View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15317_high_27 (Length: 286)
Name: NF15317_high_27
Description: NF15317
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15317_high_27 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 286
Target Start/End: Original strand, 455972 - 456256
Alignment:
| Q |
1 |
atcacacattataccttctttcttaccctttggaataaaaataatgacaattaagtatataatcgagtgtttttcttttatacttgggctaaatgtcaaa |
100 |
Q |
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| T |
455972 |
atcacacattataccttctttcttaccctttggaataaaaataatgacaattaagtatataatcgagtgtttttcttttatacttgggctaaatgtcaaa |
456071 |
T |
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| Q |
101 |
actgtataagaaaaaacagtcataacatgaagaaaaataaatgtcatattttattgagagaaaatg-aattaatgtattagataaaaacaaatgctacga |
199 |
Q |
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| T |
456072 |
actgtataagaaaaaacagtcataacatgaagaaaaataaatgtc--attttattgagagaaaatgaaattaatgtattagataaaaacaaatgctacga |
456169 |
T |
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| Q |
200 |
aatactttaaaatatttccannnnnnnnnnggtacaagagaagacaaagcccnnnnnnnccaaactaaaaagataatcaaacattca |
286 |
Q |
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|||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||| |
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| T |
456170 |
aatactttaaaatatttccaatttttttttggtacaagagaaggcaaagcccaaaaaaaccaaactaaaaagataatcaaacattca |
456256 |
T |
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