance: 5e-47; HSPs: 76)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 97 - 342
Target Start/End: Complemental strand, 26056255 - 26056009
Alignment:
Q  97 ctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataaattttctgtcattatttcttttgatc 195  Q
    |||||||||||||||| ||||||| |||| ||||||||| | |||||||||||||||||| |||| |||||||||| || |||| ||   | ||||| ||    
T  26056255 ctttggtcccttaacttatttttggatttcattttggtcccctaactataaagtgtctcaatttggtcccataaatcttttgtcgtttactattttggtc 26056156  T
Q  196 atcttcgttaatttttaacattaaaagactaaagtgaactatatttaaaagtggttcactgtagaccgtattaattttctttaattttaaccatttgatt 295  Q
     ||| |||||  ||||||||| ||||| ||||||||||| ||||||||| |||||||||  ||| ||||||||| ||| |||||||||||||||||||||    
T  26056155 ctctccgttagattttaacatcaaaagtctaaagtgaaccatatttaaaggtggttcaccataggccgtattaaattt-tttaattttaaccatttgatt 26056057  T
Q  296 gatt-tttaaaagatgacggttgaattatgtatggtatattatacttt 342  Q
     ||| ||||||||| ||| ||||||||||||| ||| |||| ||||||    
T  26056056 tattctttaaaagaggaccgttgaattatgtagggtctattgtacttt 26056009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 98 - 343
Target Start/End: Original strand, 50678375 - 50678617
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctct-aactataaagtgtctcactttgatcccataaattttctgtcattatttcttttgatca 196  Q
    ||||||||||||||| |||||||||||| |||||| || || ||||||||| ||||||| ||||   || ||||| | ||| | |||  ||||||| ||     
T  50678375 tttggtcccttaacttatttttgaatttcattttgatcccttaactataaaatgtctcaatttgg--ccttaaatct-ctgccgttacctcttttggtcc 50678471  T
Q  197 tcttcgttaatttttaacattaaaagactaaagtgaactatatttaaaagtggttcactgtagaccgtattaattttctttaattttaaccatttgattg 296  Q
    |||  |||| |||||||||| ||||  |||| |||||| ||||||||| |||||||||  ||||||||||||| ||  |||||||||||||||||||||     
T  50678472 tctctgttagtttttaacatcaaaactctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaatt--tttaattttaaccatttgattt 50678569  T
Q  297 att-tttaaaagatgacggttgaattatgtatggtatattatacttta 343  Q
     || ||||||||| ||| |||||||||  || ||| |||| |||||||    
T  50678570 tttctttaaaagaggactgttgaattacatagggtctattgtacttta 50678617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 3978053 - 3978135
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatcccataaattttctgtc 179  Q
    ||||||||||||||| |||||||||||| |||||||| || |||||||||||||||||| ||||||||||||| | |||||||    
T  3978053 tttggtcccttaacttatttttgaatttcattttggtcctttaactataaagtgtctcaatttgatcccataattcttctgtc 3978135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 32823463 - 32823539
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||||||||| |||||||||||||||||||||| | ||||| |||| ||||||| |||| ||||||||    
T  32823463 atgctttggtcccttaacttatttttgaattttattttggtcccttaactttaaactgtctcaatttggtcccataa 32823539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 94 - 176
Target Start/End: Original strand, 14390263 - 14390346
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatcccataaattttct 176  Q
    ||||||||||||||||||| |||||| ||||| |||||||| ||||||||||||| ||||||| |||| | |||||||| ||||    
T  14390263 atgctttggtcccttaacttattttttaatttcattttggtcctctaactataaaatgtctcaatttggttccataaatcttct 14390346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 94 - 214
Target Start/End: Original strand, 2236818 - 2236939
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatcccataaattttctgtcattatttcttttg 192  Q
    ||||||||||||||||||| ||||| | |||| |||||||| | ||||||||||||||||||| |||| |||| ||  | ||||||| |||  |||||||    
T  2236818 atgctttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgtcgttacctcttttg 2236917  T
Q  193 atcatcttcgttaatttttaac 214  Q
    ||| ||| |||||  |||||||    
T  2236918 atcctctccgttacattttaac 2236939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 94 - 165
Target Start/End: Complemental strand, 1873965 - 1873893
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatccc 165  Q
    |||||||| |||||||||| |||||  |||||||||||||| | ||||||||||||||||||| |||||||||    
T  1873965 atgctttgatcccttaacttattttcaaattttattttggtcccctaactataaagtgtctcaatttgatccc 1873893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 3979420 - 3979348
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||||| ||||||| |||| ||||||||| | |||||||||||||||||| |||| ||||||||    
T  3979420 tttggtcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataa 3979348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 165
Target Start/End: Original strand, 14312784 - 14312852
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtct-ctaactataaagtgtctcactttgatccc 165  Q
    ||||||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||| |||| ||||    
T  14312784 tttggtcccttaacttatttttggattttattttggtctcctagctataaagtgtctcaatttggtccc 14312852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 20171273 - 20171197
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    |||||||||||| |||||| |||||||||||||||||||||| | ||||| |||| ||||||| |||| ||||||||    
T  20171273 atgctttggtcctttaacttatttttgaattttattttggtcccttaactttaaactgtctcaatttggtcccataa 20171197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 33941322 - 33941398
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||||||||| ||||||||||||||||||||| || ||| |||||| ||||||| |||| ||| ||||    
T  33941322 atgctttggtcccttaacttatttttgaattttattttggtcctttaattataaaatgtctcaatttggtcctataa 33941398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 94 - 165
Target Start/End: Complemental strand, 34532813 - 34532741
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatccc 165  Q
    |||||||||||| |||||| ||||| ||||||||||||||| | ||||||||||||||||||| |||| ||||    
T  34532813 atgctttggtcctttaacttattttcgaattttattttggtcccctaactataaagtgtctcaatttggtccc 34532741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 169
Target Start/End: Original strand, 39193590 - 39193662
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||||| |||||| ||||||||||||||| | ||||| |||| ||||||| |||||||||||||    
T  39193590 tttggtcccttaacttattttttaattttattttggtcccttaactttaaactgtctcaatttgatcccataa 39193662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 50679932 - 50679856
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||||||||| ||||||   ||||||||||||| | |||||||||||||||||| |||| ||||||||    
T  50679932 atgctttggtcccttaacttatttttagtttttattttggtcccttaactataaagtgtctcaatttggtcccataa 50679856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 94 - 171
Target Start/End: Original strand, 20953293 - 20953371
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttatttt-ggtctctaactataaagtgtctcactttgatcccataaat 171  Q
    ||||||||||||||||||| ||||||| |||| ||||| | ||| |||||||||||||||||| |||| ||| ||||||    
T  20953293 atgctttggtcccttaacttatttttggatttcattttagttctataactataaagtgtctcaatttggtcctataaat 20953371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 147
Target Start/End: Complemental strand, 31860565 - 31860516
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctctaactataaa 147  Q
    ||||||||||||||| |||||||||||| ||||||||| |||||||||||    
T  31860565 tttggtcccttaacttatttttgaatttcattttggtccctaactataaa 31860516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 182
Target Start/End: Original strand, 52741497 - 52741582
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtc-tctaactataaagtgtctcactttgatcccataaattttctgtcatt 182  Q
    ||||||||||||||| ||||||   ||||||||||||| ||||||||||||||||||||  |||||||| ||  | ||||||||||    
T  52741497 tttggtcccttaacttatttttcgtttttattttggtcctctaactataaagtgtctcaaattgatcccttatgtcttctgtcatt 52741582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 94 - 165
Target Start/End: Original strand, 1898009 - 1898081
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttgg-tctctaactataaagtgtctcactttgatccc 165  Q
    ||||||||||||||||||| |||||||||||||| ||||| || |||||| |||| ||||||| |||| ||||    
T  1898009 atgctttggtcccttaacttatttttgaattttaatttggttccctaactttaaattgtctcaatttggtccc 1898081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 94 - 165
Target Start/End: Complemental strand, 2238089 - 2238017
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatccc 165  Q
    ||||||||||||||||||| ||||| | |||| ||||||||| | |||||||||||||||||| |||| ||||    
T  2238089 atgctttggtcccttaacttattttcggatttcattttggtcccataactataaagtgtctcaatttggtccc 2238017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 94 - 177
Target Start/End: Original strand, 13641262 - 13641346
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataaattttctg 177  Q
    |||||||| |||||||||| |||||||  ||| | ||||||| | |||||||||||||||||| |||| |||||||||| |||||    
T  13641262 atgctttgatcccttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtcccataaatcttctg 13641346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 13642668 - 13642592
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtc-tctaactataaagtgtctcactttgatcccataa 169  Q
    |||||||||||| |||||| |||||||  ||| ||||||||| ||||| | |||||||||||| |||||||||||||    
T  13642668 atgctttggtcctttaacttatttttggttttcattttggtcctctaattttaaagtgtctcagtttgatcccataa 13642592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 13930782 - 13930710
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtc-tctaactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||||| |||||||  ||| | ||||||| |||||||||||||||||||| |||| ||||||||    
T  13930782 tttggtcccttaacttatttttggttttcaatttggtcctctaactataaagtgtctcaatttggtcccataa 13930710  T

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Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 25866783 - 25866707
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||||||||| |||||||||||| ||||||||| | ||||| ||||  |||||| |||| ||||||||    
T  25866783 atgctttggtcccttaacttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataa 25866707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 94 - 165
Target Start/End: Original strand, 35683060 - 35683132
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatccc 165  Q
    ||||||||||||||||||| ||||| | |||| |||||||| | ||||||||||||||||||| |||| ||||    
T  35683060 atgctttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtccc 35683132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 98 - 165
Target Start/End: Original strand, 42244513 - 42244581
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtc-tctaactataaagtgtctcactttgatccc 165  Q
    ||||||||||||||| ||||||| |||| ||||||||| | |||||||||| ||||||| |||||||||    
T  42244513 tttggtcccttaacttatttttggatttcattttggtcatataactataaaatgtctcaatttgatccc 42244581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 46280882 - 46280806
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    |||||||||||| |||||| |||||||||||||||||||||| | ||| | ||||  |||||| |||||||||||||    
T  46280882 atgctttggtcctttaacttatttttgaattttattttggtcccttaattttaaaccgtctcaatttgatcccataa 46280806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 51760044 - 51760120
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||||||||| |||||||||||| ||||||||| | ||||| ||||  |||||| |||| ||||||||    
T  51760044 atgctttggtcccttaacttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataa 51760120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 52370988 - 52371064
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||||||||| |||||||||||| ||||||||| | ||||| ||||  |||||| |||| ||||||||    
T  52370988 atgctttggtcccttaacttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataa 52371064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 94 - 160
Target Start/End: Complemental strand, 9123510 - 9123443
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttg 160  Q
    ||||||||||||||||||| ||||| | |||||||||||||| | |||||||||||||| ||| ||||    
T  9123510 atgctttggtcccttaacttattttcggattttattttggtcccttaactataaagtgtttcaatttg 9123443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 94 - 160
Target Start/End: Original strand, 34531668 - 34531735
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttg 160  Q
    ||||||||||||||||||| ||||| | |||| |||||||| ||||||||||||| ||||||| ||||    
T  34531668 atgctttggtcccttaacttattttcggatttcattttggtcctctaactataaaatgtctcaatttg 34531735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 179
Target Start/End: Complemental strand, 14071310 - 14071228
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtc-tctaactataaagtgtctcactttgatcccataaattttctgtc 179  Q
    ||||||||||||| | |||||||  ||| | ||||||| |||||||||||||||||||| |||| |||||||| | |||||||    
T  14071310 tttggtcccttaatttatttttggttttcaatttggtcctctaactataaagtgtctcaatttggtcccataagtcttctgtc 14071228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 171
Target Start/End: Original strand, 25785977 - 25786051
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataaat 171  Q
    ||||||||||||||| |||||||  ||| | ||||||| | |||||||||||||||||| |||| ||||||||||    
T  25785977 tttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggtcccataaat 25786051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 179
Target Start/End: Original strand, 26054903 - 26054988
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataaattttctgtc 179  Q
    |||||||||||||| |||| ||||||| |||| ||||||||| | |||||||||||||| ||| |||| | |||||||| |||||||    
T  26054903 atgctttggtccct-aacttatttttggatttcattttggtcccctaactataaagtgtttcaatttggttccataaatcttctgtc 26054988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 155
Target Start/End: Complemental strand, 48974517 - 48974455
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttgg-tctctaactataaagtgtctca 155  Q
    ||||||||||||||||||| ||||| | |||| ||||||| || |||||||||||||||||||    
T  48974517 atgctttggtcccttaacttattttcggatttcattttggttccctaactataaagtgtctca 48974455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 100 - 160
Target Start/End: Original strand, 9119813 - 9119874
Alignment:
Q  100 tggtcccttaactaatttttgaattttattttggtc-tctaactataaagtgtctcactttg 160  Q
    ||||||||||||| ||||| | |||||| ||||||| |||||||||||||||||||| ||||    
T  9119813 tggtcccttaacttattttcggattttaatttggtcctctaactataaagtgtctcaatttg 9119874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 27114688 - 27114729
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtc 135  Q
    |||||||||||||| |||| ||||||||||||||||||||||    
T  27114688 atgctttggtccctcaacttatttttgaattttattttggtc 27114729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 33850307 - 33850348
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtc 135  Q
    ||||||||||||||||||| ||||||| ||||||||||||||    
T  33850307 atgctttggtcccttaacttatttttggattttattttggtc 33850348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 33943671 - 33943630
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtc 135  Q
    ||||||||||||||||||| ||||||| ||||||||||||||    
T  33943671 atgctttggtcccttaacttatttttggattttattttggtc 33943630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 96 - 160
Target Start/End: Original strand, 51424258 - 51424323
Alignment:
Q  96 gctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttg 160  Q
    ||||||||||||||||| ||||||| |||| ||||||||| | ||| |||||||||||||| ||||    
T  51424258 gctttggtcccttaacttatttttggatttcattttggtcccttaattataaagtgtctcaatttg 51424323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 52371895 - 52371854
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtc 135  Q
    ||||||||||||||||||| |||||||||||| |||||||||    
T  52371895 atgctttggtcccttaacttatttttgaatttcattttggtc 52371854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 165
Target Start/End: Original strand, 25035363 - 25035435
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatccc 165  Q
    ||||||||||||||||||| |||||||||||| | |||||| | |||||| |||| ||||||| |||| ||||    
T  25035363 atgctttggtcccttaacttatttttgaatttcaatttggtcccctaactttaaattgtctcaatttggtccc 25035435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 165
Target Start/End: Original strand, 25040576 - 25040648
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatccc 165  Q
    ||||||||||||||||||| |||||||||||| | |||||| | |||||| |||| ||||||| |||| ||||    
T  25040576 atgctttggtcccttaacttatttttgaatttcaatttggtcccctaactttaaattgtctcaatttggtccc 25040648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 165
Target Start/End: Original strand, 38458091 - 38458163
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatccc 165  Q
    ||||||||||||||||||| ||||||| |||| | |||||| | |||||| |||| ||||||| |||||||||    
T  38458091 atgctttggtcccttaacttatttttggatttcaatttggtcccctaactttaaattgtctcaatttgatccc 38458163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 47511372 - 47511448
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||||||||| |||||||||||| |||||| || | ||| | |||| ||||||| |||| ||||||||    
T  47511372 atgctttggtcccttaacttatttttgaatttcattttgatcccttaattttaaactgtctcaatttggtcccataa 47511448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 165
Target Start/End: Complemental strand, 48935221 - 48935149
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatccc 165  Q
    ||||||| ||||||||||| ||||| | |||| |||||||| | ||||||||||||||||||| |||| ||||    
T  48935221 atgctttcgtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtccc 48935149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 165
Target Start/End: Original strand, 48973203 - 48973275
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatccc 165  Q
    |||||||||| |||||||| ||||| | |||| ||||| ||| | |||||||||||||||||| |||||||||    
T  48973203 atgctttggttccttaacttattttcggatttcattttagtcccctaactataaagtgtctcaatttgatccc 48973275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 342
Target Start/End: Complemental strand, 51218969 - 51218827
Alignment:
Q  201 cgttaatttttaacattaaaagactaaagtgaactatatttaaaagtggttcactgtagaccgtattaattttctttaattttaaccatttgattgattt 300  Q
    ||||| |||||||||| ||| | ||||||||||| |||||||||  |||| |||  ||  || |||||| ||| ||||||||||| ||||||||| ||||    
T  51218969 cgttagtttttaacatcaaatgtctaaagtgaaccatatttaaagatggtccaccatatgccttattaaattt-tttaattttaatcatttgatttattt 51218871  T
Q  301 --ttaaaagatgacggttgaattatgtatggtatattatacttt 342  Q
      |||||||| ||| ||||||| ||||  ||| |||| ||||||    
T  51218870 cattaaaagaggactgttgaatcatgtggggtctattgtacttt 51218827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 98 - 176
Target Start/End: Original strand, 13929304 - 13929383
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctct-aactataaagtgtctcactttgatcccataaattttct 176  Q
    ||||||||||||||| |||||||  ||| | ||||||| || ||||||||||||||||| |||| |||| ||||| ||||    
T  13929304 tttggtcccttaacttatttttggttttcaatttggtcccttaactataaagtgtctcaatttggtcccgtaaatcttct 13929383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 107 - 169
Target Start/End: Complemental strand, 32823639 - 32823576
Alignment:
Q  107 ttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatcccataa 169  Q
    |||||| ||||||||||||||||||||| | |||||| |||| ||||||| |||| ||||||||    
T  32823639 ttaacttatttttgaattttattttggtcccctaactttaaactgtctcaatttggtcccataa 32823576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 195
Target Start/End: Original strand, 1061333 - 1061435
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatcccataaattttctgtcattatttcttttg 192  Q
    ||||||||||| ||||||| |||||   ||||||||||||| | | ||||||||||||||||| |||| |||| ||  |||| |||| |||  |||||||    
T  1061333 atgctttggtcgcttaacttattttcagattttattttggtccccaaactataaagtgtctcaatttggtcccttatgttttttgtcgttacctcttttg 1061432  T
Q  193 atc 195  Q
    |||    
T  1061433 atc 1061435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 211
Target Start/End: Original strand, 9592287 - 9592361
Alignment:
Q  137 ctaactataaagtgtctcactttgatcccataaattttctgtcattatttcttttgatcatcttcgttaattttt 211  Q
    ||||||||||||||| ||| ||||||||||||||| || |||| ||   | |||||||||| | |||||||||||    
T  9592287 ctaactataaagtgtttcaatttgatcccataaatcttttgtcgtttactattttgatcatttccgttaattttt 9592361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 182
Target Start/End: Original strand, 16217456 - 16217534
Alignment:
Q  105 ccttaactaatttttgaattttattttggtc-tctaactataaagtgtctcactttgatcccataaattttctgtcatt 182  Q
    |||||||| |||||||  ||||| |||| || |||||||||||||||||||| |||| ||| |||||| || |||||||    
T  16217456 ccttaacttatttttggtttttaatttgatcatctaactataaagtgtctcaatttggtcctataaatcttatgtcatt 16217534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 171
Target Start/End: Complemental strand, 25787271 - 25787197
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataaat 171  Q
    ||||||||||||||| |||||||  ||| | ||||||| | |||||||||||||||||| |||| || |||||||    
T  25787271 tttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggtctcataaat 25787197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 171
Target Start/End: Complemental strand, 42248412 - 42248338
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataaat 171  Q
    |||||||| | |||| ||||||| |||| ||||||||| | |||||||||||||||||| |||| ||| ||||||    
T  42248412 tttggtccttcaacttatttttggatttcattttggtcccataactataaagtgtctcaatttggtcctataaat 42248338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 135
Target Start/End: Complemental strand, 43190606 - 43190568
Alignment:
Q  97 ctttggtcccttaactaatttttgaattttattttggtc 135  Q
    |||||||||||||||| |||||||||||||| |||||||    
T  43190606 ctttggtcccttaacttatttttgaattttaatttggtc 43190568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 132
Target Start/End: Original strand, 47511963 - 47512001
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttg 132  Q
    |||||||||||||| |||| |||||||||||||||||||    
T  47511963 atgctttggtccctcaacttatttttgaattttattttg 47512001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 171
Target Start/End: Original strand, 49139810 - 49139884
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataaat 171  Q
    ||||||||||||||| |||||||  |||  |||||||| | |||||||||||||||||| |||| || |||||||    
T  49139810 tttggtcccttaacttatttttggttttcgttttggtcccataactataaagtgtctcaatttggtctcataaat 49139884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 131
Target Start/End: Complemental strand, 4388148 - 4388111
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttatttt 131  Q
    ||||||||||||||||||| |||||||||||| |||||    
T  4388148 atgctttggtcccttaacttatttttgaatttcatttt 4388111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 179
Target Start/End: Complemental strand, 19466271 - 19466230
Alignment:
Q  138 taactataaagtgtctcactttgatcccataaattttctgtc 179  Q
    |||||||||||||||||| |||| |||||||||| |||||||    
T  19466271 taactataaagtgtctcaatttggtcccataaatcttctgtc 19466230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 25865959 - 25866000
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtc 135  Q
    |||||||| |||||||||| |||||||||||| |||||||||    
T  25865959 atgctttgatcccttaacttatttttgaatttcattttggtc 25866000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 295
Target Start/End: Original strand, 27689366 - 27689493
Alignment:
Q  171 ttttctgtcattatttcttttgatcatcttcgttaatttttaacattaaaagactaaagtgaactatatttaaaagtggttcactgtagaccgtattaa- 269  Q
    ||||||||| |||  ||||||| || ||| ||||| |||||||||  ||| | ||||||||||| ||||||||| ||||| ||   | |||| ||||||     
T  27689366 ttttctgtcgttacctcttttggtcctctccgttagtttttaacaccaaatgtctaaagtgaaccatatttaaaggtggtccatcatggaccttattaat 27689465  T
Q  270 --ttttctttaattttaaccatttgatt 295  Q
      |||| ||||||||||||| |||||||    
T  27689466 ttttttttttaattttaaccttttgatt 27689493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 28309767 - 28309808
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtc 135  Q
    ||||||||||||||||||| |||||| ||||| |||||||||    
T  28309767 atgctttggtcccttaacttattttttaatttcattttggtc 28309808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 29001233 - 29001192
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtc 135  Q
    ||||||||||||||||||| ||||||| |||| |||||||||    
T  29001233 atgctttggtcccttaacttatttttggatttcattttggtc 29001192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 295
Target Start/End: Complemental strand, 30551607 - 30551499
Alignment:
Q  186 tcttttgatcatcttcgttaatttttaacattaaaagactaaagtgaactatatttaaaagtggttcactgtagaccgtattaattttctttaattttaa 285  Q
    ||||||| |||||| ||||| |||||| ||| ||| | ||||||||||| ||||| ||| ||||| |||  | |||| || ||| ||| |||||||||||    
T  30551607 tcttttggtcatctccgttagtttttagcatcaaatgtctaaagtgaaccatattaaaaggtggtgcaccatggaccttagtaaattt-tttaattttaa 30551509  T
Q  286 ccatttgatt 295  Q
    || |||||||    
T  30551508 ccttttgatt 30551499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 34653444 - 34653513
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctct-aactataaagtgtctcactttgatccca 166  Q
    ||||||||||||||| ||||| |  ||| | ||||||| || ||||||||||||||||| ||||||||||    
T  34653444 tttggtcccttaacttattttcggttttcactttggtcccttaactataaagtgtctcaatttgatccca 34653513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 179
Target Start/End: Complemental strand, 36511397 - 36511356
Alignment:
Q  138 taactataaagtgtctcactttgatcccataaattttctgtc 179  Q
    |||||||||||||||||| |||| |||||||||| |||||||    
T  36511397 taactataaagtgtctcaatttggtcccataaatcttctgtc 36511356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 335
Target Start/End: Complemental strand, 37624603 - 37624439
Alignment:
Q  171 ttttctgtcattatttcttttgatcatcttcgttaatttttaacattaaaagactaaagtgaactatatttaaaagtggttcactgtagaccgtattaat 270  Q
    ||||||||| |||  ||||||| || ||| ||||| |||||||||| ||| | ||||||||||| ||||| ||| || || |||  | |||| || |||     
T  37624603 ttttctgtcgttacatcttttggtcctctccgttagtttttaacatcaaatgtctaaagtgaaccatattaaaaggttgtgcaccatggaccttagtaaa 37624504  T
Q  271 tttctttaattttaaccatttgattgatt-tttaaaagatgacggttgaattatgtatggtatatt 335  Q
    ||| ||||||||||||| |||||||  || ||||||||| ||  ||||||| ||||| ||| ||||    
T  37624503 ttt-tttaattttaaccttttgattttttctttaaaagaggattgttgaatcatgtagggtctatt 37624439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 169
Target Start/End: Complemental strand, 51760780 - 51760707
Alignment:
Q  97 ctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||| |||| |||||||||||| ||||||||| | ||||| ||||  |||||| |||| ||||||||    
T  51760780 ctttggtccctcaacttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataa 51760707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 175
Target Start/End: Original strand, 2971746 - 2971786
Alignment:
Q  135 ctctaactataaagtgtctcactttgatcccataaattttc 175  Q
    ||||||||||||||||||||| |||| |||||||| |||||    
T  2971746 ctctaactataaagtgtctcaatttggtcccataatttttc 2971786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 4387998 - 4388074
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||| ||||||| |||||||||||| |||||| || | ||||| ||||  |||||| |||| ||||||||    
T  4387998 atgctttggtctcttaacttatttttgaatttcattttgatcccttaactttaaaccgtctcaatttggtcccataa 4388074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 177
Target Start/End: Original strand, 21277003 - 21277083
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataaattttctg 177  Q
    ||||||||||||||| |||||||  ||| | ||||||  | |||||||||||| ||||| |||| |||||||||| |||||    
T  21277003 tttggtcccttaacttatttttggttttcaatttggttgcctaactataaagtatctcaatttggtcccataaatcttctg 21277083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 25866191 - 25866115
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||||||| | |||||||||||| |||||| || | ||||| ||||  |||||| |||| ||||||||    
T  25866191 atgctttggtcccttaaattatttttgaatttcattttgatcccttaactttaaaccgtctcaatttggtcccataa 25866115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 32824013 - 32824089
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    |||||||||||||| |||| |||||||||||| |||||| || | ||||| ||||  |||||| |||| ||||||||    
T  32824013 atgctttggtccctcaacttatttttgaatttcattttgatcccttaactttaaaccgtctcaatttggtcccataa 32824089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 165
Target Start/End: Complemental strand, 35684313 - 35684242
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatccc 165  Q
    |||||||||||| |||||| ||||| | ||||||||||||| | ||||||||||| ||||||| |||| ||||    
T  35684313 atgctttggtccattaacttattttcggattttattttggtcccctaactataaa-tgtctcaatttggtccc 35684242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 169
Target Start/End: Original strand, 37694662 - 37694734
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctct-aactataaagtgtctcactttgatcccataa 169  Q
    |||||||||| |||| |||||| ||||| ||||||||| || |||| |||| ||| ||| |||||||||||||    
T  37694662 tttggtccctcaacttatttttaaatttcattttggtcccttaactttaaactgtttcaatttgatcccataa 37694734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 47512191 - 47512119
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||| ||||||| |||||||||||| ||||||||| | ||||| |||| ||||||| |||| || |||||    
T  47512191 tttggtctcttaacttatttttgaatttcattttggtcccttaactttaaactgtctcaatttggtctcataa 47512119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 95; Significance: 2e-46; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 98 - 343
Target Start/End: Original strand, 18693707 - 18693952
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctct-aactataaagtgtctcactttgatcccataaattttctgtcattatttcttttgatca 196  Q
    ||||||||||||||| |||||||||||||||||||||| || ||||||||| ||||||| | || |||||||||| ||||||| |||  ||||||| ||     
T  18693707 tttggtcccttaacttatttttgaattttattttggtcccttaactataaaatgtctcaatctggtcccataaatcttctgtcgttacctcttttggtcc 18693806  T
Q  197 tcttcgttaatttttaacattaaaagactaaagtgaactatatttaaaagtggttcactgtagaccgtattaattttctttaattttaaccatttgattg 296  Q
    |||  |||| |||||||||| ||||  |||| |||||| |||| |||| |||||||||  ||||||||||||| ||| ||||||||||| |||||||||     
T  18693807 tctctgttagtttttaacatcaaaactctaaggtgaaccatatataaaggtggttcaccatagaccgtattaaattt-tttaattttaatcatttgattt 18693905  T
Q  297 atttttaaaagatgacggttgaattatgtatggtatattatacttta 343  Q
     | ||||||||| ||| |||||||||||||| || |||| |||||||    
T  18693906 ttctttaaaagaggaccgttgaattatgtatagtctattgtacttta 18693952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 96 - 350
Target Start/End: Original strand, 21387644 - 21387899
Alignment:
Q  96 gctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatcccataaattttctgtcattatttcttttgat 194  Q
    ||||||||||||||||| |||||||||||| |||||||| | ||||||||||| ||||||| |||| |||||||||| ||||| | |||  ||||||| |    
T  21387644 gctttggtcccttaacttatttttgaatttcattttggtcccctaactataaaatgtctcaatttggtcccataaatcttctgccgttacctcttttggt 21387743  T
Q  195 catcttcgttaatttttaacattaaaagactaaagtgaactatatttaaaagtggttcactgtagaccgtattaattttctttaattttaaccatttgat 294  Q
    | | |  |||| |||||||||| ||||  |||| |||||  ||||||||| |||||||||  ||| ||||||||| ||| ||||||||||||||||||||    
T  21387744 cctgtctgttagtttttaacatcaaaactctaaggtgaaacatatttaaaggtggttcaccataggccgtattaaattt-tttaattttaaccatttgat 21387842  T
Q  295 tgatt-tttaaaagatgacggttgaattatgtatggtatattatactttattgtaaa 350  Q
    |  || ||||||||| ||| ||||||||||||| ||| |||| ||||||| ||||||    
T  21387843 tttttctttaaaagaggaccgttgaattatgtagggtctattgtactttactgtaaa 21387899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 98 - 244
Target Start/End: Complemental strand, 7345497 - 7345350
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtc-tctaactataaagtgtctcactttgatcccataaattttctgtcattatttcttttgatca 196  Q
    |||| |||||||||| |||||||||||| ||||||||| |||||||||||||||||||| |||| |||||||||| || |||| |||| ||||||| ||     
T  7345497 tttgatcccttaacttatttttgaatttcattttggtcctctaactataaagtgtctcaatttggtcccataaatattttgtcgttatctcttttggtcc 7345398  T
Q  197 tcttcgttaatttttaacattaaaagactaaagtgaactatatttaaa 244  Q
    |||  | || |||||||||| ||||  |||| |||||| |||||||||    
T  7345397 tctatgatagtttttaacatcaaaactctaaggtgaaccatatttaaa 7345350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 94 - 176
Target Start/End: Original strand, 15613510 - 15613593
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtct-ctaactataaagtgtctcactttgatcccataaattttct 176  Q
    |||||||| |||||||||| ||||||| |||| |||||||||| ||||||||||||||||||| |||| |||||||||| ||||    
T  15613510 atgctttgatcccttaacttatttttggatttcattttggtcttctaactataaagtgtctcaatttggtcccataaatcttct 15613593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 1982717 - 1982793
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||||||||| |||||||||||||||||||||| | ||||| |||| | ||||| |||| ||||||||    
T  1982717 atgctttggtcccttaacttatttttgaattttattttggtcccttaactttaaactatctcaatttggtcccataa 1982793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 177
Target Start/End: Complemental strand, 10085952 - 10085872
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataaattttctg 177  Q
    ||||||||||||||| |||||||||||| | ||||||||| ||||| |||||||| ||| |||| |||||||||| |||||    
T  10085952 tttggtcccttaacttatttttgaatttcactttggtctcttaactttaaagtgtttcaatttggtcccataaatcttctg 10085872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 94 - 165
Target Start/End: Original strand, 15509200 - 15509272
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatccc 165  Q
    ||||||||||||||||||| ||||| | ||||||||||||| | ||||||||||||||||||| |||| ||||    
T  15509200 atgctttggtcccttaacttattttcggattttattttggtcccctaactataaagtgtctcaatttggtccc 15509272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 177
Target Start/End: Complemental strand, 15615067 - 15614987
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtct-ctaactataaagtgtctcactttgatcccataaattttctg 177  Q
    |||||||||||| || ||||||| |||| |||||||||  ||||||||||||||||||| |||| | ||||||||||||||    
T  15615067 tttggtcccttatcttatttttggatttcattttggtccgctaactataaagtgtctcaatttggttccataaattttctg 15614987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 177
Target Start/End: Complemental strand, 22812494 - 22812414
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctct-aactataaagtgtctcactttgatcccataaattttctg 177  Q
    ||||||||||||||| |||||| | ||| ||||| ||| || ||||||||| ||||||||||||||||||||||| |||||    
T  22812494 tttggtcccttaacttattttttattttcattttagtcccttaactataaaatgtctcactttgatcccataaatcttctg 22812414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 37371062 - 37371138
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||||||||| |||||||||||| ||||||||| | ||||| |||| ||||||| |||| ||||||||    
T  37371062 atgctttggtcccttaacttatttttgaatttcattttggtcccttaactttaaattgtctcaatttggtcccataa 37371138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 94 - 164
Target Start/End: Original strand, 32521691 - 32521762
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatcc 164  Q
    |||||||| |||||||||| ||||||  ||||||||||||| | ||||||||||||||||||| ||||||||    
T  32521691 atgctttgatcccttaacttatttttagattttattttggtcccctaactataaagtgtctcaatttgatcc 32521762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 94 - 155
Target Start/End: Original strand, 20988695 - 20988757
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctca 155  Q
    ||||||||||||||||||| ||||| |||||| |||||||| | |||||||||||||||||||    
T  20988695 atgctttggtcccttaacttattttcgaatttcattttggtcccctaactataaagtgtctca 20988757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 182
Target Start/End: Complemental strand, 26404317 - 26404232
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtc-tctaactataaagtgtctcactttgatcccataaattttctgtcatt 182  Q
    |||| |||||||| | |||| ||| ||||| ||||||| | |||||||||||||||||| ||||||||||||||| || |||||||    
T  26404317 tttgatcccttaatttatttatgatttttaatttggtcctttaactataaagtgtctcaatttgatcccataaatcttatgtcatt 26404232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 2472541 - 2472465
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||||||||| |||||||||||| ||||||||| | ||||| ||||  |||||| |||| ||||||||    
T  2472541 atgctttggtcccttaacttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataa 2472465  T

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Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 94 - 165
Target Start/End: Complemental strand, 4568085 - 4568013
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatccc 165  Q
    ||||||||||||||||||| ||||| | |||| |||||||| | ||||||||||||||||||| |||| ||||    
T  4568085 atgctttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtccc 4568013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 94 - 165
Target Start/End: Complemental strand, 5062297 - 5062225
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatccc 165  Q
    ||||||||||||||||||| |||||||||||| |||||||| | ||||  ||||||||||||| |||| ||||    
T  5062297 atgctttggtcccttaacttatttttgaatttcattttggtcccctaatgataaagtgtctcaatttggtccc 5062225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 12938742 - 12938666
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||| ||||||||||| |||||| ||||| ||||||||||| ||||| |||| ||||||| |||| ||||||||    
T  12938742 atgctttagtcccttaacttatttttaaatttcattttggtctcttaactttaaactgtctcaatttggtcccataa 12938666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 94 - 165
Target Start/End: Original strand, 15153882 - 15153954
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatccc 165  Q
    ||||||||||||||||||| |||||||||||||| |||||| || ||||| |||| ||||||| |||| ||||    
T  15153882 atgctttggtcccttaacttatttttgaattttaatttggtcctttaactttaaactgtctcaatttggtccc 15153954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 94 - 165
Target Start/End: Complemental strand, 19051050 - 19050978
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatccc 165  Q
    ||||||||||||||||||| |||||||||||| | |||||| | |||||| |||| ||||||| |||||||||    
T  19051050 atgctttggtcccttaacttatttttgaatttcaatttggtcccctaactttaaactgtctcaatttgatccc 19050978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 18677985 - 18678067
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataaattttctgtc 179  Q
    ||||||||||||||| |||||||  ||| | |||| || | |||||||||||||||||| |||| |||||||||| |||||||    
T  18677985 tttggtcccttaacttatttttggttttcactttgatcccctaactataaagtgtctcaatttggtcccataaatcttctgtc 18678067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 179
Target Start/End: Original strand, 26403320 - 26403398
Alignment:
Q  102 gtcccttaactaatttttgaattttattttggtctct-aactataaagtgtctcactttgatcccataaattttctgtc 179  Q
    |||| |||||| |||||||| ||| | ||||||| || ||||||||||||||||| ||||||| |||||||||| ||||    
T  26403320 gtcctttaacttatttttgattttcaatttggtcccttaactataaagtgtctcaatttgatctcataaattttatgtc 26403398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 6914720 - 6914761
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtc 135  Q
    ||||||||||||||||||| |||||||||||| |||||||||    
T  6914720 atgctttggtcccttaacttatttttgaatttcattttggtc 6914761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 16802400 - 16802359
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtc 135  Q
    ||||||||||||||||||| |||||||||||| |||||||||    
T  16802400 atgctttggtcccttaacttatttttgaatttcattttggtc 16802359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 177
Target Start/End: Original strand, 1273098 - 1273178
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatcccataaattttctg 177  Q
    ||||||||||||| | |||||||  ||| |||||||| || |||||||||| ||||||| |||| |||||||||| |||||    
T  1273098 tttggtcccttaatttatttttggttttcattttggtcctttaactataaaatgtctcaatttggtcccataaatcttctg 1273178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 2472335 - 2472411
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    |||||||| |||||||||| |||||||||||| ||||||||| | ||||| ||||  |||||| |||| ||||||||    
T  2472335 atgctttgctcccttaacttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataa 2472411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 165
Target Start/End: Original strand, 5061033 - 5061105
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatccc 165  Q
    ||||||||||||||||||| ||||||| |||| |||||||| | ||||  ||||||||||||| |||| ||||    
T  5061033 atgctttggtcccttaacttatttttggatttcattttggtcccctaatgataaagtgtctcaatttggtccc 5061105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 233
Target Start/End: Original strand, 5382951 - 5383087
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataaattttctgtcattatttcttttgatca 196  Q
    ||||||||||||||| |||||||  |||   ||||||||| ||| |||||||||||||| |||| |||||||||| ||  ||| ||   | ||||||||     
T  5382951 tttggtcccttaacttatttttggttttctatttggtctcctaattataaagtgtctcaatttggtcccataaatctttggtcgtttactattttgatcc 5383050  T
Q  197 tcttcgttaatttttaacattaaaagactaaagtgaa 233  Q
    ||| ||||| |||||||| ||||| | |||| |||||    
T  5383051 tctccgttagtttttaaccttaaatgtctaaggtgaa 5383087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 6914919 - 6914847
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||||| |||||||||||| ||||||||| | ||||| ||||  |||||| |||| ||||||||    
T  6914919 tttggtcccttaacttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataa 6914847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 12937993 - 12937917
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    |||||||| |||||||||| |||||||||||| ||||||||| | ||||| ||||  |||||| |||| ||||||||    
T  12937993 atgctttgatcccttaacttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataa 12937917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 169
Target Start/End: Original strand, 12947925 - 12947993
Alignment:
Q  102 gtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||| |||||||| ||| |||||| || | |||||||||||||||||| ||||||| |||||    
T  12947925 gtcccttaacttatttttgattttcattttgatcccctaactataaagtgtctcaatttgatctcataa 12947993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 165
Target Start/End: Complemental strand, 15510374 - 15510302
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatccc 165  Q
    ||||||||||||||||||| ||||| | |||| |||||| | | ||||||||||||||||||| |||| ||||    
T  15510374 atgctttggtcccttaacttattttcggatttcattttgatcccctaactataaagtgtctcaatttggtccc 15510302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 16802206 - 16802282
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    |||||| |||||||||||| |||||||||||| ||||||||| | ||||| ||||  |||||| |||| ||||||||    
T  16802206 atgcttgggtcccttaacttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataa 16802282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 32780189 - 32780117
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||||| |||||||||||| ||||||||| | ||||| ||||  |||||| |||| ||||||||    
T  32780189 tttggtcccttaacttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataa 32780117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 137
Target Start/End: Original strand, 21306596 - 21306639
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc 137  Q
    |||||||| |||||||||| |||||||||||| |||||||||||    
T  21306596 atgctttgatcccttaacttatttttgaatttcattttggtctc 21306639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 137
Target Start/End: Original strand, 21314434 - 21314477
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc 137  Q
    |||||||| |||||||||| |||||||||||| |||||||||||    
T  21314434 atgctttgatcccttaacttatttttgaatttcattttggtctc 21314477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 199
Target Start/End: Original strand, 4566956 - 4567062
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataaattttctgtcattatttcttttg 192  Q
    ||||||||||||||||||  ||||| | |||| |||||| || | |||||||||||||||||| |||| |||| ||  | ||||||| |||  |||||||    
T  4566956 atgctttggtcccttaacatattttcggatttcattttgatcccctaactataaagtgtctcaatttggtcccttatgtcttctgtcgttacctcttttg 4567055  T
Q  193 atcatct 199  Q
     ||||||    
T  4567056 gtcatct 4567062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 132
Target Start/End: Original strand, 12937794 - 12937832
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttg 132  Q
    ||||||||||||||||||| |||||| ||||||||||||    
T  12937794 atgctttggtcccttaacttattttttaattttattttg 12937832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 19523992 - 19524073
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataaattttctgtc 179  Q
    ||||||||||||||| |||||||  ||| | ||||||| | |||||||||||||||||| |||| | | ||||||||||||||    
T  19523992 tttggtcccttaacttatttttggttttcaatttggtcccttaactataaagtgtctcaatttggt-ctataaattttctgtc 19524073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 155
Target Start/End: Complemental strand, 38394810 - 38394752
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctca 155  Q
    ||||||||||||||| |||||||||||||| |||||| | |||||| |||| |||||||    
T  38394810 tttggtcccttaacttatttttgaattttaatttggtcccctaactttaaactgtctca 38394752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 165
Target Start/End: Original strand, 641698 - 641767
Alignment:
Q  97 ctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatccc 165  Q
    |||||||||||||||| |||||||||||| | || ||| | ||| || |||||||||||| |||||||||    
T  641698 ctttggtcccttaacttatttttgaatttcaattcggtcccctagctttaaagtgtctcaatttgatccc 641767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 3076828 - 3076869
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtc 135  Q
    ||||||||||||||||||| |||||||||||| | |||||||    
T  3076828 atgctttggtcccttaacttatttttgaatttcaatttggtc 3076869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 12952144 - 12952103
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtc 135  Q
    |||||||| |||||||||| |||||||||||| |||||||||    
T  12952144 atgctttgatcccttaacttatttttgaatttcattttggtc 12952103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 131
Target Start/End: Complemental strand, 28237004 - 28236967
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttatttt 131  Q
    ||||||||||||||||||| |||||||||||| |||||    
T  28237004 atgctttggtcccttaacttatttttgaatttcatttt 28236967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 37380410 - 37380369
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtc 135  Q
    |||||||||||||| |||| |||||||||||| |||||||||    
T  37380410 atgctttggtccctcaacttatttttgaatttcattttggtc 37380369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 5820794 - 5820718
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||||||| | |||||| ||||| ||||| ||| | ||||| |||| ||||||| |||| ||||||||    
T  5820794 atgctttggtcccttaatttatttttaaatttcattttagtcccttaactttaaactgtctcaatttggtcccataa 5820718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 169
Target Start/End: Original strand, 12933764 - 12933832
Alignment:
Q  102 gtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||| |||||||  ||| |||||| || | |||||||||||||||||| ||||||| |||||    
T  12933764 gtcccttaacttatttttggttttcattttgatcccctaactataaagtgtctcaatttgatctcataa 12933832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 169
Target Start/End: Complemental strand, 12936205 - 12936137
Alignment:
Q  102 gtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||| |||||||  ||| ||||||||| | |||||||||||||||||| |||| ||| ||||    
T  12936205 gtcccttaacttatttttggttttcattttggtcccctaactataaagtgtctcaatttggtccaataa 12936137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 12952841 - 12952769
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||||| |||||| ||||| ||||||||| | ||||| ||||  |||||| |||| ||||||||    
T  12952841 tttggtcccttaacttatttttaaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataa 12952769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 18695758 - 18695682
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctct-aactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||||||| | |||||||  ||| |||||  || || ||||||||||||||||| |||| ||||||||    
T  18695758 atgctttggtcccttaatttatttttggttttcattttattcccttaactataaagtgtctcaatttggtcccataa 18695682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 83; Significance: 3e-39; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 94 - 326
Target Start/End: Original strand, 12852891 - 12853124
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataaattttctgtcattatttcttttg 192  Q
    ||||||||||||||||||| | ||||| |||| ||||||||| | |||||||||||||||||| |||| |||||||||| |||| || ||   | |||||    
T  12852891 atgctttggtcccttaacttacttttggatttcattttggtcccctaactataaagtgtctcaatttggtcccataaatcttctatcgtttactattttg 12852990  T
Q  193 atcatcttcgttaatttttaacattaaaagactaaagtgaactatatttaaaagtggttcactgtagaccgtattaattttctttaattttaaccatttg 292  Q
     |||||| |||||  ||||||||| ||||  |||| |||||| ||||||||| |||||||||  ||||||||||||| ||| || |||||||||||||||    
T  12852991 gtcatctccgttagattttaacatcaaaaatctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattt-ttgaattttaaccatttg 12853089  T
Q  293 attgatt-tttaaaagatgacggttgaattatgta 326  Q
    ||| ||| ||||||||| |||  ||||||||||||    
T  12853090 atttattctttaaaagaggaccattgaattatgta 12853124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 98 - 335
Target Start/End: Complemental strand, 3528372 - 3528133
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctct-aactataaagtgtctcactttgatcccataaattttctgtcattatttcttttgatca 196  Q
    |||||||| |||| | |||||||| ||||| ||||||| || ||||||||||||| | |  ||| || ||||||| || |||| ||| ||||| || ||     
T  3528372 tttggtcctttaatttatttttgatttttaatttggtcgctcaactataaagtgttttaagttggtctcataaatcttttgtcgttacttcttctggtct 3528273  T
Q  197 tcttcgttaatttttaacattaaaagactaaagtgaactatatttaaaagtggttcactgtagaccgtattaattttctttaattttaaccatttgattg 296  Q
    |||   ||| ||||||| |  ||||| |||| |||||| ||||||||| |||||||||  ||||||||||||| ||| |||||||||||||| ||||||     
T  3528272 tctctattagtttttaatagcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattt-tttaattttaaccagttgattt 3528174  T
Q  297 att--tttaaaagatgacggttgaattatgtatggtatatt 335  Q
     ||  ||||||||| |||  |||||||||||| ||| ||||    
T  3528173 tttcctttaaaagaggaccattgaattatgtagggtgtatt 3528133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 98 - 343
Target Start/End: Original strand, 23177682 - 23177929
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctc--taactataaagtgtctcactttgatcccataaattttctgtcattatttcttttgatc 195  Q
    ||||||||||||| | |||||||  ||| ||||||||| |  |||||||||||||||||| |||| |||||||||| ||||| | ||     ||||| ||    
T  23177682 tttggtcccttaatttatttttggttttcattttggtccccctaactataaagtgtctcaatttggtcccataaatcttctgccgtttaccattttggtc 23177781  T
Q  196 atcttcgttaatttttaacattaaaagactaaagtgaactatatttaaaagtggttcactgtagaccgtattaattttctttaattttaaccatttgatt 295  Q
     ||| ||||| |||||||||| ||||  ||||  ||||| |||||||||  |||||||| ||||| | |||||| ||| | |||||||||||||||||||    
T  23177782 ctctccgttagtttttaacataaaaaatctaagatgaaccatatttaaagatggttcaccgtagatcttattaaattt-tctaattttaaccatttgatt 23177880  T
Q  296 gatt-tttaaaagatgacggttgaattatgtatggtatattatacttta 343  Q
      || |||||| |  ||| ||||||||||||  ||| |||| |||||||    
T  23177881 ttttctttaaatgcggaccgttgaattatgtcgggtctattgtacttta 23177929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 98 - 343
Target Start/End: Original strand, 23588939 - 23589186
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctc--taactataaagtgtctcactttgatcccataaattttctgtcattatttcttttgatc 195  Q
    ||||||||||||| | |||||||  ||| ||||||||| |  |||||||||||||||||| |||| |||||||||| ||||| | ||     ||||| ||    
T  23588939 tttggtcccttaatttatttttggttttcattttggtccccctaactataaagtgtctcaatttggtcccataaatcttctgccgtttaccattttggtc 23589038  T
Q  196 atcttcgttaatttttaacattaaaagactaaagtgaactatatttaaaagtggttcactgtagaccgtattaattttctttaattttaaccatttgatt 295  Q
     ||| ||||| |||||||||| ||||  ||||  ||||| |||||||||  |||||||| ||||| | |||||| ||| | |||||||||||||||||||    
T  23589039 ctctccgttagtttttaacataaaaaatctaagatgaaccatatttaaagatggttcaccgtagatcttattaaattt-tctaattttaaccatttgatt 23589137  T
Q  296 gatt-tttaaaagatgacggttgaattatgtatggtatattatacttta 343  Q
      || |||||| |  ||| ||||||||||||  ||| |||| |||||||    
T  23589138 ttttctttaaatgcggaccgttgaattatgtcgggtctattgtacttta 23589186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 94 - 177
Target Start/End: Complemental strand, 12854215 - 12854131
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctct-aactataaagtgtctcactttgatcccataaattttctg 177  Q
    ||||||||||||||||||| ||||||  |||| ||||||||| || ||||||||||||||||| |||| |||||||||| |||||    
T  12854215 atgctttggtcccttaacttatttttagatttcattttggtcccttaactataaagtgtctcaatttggtcccataaatcttctg 12854131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 177
Target Start/End: Original strand, 42027202 - 42027282
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtc-tctaactataaagtgtctcactttgatcccataaattttctg 177  Q
    ||||||||||||||| |||||||| ||| ||||||||| |||||||| ||| ||||||| |||| ||||||||||||||||    
T  42027202 tttggtcccttaacttatttttgattttcattttggtcctctaactacaaaatgtctcaatttggtcccataaattttctg 42027282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 94 - 176
Target Start/End: Original strand, 6706931 - 6707014
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatcccataaattttct 176  Q
    ||||||||||||||||||| ||||||| |||| |||||||| | ||||||||||||||||||| |||| | |||||||| ||||    
T  6706931 atgctttggtcccttaacttatttttggatttcattttggtcccctaactataaagtgtctcaatttggttccataaatcttct 6707014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 98 - 171
Target Start/End: Complemental strand, 1625082 - 1625009
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctctaactataaagtgtctcactttgatcccataaat 171  Q
    |||||| |||||||| ||||||| |||| |||||| |||||||||||||||||||||| |||| ||| ||||||    
T  1625082 tttggttccttaacttatttttggatttcattttgatctctaactataaagtgtctcaatttggtcctataaat 1625009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 94 - 165
Target Start/End: Original strand, 5564064 - 5564136
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatccc 165  Q
    ||||||||||||||||||| |||||||||||| ||||||||| | ||| |||||||||||||| |||| ||||    
T  5564064 atgctttggtcccttaacttatttttgaatttcattttggtcccttaattataaagtgtctcaatttggtccc 5564136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 94 - 165
Target Start/End: Complemental strand, 5565256 - 5565184
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatccc 165  Q
    ||||||||||||||||||| |||||||||||| ||||||||| | ||| |||||||||||||| |||| ||||    
T  5565256 atgctttggtcccttaacttatttttgaatttcattttggtcccttaattataaagtgtctcaatttggtccc 5565184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 7038439 - 7038367
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||||| ||||||| |||| ||||||||| | |||||||||||||||||| |||| ||||||||    
T  7038439 tttggtcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataa 7038367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 165
Target Start/End: Complemental strand, 41313374 - 41313306
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatccc 165  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||||||||||||||| | |||||||||    
T  41313374 tttggtcccttaacttattttcgaattttattttggtcccctaactataaagtgtctgaatttgatccc 41313306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 43015544 - 43015620
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||||||||| |||||||||||| ||||||||| | ||||| |||| ||||||| |||| ||||||||    
T  43015544 atgctttggtcccttaacttatttttgaatttcattttggtcccttaactttaaactgtctcaatttggtcccataa 43015620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 94 - 168
Target Start/End: Original strand, 4628887 - 4628962
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatcccata 168  Q
    ||||||| ||||||||||| ||||||| ||||||||||||| |||||  |||||||| ||||| ||||||||||||    
T  4628887 atgctttagtcccttaacttatttttggattttattttggtcctctatatataaagtatctcaatttgatcccata 4628962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 229 - 335
Target Start/End: Complemental strand, 6708954 - 6708848
Alignment:
Q  229 gtgaactatatttaaaagtggttcactgtagaccgtattaattttctttaattttaaccatttgattgatt-tttaaaagatgacggttgaattatgtat 327  Q
    |||||| ||||||||| |||||||||  || |||||||||| ||| | ||||||||||||||||||| ||| ||||||| | ||| |||||||||||||     
T  6708954 gtgaaccatatttaaaggtggttcaccataaaccgtattaaattt-tctaattttaaccatttgatttattctttaaaaaaggaccgttgaattatgtag 6708856  T
Q  328 ggtatatt 335  Q
    ||| ||||    
T  6708855 ggtctatt 6708848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 98 - 176
Target Start/End: Complemental strand, 10368492 - 10368413
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataaattttct 176  Q
    ||||||||||||| | |||||||| ||| | |||| || | |||||||||||||||||| ||||||||||||||||||||    
T  10368492 tttggtcccttaatttatttttgattttcaatttgatcccctaactataaagtgtctcaatttgatcccataaattttct 10368413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 186 - 343
Target Start/End: Original strand, 4512204 - 4512361
Alignment:
Q  186 tcttttgatcatcttcgttaatttttaacattaaaagactaaagtgaactatatttaaaagtggttcactgtagaccgtattaattttctttaattttaa 285  Q
    ||||||| || ||| | ||| |||||||||| |||   |||| |||||| ||||| ||||||||| |||  ||  || |||||||||| ||||||||| |    
T  4512204 tcttttggtcctctccattagtttttaacatcaaatatctaaggtgaaccatattaaaaagtggtccaccatatgccttattaatttt-tttaattttga 4512302  T
Q  286 ccatttgattgatt-tttaaaagatgacggttgaattatgtatggtatattatacttta 343  Q
    ||||||||||  || ||||||||||||| ||||||| ||||  ||| ||||||||||||    
T  4512303 ccatttgattttttctttaaaagatgaccgttgaatcatgtggggtctattatacttta 4512361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 5435164 - 5435240
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||||||||| || ||||||||| ||||||||| | ||||| |||| ||||||| |||| ||||||||    
T  5435164 atgctttggtcccttaacttatatttgaatttcattttggtcccttaactttaaactgtctcaatttggtcccataa 5435240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 187 - 326
Target Start/End: Original strand, 14714591 - 14714730
Alignment:
Q  187 cttttgatcatcttcgttaatttttaacattaaaagactaaagtgaactatatttaaaagtggttcactgtagaccgtattaattttctttaattttaac 286  Q
    |||||| || ||| ||||| |||||||||| ||| | |||| |||||| ||||||||| ||||| |||  ||  || |||||||||| |||||||  |||    
T  14714591 cttttggtcctctccgttagtttttaacatcaaatgtctaaggtgaaccatatttaaaggtggtccaccatacgccttattaatttt-tttaattgcaac 14714689  T
Q  287 catttgattgatt-tttaaaagatgacggttgaattatgta 326  Q
    |||||||||  || ||||||||||||| ||||||| |||||    
T  14714690 catttgattttttctttaaaagatgaccgttgaatcatgta 14714730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 94 - 165
Target Start/End: Original strand, 17179065 - 17179137
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatccc 165  Q
    ||||||||||||||||||| |||||||||||||| |||||| | |||||| |||| ||||||| |||| ||||    
T  17179065 atgctttggtcccttaacttatttttgaattttaatttggtcccctaactttaaactgtctcaatttggtccc 17179137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 17859377 - 17859301
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||||||||| |||||||||||| ||||||||| | ||||  |||| ||||||| |||| ||||||||    
T  17859377 atgctttggtcccttaacttatttttgaatttcattttggtcccttaacgttaaactgtctcaatttggtcccataa 17859301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 27264684 - 27264608
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||| ||||||| |||||||||||| ||||||||| | ||||| |||| ||||||| |||| ||||||||    
T  27264684 atgctttggtctcttaacttatttttgaatttcattttggtcccttaactttaaattgtctcaatttggtcccataa 27264608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 94 - 165
Target Start/End: Original strand, 30202698 - 30202770
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatccc 165  Q
    ||||||||||||||||||| |||||||||||| | |||||| | |||||| |||| ||||||| |||||||||    
T  30202698 atgctttggtcccttaacttatttttgaatttcaatttggtcccctaactttaaattgtctcaatttgatccc 30202770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 199
Target Start/End: Original strand, 3665229 - 3665335
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatcccataaattttctgtcattatttcttttg 192  Q
    ||||||||||||||||||| ||||| | |||| |||||||| ||||||||||||| ||| ||| |||| |||| ||  | ||||| | |||  |||||||    
T  3665229 atgctttggtcccttaacttattttcggatttcattttggtcctctaactataaaatgtttcaatttggtcccttatgtcttctgccgttacctcttttg 3665328  T
Q  193 atcatct 199  Q
    |||||||    
T  3665329 atcatct 3665335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 95 - 160
Target Start/End: Original strand, 10477348 - 10477414
Alignment:
Q  95 tgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttg 160  Q
    |||||||||| ||||||| ||||||| |||| ||||||||||| ||| |||||||||||||| ||||    
T  10477348 tgctttggtctcttaacttatttttggatttcattttggtctcttaattataaagtgtctcaatttg 10477414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 155
Target Start/End: Original strand, 21541066 - 21541128
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctca 155  Q
    ||||||||||||||||||||||||||| |||| ||||||||| | ||||| |||| |||||||    
T  21541066 atgctttggtcccttaactaatttttggatttcattttggtcccttaactttaaattgtctca 21541128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 179
Target Start/End: Complemental strand, 42029065 - 42028983
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtc-tctaactataaagtgtctcactttgatcccataaattttctgtc 179  Q
    ||||||||||||||  |||||||  ||| ||||||||| |||||||||||||||||||  |||| |||||||| | |||||||    
T  42029065 tttggtcccttaacgtatttttggttttcattttggtcatctaactataaagtgtctcgatttggtcccataattcttctgtc 42028983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 98 - 135
Target Start/End: Complemental strand, 10477618 - 10477581
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtc 135  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  10477618 tttggtcccttaacttatttttgaattttattttggtc 10477581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 94 - 166
Target Start/End: Complemental strand, 14482202 - 14482129
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttgg-tctctaactataaagtgtctcactttgatccca 166  Q
    ||||||||||||||||||| |||||||||||| ||||||| ||  ||||| ||||| |||||| |||| |||||    
T  14482202 atgctttggtcccttaacttatttttgaatttcattttggttccttaactttaaagcgtctcaatttggtccca 14482129  T

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Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 27990379 - 27990420
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtc 135  Q
    |||||||||| |||||||| ||||||||||||||||||||||    
T  27990379 atgctttggttccttaacttatttttgaattttattttggtc 27990420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 28076912 - 28076953
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtc 135  Q
    |||||||||| |||||||| ||||||||||||||||||||||    
T  28076912 atgctttggttccttaacttatttttgaattttattttggtc 28076953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 165
Target Start/End: Original strand, 2305545 - 2305617
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatccc 165  Q
    |||||||| |||||||||| ||||||| |||| |||||| || | |||||||||||||||||| |||| ||||    
T  2305545 atgctttgatcccttaacttatttttggatttcattttgatcccctaactataaagtgtctcaatttggtccc 2305617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 165
Target Start/End: Complemental strand, 3666375 - 3666307
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatccc 165  Q
    ||||||||||||||| ||||| | |||| ||||||||| | |||||||||||||||||| |||| ||||    
T  3666375 tttggtcccttaacttattttcggatttcattttggtcccataactataaagtgtctcaatttggtccc 3666307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 165
Target Start/End: Complemental strand, 17179362 - 17179290
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatccc 165  Q
    ||||||||||||||||||| |||||||||||| | |||||| | |||||| |||| ||||||| |||| ||||    
T  17179362 atgctttggtcccttaacttatttttgaatttcaatttggtcccctaactttaaactgtctcaatttggtccc 17179290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 27262718 - 27262794
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    |||||||||||||| |||| |||||||||||| ||||||||| | ||||| ||||  |||||| |||| ||||||||    
T  27262718 atgctttggtccctcaacttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataa 27262794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 165
Target Start/End: Complemental strand, 33837862 - 33837794
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatccc 165  Q
    ||||||||||||||| |||||   ||||||||||||| | ||||||||||||||||||| ||| |||||    
T  33837862 tttggtcccttaacttattttcagattttattttggtcccctaactataaagtgtctcaatttaatccc 33837794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 107 - 169
Target Start/End: Complemental strand, 6209162 - 6209099
Alignment:
Q  107 ttaactaatttttgaattttattttggtc-tctaactataaagtgtctcactttgatcccataa 169  Q
    |||||| ||||||| |||| ||||||||| |||||||||||||||||| | |||| ||||||||    
T  6209162 ttaacttatttttggatttcattttggtcatctaactataaagtgtcttaatttggtcccataa 6209099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 137 - 176
Target Start/End: Original strand, 12958465 - 12958504
Alignment:
Q  137 ctaactataaagtgtctcactttgatcccataaattttct 176  Q
    ||||||||||||||||||| |||| |||||||||||||||    
T  12958465 ctaactataaagtgtctcaatttggtcccataaattttct 12958504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 152
Target Start/End: Complemental strand, 14573919 - 14573860
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtc 152  Q
    ||||||||||||||||||  ||||||| |||| |||||||| | ||||||||||||||||    
T  14573919 atgctttggtcccttaacatatttttggatttcattttggtcccctaactataaagtgtc 14573860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 98 - 176
Target Start/End: Original strand, 37867765 - 37867844
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataaattttct 176  Q
    ||||||||||||||| |||||||  ||| | |||| || | |||||||||||||||||| |||| ||||| |||||||||    
T  37867765 tttggtcccttaacttatttttggttttcaatttgatcccctaactataaagtgtctcaatttggtcccacaaattttct 37867844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 295
Target Start/End: Original strand, 26205126 - 26205219
Alignment:
Q  201 cgttaatttttaacattaaaagactaaagtgaactatatttaaaagtggttcactgtagaccgtattaattttctttaattttaaccatttgatt 295  Q
    ||||| |||||||||| ||| | |||| |||||| ||| ||||||||||| |||  ||  || |||||||||| || ||||||||||||||||||    
T  26205126 cgttagtttttaacatcaaatgtctaaggtgaaccatacttaaaagtggtccaccatatgccttattaatttt-ttaaattttaaccatttgatt 26205219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 155
Target Start/End: Complemental strand, 27657858 - 27657796
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctca 155  Q
    ||||||||||||||||| | ||||||| |||||||||||||| | ||||| |||| |||||||    
T  27657858 atgctttggtcccttaatttatttttggattttattttggtcccttaactttaaattgtctca 27657796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 155
Target Start/End: Complemental strand, 37869147 - 37869089
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctca 155  Q
    ||||||||||||||| |||||||| ||| | ||||||| | ||||||||||||||||||    
T  37869147 tttggtcccttaacttatttttgattttcaatttggtcccttaactataaagtgtctca 37869089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 167
Target Start/End: Complemental strand, 41796055 - 41795989
Alignment:
Q  102 gtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccat 167  Q
    ||||||||||| |||||||| ||| |||||| || | |||||||||||||||||| |||| ||||||    
T  41796055 gtcccttaacttatttttgattttcattttgatcccctaactataaagtgtctcaatttggtcccat 41795989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 178
Target Start/End: Complemental strand, 28109976 - 28109895
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataaattttctgt 178  Q
    ||||||||||||||| ||||||   ||| | ||||||||| |||| ||||||| ||||| |||| |||||||| ||||||||    
T  28109976 tttggtcccttaacttatttttcgttttcaatttggtctcataacgataaagtatctcaatttggtcccataacttttctgt 28109895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 169
Target Start/End: Complemental strand, 42368408 - 42368343
Alignment:
Q  105 ccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    |||||||| ||||||| |||| ||||||||| | |||||||||||||||||  |||| ||||||||    
T  42368408 ccttaacttatttttggatttcattttggtcccctaactataaagtgtctcgatttggtcccataa 42368343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 165
Target Start/End: Original strand, 3254861 - 3254933
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttgg-tctctaactataaagtgtctcactttgatccc 165  Q
    ||||||||||||||||||| ||||| | |||| ||||||| || |||| |||| ||||||||| |||| ||||    
T  3254861 atgctttggtcccttaacttattttcggatttcattttggttccctaattatagagtgtctcaatttggtccc 3254933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 177
Target Start/End: Complemental strand, 12959812 - 12959732
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctct-aactataaagtgtctcactttgatcccataaattttctg 177  Q
    |||||| |||||||| |||||||| ||||| ||||||| || ||| ||||||||||||| |||  ||| |||||| |||||    
T  12959812 tttggttccttaacttatttttgatttttaatttggtcccttaacaataaagtgtctcaatttagtccgataaatcttctg 12959732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 165
Target Start/End: Original strand, 15268386 - 15268458
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatccc 165  Q
    ||||||||||| ||||||| ||||||| |||| |||||| || | |||||||||| ||||||| |||| ||||    
T  15268386 atgctttggtctcttaacttatttttggatttgattttgatcccttaactataaaatgtctcaatttggtccc 15268458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 169
Target Start/End: Original strand, 15808089 - 15808161
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||||| |||||||||||| ||||| ||| | ||||| |||| | ||||| |||| ||||||||    
T  15808089 tttggtcccttaacttatttttgaatttcattttagtcccttaactttaaactatctcaatttggtcccataa 15808161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 15816773 - 15816701
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||| ||||||| |||||||||||| ||||| ||| | ||||| |||| ||||||| |||| ||||||||    
T  15816773 tttggtctcttaacttatttttgaatttcattttcgtcccttaactttaaactgtctcaatttggtcccataa 15816701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 17858691 - 17858619
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||||| |||||||||||| |||||| || | ||||| ||||  |||||| |||| ||||||||    
T  17858691 tttggtcccttaacttatttttgaatttcattttgatcccttaactttaaaccgtctcaatttggtcccataa 17858619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 165
Target Start/End: Complemental strand, 30202990 - 30202922
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatccc 165  Q
    ||||||||||||||| ||||||| |||| | |||||| | |||||| |||| ||||||| |||||||||    
T  30202990 tttggtcccttaacttatttttggatttcaatttggtcccctaactttaaactgtctcaatttgatccc 30202922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 42246596 - 42246672
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    |||||||||||||||||||  ||||||  ||| |||||| || | ||| |||||||||| ||| |||||||||||||    
T  42246596 atgctttggtcccttaacttgtttttggttttcattttgatcccctaattataaagtgtttcaatttgatcccataa 42246672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 42772443 - 42772519
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    |||||||||| |||||||| |||||||||||| |||||| || | ||||| ||||  |||||| |||| ||||||||    
T  42772443 atgctttggttccttaacttatttttgaatttcattttgatcccttaactttaaaccgtctcaatttggtcccataa 42772519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 43019357 - 43019281
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    |||||||| | |||||||| |||||||||||| ||||||||| | ||||| |||  ||||||| |||| ||||||||    
T  43019357 atgctttgattccttaacttatttttgaatttcattttggtcccttaactttaacctgtctcaatttggtcccataa 43019281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 76; Significance: 4e-35; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 98 - 343
Target Start/End: Complemental strand, 40008 - 39762
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataaattttctgtcattatttcttttgatca 196  Q
    ||||||| ||||||| ||||||| |||| | ||||||| | ||| |||||||||||||| |||| |||||||||| |||   |||||  ||||||| ||     
T  40008 tttggtctcttaacttatttttggatttcactttggtcccctaagtataaagtgtctcaatttggtcccataaatcttcccacattacctcttttggtcc 39909  T
Q  197 tcttcgttaatttttaacattaaaagactaaagtgaactatatttaaaagtggttcactgtagaccgtattaattttctttaattttaaccatttgattg 296  Q
    |||  |||| |||||||||| ||||| |||| |||||  ||||||||| |||||||||  | ||||||||||| ||| |||||||||||||||||||||     
T  39908 tctctgttagtttttaacatcaaaagtctaaggtgaatcatatttaaaggtggttcaccatggaccgtattaaattt-tttaattttaaccatttgattt 39810  T
Q  297 att-tttaaaagatgacggttgaattatgtatggtatattatacttta 343  Q
     || |||||||||||||  |||||||||||| ||| |||| |||||||    
T  39809 tttctttaaaagatgaccattgaattatgtagggtctattgtacttta 39762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 211
Target Start/End: Original strand, 22137 - 22250
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctctaactataaagtgtctcactttgatcccataaattttctgtcattatttcttttgatcat 197  Q
    |||| ||||||| || |||||||| ||| | |||| |||||||||||||| ||||||| |||| || ||||||| ||||||| ||   | ||||| ||||    
T  22137 tttgatcccttaccttatttttgattttcactttgatctctaactataaaatgtctcaatttgttcacataaatcttctgtcgtttactattttggtcat 22236  T
Q  198 cttcgttaattttt 211  Q
    || |||||||||||    
T  22237 ctccgttaattttt 22250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 67; Significance: 1e-29; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 98 - 326
Target Start/End: Complemental strand, 37276350 - 37276121
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctct-aactataaagtgtctcactttgatcccataaattttctgtcattatttcttttgatca 196  Q
    ||||||||||||| | |||||||| ||| | |||| || || ||||||||||||||||| |||| |||||||||| || || | ||  || | ||| ||     
T  37276350 tttggtcccttaatttatttttgattttcactttgatcccttaactataaagtgtctcaatttggtcccataaatcttttgccgtttattatattggtcc 37276251  T
Q  197 tcttcgttaatttttaacattaaaagactaaagtgaactatatttaaaagtggttcactgtagaccgtattaattttctttaattttaaccatttgattg 296  Q
    |||  |||| |||||||||| ||||| |||| |||||| ||||||||| |||||||||| |||||| |||||| ||| |||||||||||||||||||||     
T  37276250 tctctgttagtttttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcactatagaccatattaaattt-tttaattttaaccatttgattt 37276152  T
Q  297 att-tttaaaagatgacggttgaattatgta 326  Q
     || ||||||||| |||  ||||||||||||    
T  37276151 tttctttaaaagaggacctttgaattatgta 37276121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 3612694 - 3612618
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||||| |||| ||||||| |||| ||||||||    
T  3612694 atgctttggtcccttaacttatttttgaattttattttggtctcttaactttaaattgtctcaatttggtcccataa 3612618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 186 - 347
Target Start/End: Complemental strand, 44103314 - 44103151
Alignment:
Q  186 tcttttgatcatcttcgttaatttttaacattaaaagactaaagtgaactatatttaaaagtggttcactgtagaccgtattaattttctttaattttaa 285  Q
    ||||||| || ||| ||||| |||||||||| ||| | |||| |||||| || |||||| ||||| |||  ||  || |||||||||| |||||||||||    
T  44103314 tcttttggtcctctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccatatgccttattaattttttttaattttaa 44103215  T
Q  286 ccatttgattgattt--ttaaaagatgacggttgaattatgtatggtatattatactttattgt 347  Q
    ||||||||||  |||  |||||||| ||| ||||||| ||||  ||| |||| |||||||||||    
T  44103214 ccatttgatttttttcattaaaagaagaccgttgaatcatgtggggtctattgtactttattgt 44103151  T

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Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 97 - 169
Target Start/End: Original strand, 19913500 - 19913573
Alignment:
Q  97 ctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatcccataa 169  Q
    |||||||||||||||| |||||||||||| | |||||| ||||||||||||||||| ||| |||| ||||||||    
T  19913500 ctttggtcccttaacttatttttgaatttcaatttggtcctctaactataaagtgtttcaatttggtcccataa 19913573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 203 - 350
Target Start/End: Original strand, 45541599 - 45541741
Alignment:
Q  203 ttaatttttaacattaaaagactaaagtgaactatatttaaaagtggttcactgtagaccgtattaattttctttaattttaaccatttgattgattttt 302  Q
    |||||||||||||| ||||| ||||||||||  |||||| ||||||||||||  | ||  ||||||| ||| |||||||||||| ||||||||  |||||    
T  45541599 ttaatttttaacatcaaaagtctaaagtgaatcatattt-aaagtggttcaccatggaatgtattaaattt-tttaattttaacaatttgattttttttt 45541696  T
Q  303 aaaagatgacggttgaattatgtatggtatattatactttattgtaaa 350  Q
    ||   |||||  |||||||||||| ||| |||| ||||||| ||||||    
T  45541697 aa---atgaccattgaattatgtagggtctattgtactttactgtaaa 45541741  T

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Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 24068335 - 24068411
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||||||||| |||||||  ||| |||||||| | ||||||||||||||||||| |||| ||||||||    
T  24068335 atgctttggtcccttaacttatttttggttttcattttggtcccctaactataaagtgtctcaatttggtcccataa 24068411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 29441621 - 29441697
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||| ||||||| |||||||||||||||||||||| | ||||| |||| ||||||| ||| |||||||||    
T  29441621 atgctttggtctcttaacttatttttgaattttattttggtcccttaactttaaactgtctcaatttaatcccataa 29441697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 177
Target Start/End: Original strand, 37274896 - 37274976
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtc-tctaactataaagtgtctcactttgatcccataaattttctg 177  Q
    |||||| | |||||| ||||||| |||| ||||||||| |||||||||||||||||||| |||| |||||||||| |||||    
T  37274896 tttggttctttaacttatttttggatttcattttggtcctctaactataaagtgtctcaatttgttcccataaatcttctg 37274976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 94 - 165
Target Start/End: Original strand, 45384245 - 45384317
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatccc 165  Q
    ||||||||||||||||||| |||||||||||| ||||| || || |||||||||| ||||||| |||||||||    
T  45384245 atgctttggtcccttaacttatttttgaatttcattttagtcctataactataaaatgtctcaatttgatccc 45384317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 94 - 179
Target Start/End: Original strand, 6843760 - 6843846
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatcccataaattttctgtc 179  Q
    |||||||| |||||||||| ||||| | ||||||||||||| | ||||||||||||||||||| |||| |||| || || |||||||    
T  6843760 atgctttgatcccttaacttattttcggattttattttggtcccctaactataaagtgtctcaatttggtcccctatatcttctgtc 6843846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 98 - 171
Target Start/End: Complemental strand, 16363919 - 16363845
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtc-tctaactataaagtgtctcactttgatcccataaat 171  Q
    ||||||||||||||| |||||||  ||| | ||||||| |||||||||||||| ||||| |||||||||||||||    
T  16363919 tttggtcccttaacttatttttggttttcactttggtcctctaactataaagtatctcaatttgatcccataaat 16363845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 186 - 343
Target Start/End: Original strand, 21670162 - 21670319
Alignment:
Q  186 tcttttgatcatcttcgttaatttttaacattaaaagactaaagtgaactatatttaaaagtggttcactgtagaccgtattaattttctttaattttaa 285  Q
    ||||||| || ||| ||||| |||||||||| |||   |||| |||||| ||||| ||||||||| |||  ||  || |||||||||| |||||||||||    
T  21670162 tcttttggtcttctccgttagtttttaacatcaaatatctaaggtgaaccatattaaaaagtggtccaccatatgccttattaatttt-tttaattttaa 21670260  T
Q  286 ccatttgattgatt-tttaaaagatgacggttgaattatgtatggtatattatacttta 343  Q
    ||||||| ||  || ||||||||| ||| ||||||| ||||  ||| ||||||||||||    
T  21670261 ccatttggttttttctttaaaagaggaccgttgaatcatgtggggtctattatacttta 21670319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 98 - 171
Target Start/End: Complemental strand, 38591114 - 38591040
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataaat 171  Q
    ||||||||||||||| |||||||| ||| | ||||||| | |||||||||||||||||| |||| ||||||||||    
T  38591114 tttggtcccttaacttatttttgattttcaatttggtcccctaactataaagtgtctcaatttggtcccataaat 38591040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 94 - 171
Target Start/End: Complemental strand, 45385905 - 45385827
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataaat 171  Q
    ||||||||||||||||||| ||||||| |||| ||||||||| | ||| |||||||||| ||| |||||||| ||||||    
T  45385905 atgctttggtcccttaacttatttttggatttcattttggtcccataattataaagtgtttcaatttgatcctataaat 45385827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 14820203 - 14820276
Alignment:
Q  99 ttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatcccataaat 171  Q
    |||||||||||||| ||||||| |||||| |||||| | ||||||||||||||||||| |||  ||||||||||    
T  14820203 ttggtcccttaacttatttttggattttaatttggtcccctaactataaagtgtctcaatttagtcccataaat 14820276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 3271165 - 3271241
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||||||||| |||||||||||| ||||||||| | ||||| ||||  |||||| |||| ||||||||    
T  3271165 atgctttggtcccttaacttatttttgaatttcattttggtcccttaactttaaatcgtctcaatttggtcccataa 3271241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 98 - 169
Target Start/End: Original strand, 4675761 - 4675833
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    |||||| |||||||| |||||||||||||||||||||| | ||||| |||| ||||||| |||| ||||||||    
T  4675761 tttggttccttaacttatttttgaattttattttggtcccttaactttaaattgtctcaatttggtcccataa 4675833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 4675989 - 4675913
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    |||||||||||||| |||| |||||||||||||||||||||| | ||||| ||||  |||||| |||| ||||||||    
T  4675989 atgctttggtccctcaacttatttttgaattttattttggtcccttaactttaaaccgtctcaatttggtcccataa 4675913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 21551927 - 21552003
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||||||||| |||||||||||| ||||||||| | ||||| |||| | ||||| |||| ||||||||    
T  21551927 atgctttggtcccttaacttatttttgaatttcattttggtcccttaactttaaactatctcaatttggtcccataa 21552003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 21552973 - 21553049
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||||||||| |||||||||||| ||||||||| | ||||| |||| | ||||| |||| ||||||||    
T  21552973 atgctttggtcccttaacttatttttgaatttcattttggtcccttaactttaaactatctcaatttggtcccataa 21553049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 98 - 216
Target Start/End: Original strand, 117057 - 117176
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataaattttctgtcattatttcttttgatca 196  Q
    |||| |||||||||| |||||||  ||| ||||||||| | ||| |||||| ||| ||| ||||||||||||||| ||||||| ||  || ||||| ||     
T  117057 tttgatcccttaacttatttttggttttcattttggtcccctaattataaaatgtttcaatttgatcccataaatcttctgtcgtttattgttttggtcc 117156  T
Q  197 tcttcgttaatttttaacat 216  Q
    ||| ||||| ||||||||||    
T  117157 tctccgttagtttttaacat 117176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 98 - 204
Target Start/End: Original strand, 38589830 - 38589936
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtc-tctaactataaagtgtctcactttgatcccataaattttctgtcattatttcttttgatca 196  Q
    ||||||||||||||| |||||||  ||| | ||||||| ||||||||||||||| |||| |||| |||||||||| || |||| ||   | |||||||||    
T  38589830 tttggtcccttaacttatttttgt-tttcaatttggtcctctaactataaagtggctcaatttggtcccataaatcttatgtcgtttactattttgatca 38589928  T
Q  197 tcttcgtt 204  Q
    ||||||||    
T  38589929 tcttcgtt 38589936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 343
Target Start/End: Original strand, 13513562 - 13513675
Alignment:
Q  230 tgaactatatttaaaagtggttcactgtagaccgtattaattttctttaattttaaccatttgattgatt-tttaaaagatgacggttgaattatgtatg 328  Q
    ||||| ||||||||||||||| |||  || ||| |||||||||| |||||||||||||||||||||  || ||||||| | ||| ||||||| ||||  |    
T  13513562 tgaaccatatttaaaagtggtccaccatataccttattaatttt-tttaattttaaccatttgattttttctttaaaataggaccgttgaatcatgtgag 13513660  T
Q  329 gtatattatacttta 343  Q
    || |||| |||||||    
T  13513661 gtctattgtacttta 13513675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 343
Target Start/End: Original strand, 13603095 - 13603208
Alignment:
Q  230 tgaactatatttaaaagtggttcactgtagaccgtattaattttctttaattttaaccatttgattgatt-tttaaaagatgacggttgaattatgtatg 328  Q
    ||||| ||||||||||||||| |||  || ||| |||||||||| |||||||||||||||||||||  || ||||||| | ||| ||||||| ||||  |    
T  13603095 tgaaccatatttaaaagtggtccaccatataccttattaatttt-tttaattttaaccatttgattttttctttaaaataggaccgttgaatcatgtgag 13603193  T
Q  329 gtatattatacttta 343  Q
    || |||| |||||||    
T  13603194 gtctattgtacttta 13603208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 97 - 169
Target Start/End: Complemental strand, 24069554 - 24069481
Alignment:
Q  97 ctttggtcccttaactaatttttgaattttattttggtctct-aactataaagtgtctcactttgatcccataa 169  Q
    |||||||||||||||| |||||||  ||| |||||| || || ||||||||||||||||| |||| ||||||||    
T  24069554 ctttggtcccttaacttatttttggttttcattttgatcccttaactataaagtgtctcaatttggtcccataa 24069481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 98 - 254
Target Start/End: Original strand, 36756073 - 36756230
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataaattttctgtcattatttcttttgatca 196  Q
    ||||||||||||||| ||||||   ||||| ||||||| | |||||||||||||| ||| | || || ||||||| || |||| ||   | ||||| |||    
T  36756073 tttggtcccttaacttatttttagtttttaatttggtcccataactataaagtgtttcaatctggtcacataaatcttatgtcgtttactattttggtca 36756172  T
Q  197 tcttcgttaatttttaacattaaaagactaaagtgaactatatttaaaagtggttcac 254  Q
    ||| ||||| |||||||||| |||   |||| |||||  ||||||||| |||||||||    
T  36756173 tctccgttagtttttaacatcaaatttctaaggtgaatcatatttaaaggtggttcac 36756230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 40102226 - 40102267
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtc 135  Q
    ||||||||||||||||||| |||||||||||| |||||||||    
T  40102226 atgctttggtcccttaacttatttttgaatttcattttggtc 40102267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 98 - 174
Target Start/End: Original strand, 41866903 - 41866980
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctct-aactataaagtgtctcactttgatcccataaatttt 174  Q
    ||||||||||||||| |||||||| ||| | |||| || || ||||||||||||| ||| |||| |||||||||||||    
T  41866903 tttggtcccttaacttatttttgattttcactttgatcccttaactataaagtgtttcaatttggtcccataaatttt 41866980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 165
Target Start/End: Complemental strand, 6844684 - 6844612
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttgg-tctctaactataaagtgtctcactttgatccc 165  Q
    ||||||||||||||||||| ||||| | |||| ||||||| || ||||| ||||||||||||| |||| ||||    
T  6844684 atgctttggtcccttaacttattttcggatttcattttggttccctaacaataaagtgtctcaatttggtccc 6844612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 7796918 - 7796842
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtc-tctaactataaagtgtctcactttgatcccataa 169  Q
    |||||||||| |||||||| |||||| | |||||||||| || ||||| |||||||||||||| |||| || |||||    
T  7796918 atgctttggttccttaacttattttttatttttattttgatcatctaattataaagtgtctcaatttggtctcataa 7796842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 7816199 - 7816123
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtc-tctaactataaagtgtctcactttgatcccataa 169  Q
    |||||||| | |||||||| |||||| | |||||||||| || |||||||||||||||||||| |||| || |||||    
T  7816199 atgctttgattccttaacttattttttatttttattttgatcatctaactataaagtgtctcaatttggtctcataa 7816123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 15989009 - 15989085
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||||||||| |||||| ||||| ||||||||| | ||||| ||||  |||||| |||| ||||||||    
T  15989009 atgctttggtcccttaacttatttttaaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataa 15989085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 169
Target Start/End: Original strand, 15989153 - 15989225
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||||| |||||||||||| ||||||||| | ||||| ||||  |||||| |||| ||||||||    
T  15989153 tttggtcccttaacttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataa 15989225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 138
Target Start/End: Complemental strand, 24706323 - 24706279
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctct 138  Q
    ||||||||||||||||||| ||||||| |||| ||||||||||||    
T  24706323 atgctttggtcccttaacttatttttggatttcattttggtctct 24706279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 30865236 - 30865160
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    |||||||||||| |||||| |||||||||||| ||||||||| | ||||| ||||  |||||| |||| ||||||||    
T  30865236 atgctttggtcctttaacttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataa 30865160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 177
Target Start/End: Original strand, 36070227 - 36070267
Alignment:
Q  137 ctaactataaagtgtctcactttgatcccataaattttctg 177  Q
    ||||||||||||||||||| ||||||||||||||| |||||    
T  36070227 ctaactataaagtgtctcaatttgatcccataaatcttctg 36070267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 169
Target Start/End: Original strand, 37472416 - 37472484
Alignment:
Q  102 gtcccttaactaatttttgaattttattttggtc-tctaactataaagtgtctcactttgatcccataa 169  Q
    |||| |||||| |||||||  ||||| ||||||| |||||||||||||||||||| |||| ||||||||    
T  37472416 gtcctttaacttatttttggtttttaatttggtcctctaactataaagtgtctcaatttggtcccataa 37472484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 40103049 - 40102973
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||||||||| |||||||||||| ||||| ||| | ||||| ||||  |||||| |||| ||||||||    
T  40103049 atgctttggtcccttaacttatttttgaatttcattttagtcccttaactttaaaccgtctcaatttggtcccataa 40102973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 165
Target Start/End: Complemental strand, 41178781 - 41178709
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatccc 165  Q
    ||||||||||||||||||| |||||||||||| | |||||| | |||||| |||| ||||||| |||| ||||    
T  41178781 atgctttggtcccttaacttatttttgaatttcaatttggtcccctaactttaaactgtctcaatttgctccc 41178709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 98 - 177
Target Start/End: Original strand, 3237427 - 3237506
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctctaactataaagtgtctcactttgatcccataaattttctg 177  Q
    ||||||||||||||| ||||||| |||| |||| |  | |||||| |||| ||||||| |||| |||||||||| |||||    
T  3237427 tttggtcccttaacttatttttggatttcatttggtcccctaactttaaactgtctcaatttggtcccataaatattctg 3237506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 107 - 169
Target Start/End: Complemental strand, 21552147 - 21552084
Alignment:
Q  107 ttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    |||||| |||||||||||||||||||||| | ||||| ||||  |||||| |||||||||||||    
T  21552147 ttaacttatttttgaattttattttggtcccttaactttaaaccgtctcaatttgatcccataa 21552084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 107 - 169
Target Start/End: Complemental strand, 21553193 - 21553130
Alignment:
Q  107 ttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    |||||| |||||||||||||||||||||| | ||||| ||||  |||||| |||||||||||||    
T  21553193 ttaacttatttttgaattttattttggtcccttaactttaaaccgtctcaatttgatcccataa 21553130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 168
Target Start/End: Complemental strand, 21553819 - 21553744
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccata 168  Q
    |||||||||||||| |||| |||||||||||| ||||||||| | ||||| ||||  |||||| |||| |||||||    
T  21553819 atgctttggtccctcaacttatttttgaatttcattttggtcccataactttaaatcgtctcaatttggtcccata 21553744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 137 - 176
Target Start/End: Complemental strand, 29739710 - 29739671
Alignment:
Q  137 ctaactataaagtgtctcactttgatcccataaattttct 176  Q
    ||||||||||||||||||| |||| |||||||||||||||    
T  29739710 ctaactataaagtgtctcaatttggtcccataaattttct 29739671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 155
Target Start/End: Complemental strand, 7565397 - 7565335
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctca 155  Q
    ||||||||||||||||||| ||||||| |||||| ||||||| | ||||| |||| |||||||    
T  7565397 atgctttggtcccttaacttatttttggattttaatttggtcccttaactttaaattgtctca 7565335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 171
Target Start/End: Original strand, 31623915 - 31623989
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataaat 171  Q
    ||||||||||||||| |||||||  ||| | ||||||| | |||||||||||||| ||| |||| ||||||||||    
T  31623915 tttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtttcaatttggtcccataaat 31623989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 171
Target Start/End: Original strand, 37323357 - 37323431
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatcccataaat 171  Q
    ||||||||||||| | |||||||  ||| | |||||| | ||||||||||| ||||||| |||||||||||||||    
T  37323357 tttggtcccttaatttatttttggttttcaatttggttccctaactataaaatgtctcaatttgatcccataaat 37323431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 155
Target Start/End: Original strand, 24703214 - 24703275
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctctaactataaagtgtctca 155  Q
    |||| |||||||||||||| ||||||| |||| |||||||||  ||||| |||| |||||||    
T  24703214 atgcattggtcccttaacttatttttggatttcattttggtccttaactttaaattgtctca 24703275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 135
Target Start/End: Complemental strand, 39349546 - 39349509
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtc 135  Q
    ||||||||||||||| |||||||||||| |||||||||    
T  39349546 tttggtcccttaacttatttttgaatttcattttggtc 39349509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 174
Target Start/End: Complemental strand, 41867983 - 41867946
Alignment:
Q  137 ctaactataaagtgtctcactttgatcccataaatttt 174  Q
    ||||||||||||||||||| |||| |||||||||||||    
T  41867983 ctaactataaagtgtctcaatttggtcccataaatttt 41867946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 182
Target Start/End: Complemental strand, 4810226 - 4810146
Alignment:
Q  102 gtcccttaactaatttttgaattttattttggtctctaactataaagtgtctcactttgatcccataaattttctgtcatt 182  Q
    ||||||||||| |||||||  ||||| |||||||  ||| |||||| ||||||| ||| || |||||||| || |||||||    
T  4810226 gtcccttaacttatttttggtttttaatttggtccttaattataaaatgtctcaatttaattccataaatcttatgtcatt 4810146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 165
Target Start/End: Original strand, 8502088 - 8502160
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatccc 165  Q
    ||||||||||||||||| | |||||||||||| | |||| | |||||||| |||| ||||||| |||| ||||    
T  8502088 atgctttggtcccttaatttatttttgaatttcaatttgctcctctaactttaaactgtctcaatttggtccc 8502160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 15989377 - 15989305
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||||| ||||||||||||  |||||||| | ||||| ||||  |||||| |||| ||||||||    
T  15989377 tttggtcccttaacttatttttgaatttcgttttggtcccttaactttaaaccgtctcaatttggtcccataa 15989305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 177
Target Start/End: Complemental strand, 35945544 - 35945464
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctct-aactataaagtgtctcactttgatcccataaattttctg 177  Q
    ||||||||||||||| ||||||   ||| ||||| ||| || ||||||||| |||||||||||| ||||||| || |||||    
T  35945544 tttggtcccttaacttattttttgttttcattttagtcccttaactataaaatgtctcactttggtcccatatatcttctg 35945464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 254
Target Start/End: Original strand, 36938795 - 36938847
Alignment:
Q  202 gttaatttttaacattaaaagactaaagtgaactatatttaaaagtggttcac 254  Q
    ||||||||||||||| |||   ||||||||||| ||||||||| |||||||||    
T  36938795 gttaatttttaacatcaaatatctaaagtgaaccatatttaaaggtggttcac 36938847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 98 - 211
Target Start/End: Complemental strand, 48563 - 48449
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtc-tctaactataaagtgtctcactttgatcccataaattttctgtcattatttcttttgatca 196  Q
    ||||||||||||||| ||||||| |||| ||||||||| | |||||||||||||||||| ||||||||||||||| ||||| | ||   ||||||| |||    
T  48563 tttggtcccttaacttatttttggatttcattttggtcctttaactataaagtgtctcaatttgatcccataaatattctgccgtttactcttttggtca 48464  T
Q  197 tcttcgttaattttt 211  Q
    ||| |||||||||||    
T  48463 tctccgttaattttt 48449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 98 - 233
Target Start/End: Original strand, 47079 - 47215
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataaattttctgtcattatttcttttgatca 196  Q
    ||||||||||||||| |||||||||||| |||||| || | ||||| |||| ||||||| |||| |||||||||| ||||  | ||   | ||||| ||     
T  47079 tttggtcccttaacttatttttgaatttcattttgatcccttaactttaaattgtctcaatttggtcccataaatcttcttccgtttactattttggtcc 47178  T
Q  197 tcttcgttaatttttaacattaaaagactaaagtgaa 233  Q
    ||| |||||||||||||| ||||| | |||| |||||    
T  47179 tctccgttaatttttaactttaaatgtctaaggtgaa 47215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 1e-22; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 98 - 211
Target Start/End: Original strand, 27438799 - 27438913
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtc-tctaactataaagtgtctcactttgatcccataaattttctgtcattatttcttttgatca 196  Q
    ||||||||||||||| ||||||| |||| ||||||||| | |||||||||||||||||| ||||||||||||||| ||||| | ||   ||||||| |||    
T  27438799 tttggtcccttaacttatttttggatttcattttggtcctttaactataaagtgtctcaatttgatcccataaatattctgccgtttactcttttggtca 27438898  T
Q  197 tcttcgttaattttt 211  Q
    ||| |||||||||||    
T  27438899 tctccgttaattttt 27438913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 94 - 165
Target Start/End: Original strand, 28225429 - 28225501
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatccc 165  Q
    ||||||||||||||||||| ||||| |||||| |||||||| | ||||||||||||||||||| |||| ||||    
T  28225429 atgctttggtcccttaacttattttcgaatttcattttggtcccctaactataaagtgtctcaatttggtccc 28225501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 94 - 160
Target Start/End: Original strand, 13173042 - 13173109
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttg 160  Q
    ||||||||||||||||||| ||||| | ||||||||||||| | ||||||||||||||||||| ||||    
T  13173042 atgctttggtcccttaacttattttcggattttattttggtcccctaactataaagtgtctcaatttg 13173109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 94 - 160
Target Start/End: Complemental strand, 19368629 - 19368562
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttg 160  Q
    ||||||||||||||||||| ||||| | |||| |||||||| ||||||||||||||||||||| ||||    
T  19368629 atgctttggtcccttaacttattttcggatttcattttggtcctctaactataaagtgtctcaatttg 19368562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 178
Target Start/End: Complemental strand, 33802124 - 33802043
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataaattttctgt 178  Q
    ||||||||||||||| |||||||  ||| | ||||||| | |||||||||||||||| | ||||||||||||||| ||||||    
T  33802124 tttggtcccttaacttatttttggttttcactttggtcccctaactataaagtgtcttaatttgatcccataaatcttctgt 33802043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 12203382 - 12203306
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatcccataa 169  Q
    ||||||| ||||||||||| |||||||||||| |||||||| || ||||| |||| ||||||| |||| ||||||||    
T  12203382 atgctttagtcccttaacttatttttgaatttcattttggtcctttaactttaaactgtctcaatttggtcccataa 12203306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 17916580 - 17916504
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||||||||| |||||||||||| ||||||||| | ||||| |||| ||||||| |||| || |||||    
T  17916580 atgctttggtcccttaacttatttttgaatttcattttggtcccttaactttaaactgtctcaatttggtcacataa 17916504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 94 - 165
Target Start/End: Original strand, 19367722 - 19367794
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatccc 165  Q
    ||||||| ||||||||||| ||||| |||||| |||||||| | ||||||||||||||||||| |||| ||||    
T  19367722 atgctttcgtcccttaacttattttcgaatttcattttggtcccctaactataaagtgtctcaatttggtccc 19367794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 21749913 - 21749837
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||||||||| |||||||||||| ||||||||| | ||||| ||||  |||||| |||| ||||||||    
T  21749913 atgctttggtcccttaacttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataa 21749837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 22298609 - 22298685
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtc-tctaactataaagtgtctcactttgatcccataa 169  Q
    |||||||||||| |||||| |||||||  ||| ||||||||| ||||| | |||||||||||| |||||||||||||    
T  22298609 atgctttggtcctttaacttatttttggttttcattttggtcctctaattttaaagtgtctcagtttgatcccataa 22298685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 94 - 177
Target Start/End: Complemental strand, 22300014 - 22299930
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataaattttctg 177  Q
    |||||||| |||||||||| |||||||  ||| | ||||||| | |||||||||||||||||| |||| |||||||||| |||||    
T  22300014 atgctttgatcccttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtcccataaatcttctg 22299930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 98 - 165
Target Start/End: Original strand, 26581962 - 26582030
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatccc 165  Q
    ||||||||||||||| ||||||| |||||||||||||| | ||||||||||||| |||| |||| ||||    
T  26581962 tttggtcccttaacttatttttggattttattttggtcccttaactataaagtgactcaatttggtccc 26582030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 98 - 233
Target Start/End: Complemental strand, 27440282 - 27440146
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataaattttctgtcattatttcttttgatca 196  Q
    ||||||||||||||| |||||||||||| |||||| || | ||||| |||| ||||||| |||| |||||||||| ||||  | ||   | ||||| ||     
T  27440282 tttggtcccttaacttatttttgaatttcattttgatcccttaactttaaattgtctcaatttggtcccataaatcttcttccgtttactattttggtcc 27440183  T
Q  197 tcttcgttaatttttaacattaaaagactaaagtgaa 233  Q
    ||| |||||||||||||| ||||| | |||| |||||    
T  27440182 tctccgttaatttttaactttaaatgtctaaggtgaa 27440146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 98 - 177
Target Start/End: Original strand, 33807698 - 33807778
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctct-aactataaagtgtctcactttgatcccataaattttctg 177  Q
    |||| |||||||||| |||||||  ||| | ||||||| || ||||||||||||||||| |||||| ||||||||||||||    
T  33807698 tttgatcccttaacttatttttggttttcactttggtcccttaactataaagtgtctcaatttgatgccataaattttctg 33807778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 98 - 160
Target Start/End: Complemental strand, 26584144 - 26584081
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttg 160  Q
    ||||||||||||||| ||||| | ||||||||||||| | ||||||||||||||||||| ||||    
T  26584144 tttggtcccttaacttattttcggattttattttggtcccctaactataaagtgtctcaatttg 26584081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 155
Target Start/End: Complemental strand, 2138744 - 2138686
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctca 155  Q
    ||||||||||||| | ||||||| ||||||||||||| | |||||||||||||||||||    
T  2138744 tttggtcccttaatttatttttggattttattttggtcccctaactataaagtgtctca 2138686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 5999694 - 5999653
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtc 135  Q
    ||||||||||||||||||| |||||||||||| |||||||||    
T  5999694 atgctttggtcccttaacttatttttgaatttcattttggtc 5999653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 19655089 - 19655048
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtc 135  Q
    ||||||||||||||||||| |||||||||||| |||||||||    
T  19655089 atgctttggtcccttaacttatttttgaatttcattttggtc 19655048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 8224449 - 8224373
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||||||||| | |||||||||| ||||||||| | ||||| ||||  |||||| |||| ||||||||    
T  8224449 atgctttggtcccttaacttaattttgaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataa 8224373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 165
Target Start/End: Original strand, 8447226 - 8447298
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatccc 165  Q
    ||||||| ||||||||||| ||||| | |||| |||||||| | ||||||||||||||||||| |||| ||||    
T  8447226 atgctttagtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtccc 8447298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 165
Target Start/End: Original strand, 8456030 - 8456102
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatccc 165  Q
    ||||||| ||||||||||| ||||| | |||| |||||||| | ||||||||||||||||||| |||| ||||    
T  8456030 atgctttagtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtccc 8456102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 12202403 - 12202327
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||||||||| |||||| ||||| ||||||||| | ||||| ||||  |||||| |||| ||||||||    
T  12202403 atgctttggtcccttaacttattttttaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataa 12202327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 33328380 - 33328456
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||||||||| |||||||||||| |||||| || | ||||| ||||  |||||| |||| ||||||||    
T  33328380 atgctttggtcccttaacttatttttgaatttcattttgatcccttaactttaaaccgtctcaatttggtcccataa 33328456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 100 - 170
Target Start/End: Original strand, 9927617 - 9927688
Alignment:
Q  100 tggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataaa 170  Q
    ||||||||||||| ||||||   ||||| ||||||| | |||||||||||||||||| |||| |||||||||    
T  9927617 tggtcccttaacttattttttgtttttagtttggtcccctaactataaagtgtctcaatttggtcccataaa 9927688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 11104488 - 11104447
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtc 135  Q
    |||||||||||| |||||| |||||||||||| |||||||||    
T  11104488 atgctttggtcctttaacttatttttgaatttcattttggtc 11104447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 12202202 - 12202243
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtc 135  Q
    ||||||| ||||||||||| |||||||||||| |||||||||    
T  12202202 atgctttcgtcccttaacttatttttgaatttcattttggtc 12202243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 17915714 - 17915755
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtc 135  Q
    |||||||||||||| |||| |||||||||||| |||||||||    
T  17915714 atgctttggtccctcaacttatttttgaatttcattttggtc 17915755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 165
Target Start/End: Complemental strand, 28226526 - 28226457
Alignment:
Q  97 ctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatccc 165  Q
    ||||| ||| |||||| ||||| | |||| ||||||||| | |||||||||||||||||| |||||||||    
T  28226526 ctttgatccgttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttgatccc 28226457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 169
Target Start/End: Original strand, 31738371 - 31738444
Alignment:
Q  97 ctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    |||||||||||||||| |||||||  ||| | ||||||| | |||||||||||||| ||| |||| ||||||||    
T  31738371 ctttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtttcaatttggtcccataa 31738444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 179
Target Start/End: Complemental strand, 34084239 - 34084159
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctctaactataaagtgtctcactttgatcccataaattttctgtc 179  Q
    ||||||||||||||| |||| ||  ||| | ||||||| |||| |||||||||||||| |||| || ||||||| |||||||    
T  34084239 tttggtcccttaacttatttctggttttcactttggtc-ctaaatataaagtgtctcaatttggtctcataaatcttctgtc 34084159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 21749325 - 21749249
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatcccataa 169  Q
    |||||||| |||||||||| |||||||||||| |||||| | || ||||| ||||  |||||| |||| ||||||||    
T  21749325 atgctttgatcccttaacttatttttgaatttcattttgatcctttaactttaaaccgtctcaatttggtcccataa 21749249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1974 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold1974
Description:

Target: scaffold1974; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 137 - 343
Target Start/End: Complemental strand, 695 - 489
Alignment:
Q  137 ctaactataaagtgtctcactttgatcccataaattttctgtcattatttcttttgatcatcttcgttaatttttaacattaaaagactaaagtgaacta 236  Q
    ||||||||||||||||||| |||  |||||||||| ||||| | ||     ||||| |||||| ||||| |||||||||| ||||  |||| |||||| |    
T  695 ctaactataaagtgtctcaatttagtcccataaatcttctgccgtttaccattttggtcatctccgttagtttttaacataaaaaatctaaggtgaacca 596  T
Q  237 tatttaaaagtggttcactgtagaccgtattaattttctttaattttaaccatttgattgatt-tttaaaagatgacggttgaattatgtatggtatatt 335  Q
    ||||||||  |||||||| ||||| | |||||| ||| | |||||||||||||||||||  || |||||| ||  || ||||||||||||  ||| ||||    
T  595 tatttaaagatggttcaccgtagatcttattaaattt-tctaattttaaccatttgattttttctttaaatgagaaccgttgaattatgtcgggtctatt 497  T
Q  336 atacttta 343  Q
    ||||||||    
T  496 atacttta 489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1878 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold1878
Description:

Target: scaffold1878; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 137 - 343
Target Start/End: Original strand, 579 - 785
Alignment:
Q  137 ctaactataaagtgtctcactttgatcccataaattttctgtcattatttcttttgatcatcttcgttaatttttaacattaaaagactaaagtgaacta 236  Q
    ||||||||||||||||||| |||  |||||||||| ||||| | ||     ||||| |||||| ||||| |||||||||| ||||  |||| |||||| |    
T  579 ctaactataaagtgtctcaatttagtcccataaatcttctgccgtttaccattttggtcatctccgttagtttttaacataaaaaatctaaggtgaacca 678  T
Q  237 tatttaaaagtggttcactgtagaccgtattaattttctttaattttaaccatttgattgatt-tttaaaagatgacggttgaattatgtatggtatatt 335  Q
    ||||||||  |||||||| ||||| | |||||| ||| | |||||||||||||||||||  || |||||| ||  || ||||||||||||  ||| ||||    
T  679 tatttaaagatggttcaccgtagatcttattaaattt-tctaattttaaccatttgattttttctttaaatgagaaccgttgaattatgtcgggtctatt 777  T
Q  336 atacttta 343  Q
    ||||||||    
T  778 atacttta 785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 4e-20; HSPs: 68)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 94 - 171
Target Start/End: Original strand, 18801220 - 18801298
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatcccataaat 171  Q
    ||||||||||||||||||| |||||||||||| |||||||| | ||||||||||||||||||| |||| ||||||||||    
T  18801220 atgctttggtcccttaacttatttttgaatttcattttggtcccctaactataaagtgtctcaatttggtcccataaat 18801298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 94 - 177
Target Start/End: Original strand, 43935190 - 43935274
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatcccataaattttctg 177  Q
    ||||||||||||||||||| ||||||| |||| |||||||| ||||||||||||||||||||| |||| || ||||||| |||||    
T  43935190 atgctttggtcccttaacttatttttggatttcattttggtcctctaactataaagtgtctcaatttggtctcataaatcttctg 43935274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 94 - 171
Target Start/End: Complemental strand, 19848945 - 19848867
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataaat 171  Q
    ||||||||||||||||||| ||||||| |||| ||||||||| | |||||||||||||||||| |||| ||||||||||    
T  19848945 atgctttggtcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataaat 19848867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 94 - 165
Target Start/End: Complemental strand, 48755659 - 48755587
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatccc 165  Q
    ||||||||||||||||||| |||||||||||| |||||||| || |||||||||| ||||||| |||||||||    
T  48755659 atgctttggtcccttaacttatttttgaatttcattttggtcctataactataaaatgtctcaatttgatccc 48755587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 98 - 155
Target Start/End: Original strand, 13446388 - 13446446
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttgg-tctctaactataaagtgtctca 155  Q
    |||||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  13446388 tttggtcctttaacttatttttgaattttattttggttctctaactataaagtgtctca 13446446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 295
Target Start/End: Complemental strand, 24495054 - 24494961
Alignment:
Q  201 cgttaatttttaacattaaaagactaaagtgaactatatttaaaagtggttcactgtagaccgtattaattttctttaattttaaccatttgatt 295  Q
    ||||| |||||||||| ||| | ||||||||||| ||||||||||||||| |||  ||  || |||||||||| |||||||||||||||||||||    
T  24495054 cgttagtttttaacatcaaatgtctaaagtgaaccatatttaaaagtggtccaccatatgccttattaatttt-tttaattttaaccatttgatt 24494961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 94 - 155
Target Start/End: Original strand, 35480213 - 35480274
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctctaactataaagtgtctca 155  Q
    ||||||||||||||||||| ||||| | |||| ||||||||| |||||||||||||||||||    
T  35480213 atgctttggtcccttaacttattttcggatttcattttggtccctaactataaagtgtctca 35480274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 94 - 165
Target Start/End: Original strand, 1884245 - 1884317
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatccc 165  Q
    ||||||||||||||||||| |||||||||||||||||||||| | ||| |||||| ||||||| |||| ||||    
T  1884245 atgctttggtcccttaacttatttttgaattttattttggtcccttaattataaaatgtctcaatttggtccc 1884317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 94 - 165
Target Start/End: Original strand, 38001509 - 38001581
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatccc 165  Q
    ||||||||||||||||||| ||||| |||||| |||||||| ||||||||||||||||| ||| |||| ||||    
T  38001509 atgctttggtcccttaacttattttcgaatttcattttggtcctctaactataaagtgtttcaatttggtccc 38001581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 98 - 176
Target Start/End: Complemental strand, 46458820 - 46458741
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctct-aactataaagtgtctcactttgatcccataaattttct 176  Q
    ||||||||||||| |||||||||| ||| | ||||||| || ||||||||||||||||| |||| |||||||||| ||||    
T  46458820 tttggtcccttaagtaatttttgattttcaatttggtcccttaactataaagtgtctcaatttggtcccataaatcttct 46458741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 98 - 179
Target Start/End: Complemental strand, 19279719 - 19279637
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataaattttctgtc 179  Q
    ||||||||||||||| |||||||  ||| | ||||||| | |||||||||||||||||| |||| ||||||||||||| ||||    
T  19279719 tttggtcccttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtcccataaattttttgtc 19279637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 94 - 195
Target Start/End: Original strand, 41616629 - 41616731
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatcccataaattttctgtcattatttcttttg 192  Q
    ||||||||||||||||||| ||||| | |||| |||||||| | ||||||||||||||||||| |||| |||| ||  | || |||| |||| |||||||    
T  41616629 atgctttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttttgtcgttatctcttttg 41616728  T
Q  193 atc 195  Q
    |||    
T  41616729 atc 41616731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 94 - 175
Target Start/End: Original strand, 45089477 - 45089558
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtc-tctaactataaagtgtctcactttgatcccataaattttc 175  Q
    ||||||| ||||||||||| |||||||  ||| ||||||||| |||| ||||||||||||||| ||| |||||||||||||||    
T  45089477 atgctttcgtcccttaacttatttttggttttcattttggtcctcta-ctataaagtgtctcaatttaatcccataaattttc 45089558  T

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Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 94 - 171
Target Start/End: Original strand, 47163158 - 47163236
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatcccataaat 171  Q
    |||||||| |||||||| | ||||||| ||||||||||||| |||||||||||||||| || | |||| ||||||||||    
T  47163158 atgctttgctcccttaatttatttttggattttattttggtcctctaactataaagtgccttaatttggtcccataaat 47163236  T

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Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 94 - 165
Target Start/End: Complemental strand, 1885352 - 1885280
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatccc 165  Q
    ||||||||||||||||||| |||||||||||| ||||||||| | ||| |||||||| ||||| |||| ||||    
T  1885352 atgctttggtcccttaacttatttttgaatttcattttggtcccttaattataaagtatctcaatttggtccc 1885280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 98 - 169
Target Start/End: Original strand, 19278362 - 19278434
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||||| ||||||| |||| ||||||||| | ||| |||||||||||||| |||| ||||||||    
T  19278362 tttggtcccttaacttatttttggatttcattttggtcccttaattataaagtgtctcaatttggtcccataa 19278434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 29754797 - 29754721
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||||||||| |||||||||||| ||||||||| | ||||| |||| ||||||| |||| | ||||||    
T  29754797 atgctttggtcccttaacttatttttgaatttcattttggtcccttaactttaaactgtctcaatttggttccataa 29754721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 94 - 165
Target Start/End: Original strand, 34557402 - 34557474
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatccc 165  Q
    |||||||||| |||||||| ||||| | ||||||||||||| | ||||||||||||||||||| |||| ||||    
T  34557402 atgctttggttccttaacttattttcggattttattttggtcccctaactataaagtgtctcaatttggtccc 34557474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 94 - 165
Target Start/End: Complemental strand, 36673947 - 36673875
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatccc 165  Q
    ||||||||||||||||||| ||||| | ||||||||||||| | ||||||||||| ||||||| |||| ||||    
T  36673947 atgctttggtcccttaacttattttcggattttattttggtcccctaactataaaatgtctcaatttggtccc 36673875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 94 - 177
Target Start/End: Original strand, 36702782 - 36702866
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataaattttctg 177  Q
    ||||||||||||||||||| ||||||  |||| ||||||||| | ||||| |||| ||||||| |||| |||||||||| |||||    
T  36702782 atgctttggtcccttaacttatttttagatttcattttggtcccttaactttaaactgtctcaatttggtcccataaatattctg 36702866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 37373539 - 37373615
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||||||||| |||||||||||| |||||||| |  ||||| |||| ||||||| ||||||| |||||    
T  37373539 atgctttggtcccttaacttatttttgaatttcattttggtaccttaactttaaactgtctcaatttgatctcataa 37373615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 94 - 209
Target Start/End: Original strand, 41126244 - 41126360
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataaattttctgtcattatttcttttg 192  Q
    ||||||||||||||||||| |||||   |||| ||||||||| | |||||||||||||||||| |||| |||| ||  | ||||||| |||  |||||||    
T  41126244 atgctttggtcccttaacttattttcagatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgtcgttacctcttttg 41126343  T
Q  193 atcatcttcgttaattt 209  Q
     || ||| |||||||||    
T  41126344 gtcctctccgttaattt 41126360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 43704613 - 43704689
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||||||||| |||||||||||| ||||||||| | ||||| ||||  |||||| |||| ||||||||    
T  43704613 atgctttggtcccttaacttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataa 43704689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 47810246 - 47810174
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||||| |||||||||||  ||||||||| | ||||| |||| ||||||| |||||||||||||    
T  47810246 tttggtcccttaacttatttttgaattacattttggtcccttaactttaaactgtctcaatttgatcccataa 47810174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 98 - 176
Target Start/End: Original strand, 25153667 - 25153746
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataaattttct 176  Q
    ||||||||||||||| ||||| || ||| | ||||||| | |||||||||||||||||| |||| |||||||||| ||||    
T  25153667 tttggtcccttaacttattttcgattttcaatttggtcccctaactataaagtgtctcaatttggtcccataaatcttct 25153746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 98 - 160
Target Start/End: Original strand, 33341307 - 33341370
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttg 160  Q
    ||||||| ||||||| ||||||| |||||||||||||||| |||||||||| ||||||| ||||    
T  33341307 tttggtctcttaacttatttttggattttattttggtctcataactataaattgtctcaatttg 33341370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 94 - 152
Target Start/End: Original strand, 38778982 - 38779041
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtc 152  Q
    ||||||||||||||||||  |||||||||||| |||||||| | ||||||||||||||||    
T  38778982 atgctttggtcccttaacatatttttgaatttcattttggtcccctaactataaagtgtc 38779041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 136
Target Start/End: Complemental strand, 35088069 - 35088031
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtct 136  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  35088069 tttggtcccttaacttatttttgaattttattttggtct 35088031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 179
Target Start/End: Complemental strand, 43936247 - 43936165
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatcccataaattttctgtc 179  Q
    ||||||||||||||| ||||||| |||| |||||||| ||||||||||||||| ||| | |||| || ||||| | |||||||    
T  43936247 tttggtcccttaacttatttttggatttcattttggtcctctaactataaagtttcttaatttggtctcataattcttctgtc 43936165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 10338424 - 10338383
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtc 135  Q
    ||||||||||||||||||| |||||||||||| |||||||||    
T  10338424 atgctttggtcccttaacttatttttgaatttcattttggtc 10338383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 18668768 - 18668809
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtc 135  Q
    ||||||||||||||||||| |||||||||||| |||||||||    
T  18668768 atgctttggtcccttaacttatttttgaatttcattttggtc 18668809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 33228852 - 33228893
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtc 135  Q
    ||||||||||||||||||| |||||||||||| |||||||||    
T  33228852 atgctttggtcccttaacttatttttgaatttcattttggtc 33228893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 37725884 - 37725925
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtc 135  Q
    ||||||||||||||||||| |||||||||||| |||||||||    
T  37725884 atgctttggtcccttaacttatttttgaatttcattttggtc 37725925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 40501238 - 40501279
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtc 135  Q
    ||||||||||||||||||| |||||||||||| |||||||||    
T  40501238 atgctttggtcccttaacttatttttgaatttcattttggtc 40501279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 165
Target Start/End: Complemental strand, 1904131 - 1904059
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtct-ctaactataaagtgtctcactttgatccc 165  Q
    ||||||||||||||||||| ||||||| |||| | |||||||| |||||| |||| ||||||| |||| ||||    
T  1904131 atgctttggtcccttaacttatttttggatttcaatttggtctcctaactttaaactgtctcaatttggtccc 1904059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 6772733 - 6772809
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||||||||| |||||||||||  |||||||| || ||||| ||||  |||||| |||| ||||||||    
T  6772733 atgctttggtcccttaacttatttttgaattccattttggtcctttaactttaaaccgtctcaatttggtcccataa 6772809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 138
Target Start/End: Original strand, 8394034 - 8394078
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctct 138  Q
    ||||||||||||||||| | |||||| ||||||||||||||||||    
T  8394034 atgctttggtcccttaatttattttttaattttattttggtctct 8394078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 8439771 - 8439847
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    |||||||| |||||||||| |||||||||||| ||||||||| | ||| | |||| ||||||| |||| ||||||||    
T  8439771 atgctttgatcccttaacttatttttgaatttcattttggtcccttaattgtaaactgtctcaatttggtcccataa 8439847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 17288327 - 17288255
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||||| ||||||   ||| ||||||||| | |||||||||||||||||| |||| ||||||||    
T  17288327 tttggtcccttaacttattttttgttttaattttggtcccctaactataaagtgtctcaatttggtcccataa 17288255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 165
Target Start/End: Original strand, 21171300 - 21171372
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatccc 165  Q
    ||||||||||||||||||| |||||||||||| | |||||| | |||||| |||| ||||||| |||| ||||    
T  21171300 atgctttggtcccttaacttatttttgaatttcaatttggtcccctaactttaaattgtctcaatttggtccc 21171372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 165
Target Start/End: Complemental strand, 30224087 - 30224015
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatccc 165  Q
    ||||||||||||||||||| ||||| | |||| |||||||| | ||||||||||| ||||||| |||| ||||    
T  30224087 atgctttggtcccttaacttattttcggatttcattttggtcccctaactataaattgtctcaatttggtccc 30224015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 32610689 - 32610765
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||||||||| |||||||||||| |||||| || | ||||| ||||  |||||| |||| ||||||||    
T  32610689 atgctttggtcccttaacttatttttgaatttcattttgatcccttaactttaaaccgtctcaatttggtcccataa 32610765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 33229412 - 33229488
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    |||||||||||||| |||| ||||||||||||||||||| || | ||||| ||||  |||||| |||| ||||||||    
T  33229412 atgctttggtccctcaacttatttttgaattttattttgatcccttaactttaaaccgtctcaatttggtcccataa 33229488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 169
Target Start/End: Complemental strand, 33459646 - 33459578
Alignment:
Q  102 gtcccttaactaatttttgaattttattttggtc-tctaactataaagtgtctcactttgatcccataa 169  Q
    ||||| ||||| |||||||  ||| ||||||||| |||||||||||||||||||| |||| ||||||||    
T  33459646 gtcccataacttatttttggttttcattttggtcctctaactataaagtgtctcaatttggtcccataa 33459578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 165
Target Start/End: Complemental strand, 34558412 - 34558340
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatccc 165  Q
    ||||||||||||||||||| ||||| | |||| |||||||| | ||||||||||||| ||||| |||| ||||    
T  34558412 atgctttggtcccttaacttattttcggatttcattttggtcccctaactataaagtatctcaatttggtccc 34558340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 37375205 - 37375129
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    |||||||||||||| |||| |||||||||||| ||||||||| | ||||| ||||  |||||| |||| ||||||||    
T  37375205 atgctttggtccctcaacttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataa 37375129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 153
Target Start/End: Complemental strand, 41618610 - 41618550
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtct 153  Q
    ||||||||||||||||||| ||||||| |||| |||||||| | |||| ||||||||||||    
T  41618610 atgctttggtcccttaacttatttttggatttcattttggtcccctaattataaagtgtct 41618550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 43007756 - 43007684
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtc-tctaactataaagtgtctcactttgatcccataa 169  Q
    |||||||| | |||| |||||||| ||| | ||||||| |||||||||||||||||||| |||| ||||||||    
T  43007756 tttggtccttcaacttatttttgattttcaatttggtcctctaactataaagtgtctcaatttggtcccataa 43007684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 88 - 135
Target Start/End: Complemental strand, 8440009 - 8439962
Alignment:
Q  88 tacatgatgctttggtcccttaactaatttttgaattttattttggtc 135  Q
    ||||||||| |||||||||| |||| |||||||||||| |||||||||    
T  8440009 tacatgatgatttggtccctcaacttatttttgaatttcattttggtc 8439962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 97 - 155
Target Start/End: Complemental strand, 18670611 - 18670552
Alignment:
Q  97 ctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctca 155  Q
    |||||||||||||||| ||||||| |||||||||||||| | ||||| |||| |||||||    
T  18670611 ctttggtcccttaacttatttttggattttattttggtcccttaactttaaaatgtctca 18670552  T

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Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 98 - 176
Target Start/End: Complemental strand, 18802496 - 18802417
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataaattttct 176  Q
    ||||||||||||||| ||||||   ||| |||||| || | |||||||||||||||||| |||  |||||||||||||||    
T  18802496 tttggtcccttaacttattttttgttttcattttgatcccctaactataaagtgtctcaatttagtcccataaattttct 18802417  T

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Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 102 - 176
Target Start/End: Complemental strand, 40926622 - 40926547
Alignment:
Q  102 gtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataaattttct 176  Q
    ||||||||||| |||||||  ||| | ||||||| | |||||||||||||||||| |||| ||| |||||||||||    
T  40926622 gtcccttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtcctataaattttct 40926547  T

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Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 98 - 240
Target Start/End: Original strand, 43930328 - 43930471
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatcccataaattttctgtcattatttcttttgatca 196  Q
    ||||||||||||||| |||||||| ||| | |||||| | |||||||| ||  |||||| |||| ||| |||||| ||||||| ||   | ||||| ||     
T  43930328 tttggtcccttaacttatttttgattttcactttggtcccctaactattaaacgtctcaatttggtcctataaatcttctgtcgtttactattttggtcc 43930427  T
Q  197 tcttcgttaatttttaacattaaaagactaaagtgaactatatt 240  Q
    |||  ||||||||||||| ||||| | |||| ||| ||||||||    
T  43930428 tctctgttaatttttaaccttaaatgtctaaggtggactatatt 43930471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 135
Target Start/End: Complemental strand, 6773498 - 6773460
Alignment:
Q  97 ctttggtcccttaactaatttttgaattttattttggtc 135  Q
    |||||||||||||||| |||||||||||| |||||||||    
T  6773498 ctttggtcccttaacttatttttgaatttcattttggtc 6773460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 171
Target Start/End: Complemental strand, 7347331 - 7347253
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttgg-tctctaactataaagtgtctcactttgatcccataaat 171  Q
    ||||||||||||||||||| | ||||  |||||||||||| ||  ||| |||||||||||||| |||| ||| ||||||    
T  7347331 atgctttggtcccttaacttaattttagattttattttggttccataattataaagtgtctcaatttggtcctataaat 7347253  T

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Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 132
Target Start/End: Original strand, 10338192 - 10338230
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttg 132  Q
    ||||||||||||||||||| |||||||||||| ||||||    
T  10338192 atgctttggtcccttaacttatttttgaatttcattttg 10338230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 290
Target Start/End: Original strand, 11501334 - 11501383
Alignment:
Q  240 ttaaaagtggttcactgtagaccgtattaattttctttaattttaaccatt 290  Q
    |||||||||||||| |||||||| ||||||||||  |||||||||||||||    
T  11501334 ttaaaagtggttcattgtagaccttattaatttt-gttaattttaaccatt 11501383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 155
Target Start/End: Complemental strand, 38408381 - 38408323
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtc-tctaactataaagtgtctca 155  Q
    ||||||||||||| | |||||||| ||| | ||||||| ||||||||||||||||||||    
T  38408381 tttggtcccttaatttatttttgattttcactttggtcctctaactataaagtgtctca 38408323  T

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Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 132
Target Start/End: Original strand, 43705471 - 43705509
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttg 132  Q
    ||||||||||||||||||| |||||||||||| ||||||    
T  43705471 atgctttggtcccttaacttatttttgaatttcattttg 43705509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 7345919 - 7345960
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtc 135  Q
    ||||||||||||||||||| ||||||| |||| |||||||||    
T  7345919 atgctttggtcccttaacttatttttggatttcattttggtc 7345960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 40501566 - 40501525
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtc 135  Q
    ||||||| ||||||||||| |||||||||||| |||||||||    
T  40501566 atgctttagtcccttaacttatttttgaatttcattttggtc 40501525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 169
Target Start/End: Original strand, 47810021 - 47810094
Alignment:
Q  97 ctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||| |||| ||||||||||||||||||| || | ||||| ||||  |||||| |||| ||||||||    
T  47810021 ctttggtccctcaacttatttttgaattttattttgatcccttaactttaaaccgtctcaatttggtcccataa 47810094  T

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Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 165
Target Start/End: Original strand, 2903049 - 2903121
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatccc 165  Q
    |||||||||| |||||||| ||||| | |||| |||||| | || |||||||||||||||||| |||| ||||    
T  2903049 atgctttggtaccttaacttattttcggatttcattttgatttcctaactataaagtgtctcaatttggtccc 2903121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 165
Target Start/End: Complemental strand, 21171597 - 21171525
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatccc 165  Q
    ||||||||||||||||||| ||||||| |||| | |||||| | |||||| |||| ||||||| |||| ||||    
T  21171597 atgctttggtcccttaacttatttttggatttcaatttggtcccctaactttaaattgtctcaatttggtccc 21171525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 32610917 - 32610845
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||| ||| |||||||||||| ||||||||| | ||||| ||||  |||||| |||| ||||||||    
T  32610917 tttggtcccttgacttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataa 32610845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 37374641 - 37374717
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    |||| ||||||||| |||| ||||||||||||||||||| || | ||||| ||||  |||||| |||| ||||||||    
T  37374641 atgcgttggtccctcaacttatttttgaattttattttgatcccttaactttaaaccgtctcaatttggtcccataa 37374717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 165
Target Start/End: Complemental strand, 38002625 - 38002553
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctct-aactataaagtgtctcactttgatccc 165  Q
    ||||||||||| ||||||| |||||   |||| ||||||||| || ||||||||||||||||| |||| ||||    
T  38002625 atgctttggtctcttaacttattttcagatttcattttggtcccttaactataaagtgtctcaatttggtccc 38002553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 134
Target Start/End: Original strand, 47809495 - 47809535
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt 134  Q
    ||||||||||||||||| | |||||||||||| ||||||||    
T  47809495 atgctttggtcccttaatttatttttgaatttcattttggt 47809535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 137 - 295
Target Start/End: Complemental strand, 9545 - 9388
Alignment:
Q  137 ctaactataaagtgtctcactttgatcccataaattttctgtcattatttcttttgatcatcttcgttaatttttaacattaaaagactaaagtgaacta 236  Q
    ||||||||||||||||||| |||  |||||||||| ||||| | ||     ||||| |||||| ||||| |||||||||| ||||  |||| |||||| |    
T  9545 ctaactataaagtgtctcaatttagtcccataaatcttctgccgtttaccattttggtcatctccgttagtttttaacataaaaaatctaaggtgaacca 9446  T
Q  237 tatttaaaagtggttcactgtagaccgtattaattttctttaattttaaccatttgatt 295  Q
    ||||||||  |||||||| ||||| | |||||| ||| | |||||||||||||||||||    
T  9445 tatttaaagatggttcaccgtagatcttattaaattt-tctaattttaaccatttgatt 9388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 94 - 165
Target Start/End: Original strand, 25927 - 25999
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatccc 165  Q
    ||||||||||||||||||| ||||| |||||| |||||||| | ||||||||||||||||||| |||| ||||    
T  25927 atgctttggtcccttaacttattttcgaatttcattttggtcccctaactataaagtgtctcaatttggtccc 25999  T

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Target: scaffold0038; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 165
Target Start/End: Complemental strand, 27024 - 26955
Alignment:
Q  97 ctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatccc 165  Q
    ||||| ||| |||||| ||||| | |||| ||||||||| | |||||||||||||||||| |||||||||    
T  27024 ctttgatccgttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttgatccc 26955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 94 - 160
Target Start/End: Original strand, 5174 - 5241
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttg 160  Q
    ||||||||||||||||||| ||||||| ||||| ||||||| | ||||||||||||||||||| ||||    
T  5174 atgctttggtcccttaacttatttttggattttcttttggtcccctaactataaagtgtctcaatttg 5241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0630 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0630
Description:

Target: scaffold0630; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 165
Target Start/End: Complemental strand, 3163 - 3091
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatccc 165  Q
    |||||||||||| |||||| |||||||||||| ||||||||| | ||||| |||| ||||||| |||| ||||    
T  3163 atgctttggtcctttaacttatttttgaatttcattttggtcccttaactttaaactgtctcaatttggtccc 3091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 2376 - 2300
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatcccataa 169  Q
    ||||||||||||||||||| |||||||  ||| |||||||| | |||| |||||||||| ||| |||| ||||||||    
T  2376 atgctttggtcccttaacttatttttggttttcattttggtcccctaattataaagtgtttcaatttggtcccataa 2300  T

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Target: scaffold0177 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 165
Target Start/End: Original strand, 1760 - 1832
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggt-ctctaactataaagtgtctcactttgatccc 165  Q
    ||||||||||||||||||| ||||| | |||| |||||||| | |||| |||||||||||||| |||| ||||    
T  1760 atgctttggtcccttaacttattttcggatttcattttggtcccctaattataaagtgtctcaatttggtccc 1832  T

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Target: scaffold1827 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold1827
Description:

Target: scaffold1827; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 165
Target Start/End: Complemental strand, 1169 - 1098
Alignment:
Q  94 atgctttggtcccttaactaatttttgaattttattttggtctctaactataaagtgtctcactttgatccc 165  Q
    |||||||| ||| |||||| ||||| | ||||||||| |  ||||||||||||||||||||| |||| ||||    
T  1169 atgctttgatccgttaacttattttcggattttatttggtcctctaactataaagtgtctcaatttggtccc 1098  T

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Target: scaffold0013 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 98 - 176
Target Start/End: Original strand, 96169 - 96248
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataaattttct 176  Q
    |||||||| |||||| ||||| || ||| | ||||||| | |||||||||||||||||| |||||||| |||||| ||||    
T  96169 tttggtccattaacttattttcgattttcaatttggtcccctaactataaagtgtctcaatttgatccgataaatcttct 96248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 171
Target Start/End: Original strand, 12919 - 12993
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataaat 171  Q
    ||||||| ||||||| |||||||| ||||| ||||||| | ||| |||||||||||||| |||| || |||||||    
T  12919 tttggtctcttaacttatttttgatttttactttggtcccataattataaagtgtctcaatttggtctcataaat 12993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 103 - 347
Target Start/End: Complemental strand, 13306 - 13061
Alignment:
Q  103 tcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataaattttctgtcattatttcttttgatcatcttc 201  Q
    |||||||||| |||||||  ||| | ||||||| | |||||||||| ||||||| |||  |||||||| | ||||  | |||  ||||||| || | | |    
T  13306 tcccttaacttatttttggttttcagtttggtcccctaactataaaatgtctcaatttcgtcccataactcttcttccgttacctcttttggtcctatcc 13207  T
Q  202 gttaatttttaacattaaaagactaaagtgaactatatttaaaagtggttcactgtagaccgtattaattttctttaattttaaccatttgattgatt-t 300  Q
     |||  ||||||||| ||| | |||| |||||| |||||||||  |||| |||  || ||| || |||  || |||||| ||||||||||||||  || |    
T  13206 attaggttttaacatcaaatgtctaaggtgaaccatatttaaagatggtccaccatataccctactaaaatt-tttaatcttaaccatttgattttttct 13108  T
Q  301 ttaaaagatgacggttgaattatgtatggtatattatactttattgt 347  Q
    |||||||| ||| |||||||| |||| ||| |||| |||||||||||    
T  13107 ttaaaagaggactgttgaattttgtagggtctattgtactttattgt 13061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 165
Target Start/End: Complemental strand, 20689 - 20621
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttgg-tctctaactataaagtgtctcactttgatccc 165  Q
    ||||||||||||||  |||||||||||||| ||||| || |||||| |||| ||||||| |||| ||||    
T  20689 tttggtcccttaacatatttttgaattttaatttggttccctaactttaaactgtctcaatttggtccc 20621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 177
Target Start/End: Complemental strand, 56807 - 56727
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataaattttctg 177  Q
    ||||||||||||||| ||||||  |||| | ||||||| | ||| |||||||||||||| |||| ||| |||||| |||||    
T  56807 tttggtcccttaacttattttttgatttcactttggtcccctaattataaagtgtctcaatttggtcctataaatcttctg 56727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 169
Target Start/End: Original strand, 28141 - 28213
Alignment:
Q  98 tttggtcccttaactaatttttgaattttattttggtctc-taactataaagtgtctcactttgatcccataa 169  Q
    |||||||||| |||| |||||||||||| ||||||||| | ||||| ||||  |||||| |||| ||||||||    
T  28141 tttggtccctcaacttatttttgaatttcattttggtcccttaactttaaaacgtctcaatttggtcccataa 28213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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