View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15317_low_12 (Length: 437)

Name: NF15317_low_12
Description: NF15317
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15317_low_12
NF15317_low_12
[»] chr6 (36 HSPs)
chr6 (231-384)||(10540401-10540553)
chr6 (231-343)||(1135001-1135112)
chr6 (231-316)||(234110-234195)
chr6 (54-143)||(10540672-10540762)
chr6 (231-337)||(24163686-24163791)
chr6 (236-337)||(23259297-23259397)
chr6 (231-337)||(10520362-10520467)
chr6 (238-311)||(9940730-9940803)
chr6 (258-343)||(19675081-19675165)
chr6 (258-338)||(24555898-24555977)
chr6 (231-343)||(29713372-29713483)
chr6 (240-311)||(3988741-3988812)
chr6 (243-314)||(31443439-31443510)
chr6 (237-311)||(1502750-1502824)
chr6 (237-311)||(12459316-12459390)
chr6 (237-312)||(17552243-17552319)
chr6 (237-311)||(577142-577217)
chr6 (237-300)||(16128015-16128078)
chr6 (237-311)||(17828364-17828438)
chr6 (237-311)||(20226218-20226292)
chr6 (237-311)||(22120202-22120276)
chr6 (249-302)||(32619831-32619884)
chr6 (237-311)||(13011345-13011416)
chr6 (237-289)||(32193783-32193835)
chr6 (253-308)||(8957865-8957920)
chr6 (253-308)||(8961437-8961492)
chr6 (237-311)||(13503841-13503916)
chr6 (248-311)||(3847744-3847807)
chr6 (241-311)||(21271400-21271469)
chr6 (237-311)||(12322881-12322958)
chr6 (102-141)||(30627289-30627328)
chr6 (253-302)||(18737094-18737143)
chr6 (101-142)||(29713572-29713613)
chr6 (231-266)||(17246678-17246713)
chr6 (273-311)||(32193927-32193965)
chr6 (105-141)||(12063677-12063713)
[»] chr1 (47 HSPs)
chr1 (231-343)||(32806902-32807013)
chr1 (231-337)||(49468681-49468786)
chr1 (231-343)||(31491734-31491845)
chr1 (231-337)||(10842856-10842961)
chr1 (231-333)||(31798665-31798767)
chr1 (231-337)||(5463651-5463756)
chr1 (231-337)||(9915519-9915625)
chr1 (231-338)||(15823110-15823216)
chr1 (236-337)||(52125106-52125206)
chr1 (236-343)||(25151890-25151997)
chr1 (231-337)||(24611489-24611595)
chr1 (231-338)||(46286787-46286893)
chr1 (231-337)||(48009086-48009191)
chr1 (231-343)||(48025218-48025329)
chr1 (237-311)||(25560868-25560942)
chr1 (237-311)||(27209070-27209144)
chr1 (237-311)||(29567977-29568051)
chr1 (231-343)||(35847900-35848008)
chr1 (242-311)||(31699285-31699354)
chr1 (240-343)||(15573696-15573800)
chr1 (251-337)||(38530809-38530894)
chr1 (231-334)||(44108675-44108779)
chr1 (231-337)||(46046049-46046154)
chr1 (236-337)||(43759413-43759513)
chr1 (231-343)||(50094305-50094417)
chr1 (232-337)||(52066260-52066363)
chr1 (236-343)||(1740604-1740711)
chr1 (240-311)||(5225821-5225892)
chr1 (237-311)||(8989635-8989709)
chr1 (236-302)||(34110608-34110674)
chr1 (237-311)||(26595065-26595139)
chr1 (237-311)||(28538285-28538360)
chr1 (237-311)||(46271018-46271093)
chr1 (231-343)||(49426383-49426490)
chr1 (237-311)||(5060-5134)
chr1 (237-311)||(8895011-8895085)
chr1 (237-311)||(18794538-18794612)
chr1 (237-311)||(49900752-49900827)
chr1 (237-311)||(2610828-2610900)
chr1 (275-337)||(43358184-43358245)
chr1 (256-337)||(7214009-7214089)
chr1 (237-294)||(9092674-9092730)
chr1 (238-274)||(26755302-26755338)
chr1 (237-311)||(7191202-7191277)
chr1 (237-276)||(46554879-46554918)
chr1 (264-311)||(44557065-44557112)
chr1 (237-311)||(16757194-16757264)
[»] chr4 (64 HSPs)
chr4 (236-343)||(52957760-52957866)
chr4 (231-337)||(45043564-45043669)
chr4 (236-338)||(52848029-52848130)
chr4 (231-343)||(19878724-19878835)
chr4 (231-343)||(20448115-20448226)
chr4 (231-337)||(37654485-37654591)
chr4 (235-337)||(29370684-29370784)
chr4 (236-337)||(49080453-49080553)
chr4 (231-343)||(2728368-2728479)
chr4 (231-343)||(27653750-27653861)
chr4 (231-337)||(1819638-1819743)
chr4 (231-337)||(53814473-53814578)
chr4 (236-338)||(54042158-54042259)
chr4 (236-337)||(42605653-42605753)
chr4 (236-337)||(44571841-44571941)
chr4 (236-343)||(56373545-56373651)
chr4 (231-337)||(18430065-18430170)
chr4 (231-337)||(40345323-40345428)
chr4 (231-337)||(49089539-49089644)
chr4 (231-343)||(28734674-28734785)
chr4 (239-343)||(41920279-41920382)
chr4 (231-337)||(2493178-2493283)
chr4 (239-337)||(52253932-52254029)
chr4 (236-321)||(19930795-19930880)
chr4 (231-343)||(24940955-24941067)
chr4 (236-343)||(39984898-39985004)
chr4 (236-337)||(50623164-50623265)
chr4 (237-311)||(47817819-47817894)
chr4 (236-337)||(38991739-38991837)
chr4 (237-311)||(52162185-52162259)
chr4 (236-312)||(46392063-46392139)
chr4 (237-311)||(8971123-8971198)
chr4 (232-311)||(34316299-34316378)
chr4 (237-311)||(19451206-19451280)
chr4 (231-337)||(29519501-29519606)
chr4 (237-311)||(30261340-30261414)
chr4 (237-311)||(50203155-50203229)
chr4 (237-311)||(10573156-10573230)
chr4 (235-311)||(44061072-44061149)
chr4 (240-311)||(11364310-11364381)
chr4 (237-311)||(45839718-45839793)
chr4 (258-343)||(40010842-40010926)
chr4 (240-311)||(30780021-30780093)
chr4 (237-307)||(6991268-6991338)
chr4 (237-311)||(44868253-44868327)
chr4 (231-337)||(40837206-40837311)
chr4 (237-311)||(41496286-41496360)
chr4 (237-311)||(44650969-44651043)
chr4 (237-311)||(620177-620253)
chr4 (101-141)||(34124239-34124279)
chr4 (237-311)||(34413548-34413623)
chr4 (237-311)||(56460166-56460241)
chr4 (249-311)||(47458388-47458449)
chr4 (258-311)||(19903204-19903257)
chr4 (237-279)||(25123760-25123802)
chr4 (104-142)||(29519437-29519475)
chr4 (107-141)||(38991678-38991712)
chr4 (107-141)||(50621355-50621389)
chr4 (104-141)||(7905919-7905956)
chr4 (101-142)||(47321350-47321391)
chr4 (238-286)||(9809650-9809698)
chr4 (102-142)||(47817684-47817724)
chr4 (102-142)||(52957959-52957999)
chr4 (100-140)||(55548391-55548431)
[»] chr2 (55 HSPs)
chr2 (231-337)||(38926682-38926787)
chr2 (236-337)||(29396652-29396752)
chr2 (231-343)||(441197-441308)
chr2 (231-343)||(4133098-4133209)
chr2 (231-337)||(12342169-12342274)
chr2 (236-337)||(29808893-29808994)
chr2 (231-316)||(4288703-4288788)
chr2 (236-337)||(6220376-6220476)
chr2 (236-343)||(25383451-25383557)
chr2 (236-338)||(19636589-19636690)
chr2 (236-338)||(19835182-19835283)
chr2 (231-337)||(32227983-32228088)
chr2 (236-337)||(8774134-8774233)
chr2 (236-337)||(8789402-8789501)
chr2 (237-337)||(12393891-12393990)
chr2 (237-311)||(33055972-33056046)
chr2 (237-311)||(37038767-37038841)
chr2 (231-343)||(30855180-30855292)
chr2 (236-337)||(42743110-42743209)
chr2 (242-311)||(43971575-43971644)
chr2 (236-317)||(45081891-45081972)
chr2 (236-312)||(1423272-1423348)
chr2 (236-343)||(34546114-34546221)
chr2 (236-343)||(13562075-13562180)
chr2 (237-344)||(16807482-16807588)
chr2 (237-344)||(16846763-16846869)
chr2 (237-311)||(18719430-18719504)
chr2 (231-337)||(36106375-36106480)
chr2 (231-337)||(42753822-42753928)
chr2 (237-311)||(10195756-10195830)
chr2 (237-302)||(43480876-43480941)
chr2 (236-343)||(42004972-42005077)
chr2 (237-291)||(18579248-18579302)
chr2 (237-295)||(19164438-19164496)
chr2 (237-311)||(4658229-4658305)
chr2 (251-311)||(27964222-27964282)
chr2 (237-308)||(11132632-11132703)
chr2 (234-337)||(18717155-18717257)
chr2 (237-311)||(27726417-27726489)
chr2 (236-311)||(8540118-8540194)
chr2 (240-311)||(7872774-7872845)
chr2 (253-311)||(11188247-11188305)
chr2 (253-311)||(40608603-40608661)
chr2 (237-311)||(12565978-12566052)
chr2 (238-311)||(36685739-36685811)
chr2 (245-302)||(19469613-19469672)
chr2 (100-139)||(6247667-6247706)
chr2 (237-276)||(7028845-7028884)
chr2 (240-311)||(15083162-15083230)
chr2 (249-308)||(33482230-33482289)
chr2 (257-307)||(27726542-27726592)
chr2 (108-141)||(14286127-14286160)
chr2 (237-286)||(29411777-29411826)
chr2 (257-310)||(34455793-34455846)
chr2 (101-141)||(22620250-22620290)
[»] chr7 (52 HSPs)
chr7 (231-343)||(1742067-1742178)
chr7 (231-335)||(22298072-22298175)
chr7 (231-337)||(35777895-35778000)
chr7 (231-343)||(37815800-37815911)
chr7 (231-343)||(42879898-42880009)
chr7 (231-338)||(45948599-45948705)
chr7 (231-337)||(13405097-13405202)
chr7 (231-343)||(23935497-23935608)
chr7 (237-344)||(27947464-27947570)
chr7 (231-338)||(31418482-31418588)
chr7 (256-343)||(10599464-10599550)
chr7 (236-343)||(23155426-23155531)
chr7 (242-337)||(24680215-24680309)
chr7 (231-343)||(44453211-44453320)
chr7 (240-343)||(27935852-27935954)
chr7 (237-311)||(40339540-40339614)
chr7 (236-337)||(29530905-29531005)
chr7 (231-338)||(41137804-41137910)
chr7 (231-337)||(48684799-48684904)
chr7 (231-343)||(45933553-45933663)
chr7 (237-311)||(28289295-28289370)
chr7 (237-311)||(21819364-21819438)
chr7 (236-337)||(36808016-36808115)
chr7 (237-311)||(8293064-8293138)
chr7 (237-311)||(21752107-21752181)
chr7 (237-311)||(29636222-29636296)
chr7 (237-311)||(40753425-40753498)
chr7 (237-302)||(48843633-48843699)
chr7 (237-307)||(1031236-1031306)
chr7 (242-311)||(6563414-6563484)
chr7 (237-311)||(47461370-47461443)
chr7 (237-302)||(7759341-7759406)
chr7 (248-311)||(7335372-7335436)
chr7 (243-311)||(25055869-25055937)
chr7 (232-311)||(37490863-37490943)
chr7 (237-311)||(33939729-33939804)
chr7 (271-337)||(7795213-7795278)
chr7 (237-311)||(10476217-10476291)
chr7 (240-311)||(45499820-45499895)
chr7 (258-311)||(34012559-34012612)
chr7 (251-311)||(19303390-19303450)
chr7 (240-311)||(24133124-24133197)
chr7 (237-280)||(30312539-30312582)
chr7 (237-311)||(31196651-31196723)
chr7 (254-294)||(19105014-19105054)
chr7 (237-311)||(24780314-24780389)
chr7 (242-288)||(4268698-4268744)
chr7 (237-267)||(8604056-8604086)
chr7 (249-294)||(42753800-42753843)
chr7 (238-311)||(7900011-7900084)
chr7 (100-141)||(31929772-31929813)
chr7 (103-140)||(39557272-39557309)
[»] chr3 (53 HSPs)
chr3 (231-338)||(23525284-23525390)
chr3 (236-343)||(44676302-44676408)
chr3 (231-337)||(38016450-38016555)
chr3 (231-337)||(45213691-45213796)
chr3 (236-337)||(33194000-33194100)
chr3 (236-337)||(39359001-39359101)
chr3 (232-337)||(30431197-30431301)
chr3 (236-338)||(38363872-38363973)
chr3 (231-337)||(47895313-47895418)
chr3 (236-336)||(41287466-41287565)
chr3 (231-337)||(2458083-2458189)
chr3 (231-337)||(35557722-35557832)
chr3 (231-337)||(31853531-31853636)
chr3 (231-337)||(45566875-45566980)
chr3 (231-343)||(30426286-30426398)
chr3 (231-336)||(50088286-50088390)
chr3 (236-337)||(53200650-53200750)
chr3 (231-338)||(47138039-47138147)
chr3 (231-337)||(51398086-51398191)
chr3 (236-338)||(11393626-11393727)
chr3 (236-338)||(13756841-13756942)
chr3 (237-311)||(19373667-19373741)
chr3 (240-337)||(36460891-36460986)
chr3 (237-311)||(30315390-30315465)
chr3 (237-311)||(30934804-30934878)
chr3 (231-338)||(36381340-36381448)
chr3 (237-311)||(36844737-36844811)
chr3 (258-337)||(41850485-41850562)
chr3 (231-337)||(3152776-3152880)
chr3 (237-311)||(9189430-9189504)
chr3 (237-311)||(38141031-38141105)
chr3 (234-338)||(45518452-45518555)
chr3 (236-343)||(33024263-33024369)
chr3 (237-311)||(42072066-42072140)
chr3 (236-289)||(36729826-36729879)
chr3 (254-338)||(45391926-45392008)
chr3 (236-319)||(32492168-32492250)
chr3 (272-338)||(36729740-36729805)
chr3 (237-311)||(40487909-40487983)
chr3 (237-311)||(50346706-50346780)
chr3 (238-311)||(8817223-8817296)
chr3 (237-311)||(48903367-48903441)
chr3 (237-302)||(7230898-7230962)
chr3 (251-320)||(39168802-39168871)
chr3 (258-311)||(40717665-40717717)
chr3 (237-294)||(48901801-48901858)
chr3 (236-337)||(51482016-51482117)
chr3 (259-309)||(27067710-27067759)
chr3 (102-141)||(4759487-4759526)
chr3 (237-311)||(3985932-3986006)
chr3 (108-141)||(45213883-45213916)
chr3 (102-142)||(31290880-31290920)
chr3 (103-143)||(37225758-37225798)
[»] chr5 (50 HSPs)
chr5 (231-337)||(2729758-2729863)
chr5 (236-337)||(3305981-3306081)
chr5 (231-343)||(39730022-39730133)
chr5 (231-337)||(42978045-42978150)
chr5 (231-343)||(4425050-4425161)
chr5 (231-343)||(42104029-42104140)
chr5 (236-343)||(14620460-14620566)
chr5 (231-337)||(14005968-14006073)
chr5 (231-337)||(34446000-34446104)
chr5 (236-337)||(39566264-39566364)
chr5 (231-337)||(42661912-42662017)
chr5 (231-343)||(8336373-8336486)
chr5 (231-343)||(39335169-39335281)
chr5 (237-310)||(11977669-11977742)
chr5 (238-311)||(34534441-34534514)
chr5 (231-337)||(6519052-6519158)
chr5 (231-337)||(26660831-26660935)
chr5 (231-337)||(26932424-26932528)
chr5 (231-343)||(21375616-21375728)
chr5 (231-343)||(29807280-29807392)
chr5 (237-311)||(4911112-4911187)
chr5 (237-311)||(843099-843173)
chr5 (237-311)||(14161898-14161972)
chr5 (242-311)||(27797865-27797933)
chr5 (245-338)||(34972621-34972713)
chr5 (237-311)||(7736455-7736529)
chr5 (237-311)||(15167009-15167083)
chr5 (237-311)||(21634193-21634266)
chr5 (237-311)||(21642440-21642513)
chr5 (237-311)||(36164968-36165042)
chr5 (236-337)||(39504804-39504906)
chr5 (237-311)||(38369953-38370027)
chr5 (241-311)||(13974358-13974429)
chr5 (260-315)||(21319305-21319360)
chr5 (237-311)||(1309356-1309430)
chr5 (237-311)||(7721176-7721250)
chr5 (243-308)||(7748898-7748963)
chr5 (258-315)||(13761823-13761880)
chr5 (260-337)||(27600499-27600575)
chr5 (254-294)||(28591641-28591681)
chr5 (259-302)||(7579600-7579643)
chr5 (240-311)||(38362135-38362206)
chr5 (249-311)||(41645330-41645391)
chr5 (102-143)||(42978229-42978270)
chr5 (232-275)||(34208926-34208970)
chr5 (231-266)||(13761633-13761668)
chr5 (282-311)||(9065658-9065687)
chr5 (237-286)||(34382102-34382151)
chr5 (97-141)||(31557241-31557285)
chr5 (108-140)||(34171119-34171151)
[»] chr8 (40 HSPs)
chr8 (236-337)||(40228655-40228755)
chr8 (231-337)||(4760531-4760635)
chr8 (237-343)||(39463340-39463444)
chr8 (231-337)||(39698638-39698743)
chr8 (236-343)||(17921037-17921144)
chr8 (231-338)||(9880472-9880578)
chr8 (236-337)||(7839539-7839639)
chr8 (236-337)||(43448797-43448897)
chr8 (236-337)||(44713615-44713715)
chr8 (236-343)||(4989559-4989665)
chr8 (231-337)||(43084599-43084704)
chr8 (236-321)||(31899235-31899320)
chr8 (237-311)||(6374494-6374568)
chr8 (237-311)||(40399875-40399949)
chr8 (237-311)||(45358892-45358966)
chr8 (243-343)||(29025715-29025814)
chr8 (253-337)||(36669766-36669849)
chr8 (240-338)||(9304605-9304701)
chr8 (237-311)||(34156616-34156690)
chr8 (237-311)||(15750327-15750402)
chr8 (237-311)||(9812254-9812328)
chr8 (237-311)||(14234213-14234287)
chr8 (237-311)||(34796679-34796752)
chr8 (237-311)||(41679393-41679467)
chr8 (237-311)||(514958-515032)
chr8 (237-311)||(13367946-13368020)
chr8 (236-337)||(31693591-31693693)
chr8 (236-338)||(5790617-5790720)
chr8 (231-282)||(19574463-19574514)
chr8 (249-311)||(42179188-42179250)
chr8 (237-311)||(5295403-5295478)
chr8 (237-311)||(13496316-13496393)
chr8 (251-294)||(29312205-29312248)
chr8 (237-311)||(43970049-43970123)
chr8 (231-283)||(19438312-19438365)
chr8 (242-294)||(31233954-31234006)
chr8 (241-311)||(43561408-43561478)
chr8 (259-300)||(6116020-6116061)
chr8 (258-311)||(2375844-2375897)
chr8 (101-142)||(14234382-14234423)
[»] scaffold0294 (1 HSPs)
scaffold0294 (231-344)||(3469-3581)
[»] scaffold0110 (1 HSPs)
scaffold0110 (231-343)||(24706-24817)
[»] scaffold0048 (1 HSPs)
scaffold0048 (236-343)||(62714-62820)
[»] scaffold0565 (2 HSPs)
scaffold0565 (231-321)||(9629-9718)
scaffold0565 (237-311)||(9952-10026)
[»] scaffold0015 (1 HSPs)
scaffold0015 (231-337)||(21053-21158)
[»] scaffold0502 (1 HSPs)
scaffold0502 (237-311)||(569-643)
[»] scaffold0182 (1 HSPs)
scaffold0182 (237-311)||(18252-18326)
[»] scaffold0136 (1 HSPs)
scaffold0136 (240-311)||(9628-9700)
[»] scaffold0983 (1 HSPs)
scaffold0983 (237-311)||(684-758)
[»] scaffold0300 (1 HSPs)
scaffold0300 (237-311)||(4646-4720)
[»] scaffold0026 (1 HSPs)
scaffold0026 (237-311)||(4222-4296)
[»] scaffold2107 (1 HSPs)
scaffold2107 (274-343)||(350-418)
[»] scaffold0007 (1 HSPs)
scaffold0007 (101-142)||(158295-158336)


Alignment Details
Target: chr6 (Bit Score: 114; Significance: 1e-57; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 231 - 384
Target Start/End: Complemental strand, 10540553 - 10540401
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||   |||||||| |||||  |||||||||    
T  10540553 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattatgataatttaataaaattgttatga-tatttgacta 10540455  T
Q  331 ctttattcgattcaaacctctaaaaccctatatgacaattaagtgtaccgtaga 384  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  10540454 ctttattccattcaaacctctaaaaccctatatgacaattgagtgtaccgtaga 10540401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 231 - 343
Target Start/End: Original strand, 1135001 - 1135112
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||| ||||||| |||||||||| |||||| |||||||||    
T  1135001 ctatattacactacttccaaaatattattttttctttaaagaaaaacaaacaaatagttgattaggataatttggtaaaattgatatgac-atttgacta 1135099  T
Q  331 ctttattcgattc 343  Q
    |||||||| ||||    
T  1135100 ctttattccattc 1135112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 231 - 316
Target Start/End: Original strand, 234110 - 234195
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgcta 316  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  234110 ctatgttacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattgcta 234195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 54 - 143
Target Start/End: Complemental strand, 10540762 - 10540672
Alignment:
Q  54 ctaataaacgaaggtgaaact-cctaacaataataatgataattgtcataaataatacttcctcccttttaaaatgagtgtcgttttagct 143  Q
    ||||||||||| ||||||||| |||||||| |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  10540762 ctaataaacgatggtgaaacttcctaacaacaataataataattgtcataaataatacttcctccgttttaaaatgagtgtcgttttagct 10540672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 231 - 337
Target Start/End: Complemental strand, 24163791 - 24163686
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||  ||||||| | ||||||||||||||| |||||||||    
T  24163791 ctatgttacactacttccaaagtattattatttctttaatgaaaaacaaactaatagttgatttggataatttgataaaattgctatgac-atttgacta 24163693  T
Q  331 ctttatt 337  Q
     ||||||    
T  24163692 ttttatt 24163686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 236 - 337
Target Start/End: Complemental strand, 23259397 - 23259297
Alignment:
Q  236 ttacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactacttta 335  Q
    ||||||||||||||||||||||||||||||||| |||||| |||| ||||||||||||| ||||||| |||||||||| || ||| ||||||||||||||    
T  23259397 ttacactacttccaaagtattattttttctttagtgaaaagcaaatcaatagttgattaggataatttggtaaaattgttacgac-atttgactacttta 23259299  T
Q  336 tt 337  Q
    ||    
T  23259298 tt 23259297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 231 - 337
Target Start/End: Complemental strand, 10520467 - 10520362
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||| |||||||||||  ||||||||||||||| |||||||| |||||| |||||| ||||||| ||||||| ||||||||||||||||| |||||||||    
T  10520467 ctatgttacactacttttaaagtattattttttatttaatgagaaacaatccaatatttgattaagataatttggtaaaattgctatgac-atttgacta 10520369  T
Q  331 ctttatt 337  Q
    |||||||    
T  10520368 ctttatt 10520362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 238 - 311
Target Start/End: Original strand, 9940730 - 9940803
Alignment:
Q  238 acactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  9940730 acactacttccaaaatattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 9940803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 258 - 343
Target Start/End: Original strand, 19675081 - 19675165
Alignment:
Q  258 ttttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactactttattcgattc 343  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||| ||||    
T  19675081 ttttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaattgctatgac-atttgactactttattcaattc 19675165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 258 - 338
Target Start/End: Complemental strand, 24555977 - 24555898
Alignment:
Q  258 ttttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactactttattc 338  Q
    |||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||    
T  24555977 ttttttttttaatgaaaaacaaatcaatagttgattatgataatttggtaaaattgctacgac-atttgactactttattc 24555898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 231 - 343
Target Start/End: Complemental strand, 29713483 - 29713372
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||| ||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||| |||||||  |||||||| | || || |||||||||    
T  29713483 ctatgttacactactttcaaagtattattttttctttaataaaaaacaaactaatagttgattaggataattatgtaaaattaccataac-atttgacta 29713385  T
Q  331 ctttattcgattc 343  Q
    ||| |||| ||||    
T  29713384 cttgattccattc 29713372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 240 - 311
Target Start/End: Complemental strand, 3988812 - 3988741
Alignment:
Q  240 actacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  3988812 actatttcaaaagtattattttttctttaatgaaaaacaaacaaatagttgattatgataatttggtaaaat 3988741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 243 - 314
Target Start/End: Complemental strand, 31443510 - 31443439
Alignment:
Q  243 acttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgc 314  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||| |||||||||||    
T  31443510 acttccaaagtattattttttctttaataaaaaacaaatcaatagttgattaggataatttggtaaaattgc 31443439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 237 - 311
Target Start/End: Complemental strand, 1502824 - 1502750
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||||| |||| ||||||| ||||||||    
T  1502824 tacactacttccaaaatattattttttatttaatgaaaaacaaaccaatagttaattaagataatttggtaaaat 1502750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 237 - 311
Target Start/End: Complemental strand, 12459390 - 12459316
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||    
T  12459390 tacattacttccaaagtattgttttttctttaatgaaaaacagaccaatagttgattaggataatttggtaaaat 12459316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 237 - 312
Target Start/End: Complemental strand, 17552319 - 17552243
Alignment:
Q  237 tacactacttccaaagtattatttttt-ctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaatt 312  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||| ||||||| |||||||||    
T  17552319 tacactacttccaaaatattatttttttctttaatgaaaaacaaaccaattgttgattaggataatttggtaaaatt 17552243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 237 - 311
Target Start/End: Original strand, 577142 - 577217
Alignment:
Q  237 tacactacttccaaagtattatttt-ttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||  |||||||    
T  577142 tacactacttccaaattattatttttttctttaatgaaaaacaaaccaatagttgattaggataatttagtaaaat 577217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 237 - 300
Target Start/End: Complemental strand, 16128078 - 16128015
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataa 300  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  16128078 tacactacttcaaaagtattattttttctttaatgaaaaacaaaccgatagttgattaggataa 16128015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 237 - 311
Target Start/End: Original strand, 17828364 - 17828438
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||||| ||| |||||||||| ||||||||||||||||||||||||||| |||||||| ||||||| ||||||||    
T  17828364 tacacttctttcaaagtattactttttctttaatgaaaaacaaaccaatggttgattaagataatttggtaaaat 17828438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 237 - 311
Target Start/End: Complemental strand, 20226292 - 20226218
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||||||||||||| ||||||||| ||||||||||||||||||| |||||||||||||  |||||| ||||||||    
T  20226292 tacactacttccaatgtattatttattctttaatgaaaaacaaatcaatagttgattagtataatttggtaaaat 20226218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 237 - 311
Target Start/End: Complemental strand, 22120276 - 22120202
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||||||||||||| ||||||||| ||||||||||||||||||| |||||||||||||  |||||| ||||||||    
T  22120276 tacactacttccaatgtattatttattctttaatgaaaaacaaatcaatagttgattagtataatttggtaaaat 22120202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 249 - 302
Target Start/End: Complemental strand, 32619884 - 32619831
Alignment:
Q  249 aaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataatt 302  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  32619884 aaagtattattttttctttaatgaaaaacaaatcaatagttgattaagataatt 32619831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 237 - 311
Target Start/End: Complemental strand, 13011416 - 13011345
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||||||||| |||||||||   ||||||||||||||||||||||| ||||||||||| ||||||| ||||||||    
T  13011416 tacactactttcaaagtatt---ttttctttaatgaaaaacaaaccgatagttgattaagataatttggtaaaat 13011345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 237 - 289
Target Start/End: Original strand, 32193783 - 32193835
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagtt 289  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  32193783 tacactacttccaaagtattatcttttctttaatgtaaaacaaaccaatagtt 32193835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 253 - 308
Target Start/End: Original strand, 8957865 - 8957920
Alignment:
Q  253 tattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaa 308  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||    
T  8957865 tattattttttctttaataaaaaacaaaccaatagttgattaggataatttggtaa 8957920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 253 - 308
Target Start/End: Complemental strand, 8961492 - 8961437
Alignment:
Q  253 tattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaa 308  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||    
T  8961492 tattattttttctttaataaaaaacaaaccaatagttgattaggataatttggtaa 8961437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 237 - 311
Target Start/End: Complemental strand, 13503916 - 13503841
Alignment:
Q  237 tacactacttccaaagtattatttttt--ctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||||||||| ||||||||||||||||  ||||||||||||||||| |||||||| |||| ||||||| ||||||||    
T  13503916 tacactactttcaaagtattattttttttctttaatgaaaaacaaa-caatagtttattaggataatttggtaaaat 13503841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 248 - 311
Target Start/End: Original strand, 3847744 - 3847807
Alignment:
Q  248 caaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    ||||| ||||||||||||||||| ||||| ||| ||||||||||||| |||||||| |||||||    
T  3847744 caaaggattattttttctttaattaaaaataaatcaatagttgattaagataattctgtaaaat 3847807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 241 - 311
Target Start/End: Complemental strand, 21271469 - 21271400
Alignment:
Q  241 ctacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    ||||||||||| |||||||||| |||||||||| |||||| ||||||||||||| |||| || ||||||||    
T  21271469 ctacttccaaattattattttt-ctttaatgaagaacaaatcaatagttgattaggatactttggtaaaat 21271400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 237 - 311
Target Start/End: Complemental strand, 12322958 - 12322881
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatga---aaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||||||||||||||||||| | |||||||||||||   |||| ||| |||||||| |||| ||||||| ||||||||    
T  12322958 tacactacttccaaagtattgtgttttctttaatgaaaaaaaaaaaatcaatagttaattaggataatttggtaaaat 12322881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 141
Target Start/End: Complemental strand, 30627328 - 30627289
Alignment:
Q  102 aaataatacttcctcccttttaaaatgagtgtcgttttag 141  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  30627328 aaataatacttcctccgttttaaaatgagtgtcgttttag 30627289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 253 - 302
Target Start/End: Complemental strand, 18737143 - 18737094
Alignment:
Q  253 tattattttttctttaatgaaaaacaaaccaatagttgattatgataatt 302  Q
    |||||||||||||||||||||||| ||| |||||||| |||| |||||||    
T  18737143 tattattttttctttaatgaaaaataaaacaatagttaattaggataatt 18737094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 101 - 142
Target Start/End: Complemental strand, 29713613 - 29713572
Alignment:
Q  101 taaataatacttcctcccttttaaaatgagtgtcgttttagc 142  Q
    ||||||||||||||||| ||||||||| ||||||||||||||    
T  29713613 taaataatacttcctccgttttaaaataagtgtcgttttagc 29713572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 231 - 266
Target Start/End: Complemental strand, 17246713 - 17246678
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctt 266  Q
    |||| |||||||||||||||||||||||||||||||    
T  17246713 ctatgttacactacttccaaagtattattttttctt 17246678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 273 - 311
Target Start/End: Original strand, 32193927 - 32193965
Alignment:
Q  273 aaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||||||||||||||||||||| ||||||| ||||||||    
T  32193927 aaaacaaaccaatagttgattaggataatttggtaaaat 32193965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 105 - 141
Target Start/End: Complemental strand, 12063713 - 12063677
Alignment:
Q  105 taatacttcctcccttttaaaatgagtgtcgttttag 141  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  12063713 taatactccctccctttcaaaatgagtgtcgttttag 12063677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 89; Significance: 9e-43; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 231 - 343
Target Start/End: Complemental strand, 32807013 - 32806902
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  32807013 ctatgttacactactttcaaagtattattttttctttaatgaaaaacaaaccaatagttgattaggataattcggtaaaattgctatgac-atttgacta 32806915  T
Q  331 ctttattcgattc 343  Q
    |||||||| ||||    
T  32806914 ctttattccattc 32806902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 231 - 337
Target Start/End: Complemental strand, 49468786 - 49468681
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||    
T  49468786 ctatattacactacttccaaaggattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattgctatgac-atttgacta 49468688  T
Q  331 ctttatt 337  Q
     ||||||    
T  49468687 ttttatt 49468681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 231 - 343
Target Start/End: Complemental strand, 31491845 - 31491734
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||| ||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  31491845 ctatgttacactactttcaaagtataattttttctttaatgaaaaacaaatcaatagttgattatgataatttggtaaaattgctatgac-atttgacta 31491747  T
Q  331 ctttattcgattc 343  Q
    |||||||| ||||    
T  31491746 ctttattccattc 31491734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 231 - 337
Target Start/End: Original strand, 10842856 - 10842961
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||| |||||||||    
T  10842856 ctatgttacagtacttccaaagtattattttttctttaatgaaaaacaaactaatagttgattaagataatttggtaaaattgctatgac-atttgacta 10842954  T
Q  331 ctttatt 337  Q
    |||||||    
T  10842955 ctttatt 10842961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 231 - 333
Target Start/End: Original strand, 31798665 - 31798767
Alignment:
Q  231 ctatattacactacttccaaagtattatttt-ttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgact 329  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||    
T  31798665 ctatgttacactacttccaaagtattatttttttctttaatgaaaaacaaaccaatagttgattaagataatttggtaaaattgctatgac-atttgact 31798763  T
Q  330 actt 333  Q
    ||||    
T  31798764 actt 31798767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 231 - 337
Target Start/End: Original strand, 5463651 - 5463756
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||| |||||||| |||||||    
T  5463651 ctatgttacactacttccaaaatattattttttctttaatgaaaaacaaaccaatagttgattaggattatttggtaaaattgttatgacaa-ttgacta 5463749  T
Q  331 ctttatt 337  Q
    |||||||    
T  5463750 ctttatt 5463756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 231 - 337
Target Start/End: Original strand, 9915519 - 9915625
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataa-ttcggtaaaattgctatgacaatttgact 329  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| ||||| || ||||||||||||||||| ||||||||    
T  9915519 ctatgttacactacttgcaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttgggtaaaattgctatgac-atttgact 9915617  T
Q  330 actttatt 337  Q
    ||||||||    
T  9915618 actttatt 9915625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 231 - 338
Target Start/End: Original strand, 15823110 - 15823216
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||| |||| ||||    
T  15823110 ctatgttacactactttcaaagtattattttttctttaatgaaaaacaaaccattagttgattaggataatttggtaaaattgctatgac-atttaacta 15823208  T
Q  331 ctttattc 338  Q
     |||||||    
T  15823209 ttttattc 15823216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 236 - 337
Target Start/End: Complemental strand, 52125206 - 52125106
Alignment:
Q  236 ttacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactacttta 335  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||  |||||| ||||||||||||| ||| ||||||||||||||    
T  52125206 ttacactacttccatagtattattttttgtttaatgaaaaacaaaccaatagttgattagaataatttggtaaaattgctacgac-atttgactacttta 52125108  T
Q  336 tt 337  Q
    ||    
T  52125107 tt 52125106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 236 - 343
Target Start/End: Original strand, 25151890 - 25151997
Alignment:
Q  236 ttacactacttccaaagtattattttttctttaatg-aaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactacttt 334  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||  |||||| ||||||||| ||||||| |||||||||||||    
T  25151890 ttacactacttccaaagtattattttttctttaatgaaaaaaaaaaccaatagttgattagtataatttggtaaaattactatgac-atttgactacttt 25151988  T
Q  335 attcgattc 343  Q
    |||| ||||    
T  25151989 attctattc 25151997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 231 - 337
Target Start/End: Complemental strand, 24611595 - 24611489
Alignment:
Q  231 ctatattacactacttccaaagtattatttttt-ctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgact 329  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | |||||  ||||||||| |||||| ||||||||    
T  24611595 ctatgttacactacttccaaagtattatttttttctttaatgaaaaacaaaccaatagttgattagggtaatttagtaaaattgttatgac-atttgact 24611497  T
Q  330 actttatt 337  Q
    ||||||||    
T  24611496 actttatt 24611489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 231 - 338
Target Start/End: Complemental strand, 46286893 - 46286787
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    ||||||||||||| ||  ||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||| ||||| |||    
T  46286893 ctatattacactatttttaaagtatcattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaagtgctatgac-atttgtcta 46286795  T
Q  331 ctttattc 338  Q
    ||||||||    
T  46286794 ctttattc 46286787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 231 - 337
Target Start/End: Original strand, 48009086 - 48009191
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||| ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||| ||||||  |||||||||    
T  48009086 ctatgttacactgcttccaaagtattattttttctttattgaaaaacaaaccaatagttgattaggataatttggtaaaattactatga-tatttgacta 48009184  T
Q  331 ctttatt 337  Q
     ||||||    
T  48009185 ttttatt 48009191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 231 - 343
Target Start/End: Complemental strand, 48025329 - 48025218
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||| ||||||| |||||||||||||  |  |||||||||    
T  48025329 ctatgttacactacttccaaagtattattttttctttaaagaaaaacaaacaaatagtttattaggataatttggtaaaattgcta-caatatttgacta 48025231  T
Q  331 ctttattcgattc 343  Q
    |||||||| ||||    
T  48025230 ctttattccattc 48025218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 237 - 311
Target Start/End: Complemental strand, 25560942 - 25560868
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  25560942 tacactacttccaaaatattattttttctttaatgaaaaacaaactaatagttgattatgataatttggtaaaat 25560868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 237 - 311
Target Start/End: Original strand, 27209070 - 27209144
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||    
T  27209070 tacactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 27209144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 237 - 311
Target Start/End: Original strand, 29567977 - 29568051
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| ||||||||    
T  29567977 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattagaataatttggtaaaat 29568051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 231 - 343
Target Start/End: Complemental strand, 35848008 - 35847900
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||| ||||||||||| ||||||||||||||||||||   |||||||||| ||||||||||||| ||||||| |||||||||| |||||| |||||||||    
T  35848008 ctatgttacactactttcaaagtattattttttcttt---gaaaaacaaatcaatagttgattaagataatttggtaaaattgttatgac-atttgacta 35847913  T
Q  331 ctttattcgattc 343  Q
    |||||||| ||||    
T  35847912 ctttattcaattc 35847900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 242 - 311
Target Start/End: Complemental strand, 31699354 - 31699285
Alignment:
Q  242 tacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  31699354 tacttccaaaatattattttttctttaatgaaaaacaaaccaatagttgattatgataatttggtaaaat 31699285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 240 - 343
Target Start/End: Original strand, 15573696 - 15573800
Alignment:
Q  240 actacttccaaagtattatttt--ttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactactttatt 337  Q
    |||||||||||| |||||||||  |||||||||||||||||||||||||| | |||| ||||||| |||||||||||||| || ||||||||||||||||    
T  15573696 actacttccaaaatattattttttttctttaatgaaaaacaaaccaatagataattaggataatttggtaaaattgctataac-atttgactactttatt 15573794  T
Q  338 cgattc 343  Q
    | ||||    
T  15573795 ccattc 15573800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 251 - 337
Target Start/End: Complemental strand, 38530894 - 38530809
Alignment:
Q  251 agtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactactttatt 337  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||  ||| ||||||||||||||||    
T  38530894 agtattattttttctttaatgaaaaacaaaccaatagttgattaggataatttagtaaaattgctgcgac-atttgactactttatt 38530809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 231 - 334
Target Start/End: Original strand, 44108675 - 44108779
Alignment:
Q  231 ctatattacactacttccaaagtattatttt--ttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgac 328  Q
    |||| ||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||| ||| ||||||| |||||||||| |||||| |||| ||    
T  44108675 ctatgttacaatacttccaaagtattattttttttctttaatgaaaaacaaaccaatagttgtttaggataatttggtaaaattgttatgac-atttaac 44108773  T
Q  329 tacttt 334  Q
    ||||||    
T  44108774 tacttt 44108779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 231 - 337
Target Start/End: Original strand, 46046049 - 46046154
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||| ||||||||||| ||||||||||||| |||||||||||||| ||||  |||||||||||| ||||||| ||||||||||||| |||  ||||||||    
T  46046049 ctatgttacactactttcaaagtattatttattctttaatgaaaatcaaattaatagttgattaggataatttggtaaaattgctacgac-gtttgacta 46046147  T
Q  331 ctttatt 337  Q
    |||||||    
T  46046148 ctttatt 46046154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 236 - 337
Target Start/End: Original strand, 43759413 - 43759513
Alignment:
Q  236 ttacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactacttta 335  Q
    |||||||||||||||| | ||||||||||||||||||||||| || |||||||| |||| ||||||| | |||||||||||| || ||||||||||||||    
T  43759413 ttacactacttccaaaatgttattttttctttaatgaaaaaccaatcaatagttaattaggataatttgataaaattgctattac-atttgactacttta 43759511  T
Q  336 tt 337  Q
    ||    
T  43759512 tt 43759513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 231 - 343
Target Start/End: Original strand, 50094305 - 50094417
Alignment:
Q  231 ctatattacactacttccaaagtattatttt-ttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgact 329  Q
    |||| ||||||||||| ||||||||| |||| |||||||||||||| |||||||||||||||||| ||||||| ||||||||| |||| || |||| |||    
T  50094305 ctatgttacactacttacaaagtattgtttttttctttaatgaaaagcaaaccaatagttgattaggataatttggtaaaattactattac-atttaact 50094403  T
Q  330 actttattcgattc 343  Q
    ||||||||| ||||    
T  50094404 actttattcaattc 50094417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 232 - 337
Target Start/End: Complemental strand, 52066363 - 52066260
Alignment:
Q  232 tatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactac 331  Q
    ||||||||||||||| ||||| ||| |||||| |||||||||||||||| ||||||||||||| ||||||| ||||||||| |||| || ||||||||||    
T  52066363 tatattacactactttcaaag-atttttttttgtttaatgaaaaacaaatcaatagttgattaagataatttggtaaaatttctattac-atttgactac 52066266  T
Q  332 tttatt 337  Q
    ||||||    
T  52066265 tttatt 52066260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 236 - 343
Target Start/End: Complemental strand, 1740711 - 1740604
Alignment:
Q  236 ttacactacttccaaagtattatttttt-ctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactacttt 334  Q
    ||||||||||||||||  |||||||||| ||||||| |||||||||| |||||||||||||||||||| |||||||||| ||| || |||||| ||||||    
T  1740711 ttacactacttccaaaacattatttttttctttaataaaaaacaaactaatagttgattatgataatttggtaaaattgttattac-atttgagtacttt 1740613  T
Q  335 attcgattc 343  Q
    |||| ||||    
T  1740612 attccattc 1740604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 240 - 311
Target Start/End: Complemental strand, 5225892 - 5225821
Alignment:
Q  240 actacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||| |||||||||||| ||||||||    
T  5225892 actacttccaaagtattactttttctttaatgaaaaataaaccaatagttaattatgataatttggtaaaat 5225821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 237 - 311
Target Start/End: Complemental strand, 8989709 - 8989635
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||||||| | |||| ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  8989709 tacactacattcaaaatattattttttctttaatgaaaaacaaaccaatagttgattataataatttggtaaaat 8989635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 236 - 302
Target Start/End: Original strand, 34110608 - 34110674
Alignment:
Q  236 ttacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataatt 302  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  34110608 ttactctactttcaaagtattattttttctttaatgaaaaacaaaccaatagttgattaggataatt 34110674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 237 - 311
Target Start/End: Complemental strand, 26595139 - 26595065
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    ||||||| |||||||| |||| |||||||||||||||||||||||||||| ||||||| ||||||| ||||||||    
T  26595139 tacactatttccaaagaattaatttttctttaatgaaaaacaaaccaataattgattaggataatttggtaaaat 26595065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 237 - 311
Target Start/End: Original strand, 28538285 - 28538360
Alignment:
Q  237 tacactacttccaaagtattatttt-ttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    ||||||| || ||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  28538285 tacactattttcaatgtattatttttttctttaatgaaaaataaaccaatagttgattatgataatttggtaaaat 28538360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 237 - 311
Target Start/End: Complemental strand, 46271093 - 46271018
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaata-gttgattatgataattcggtaaaat 311  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||  ||||||||    
T  46271093 tacacaacttccaaagtattattttttctttaatgaaaaacaaactaatacgttgattacgataatctggtaaaat 46271018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 231 - 343
Target Start/End: Complemental strand, 49426490 - 49426383
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||| |||||||||||||||| |||| ||||||    |||||| |||||||||||||||||||| ||||||| |||||||||| ||| || |||||||||    
T  49426490 ctatgttacactacttccaaaatattttttttt----aatgaagaacaaaccaatagttgattaggataatttggtaaaattgatatcac-atttgacta 49426396  T
Q  331 ctttattcgattc 343  Q
    ||| |||| ||||    
T  49426395 cttcattccattc 49426383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 237 - 311
Target Start/End: Original strand, 5060 - 5134
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||||||||| ||||||||||||||||| | |  |||||||||||||||||||||||| ||||||| ||||||||    
T  5060 tacactactttcaaagtattattttttcatcagcgaaaaacaaaccaatagttgattaggataatttggtaaaat 5134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 237 - 311
Target Start/End: Complemental strand, 8895085 - 8895011
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    ||||||| || |||| ||||||||||| |||||||||||||||| ||||||||||||| ||||||| ||||||||    
T  8895085 tacactattttcaaaatattattttttttttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 8895011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 237 - 311
Target Start/End: Complemental strand, 18794612 - 18794538
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    ||||||||||||||| |||| |||||||||||||| ||||||||| ||||||||||||  |||||| ||||||||    
T  18794612 tacactacttccaaaatattcttttttctttaatggaaaacaaactaatagttgattagaataatttggtaaaat 18794538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 237 - 311
Target Start/End: Complemental strand, 49900827 - 49900752
Alignment:
Q  237 tacactacttccaaagtattatttttt-ctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||||||||| |||||||||||||||| |||||| |||||| ||||||||||||||||| |||||||  |||||||    
T  49900827 tacactactttcaaagtattatttttttctttaaagaaaaataaaccaatagttgattaggataatttagtaaaat 49900752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 237 - 311
Target Start/End: Complemental strand, 2610900 - 2610828
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    ||||||||||||||||||||||||||  |||||||||||| ||||||| | ||||||| ||||| | ||||||||    
T  2610900 tacactacttccaaagtattattttt--tttaatgaaaaataaaccaacaattgattaggataacttggtaaaat 2610828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 43358245 - 43358184
Alignment:
Q  275 aacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactactttatt 337  Q
    ||||| |||||||||||||| ||||||| ||||||||||||||||| ||||||||| ||||||    
T  43358245 aacaacccaatagttgattaagataatttggtaaaattgctatgac-atttgactattttatt 43358184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 256 - 337
Target Start/End: Complemental strand, 7214089 - 7214009
Alignment:
Q  256 tattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactactttatt 337  Q
    ||||| || |||||| |||||||||  ||||||||||||  |||||| ||||||||||||||||  ||||||||||||||||    
T  7214089 tatttcttttttaattaaaaacaaataaatagttgattagaataatttggtaaaattgctatga-tatttgactactttatt 7214009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 9092674 - 9092730
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgatta 294  Q
    ||||||||||| |||||||| ||||||||||||||||||||||| ||||| |||||||    
T  9092674 tacactacttcaaaagtatt-ttttttctttaatgaaaaacaaatcaatatttgatta 9092730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 238 - 274
Target Start/End: Original strand, 26755302 - 26755338
Alignment:
Q  238 acactacttccaaagtattattttttctttaatgaaa 274  Q
    |||||||||||||||||||||||||||||||||||||    
T  26755302 acactacttccaaagtattattttttctttaatgaaa 26755338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 237 - 311
Target Start/End: Complemental strand, 7191277 - 7191202
Alignment:
Q  237 tacactacttccaaagtattatttttt-ctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    ||||||||||  ||| ||||||||||| |||||| |||||| |||| |||||||||||| ||||||| ||||||||    
T  7191277 tacactacttttaaaatattatttttttctttaacgaaaaataaacaaatagttgattaggataatttggtaaaat 7191202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 237 - 276
Target Start/End: Original strand, 46554879 - 46554918
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaa 276  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  46554879 tacactacttccaaagtattattttttctttaataaaaaa 46554918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 311
Target Start/End: Complemental strand, 44557112 - 44557065
Alignment:
Q  264 ctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    ||||||||||||||||||||| |||| |||| ||||||| ||||||||    
T  44557112 ctttaatgaaaaacaaaccaacagtttattaagataatttggtaaaat 44557065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 311
Target Start/End: Complemental strand, 16757264 - 16757194
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    ||||| |||| ||||||||||||||| |||    ||||||||||| |||||||||||| |||| || ||||||||    
T  16757264 tacacaactttcaaagtattatttttcctt----gaaaaacaaactaatagttgattaggatagtttggtaaaat 16757194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 88; Significance: 4e-42; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 236 - 343
Target Start/End: Complemental strand, 52957866 - 52957760
Alignment:
Q  236 ttacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactacttta 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||    
T  52957866 ttacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattgctatgac-atttgactacttta 52957768  T
Q  336 ttcgattc 343  Q
    ||| ||||    
T  52957767 ttccattc 52957760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 231 - 337
Target Start/End: Complemental strand, 45043669 - 45043564
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||    
T  45043669 ctatgttacactacttccaaaatattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattgctatgac-atttgacta 45043571  T
Q  331 ctttatt 337  Q
    |||||||    
T  45043570 ctttatt 45043564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 236 - 338
Target Start/End: Complemental strand, 52848130 - 52848029
Alignment:
Q  236 ttacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactacttta 335  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||    
T  52848130 ttacactacttccaaagtattattttttctttaatgaaaaacaagccaatagttgattaggataatttggtaaaattgctatgac-atttgactacttta 52848032  T
Q  336 ttc 338  Q
    |||    
T  52848031 ttc 52848029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 231 - 343
Target Start/End: Original strand, 19878724 - 19878835
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||| |||||| ||    
T  19878724 ctatgttacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattgctacgac-atttgatta 19878822  T
Q  331 ctttattcgattc 343  Q
    |||||||| ||||    
T  19878823 ctttattccattc 19878835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 231 - 343
Target Start/End: Original strand, 20448115 - 20448226
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||| |||| ||||    
T  20448115 ctatgttacactacttccaaagtattattttttctttaatgaaaatcaaaccaatagttgattaggataatttggtaaaattgctatgac-atttaacta 20448213  T
Q  331 ctttattcgattc 343  Q
    |||||||| ||||    
T  20448214 ctttattcaattc 20448226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 231 - 337
Target Start/End: Original strand, 37654485 - 37654591
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatg-aaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgact 329  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||    
T  37654485 ctatgttacactacttccaaagtattattttttctttaatgaaaaaacaaaccaatagttgattaggataatttggtaaaattgctatgac-atttgact 37654583  T
Q  330 actttatt 337  Q
    ||||||||    
T  37654584 actttatt 37654591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 235 - 337
Target Start/End: Original strand, 29370684 - 29370784
Alignment:
Q  235 attacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactacttt 334  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||    
T  29370684 attacactacttccaaagtattatttt-tctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattgctatgac-atttgactacttt 29370781  T
Q  335 att 337  Q
    |||    
T  29370782 att 29370784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 236 - 337
Target Start/End: Complemental strand, 49080553 - 49080453
Alignment:
Q  236 ttacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactacttta 335  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||    
T  49080553 ttacactacttccgaagtattattttttctttaatgaaaaacaaatcaatagttgattatgataatttggtaaaattactatgac-atttgactacttta 49080455  T
Q  336 tt 337  Q
    ||    
T  49080454 tt 49080453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 231 - 343
Target Start/End: Complemental strand, 2728479 - 2728368
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||||| |||||| |||||||||    
T  2728479 ctatgttatactacttccaaagtattattttttctttaatgaaaaacacaccaatagttgattaggataatttggtaaaattgttatgac-atttgacta 2728381  T
Q  331 ctttattcgattc 343  Q
    |||||||| ||||    
T  2728380 ctttattcaattc 2728368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 231 - 343
Target Start/End: Original strand, 27653750 - 27653861
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||| ||||||| ||||||||||||||||| |||||||||    
T  27653750 ctatgttacactacttccaaaatattattttttctttaatgaaaaacaactcaatagttgattaggataatttggtaaaattgctatgac-atttgacta 27653848  T
Q  331 ctttattcgattc 343  Q
    |||||||| ||||    
T  27653849 ctttattccattc 27653861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 231 - 337
Target Start/End: Original strand, 1819638 - 1819743
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||| ||||||||||||||||| |||||||||    
T  1819638 ctatgttacactactttcaaagtattattttttctttaatgaaaaataaatcaatagttgattaggataatttggtaaaattgctatgac-atttgacta 1819736  T
Q  331 ctttatt 337  Q
    |||||||    
T  1819737 ctttatt 1819743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 231 - 337
Target Start/End: Complemental strand, 53814578 - 53814473
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||| ||||||||||||||||| |||||||||    
T  53814578 ctatgttacactactttcaaagtattattttttctttaatgaaaaacaaatcaataattgattaggataatttggtaaaattgctatgac-atttgacta 53814480  T
Q  331 ctttatt 337  Q
    |||||||    
T  53814479 ctttatt 53814473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 236 - 338
Target Start/End: Complemental strand, 54042259 - 54042158
Alignment:
Q  236 ttacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactacttta 335  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||| ||||||||| ||||    
T  54042259 ttacactacttccaaagtattattatttctttaatgaaaaacaaaccaatagttgattatgataatttgataaaattgctacgac-atttgactatttta 54042161  T
Q  336 ttc 338  Q
    |||    
T  54042160 ttc 54042158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 236 - 337
Target Start/End: Original strand, 42605653 - 42605753
Alignment:
Q  236 ttacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactacttta 335  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||| ||||    
T  42605653 ttacattactttcaaagtattattttttctttaatgaaaaacaaaccaatagttgattaagataatttggtaaaattgctatgac-atttgactatttta 42605751  T
Q  336 tt 337  Q
    ||    
T  42605752 tt 42605753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 236 - 337
Target Start/End: Complemental strand, 44571941 - 44571841
Alignment:
Q  236 ttacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactacttta 335  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||| ||||||| ||||||||| ||||    
T  44571941 ttacactacttccaaagtattattttttctttaatgaaaaataaaccaatagttgattaagataatttggtaaaattactatgac-atttgactatttta 44571843  T
Q  336 tt 337  Q
    ||    
T  44571842 tt 44571841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 236 - 343
Target Start/End: Complemental strand, 56373651 - 56373545
Alignment:
Q  236 ttacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactacttta 335  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||| ||||||| ||||||||||||| ||| ||||||||||||||    
T  56373651 ttacactacttccaaagtattattttttctttaatgaaaaacaaaataattgttgattaggataatttggtaaaattgctacgac-atttgactacttta 56373553  T
Q  336 ttcgattc 343  Q
    ||| ||||    
T  56373552 ttccattc 56373545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 231 - 337
Target Start/End: Original strand, 18430065 - 18430170
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||| ||||||||||| | |||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||| |||||| |||||||||    
T  18430065 ctatgttacactactttctaagtattattttttctttaaagaaaaacaaacgaatagttgattatgataatttggtaaaattgttatgac-atttgacta 18430163  T
Q  331 ctttatt 337  Q
    |||||||    
T  18430164 ctttatt 18430170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 231 - 337
Target Start/End: Complemental strand, 40345428 - 40345323
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||| ||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||| ||||||| |||||||||| |||||| |||||||||    
T  40345428 ctatgttacactacttccaaagtattgtattttctttaataaaaaacaaaccaatagttgattaggataatttggtaaaattgatatgac-atttgacta 40345330  T
Q  331 ctttatt 337  Q
    |||||||    
T  40345329 ctttatt 40345323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 231 - 337
Target Start/End: Original strand, 49089539 - 49089644
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||| |||||  |||||||||    
T  49089539 ctatgttacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattaggataatttagtaaaattgttatga-tatttgacta 49089637  T
Q  331 ctttatt 337  Q
    | |||||    
T  49089638 cattatt 49089644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 231 - 343
Target Start/End: Original strand, 28734674 - 28734785
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| | |||||||  |||||| |||||||||    
T  28734674 ctatgttacactacttgcaaagtattattttttctttaatgaaaaacaaaccaataattgattaggataatttgataaaattattatgac-atttgacta 28734772  T
Q  331 ctttattcgattc 343  Q
    |||||||| ||||    
T  28734773 ctttattcaattc 28734785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 239 - 343
Target Start/End: Complemental strand, 41920382 - 41920279
Alignment:
Q  239 cactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactactttattc 338  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||||| || ||| |||||||| ||||    
T  41920382 cactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattagaataatttggtaaaattgctattac-attcgactacttgattc 41920284  T
Q  339 gattc 343  Q
     ||||    
T  41920283 cattc 41920279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 231 - 337
Target Start/End: Original strand, 2493178 - 2493283
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||| ||||| ||||||||| ||||||| |||||||||||||||||||| |||||||||||||| ||||||  ||||||||||||||||| |||||||||    
T  2493178 ctatgttacattacttccaaggtattatcttttctttaatgaaaaacaacccaatagttgattaggataatctggtaaaattgctatgac-atttgacta 2493276  T
Q  331 ctttatt 337  Q
    |||||||    
T  2493277 ctttatt 2493283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 239 - 337
Target Start/End: Original strand, 52253932 - 52254029
Alignment:
Q  239 cactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactactttatt 337  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||| ||||||| ||||||| ||||||||    
T  52253932 cactacttccaaggtattattttttctttaatgaaaaacagaccaatagttgattaggataatttggtaaaattactatgac-atttgacaactttatt 52254029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 236 - 321
Target Start/End: Original strand, 19930795 - 19930880
Alignment:
Q  236 ttacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgaca 321  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||||    
T  19930795 ttacactacttccaaaatattatttttcctttaatgaaaaacaaaccaatagttgattaagataatttgataaaattgctatgaca 19930880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 231 - 343
Target Start/End: Original strand, 24940955 - 24941067
Alignment:
Q  231 ctatattacactacttccaaagtattatttt-ttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgact 329  Q
    |||| |||||||||||  ||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||| ||||||||    
T  24940955 ctatgttacactactttaaaaatattatttttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattgttatgac-atttgact 24941053  T
Q  330 actttattcgattc 343  Q
    ||||||||| ||||    
T  24941054 actttattccattc 24941067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 236 - 343
Target Start/End: Original strand, 39984898 - 39985004
Alignment:
Q  236 ttacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactacttta 335  Q
    |||||||||||||||||||| ||| |||||||||||||||||||| |||||||||||||  |||||| | ||||||||||||||| ||||||||| ||||    
T  39984898 ttacactacttccaaagtataattgtttctttaatgaaaaacaaatcaatagttgattagaataatttgataaaattgctatgac-atttgactatttta 39984996  T
Q  336 ttcgattc 343  Q
    ||| ||||    
T  39984997 ttcaattc 39985004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 236 - 337
Target Start/End: Original strand, 50623164 - 50623265
Alignment:
Q  236 ttacactacttccaaagtattatttt-ttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactacttt 334  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| | |||||||| |||||| ||||||||||| |    
T  50623164 ttacactacttctaaagtattatttttttctttaatgaaaaacaaaccaatagttgattaggataatttgataaaattgatatgac-atttgactactct 50623262  T
Q  335 att 337  Q
    |||    
T  50623263 att 50623265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 237 - 311
Target Start/End: Original strand, 47817819 - 47817894
Alignment:
Q  237 tacactacttccaaagtattatttt-ttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  47817819 tacactacttccaaagtattatttttttctttaatgaaaaacaaaccaatagttgattatgataaattggtaaaat 47817894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 236 - 337
Target Start/End: Complemental strand, 38991837 - 38991739
Alignment:
Q  236 ttacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactacttta 335  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||  ||||||| ||||||| |||||||||| |||||| |||| |||||||||    
T  38991837 ttacactactttcaaagtattattttttcttgaatgaaaaacaaaccaat--ttgattaggataatttggtaaaattgttatgac-atttaactacttta 38991741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 237 - 311
Target Start/End: Original strand, 52162185 - 52162259
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||    
T  52162185 tacactagttccaaagtattattttttctttaatgaaaaacaaaccaatatttgattaagataatttggtaaaat 52162259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 236 - 312
Target Start/End: Complemental strand, 46392139 - 46392063
Alignment:
Q  236 ttacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaatt 312  Q
    |||||||||||||||||||||||||||| ||||||  |||||||||||||||||||||| ||||||| |||||||||    
T  46392139 ttacactacttccaaagtattattttttatttaatagaaaacaaaccaatagttgattaggataatttggtaaaatt 46392063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 237 - 311
Target Start/End: Original strand, 8971123 - 8971198
Alignment:
Q  237 tacactacttccaaagtattatttt-ttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||| ||||||||    
T  8971123 tacactacttccaaagtattatttttttctttaatgaaaaacaaaccaatagtttattaagataatttggtaaaat 8971198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 232 - 311
Target Start/End: Original strand, 34316299 - 34316378
Alignment:
Q  232 tatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||||| |||||||||||||| |||||| |||||||||||||||||||| ||||||||||||| ||||||| ||||||||    
T  34316299 tatattgcactacttccaaaggattattctttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 34316378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 237 - 311
Target Start/End: Complemental strand, 19451280 - 19451206
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | || || ||||||||    
T  19451280 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaataattgattaggctattttggtaaaat 19451206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 231 - 337
Target Start/End: Complemental strand, 29519606 - 29519501
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||||   ||||| |||||||||| |||||  |||||||||    
T  29519606 ctatgttacactacttctaaagtattattttttctttaatgaaaaacgaaccaatagtttattagagtaatttggtaaaattgttatga-tatttgacta 29519508  T
Q  331 ctttatt 337  Q
     ||||||    
T  29519507 ttttatt 29519501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 237 - 311
Target Start/End: Original strand, 30261340 - 30261414
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||  |||||| ||||||||    
T  30261340 tacattactttcaaagtattattttttctttaatgaaaaacaaaccaatagttgattaaaataatttggtaaaat 30261414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 237 - 311
Target Start/End: Original strand, 50203155 - 50203229
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||| |||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||    
T  50203155 tacattacttcaaaagtattattttttctttaatgaaaaacaaatcaatagttgattatgataatttggtgaaat 50203229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 237 - 311
Target Start/End: Complemental strand, 10573230 - 10573156
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||| ||||||||||||||||||||||| |||||||||| |||| ||||||||||||| ||||||| ||||||||    
T  10573230 tacaatacttccaaagtattattttttcattaatgaaaatcaaatcaatagttgattaggataatttggtaaaat 10573156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 235 - 311
Target Start/End: Original strand, 44061072 - 44061149
Alignment:
Q  235 attacactacttccaaagtattattttttc-tttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||||||||||| |||| |||||||||||  ||||||||||||||||||||||||||||||||||||||  |||||||    
T  44061072 attacactacttgcaaaatattatttttttatttaatgaaaaacaaaccaatagttgattatgataatttagtaaaat 44061149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 240 - 311
Target Start/End: Original strand, 11364310 - 11364381
Alignment:
Q  240 actacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||| || |||| ||||||| ||||||||    
T  11364310 actacttccaaagtattattttctcttcaatgaaaaacaaaccaataattaattaagataatttggtaaaat 11364381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 237 - 311
Target Start/End: Original strand, 45839718 - 45839793
Alignment:
Q  237 tacactacttccaaagtattatttt-ttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||| |||||||||||||||||||| ||||||||||||||||||| |||| |||||||| ||||||| ||||||||    
T  45839718 tacattacttccaaagtattatttttttctttaatgaaaaacaaatcaattgttgattaggataatttggtaaaat 45839793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 258 - 343
Target Start/End: Complemental strand, 40010926 - 40010842
Alignment:
Q  258 ttttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactactttattcgattc 343  Q
    |||||||||||||  |||||||| |||||||| |||| |||||||  |||||||||||||||| ||||||||||||||||| ||||    
T  40010926 ttttttctttaatataaaacaaatcaatagttaattaggataattttgtaaaattgctatgac-atttgactactttattccattc 40010842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 240 - 311
Target Start/End: Complemental strand, 30780093 - 30780021
Alignment:
Q  240 actacttccaaagtattatttttt-ctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    ||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||  |||||||    
T  30780093 actactttcaaagtattatttttttctttaatgaaaaacaaatcaatagttgattaggataatttagtaaaat 30780021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 237 - 307
Target Start/End: Complemental strand, 6991338 - 6991268
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggta 307  Q
    ||||||| || ||||||||||||||||||||||| ||||| |||||||||||||| || ||||||| ||||    
T  6991338 tacactattttcaaagtattattttttctttaataaaaaataaaccaatagttgactaggataatttggta 6991268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 237 - 311
Target Start/End: Complemental strand, 44868327 - 44868253
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||| |||||||||| ||||||||| ||||||||| |||||||| ||||||||||||| || |||| ||||||||    
T  44868327 tacattacttccaaaatattattttatctttaatggaaaacaaatcaatagttgattaggacaatttggtaaaat 44868253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 231 - 337
Target Start/End: Original strand, 40837206 - 40837311
Alignment:
Q  231 ctatattacactacttccaaagt--attattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgac 328  Q
    |||| |||||||||||||||| |  ||| ||||||||||||||||||||||| ||||   |||||| ||||||| ||||||| |||  |||| |||||||    
T  40837206 ctatgttacactacttccaaattttatttttttttctttaatgaaaaacaaatcaatgagtgattaagataatttggtaaaactgc--tgac-atttgac 40837302  T
Q  329 tactttatt 337  Q
    |||||||||    
T  40837303 tactttatt 40837311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 237 - 311
Target Start/End: Original strand, 41496286 - 41496360
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    ||||||||| ||||| |||||||| ||||| ||| |||||||||| |||||||||||| ||||||| ||| ||||    
T  41496286 tacactactcccaaaatattatttattcttcaataaaaaacaaacaaatagttgattaggataatttggtgaaat 41496360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 237 - 311
Target Start/End: Original strand, 44650969 - 44651043
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||||||||| |||| |||||| || |||||||||||||| |||| |||||  ||||||||||||| ||||||||    
T  44650969 tacactactttcaaaatattatattgtctttaatgaaaaataaactaatagccgattatgataatttggtaaaat 44651043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 237 - 311
Target Start/End: Complemental strand, 620253 - 620177
Alignment:
Q  237 tacactacttccaaagtattattttttc--tttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||| ||||||||||||||||||||||   ||||| |||||||||| |||||||||||||  |||||| ||||||||    
T  620253 tacattacttccaaagtattatttttttcttttaaagaaaaacaaatcaatagttgattaaaataatttggtaaaat 620177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 101 - 141
Target Start/End: Original strand, 34124239 - 34124279
Alignment:
Q  101 taaataatacttcctcccttttaaaatgagtgtcgttttag 141  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  34124239 taaataatacttcctccattttaaaatgagtgtcgttttag 34124279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 237 - 311
Target Start/End: Complemental strand, 34413623 - 34413548
Alignment:
Q  237 tacactacttccaaagtattatttttt-ctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    ||||||||||| ||| ||||||||||| |||||||||||||  ||||||||||||||||  ||||||  |||||||    
T  34413623 tacactacttctaaaatattatttttttctttaatgaaaaaagaaccaatagttgattagcataatttagtaaaat 34413548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 237 - 311
Target Start/End: Original strand, 56460166 - 56460241
Alignment:
Q  237 tacactacttccaaagtattattttttc-tttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||  |||| ||||||  ||||||  |||||||    
T  56460166 tacactacttccaaaatattattttttcttttaatgaaaaacaaacttatagctgattagaataatttagtaaaat 56460241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 311
Target Start/End: Complemental strand, 47458449 - 47458388
Alignment:
Q  249 aaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||||||||||||| |||||| |||||||||||  ||||||||||| ||||||| ||||||||    
T  47458449 aaagtattattttt-ctttaacgaaaaacaaacatatagttgattaggataatttggtaaaat 47458388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 258 - 311
Target Start/End: Complemental strand, 19903257 - 19903204
Alignment:
Q  258 ttttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||||||||||||||||||||||||||||||| |||  |||||||  |||||||    
T  19903257 ttttttctttaatgaaaaacaaaccaatagtttattcagataattttgtaaaat 19903204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 237 - 279
Target Start/End: Complemental strand, 25123802 - 25123760
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaa 279  Q
    ||||| ||||||||| ||||||||||||||||| |||||||||    
T  25123802 tacacgacttccaaaatattattttttctttaaagaaaaacaa 25123760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 104 - 142
Target Start/End: Original strand, 29519437 - 29519475
Alignment:
Q  104 ataatacttcctcccttttaaaatgagtgtcgttttagc 142  Q
    |||||||||| ||| ||||||||||||||||||||||||    
T  29519437 ataatacttcatccgttttaaaatgagtgtcgttttagc 29519475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 107 - 141
Target Start/End: Original strand, 38991678 - 38991712
Alignment:
Q  107 atacttcctcccttttaaaatgagtgtcgttttag 141  Q
    ||||||||||| |||||||||||||||||||||||    
T  38991678 atacttcctccgttttaaaatgagtgtcgttttag 38991712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 107 - 141
Target Start/End: Complemental strand, 50621389 - 50621355
Alignment:
Q  107 atacttcctcccttttaaaatgagtgtcgttttag 141  Q
    ||||||||||| |||||||||||||||||||||||    
T  50621389 atacttcctccgttttaaaatgagtgtcgttttag 50621355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 141
Target Start/End: Original strand, 7905919 - 7905956
Alignment:
Q  104 ataatacttcctcccttttaaaatgagtgtcgttttag 141  Q
    |||||||| ||||| |||||||||||||||||||||||    
T  7905919 ataatactccctccgttttaaaatgagtgtcgttttag 7905956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 142
Target Start/End: Complemental strand, 47321391 - 47321350
Alignment:
Q  101 taaataatacttcctcccttttaaaatgagtgtcgttttagc 142  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||    
T  47321391 taaattatactccctccgttttaaaatgagtgtcgttttagc 47321350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 238 - 286
Target Start/End: Complemental strand, 9809698 - 9809650
Alignment:
Q  238 acactacttccaaagtattattttttctttaatgaaaaacaaaccaata 286  Q
    ||||||||| ||||||||||||||| |||||| | ||||| ||||||||    
T  9809698 acactactttcaaagtattatttttactttaaaggaaaactaaccaata 9809650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 102 - 142
Target Start/End: Original strand, 47817684 - 47817724
Alignment:
Q  102 aaataatacttcctcccttttaaaatgagtgtcgttttagc 142  Q
    |||||||||| ||||| ||| ||||||||||||||||||||    
T  47817684 aaataatactccctccgtttcaaaatgagtgtcgttttagc 47817724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 102 - 142
Target Start/End: Complemental strand, 52957999 - 52957959
Alignment:
Q  102 aaataatacttcctcccttttaaaatgagtgtcgttttagc 142  Q
    |||||||||||||||  ||| ||||||||||||||||||||    
T  52957999 aaataatacttcctctgtttcaaaatgagtgtcgttttagc 52957959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 100 - 140
Target Start/End: Complemental strand, 55548431 - 55548391
Alignment:
Q  100 ataaataatacttcctcccttttaaaatgagtgtcgtttta 140  Q
    ||||| |||| ||||||| ||||||||||||||||||||||    
T  55548431 ataaaaaatatttcctccattttaaaatgagtgtcgtttta 55548391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 87; Significance: 1e-41; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 231 - 337
Target Start/End: Original strand, 38926682 - 38926787
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| |||||||||    
T  38926682 ctatgttacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataatttggtaaaattgttatgac-atttgacta 38926780  T
Q  331 ctttatt 337  Q
    |||||||    
T  38926781 ctttatt 38926787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 236 - 337
Target Start/End: Complemental strand, 29396752 - 29396652
Alignment:
Q  236 ttacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactacttta 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||| ||||||||||||||    
T  29396752 ttacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattgctacgac-atttgactacttta 29396654  T
Q  336 tt 337  Q
    ||    
T  29396653 tt 29396652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 231 - 343
Target Start/End: Complemental strand, 441308 - 441197
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||| |||||||||    
T  441308 ctatgttacaccacttccaaagtattattttttctttaatgaaaaacaaaccaatggttgattaggataatttggtaaaattgctatgac-atttgacta 441210  T
Q  331 ctttattcgattc 343  Q
    |||||||| ||||    
T  441209 ctttattccattc 441197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 231 - 343
Target Start/End: Original strand, 4133098 - 4133209
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||| ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||    
T  4133098 ctatgttacactacttccaaagtattattttttccttaaagaaaaacaaaccaatagttgattaggataatttggtaaaattgctatgac-atttgacta 4133196  T
Q  331 ctttattcgattc 343  Q
    |||||||| ||||    
T  4133197 ctttattccattc 4133209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 231 - 337
Target Start/End: Original strand, 12342169 - 12342274
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||| |||||| |||||||||    
T  12342169 ctatgttacactacttccaaaatattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaattgttatgac-atttgacta 12342267  T
Q  331 ctttatt 337  Q
    |||||||    
T  12342268 ctttatt 12342274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 236 - 337
Target Start/End: Original strand, 29808893 - 29808994
Alignment:
Q  236 ttacactacttccaaagtattatttt-ttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactacttt 334  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||| |||||||||||||    
T  29808893 ttacactacttccaaagtattatttttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattgctacgac-atttgactacttt 29808991  T
Q  335 att 337  Q
    |||    
T  29808992 att 29808994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 231 - 316
Target Start/End: Complemental strand, 4288788 - 4288703
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgcta 316  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||    
T  4288788 ctatgttacactacttccaaagtattattttttctttaatgaaaaacaaactaatagttgattaggataatttggtaaaattgcta 4288703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 236 - 337
Target Start/End: Complemental strand, 6220476 - 6220376
Alignment:
Q  236 ttacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactacttta 335  Q
    |||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||| ||||||| | ||||||||||||||| ||||||||||||||    
T  6220476 ttacactacttccaaattattattttctttttaatgaaaaacaaaccaatagttgattaggataatttgataaaattgctatgac-atttgactacttta 6220378  T
Q  336 tt 337  Q
    ||    
T  6220377 tt 6220376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 236 - 343
Target Start/End: Complemental strand, 25383557 - 25383451
Alignment:
Q  236 ttacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactacttta 335  Q
    ||||||||||| |||||||||| | |||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||  ||||||||||||||    
T  25383557 ttacactactttcaaagtattactatttctttaatgaaaaacaaatcaatagttgattaagataatttggtaaaattgctatga-tatttgactacttta 25383459  T
Q  336 ttcgattc 343  Q
    ||| ||||    
T  25383458 ttccattc 25383451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 236 - 338
Target Start/End: Original strand, 19636589 - 19636690
Alignment:
Q  236 ttacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactacttta 335  Q
    |||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| | |||||||| |||||| ||||||||||||||    
T  19636589 ttacactattttcaaagtattattttttctttaatgaaaaataaaccaatagttgattaggataatttgataaaattgttatgac-atttgactacttta 19636687  T
Q  336 ttc 338  Q
    |||    
T  19636688 ttc 19636690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 236 - 338
Target Start/End: Original strand, 19835182 - 19835283
Alignment:
Q  236 ttacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactacttta 335  Q
    |||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| | |||||||| |||||| ||||||||||||||    
T  19835182 ttacactattttcaaagtattattttttctttaatgaaaaataaaccaatagttgattaggataatttgataaaattgttatgac-atttgactacttta 19835280  T
Q  336 ttc 338  Q
    |||    
T  19835281 ttc 19835283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 231 - 337
Target Start/End: Complemental strand, 32228088 - 32227983
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||| ||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||| |||||| |||||| ||    
T  32228088 ctatgttacaatactttcaaagtattattttttctttaatgaaaaacaacccaatagttgattaggataatttggtaaaattgttatgac-atttgaata 32227990  T
Q  331 ctttatt 337  Q
    |||||||    
T  32227989 ctttatt 32227983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 236 - 337
Target Start/End: Original strand, 8774134 - 8774233
Alignment:
Q  236 ttacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactacttta 335  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||| |||||||||| |||||| ||||||||| ||||    
T  8774134 ttacactacttccaaagtattatttt-tctttaatgaaaaataaaccaatagttgattaggataatttggtaaaattgttatgac-atttgactatttta 8774231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 236 - 337
Target Start/End: Complemental strand, 8789501 - 8789402
Alignment:
Q  236 ttacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactacttta 335  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||| |||||||||| |||||| ||||||||| ||||    
T  8789501 ttacactacttccaaagtattattttt-ctttaatgaaaaataaaccaatagttgattaggataatttggtaaaattgttatgac-atttgactatttta 8789404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 237 - 337
Target Start/End: Complemental strand, 12393990 - 12393891
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactactttat 336  Q
    ||||||| || ||||||| |||||||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||| |||| ||||||||||    
T  12393990 tacactattttcaaagtaatattttttctttaatgaaaaacaaactaatagttgattaggataatttggtaaaattgctatgac-atttaactactttat 12393892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 237 - 311
Target Start/End: Original strand, 33055972 - 33056046
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  33055972 tacactactttcaatgtattattttttctttaatgaaaaacaaaccaatagttgattatgataatttggtaaaat 33056046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 237 - 311
Target Start/End: Complemental strand, 37038841 - 37038767
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  37038841 tacactactttcaaagtattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 37038767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 231 - 343
Target Start/End: Original strand, 30855180 - 30855292
Alignment:
Q  231 ctatattacactacttccaaagtattatttt-ttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgact 329  Q
    |||| ||||||||||||||||  |||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||| || ||| ||||||||    
T  30855180 ctatgttacactacttccaaaacattatttttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattgttaagac-atttgact 30855278  T
Q  330 actttattcgattc 343  Q
    | ||||||| ||||    
T  30855279 attttattcaattc 30855292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 236 - 337
Target Start/End: Original strand, 42743110 - 42743209
Alignment:
Q  236 ttacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactacttta 335  Q
    ||||||||||| ||||||||| ||||||||||||| ||||||||| ||||| ||||||| ||||||| ||||||||||||||||| ||||||||||||||    
T  42743110 ttacactactttcaaagtatt-ttttttctttaataaaaaacaaatcaataattgattaggataatttggtaaaattgctatgac-atttgactacttta 42743207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 242 - 311
Target Start/End: Original strand, 43971575 - 43971644
Alignment:
Q  242 tacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  43971575 tacttctaaagtattattttttctttaatgaaaaacaaaccaatagttgattaggataattcggtaaaat 43971644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 236 - 317
Target Start/End: Complemental strand, 45081972 - 45081891
Alignment:
Q  236 ttacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctat 317  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||| ||||    
T  45081972 ttacactacttccaaagcattattttttctttaatgaaaaacaaaacaatagttgattaggataatttggtaaaatttctat 45081891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 236 - 312
Target Start/End: Original strand, 1423272 - 1423348
Alignment:
Q  236 ttacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaatt 312  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||||    
T  1423272 ttacactacttccaaaatattattttttctttaatgagaaacaaaccaatagttgattaggataatttggtaaaatt 1423348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 236 - 343
Target Start/End: Complemental strand, 34546221 - 34546114
Alignment:
Q  236 ttacactacttccaaagtattatttttt-ctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactacttt 334  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||| ||||||| | |||||||  |||||| |||||||||||||    
T  34546221 ttacactacttccaaaggattatttttttctttaatgaaaaacaaatcaatagttgattaggataatttgataaaattattatgac-atttgactacttt 34546123  T
Q  335 attcgattc 343  Q
    |||| ||||    
T  34546122 attccattc 34546114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 236 - 343
Target Start/End: Original strand, 13562075 - 13562180
Alignment:
Q  236 ttacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactacttta 335  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| |||||||  ||||||||  |||||| |||||||||||||     
T  13562075 ttacactacttccaaagtattattttttatttaatgaaaaacaaaccaatggttgattaggataatttagtaaaatt-atatgac-atttgactactttc 13562172  T
Q  336 ttcgattc 343  Q
    ||| ||||    
T  13562173 ttccattc 13562180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 237 - 344
Target Start/End: Complemental strand, 16807588 - 16807482
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactactttat 336  Q
    ||||| |||||||||| ||||| |||||||||||||||||||||| ||||||||||||  |||||| | |||||||| |||||| |||||||||||||||    
T  16807588 tacaccacttccaaagaattatattttctttaatgaaaaacaaacaaatagttgattagaataatttgataaaattgttatgac-atttgactactttat 16807490  T
Q  337 tcgattca 344  Q
    || |||||    
T  16807489 tccattca 16807482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 237 - 344
Target Start/End: Complemental strand, 16846869 - 16846763
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactactttat 336  Q
    ||||| |||||||||| ||||| |||||||||||||||||||||| ||||||||||||  |||||| | |||||||| |||||| |||||||||||||||    
T  16846869 tacaccacttccaaagaattatattttctttaatgaaaaacaaacaaatagttgattagaataatttgataaaattgttatgac-atttgactactttat 16846771  T
Q  337 tcgattca 344  Q
    || |||||    
T  16846770 tccattca 16846763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 237 - 311
Target Start/End: Complemental strand, 18719504 - 18719430
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  18719504 tacactattttcaaagtattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 18719430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 231 - 337
Target Start/End: Complemental strand, 36106480 - 36106375
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||| ||||||||||||||| |||||||||||| |||||| |||||||| |||||||||||||| ||||||| |||||||||| || ||  |||||||||    
T  36106480 ctatgttacactacttccaatgtattattttttttttaataaaaaacaatccaatagttgattaagataatttggtaaaattgtta-gaacatttgacta 36106382  T
Q  331 ctttatt 337  Q
    |||||||    
T  36106381 ctttatt 36106375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 231 - 337
Target Start/End: Original strand, 42753822 - 42753928
Alignment:
Q  231 ctatattacactacttccaaagtattatt-ttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgact 329  Q
    |||| ||||||||||||||||||| |||| |||| ||||| |||||||||| ||||||||||||| ||| ||| ||||||||||||||||| ||||| ||    
T  42753822 ctatgttacactacttccaaagtactattattttttttaaagaaaaacaaatcaatagttgattaggatgatttggtaaaattgctatgac-atttgtct 42753920  T
Q  330 actttatt 337  Q
    ||||||||    
T  42753921 actttatt 42753928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 237 - 311
Target Start/End: Original strand, 10195756 - 10195830
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    ||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||||| ||||||| ||||||||    
T  10195756 tacactacttccaaaatattattttttctttaataaaaaacaaaacaatagttgattaggataatttggtaaaat 10195830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 237 - 302
Target Start/End: Complemental strand, 43480941 - 43480876
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataatt 302  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  43480941 tacacaacttccaaagtattattttttctttaatgaaaaacaaaccaatagtttattaggataatt 43480876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 236 - 343
Target Start/End: Original strand, 42004972 - 42005077
Alignment:
Q  236 ttacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactacttta 335  Q
    |||||||||||||||||||||||| ||| |||||| |||||||||| |||||||||||| ||||||| ||| |||||||||   | ||||||||||||||    
T  42004972 ttacactacttccaaagtattattgtttttttaat-aaaaacaaacaaatagttgattaggataatttggtgaaattgctactgc-atttgactacttta 42005069  T
Q  336 ttcgattc 343  Q
    ||| ||||    
T  42005070 ttcaattc 42005077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 237 - 291
Target Start/End: Original strand, 18579248 - 18579302
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttga 291  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  18579248 tacactacttccaaagtataattttttctttaatgaaaaacaaaccaatagttga 18579302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 237 - 295
Target Start/End: Original strand, 19164438 - 19164496
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattat 295  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||    
T  19164438 tacactactttcaaagtattattttttctttaatgaataacaaaccaatagttgattat 19164496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 237 - 311
Target Start/End: Complemental strand, 4658305 - 4658229
Alignment:
Q  237 tacactacttccaaagtatta--ttttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||| || |||| ||||||||    
T  4658305 tacactactttcaaagtattaatttttttctttaatgaaaaacaaaccaatagttgattaggacaatttggtaaaat 4658229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 251 - 311
Target Start/End: Complemental strand, 27964282 - 27964222
Alignment:
Q  251 agtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||| ||||||||    
T  27964282 agtattattttttctttaatgaaaaacaaaccaatagttgattaaaataatttggtaaaat 27964222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 237 - 308
Target Start/End: Original strand, 11132632 - 11132703
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaa 308  Q
    |||| ||||| |||| ||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||    
T  11132632 tacattactttcaaaatattattttttctttaatgaaaaacaaacaaatagttgattataataatttggtaa 11132703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 234 - 337
Target Start/End: Original strand, 18717155 - 18717257
Alignment:
Q  234 tattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactactt 333  Q
    |||||||||||||  ||||| |||||| || |||||||||||||||||||||| ||||||| |||||||  ||||||||| |||| | |||||||||| |    
T  18717155 tattacactacttttaaagttttatttattttttaatgaaaaacaaaccaataattgattaggataattttgtaaaattgttatggc-atttgactacat 18717253  T
Q  334 tatt 337  Q
    ||||    
T  18717254 tatt 18717257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 237 - 311
Target Start/End: Complemental strand, 27726489 - 27726417
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||| |||||||||| |||||||||||  ||||||||||||||||||||||||||||| ||||||| ||||||||    
T  27726489 tacattacttccaaattattatttttt--ttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 27726417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 236 - 311
Target Start/End: Original strand, 8540118 - 8540194
Alignment:
Q  236 ttacactacttccaaagtattatttt-ttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||||||||||| ||| ||||||||| |||||||||||||||||||| |||||||||||| ||||||| | ||||||    
T  8540118 ttacactacttctaaaatattatttttttctttaatgaaaaacaaactaatagttgattaggataatttgataaaat 8540194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 240 - 311
Target Start/End: Complemental strand, 7872845 - 7872774
Alignment:
Q  240 actacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||| ||| |  |||||| ||||||||    
T  7872845 actactttcaaagtattattttttctttaatgaaaaacaaatcaatagtcgatcagaataatttggtaaaat 7872774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 253 - 311
Target Start/End: Complemental strand, 11188305 - 11188247
Alignment:
Q  253 tattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||| | ||||||||    
T  11188305 tattattttttctttaatgaaaaacaacccaatagttgattaggataacttggtaaaat 11188247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 253 - 311
Target Start/End: Complemental strand, 40608661 - 40608603
Alignment:
Q  253 tattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||||||||||||||||||||||||||||  ||||||||||| ||||||| ||||||||    
T  40608661 tattattttttctttaatgaaaaacaaacttatagttgattaggataatttggtaaaat 40608603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 237 - 311
Target Start/End: Complemental strand, 12566052 - 12565978
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||||| |||||||||||| ||||| |||||||||||||||||| ||||  |||| || ||||||| ||||||||    
T  12566052 tacactgcttccaaagtataattttgtctttaatgaaaaacaaatcaatgattgagtaagataatttggtaaaat 12565978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 238 - 311
Target Start/End: Complemental strand, 36685811 - 36685739
Alignment:
Q  238 acactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||||||||  ||| ||||||||||||||| ||||||| |||||||||| ||||||| ||||||| ||||||||    
T  36685811 acactactttgaaaatattattttttctttgatgaaaa-caaaccaataattgattaggataatttggtaaaat 36685739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 245 - 302
Target Start/End: Original strand, 19469613 - 19469672
Alignment:
Q  245 ttccaaagtattatttt--ttctttaatgaaaaacaaaccaatagttgattatgataatt 302  Q
    |||||||||||||||||  ||||||||||||||||||| ||||| ||||||| |||||||    
T  19469613 ttccaaagtattattttttttctttaatgaaaaacaaatcaataattgattacgataatt 19469672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 100 - 139
Target Start/End: Original strand, 6247667 - 6247706
Alignment:
Q  100 ataaataatacttcctcccttttaaaatgagtgtcgtttt 139  Q
    |||||||||||| ||||| |||||||||||||||||||||    
T  6247667 ataaataatactccctccgttttaaaatgagtgtcgtttt 6247706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 237 - 276
Target Start/End: Complemental strand, 7028884 - 7028845
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaa 276  Q
    |||||||||| ||||||||||||||||||||||| |||||    
T  7028884 tacactactttcaaagtattattttttctttaataaaaaa 7028845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 240 - 311
Target Start/End: Complemental strand, 15083230 - 15083162
Alignment:
Q  240 actacttccaaagtattatttttt-ctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||||||| ||||||||||||||| |||||||||||||     ||||| ||||||||||||||| ||||||||    
T  15083230 actacttctaaagtattatttttttctttaatgaaaaat----caataattgattatgataatttggtaaaat 15083162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 249 - 308
Target Start/End: Complemental strand, 33482289 - 33482230
Alignment:
Q  249 aaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaa 308  Q
    ||||||||| |||||| ||||| ||||||||||||| |||||| || ||||||| |||||    
T  33482289 aaagtattaatttttccttaataaaaaacaaaccaaaagttgaataggataatttggtaa 33482230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 257 - 307
Target Start/End: Complemental strand, 27726592 - 27726542
Alignment:
Q  257 attttttctttaatgaaaaacaaaccaatagttgattatgataattcggta 307  Q
    ||||||| ||||||||||||||||| ||||||| |||| ||||||| ||||    
T  27726592 attttttttttaatgaaaaacaaactaatagttaattaggataatttggta 27726542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 141
Target Start/End: Complemental strand, 14286160 - 14286127
Alignment:
Q  108 tacttcctcccttttaaaatgagtgtcgttttag 141  Q
    |||||||||| |||||||||||||||||||||||    
T  14286160 tacttcctccgttttaaaatgagtgtcgttttag 14286127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 286
Target Start/End: Original strand, 29411777 - 29411826
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaata 286  Q
    |||| ||||| |||| ||||||||||||| ||| ||||||||||||||||    
T  29411777 tacattactttcaaaatattattttttctctaaggaaaaacaaaccaata 29411826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 310
Target Start/End: Original strand, 34455793 - 34455846
Alignment:
Q  257 attttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaa 310  Q
    |||||||||||||| ||||  |||||| |||||||||| ||||||| |||||||    
T  34455793 attttttctttaataaaaattaaaccagtagttgattaggataatttggtaaaa 34455846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 101 - 141
Target Start/End: Original strand, 22620250 - 22620290
Alignment:
Q  101 taaataatacttcctcccttttaaaatgagtgtcgttttag 141  Q
    ||||| ||||||||||| ||| |||||||||||||||||||    
T  22620250 taaattatacttcctccatttcaaaatgagtgtcgttttag 22620290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 85; Significance: 2e-40; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 231 - 343
Target Start/End: Original strand, 1742067 - 1742178
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||    
T  1742067 ctatgttacactactttcaaagtattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattgctatgac-atttgacta 1742165  T
Q  331 ctttattcgattc 343  Q
    |||||||| ||||    
T  1742166 ctttattccattc 1742178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 231 - 335
Target Start/End: Original strand, 22298072 - 22298175
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||    
T  22298072 ctatgttacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattgctatgac-atttgacta 22298170  T
Q  331 cttta 335  Q
    |||||    
T  22298171 cttta 22298175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 231 - 337
Target Start/End: Original strand, 35777895 - 35778000
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||| |||||| |||||||||    
T  35777895 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagtttattaggataatttggtaaaattgttatgac-atttgacta 35777993  T
Q  331 ctttatt 337  Q
    |||||||    
T  35777994 ctttatt 35778000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 231 - 343
Target Start/End: Original strand, 37815800 - 37815911
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||| |||||||||    
T  37815800 ctatgttacactactttcaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaattgctatgac-atttgacta 37815898  T
Q  331 ctttattcgattc 343  Q
     ||||||| ||||    
T  37815899 ttttattccattc 37815911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 231 - 343
Target Start/End: Complemental strand, 42880009 - 42879898
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||| ||||| |||    
T  42880009 ctatgttacactacttccaaagaattattttttctttaatgaaaaacaaactaatagttgattacgataatttggtaaaattgctatgac-atttgccta 42879911  T
Q  331 ctttattcgattc 343  Q
    |||||||| ||||    
T  42879910 ctttattccattc 42879898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 231 - 338
Target Start/End: Complemental strand, 45948705 - 45948599
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||| ||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||| |||||||||    
T  45948705 ctatgttacattacttccaaaatattattttttctttaatgaaaaacaaaccaatggttgattacgataatttggtaaaattgctatgac-atttgacta 45948607  T
Q  331 ctttattc 338  Q
    ||||||||    
T  45948606 ctttattc 45948599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 231 - 337
Target Start/End: Complemental strand, 13405202 - 13405097
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||| |||||||||    
T  13405202 ctatgttacactactttcaaagtattgttttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattgctacgac-atttgacta 13405104  T
Q  331 ctttatt 337  Q
    |||||||    
T  13405103 ctttatt 13405097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 231 - 343
Target Start/End: Original strand, 23935497 - 23935608
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||| ||||||||||||| ||| ||||||||||||||||| ||||||||| ||||||||||||| ||||||| ||||||||||||||||| |||||||||    
T  23935497 ctatgttacactacttccgaaggattattttttctttaataaaaaacaaaacaatagttgattaggataatttggtaaaattgctatgac-atttgacta 23935595  T
Q  331 ctttattcgattc 343  Q
    |||||||| ||||    
T  23935596 ctttattccattc 23935608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 237 - 344
Target Start/End: Complemental strand, 27947570 - 27947464
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactactttat 336  Q
    |||||||||||||||| || |||||||||||||||||||||||| ||||||||||||| |||||||  |||||||||||||||| |||||||||||||||    
T  27947570 tacactacttccaaaggatgattttttctttaatgaaaaacaaatcaatagttgattaggataatttagtaaaattgctatgac-atttgactactttat 27947472  T
Q  337 tcgattca 344  Q
    || |||||    
T  27947471 tcaattca 27947464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 231 - 338
Target Start/End: Complemental strand, 31418588 - 31418482
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||  |||||||||||| ||||||| ||| ||||||||||||| |||||||||    
T  31418588 ctatgttacactacttccaaagtattattttttctttaattaaaaacaaattaatagttgattaggataatttggtgaaattgctatgac-atttgacta 31418490  T
Q  331 ctttattc 338  Q
    ||||||||    
T  31418489 ctttattc 31418482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 256 - 343
Target Start/End: Original strand, 10599464 - 10599550
Alignment:
Q  256 tattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactactttattcgattc 343  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||| ||||    
T  10599464 tattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattgctatgac-atttgactactttattccattc 10599550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 236 - 343
Target Start/End: Complemental strand, 23155531 - 23155426
Alignment:
Q  236 ttacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactacttta 335  Q
    ||||| |||||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||| |||||||||    
T  23155531 ttacattacttctaaagtattatttttt-tttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattgctatgac-atttaactacttta 23155434  T
Q  336 ttcgattc 343  Q
    ||| ||||    
T  23155433 ttcaattc 23155426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 242 - 337
Target Start/End: Original strand, 24680215 - 24680309
Alignment:
Q  242 tacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactactttatt 337  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||||| |||||||||| |||||| ||||||||||||||||    
T  24680215 tacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattagaataatttggtaaaattgttatgac-atttgactactttatt 24680309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 231 - 343
Target Start/End: Original strand, 44453211 - 44453320
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||| |||||||||||| |||||||||||||||  |||||||||||||||||||||| |||||| ||||||| |||||||||| |||||| |||||||||    
T  44453211 ctatgttacactacttctaaagtattatttttt--ttaatgaaaaacaaaccaataggtgattaggataatttggtaaaattgttatgac-atttgacta 44453307  T
Q  331 ctttattcgattc 343  Q
    |||||||| ||||    
T  44453308 ctttattccattc 44453320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 240 - 343
Target Start/End: Original strand, 27935852 - 27935954
Alignment:
Q  240 actacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactactttattcg 339  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| |||| | ||||| |||||||||| ||||||  ||||||||||||||||     
T  27935852 actacttccaaagtattattttttctttaatgaaaaacaaatcaatagttaattaagctaatttggtaaaattgttatgac-ttttgactactttattca 27935950  T
Q  340 attc 343  Q
    ||||    
T  27935951 attc 27935954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 237 - 311
Target Start/End: Original strand, 40339540 - 40339614
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  40339540 tacactacttccaaagtattcttttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 40339614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 236 - 337
Target Start/End: Complemental strand, 29531005 - 29530905
Alignment:
Q  236 ttacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactacttta 335  Q
    |||||| |||| ||||||||||||||||||| ||| ||||||||| ||||||||||||| ||| ||| ||||||||||||||||| ||||||||||||||    
T  29531005 ttacaccactttcaaagtattattttttcttcaataaaaaacaaatcaatagttgattaggatgatttggtaaaattgctatgac-atttgactacttta 29530907  T
Q  336 tt 337  Q
    ||    
T  29530906 tt 29530905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 231 - 338
Target Start/End: Original strand, 41137804 - 41137910
Alignment:
Q  231 ctatattacactacttccaaagtattatttttt-ctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgact 329  Q
    |||| ||||||||||||||||||| |||||||| |||||||||||  ||||||| |||||||||| ||||||| ||||||||||||||||| ||||||||    
T  41137804 ctatgttacactacttccaaagtaatatttttttctttaatgaaat-caaaccagtagttgattaggataatttggtaaaattgctatgac-atttgact 41137901  T
Q  330 actttattc 338  Q
    |||||||||    
T  41137902 actttattc 41137910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 231 - 337
Target Start/End: Original strand, 48684799 - 48684904
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||| |||||| |||| ||||||||||||||||||||||| ||||||||| |||||| |||| | ||||||| |||||||||| |||||| |||||||||    
T  48684799 ctatgttacaccactttcaaagtattattttttctttaataaaaaacaaatcaatagatgataaggataatttggtaaaattgttatgac-atttgacta 48684897  T
Q  331 ctttatt 337  Q
    |||||||    
T  48684898 ctttatt 48684904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 231 - 343
Target Start/End: Complemental strand, 45933663 - 45933553
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||| |||||||| ||| ||||||||||||||| |||||||||||||||||||| ||||||||| ||||||| | ||||||||||||||  |||||||||    
T  45933663 ctatgttacactatttctaaagtattatttttt-tttaatgaaaaacaaaccaaaagttgattaagataatttgataaaattgctatga-tatttgacta 45933566  T
Q  331 ctttattcgattc 343  Q
     ||||||| ||||    
T  45933565 ttttattcaattc 45933553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 237 - 311
Target Start/End: Original strand, 28289295 - 28289370
Alignment:
Q  237 tacactacttccaaagtattatttt-ttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  28289295 tacactactttcaaagtattatttttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 28289370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 237 - 311
Target Start/End: Original strand, 21819364 - 21819438
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||    
T  21819364 tacattacttccaaaatattattttttctttaatgaaaaacaaaccaatagtttattaggataatttggtaaaat 21819438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 236 - 337
Target Start/End: Original strand, 36808016 - 36808115
Alignment:
Q  236 ttacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactacttta 335  Q
    ||||||||||| |||||| |||||||||||||||||||||||||  ||||||||||||  | ||||| | ||||||||||||||| ||||||||||||||    
T  36808016 ttacactactttcaaagt-ttattttttctttaatgaaaaacaactcaatagttgattcgggtaatttgataaaattgctatgac-atttgactacttta 36808113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 237 - 311
Target Start/End: Complemental strand, 8293138 - 8293064
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    ||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||| | ||||||| ||||||||    
T  8293138 tacactacttccaaattattattttttctgtaatgaaaaacaaatcaatagttgatcacgataatttggtaaaat 8293064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 237 - 311
Target Start/End: Complemental strand, 21752181 - 21752107
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    ||||||| || |||||||||||||| ||||||||||||||||||||||||||||||||  |||||| ||||||||    
T  21752181 tacactattttcaaagtattattttatctttaatgaaaaacaaaccaatagttgattagaataatttggtaaaat 21752107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 237 - 311
Target Start/End: Complemental strand, 29636296 - 29636222
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| || |||| ||||||| | ||||||    
T  29636296 tacactacttctaaagtattattttttctttaatgaaaaacaaaccaataatttattaggataatttgataaaat 29636222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 237 - 311
Target Start/End: Complemental strand, 40753498 - 40753425
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||  |||||| ||||||||    
T  40753498 tacactactttcaaagtattattttt-ctttaatgaaaaacaaaccaatagttgattagaataatttggtaaaat 40753425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 237 - 302
Target Start/End: Original strand, 48843633 - 48843699
Alignment:
Q  237 tacactacttccaaagtattatttt-ttctttaatgaaaaacaaaccaatagttgattatgataatt 302  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  48843633 tacactacttccaacgtattatttttttctttaatgaaaaacaaaccaatagttgattaggataatt 48843699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 237 - 307
Target Start/End: Original strand, 1031236 - 1031306
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggta 307  Q
    ||||||||||||||| |||||||||||||||||| |||||  || ||||||||||||||||||||| ||||    
T  1031236 tacactacttccaaattattattttttctttaataaaaaaagaatcaatagttgattatgataatttggta 1031306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 242 - 311
Target Start/End: Complemental strand, 6563484 - 6563414
Alignment:
Q  242 tacttccaaagtattatttttt-ctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||||||||||||||||||||| |||||||||||||||||||||| |||||||| ||||||| | ||||||    
T  6563484 tacttccaaagtattatttttttctttaatgaaaaacaaaccaatggttgattaggataatttgataaaat 6563414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 237 - 311
Target Start/End: Complemental strand, 47461443 - 47461370
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    ||||||||| | |||| ||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||    
T  47461443 tacactactcctaaag-attattttttctttaatgaaaaacaaaccaatagttgattaggataatttgataaaat 47461370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 237 - 302
Target Start/End: Original strand, 7759341 - 7759406
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataatt 302  Q
    |||||||||| |||||||||||||||||||||||  ||||||||| |||||||||||| |||||||    
T  7759341 tacactactttcaaagtattattttttctttaatagaaaacaaactaatagttgattaggataatt 7759406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 248 - 311
Target Start/End: Original strand, 7335372 - 7335436
Alignment:
Q  248 caaagtattattttttctttaatg-aaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||||||||||||||||||||||  ||||||||||||| ||||||||||||||||| ||||||||    
T  7335372 caaagtattattttttctttaatttaaaaacaaaccaacagttgattatgataatttggtaaaat 7335436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 243 - 311
Target Start/End: Original strand, 25055869 - 25055937
Alignment:
Q  243 acttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||  |||||||||||  ||||||||    
T  25055869 acttccaaaatattattttttctttaatgaaaaacaaatcaatagtaaattatgataatgtggtaaaat 25055937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 232 - 311
Target Start/End: Original strand, 37490863 - 37490943
Alignment:
Q  232 tatattacactacttccaaagtattatttt-ttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||| ||||||||||  ||||||||||||| |||||||||||||||||||| ||||||| |||| ||||||| ||||||||    
T  37490863 tatagtacactacttggaaagtattatttttttctttaatgaaaaacaaactaatagtttattaagataatttggtaaaat 37490943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 237 - 311
Target Start/End: Complemental strand, 33939804 - 33939729
Alignment:
Q  237 tacactacttccaaagtatta-ttttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    ||||||| ||||||||||||| ||||||||||||||||||| ||||||| |||||||||  |||||| ||||||||    
T  33939804 tacactaattccaaagtattacttttttctttaatgaaaaataaaccaacagttgattagaataatttggtaaaat 33939729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 271 - 337
Target Start/End: Complemental strand, 7795278 - 7795213
Alignment:
Q  271 gaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactactttatt 337  Q
    ||||||||||||||||| |||||| ||||||| ||||||||||||||||| |||| |||||||||||    
T  7795278 gaaaaacaaaccaataggtgattaggataatttggtaaaattgctatgac-attttactactttatt 7795213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 237 - 311
Target Start/End: Original strand, 10476217 - 10476291
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||||||||||||||||||||||| || |||| | ||||||||| ||||||||||||| ||||||| | ||||||    
T  10476217 tacactacttccaaagtattatttattttttagtaaaaaacaaatcaatagttgattaggataatttgataaaat 10476291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 240 - 311
Target Start/End: Complemental strand, 45499895 - 45499820
Alignment:
Q  240 actacttccaaagtattatt----ttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    ||||||| ||||||||||||    |||||||||||||||||||||||||||||| |||| ||||||| ||||||||    
T  45499895 actactttcaaagtattattatttttttctttaatgaaaaacaaaccaatagttaattaggataatttggtaaaat 45499820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 258 - 311
Target Start/End: Original strand, 34012559 - 34012612
Alignment:
Q  258 ttttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||    
T  34012559 ttttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 34012612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 251 - 311
Target Start/End: Complemental strand, 19303450 - 19303390
Alignment:
Q  251 agtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||||||| ||||||||||||||||| |||||||| ||||||||||||||||  |||||||    
T  19303450 agtattatattttctttaatgaaaaataaaccaatggttgattatgataatttagtaaaat 19303390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 240 - 311
Target Start/End: Complemental strand, 24133197 - 24133124
Alignment:
Q  240 actacttccaaagtattattttttctttaatgaaaaacaaaccaat--agttgattatgataattcggtaaaat 311  Q
    ||||| |||||| |||||||||||||||||||||||||||| ||||  |||||||||  |||||| ||||||||    
T  24133197 actacatccaaaatattattttttctttaatgaaaaacaaatcaatacagttgattagtataatttggtaaaat 24133124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 237 - 280
Target Start/End: Original strand, 30312539 - 30312582
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaa 280  Q
    |||||||||||||||||||||||||||||||| | |||||||||    
T  30312539 tacactacttccaaagtattattttttctttagtaaaaaacaaa 30312582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 237 - 311
Target Start/End: Original strand, 31196651 - 31196723
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    ||||||| || ||||||||||||||||||||||  ||||| ||| |||||||||||| |||||||| | ||||||    
T  31196651 tacactaatttcaaagtattattttttctttaa--aaaaataaatcaatagttgattgtgataatttgataaaat 31196723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 294
Target Start/End: Complemental strand, 19105054 - 19105014
Alignment:
Q  254 attattttttctttaatgaaaaacaaaccaatagttgatta 294  Q
    |||||||||||||||||||| |||||| |||||||||||||    
T  19105054 attattttttctttaatgaagaacaaatcaatagttgatta 19105014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 237 - 311
Target Start/End: Complemental strand, 24780389 - 24780314
Alignment:
Q  237 tacactacttccaaagtattat-tttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    ||||||| || ||||||||||  |||||||||||| ||||| ||||||||||| ||||| |||||||  |||||||    
T  24780389 tacactaatttcaaagtattacgtttttctttaattaaaaataaaccaatagtagattaggataatttagtaaaat 24780314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 242 - 288
Target Start/End: Original strand, 4268698 - 4268744
Alignment:
Q  242 tacttccaaagtattattttttctttaatgaaaaacaaaccaatagt 288  Q
    |||||||||| ||||||||| | |||||||||||||||| |||||||    
T  4268698 tacttccaaattattattttctttttaatgaaaaacaaatcaatagt 4268744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 237 - 267
Target Start/End: Original strand, 8604056 - 8604086
Alignment:
Q  237 tacactacttccaaagtattattttttcttt 267  Q
    |||||||||||||||||||||||||||||||    
T  8604056 tacactacttccaaagtattattttttcttt 8604086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 249 - 294
Target Start/End: Original strand, 42753800 - 42753843
Alignment:
Q  249 aaagtattattttttctttaatgaaaaacaaaccaatagttgatta 294  Q
    |||||||||||||||  ||||||||||| |||||||||||||||||    
T  42753800 aaagtattatttttt--ttaatgaaaaataaaccaatagttgatta 42753843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 311
Target Start/End: Original strand, 7900011 - 7900084
Alignment:
Q  238 acactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    ||||||||| |||||||||| ||||  |||| || |||||||||||||||||  | | ||||||| ||||||||    
T  7900011 acactactttcaaagtattacttttgttttagtggaaaacaaaccaatagttattgaggataatttggtaaaat 7900084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 141
Target Start/End: Original strand, 31929772 - 31929813
Alignment:
Q  100 ataaataatacttcctcccttttaaaatgagtgtcgttttag 141  Q
    |||||||||||| ||||| ||| |||||||||||||||||||    
T  31929772 ataaataatactccctccatttcaaaatgagtgtcgttttag 31929813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 140
Target Start/End: Original strand, 39557272 - 39557309
Alignment:
Q  103 aataatacttcctcccttttaaaatgagtgtcgtttta 140  Q
    ||||||||||| ||| ||||||||||||||||||||||    
T  39557272 aataatacttcatccgttttaaaatgagtgtcgtttta 39557309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 84; Significance: 9e-40; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 231 - 338
Target Start/End: Complemental strand, 23525390 - 23525284
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| |||||||||    
T  23525390 ctatgttacattacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataatttggtaaaattgttatgac-atttgacta 23525292  T
Q  331 ctttattc 338  Q
    ||||||||    
T  23525291 ctttattc 23525284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 236 - 343
Target Start/End: Original strand, 44676302 - 44676408
Alignment:
Q  236 ttacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactacttta 335  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||| |||||||||    
T  44676302 ttacactagttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattgctatgac-atttaactacttta 44676400  T
Q  336 ttcgattc 343  Q
    ||| ||||    
T  44676401 ttctattc 44676408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 231 - 337
Target Start/End: Original strand, 38016450 - 38016555
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||||| ||||||| |||||||||    
T  38016450 ctatgttacactacttccaaagtattattttttctttaatgaaaaacaaactaatagttgattaggataatttggtaaaattactatgac-atttgacta 38016548  T
Q  331 ctttatt 337  Q
    |||||||    
T  38016549 ctttatt 38016555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 231 - 337
Target Start/End: Complemental strand, 45213796 - 45213691
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||  |||||| ||||||||||||||||| |||||||||    
T  45213796 ctatattacactactttcaaagtattattttttctttaatgaaaagcaaaccaatagttgattagaataatttggtaaaattgctatgac-atttgacta 45213698  T
Q  331 ctttatt 337  Q
    |||||||    
T  45213697 ctttatt 45213691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 236 - 337
Target Start/End: Complemental strand, 33194100 - 33194000
Alignment:
Q  236 ttacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactacttta 335  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||| ||||||||||||||    
T  33194100 ttacattacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattatgataatttggtaaaattgttatgac-atttgactacttta 33194002  T
Q  336 tt 337  Q
    ||    
T  33194001 tt 33194000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 236 - 337
Target Start/End: Original strand, 39359001 - 39359101
Alignment:
Q  236 ttacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactacttta 335  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||| ||||||||||||||    
T  39359001 ttacactacttctaaagtattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattgttatgac-atttgactacttta 39359099  T
Q  336 tt 337  Q
    ||    
T  39359100 tt 39359101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 232 - 337
Target Start/End: Original strand, 30431197 - 30431301
Alignment:
Q  232 tatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactac 331  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||| ||||||| |||||||||| |||||| ||||||||||    
T  30431197 tatattacactacttccaaagtattattttttctctaatgaaaaacaagtcaatagttgattaggataatttggtaaaattgttatgac-atttgactac 30431295  T
Q  332 tttatt 337  Q
    ||||||    
T  30431296 tttatt 30431301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 236 - 338
Target Start/End: Original strand, 38363872 - 38363973
Alignment:
Q  236 ttacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactacttta 335  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||| ||||||| ||||||||||||||||| |||||||| |||||    
T  38363872 ttacactacttccaaagtattattttttctttaatgaaaaacaaaccaacggtttattaggataatttggtaaaattgctatgac-atttgactgcttta 38363970  T
Q  336 ttc 338  Q
    |||    
T  38363971 ttc 38363973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 231 - 337
Target Start/End: Complemental strand, 47895418 - 47895313
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||| |||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||||| ||||||||||||||||| || ||||||    
T  47895418 ctatgttacactatttccaaagtattattttttctttaatgaaaagcaaacaaatagttgattaggataatttggtaaaattgctatgac-atatgacta 47895320  T
Q  331 ctttatt 337  Q
    |||||||    
T  47895319 ctttatt 47895313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 236 - 336
Target Start/End: Complemental strand, 41287565 - 41287466
Alignment:
Q  236 ttacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactacttta 335  Q
    ||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||| ||||||| ||||||    
T  41287565 ttacattacttccaaagtatttttttttctttaatgaaaaagaaaccaatagttgattaggataatttggtaaaattgctatgac-atttgaccacttta 41287467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 231 - 337
Target Start/End: Original strand, 2458083 - 2458189
Alignment:
Q  231 ctatattacactacttccaaagtattatttt-ttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgact 329  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||  ||||||||||||||||| ||||||| ||||||||||||||||| |||| |||    
T  2458083 ctatattacactacttccaaagtattgtttttttctttaatgaaaattaaaccaatagttgattaggataatttggtaaaattgctatgac-attttact 2458181  T
Q  330 actttatt 337  Q
    ||||||||    
T  2458182 actttatt 2458189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 231 - 337
Target Start/End: Complemental strand, 35557832 - 35557722
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgat-----tatgataattcggtaaaattgctatgacaattt 325  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||     |||||||||| ||||||||||||||||| ||||    
T  35557832 ctatgttacactacttccaaagtattattttttctttaatgaaaaataaaccaatagttgattaggatatgataatttggtaaaattgctatgac-attt 35557734  T
Q  326 gactactttatt 337  Q
    || |||||||||    
T  35557733 gattactttatt 35557722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 231 - 337
Target Start/End: Complemental strand, 31853636 - 31853531
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| | |||||||| |||||| |||||||||    
T  31853636 ctatgttacactactttcaaagtattattttttctttaatgaaagacaaaccaatagttgattaggataatttgataaaattgttatgac-atttgacta 31853538  T
Q  331 ctttatt 337  Q
     ||||||    
T  31853537 ttttatt 31853531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 231 - 337
Target Start/End: Original strand, 45566875 - 45566980
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||||||||| |||||  ||| |||| |||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||| |||||||||    
T  45566875 ctatattacattacttttaaaatattgttttttctttaatgaaaaacaaaccaatggttgattaggataatttggtaaaattgctatgac-atttgacta 45566973  T
Q  331 ctttatt 337  Q
    |||||||    
T  45566974 ctttatt 45566980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 231 - 343
Target Start/End: Complemental strand, 30426398 - 30426286
Alignment:
Q  231 ctatattacactacttccaaagtattatttttt-ctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgact 329  Q
    |||| |||||||||||||||| |||| |||||| ||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||    
T  30426398 ctatgttacactacttccaaaatattttttttttcttcaatgaaaaacaaaccaatagttgattaagataatttggtaaaattgctatgac-atttgact 30426300  T
Q  330 actttattcgattc 343  Q
    ||| ||||| ||||    
T  30426299 actatattccattc 30426286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 231 - 336
Target Start/End: Complemental strand, 50088390 - 50088286
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| |||| ||||  |||||| ||    
T  50088390 ctatgttacactactttcaaagtattaatttttctttaatgaaaaacaaaccaatagttgattatgataatttggtaaagttgccatga-tatttgagta 50088292  T
Q  331 ctttat 336  Q
    ||||||    
T  50088291 ctttat 50088286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 236 - 337
Target Start/End: Complemental strand, 53200750 - 53200650
Alignment:
Q  236 ttacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactacttta 335  Q
    ||||||||||| ||||||| ||||||||| |||||||||| ||||| |||||||||||| ||||||| ||||||||||||||||| ||||||||||||||    
T  53200750 ttacactactttcaaagtactattttttccttaatgaaaagcaaactaatagttgattaggataatttggtaaaattgctatgac-atttgactacttta 53200652  T
Q  336 tt 337  Q
    ||    
T  53200651 tt 53200650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 231 - 338
Target Start/End: Original strand, 47138039 - 47138147
Alignment:
Q  231 ctatattacactacttccaaagtattatttt--ttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgac 328  Q
    |||| ||||| |||||||||| |||||||||  |||||||||||||||||||| |||| ||||||| ||||||| ||||||||||||||||| |||||||    
T  47138039 ctatgttacagtacttccaaaatattattttttttctttaatgaaaaacaaacgaataattgattaggataatttggtaaaattgctatgac-atttgac 47138137  T
Q  329 tactttattc 338  Q
    ||||||||||    
T  47138138 tactttattc 47138147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 231 - 337
Target Start/End: Original strand, 51398086 - 51398191
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||| |||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||| ||||||| |||||||||| ||| || |||||| ||    
T  51398086 ctatgttacactacttccaaaatattattttttctttaatgaaaaataaatcaatagttgattaggataatttggtaaaattgttataac-atttgatta 51398184  T
Q  331 ctttatt 337  Q
    |||||||    
T  51398185 ctttatt 51398191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 236 - 338
Target Start/End: Original strand, 11393626 - 11393727
Alignment:
Q  236 ttacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactacttta 335  Q
    ||||||||||||||||||||||||||||||||||| || |||||| ||||||||||||| ||||||| | |||||||| ||||   ||||||||||||||    
T  11393626 ttacactacttccaaagtattattttttctttaattaataacaaatcaatagttgattaggataatttgataaaattgttatg-gtatttgactacttta 11393724  T
Q  336 ttc 338  Q
    |||    
T  11393725 ttc 11393727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 236 - 338
Target Start/End: Complemental strand, 13756942 - 13756841
Alignment:
Q  236 ttacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactacttta 335  Q
    ||||| |||||  |||||||||||||||||||||| ||||||||||||||||||||||| ||||||| | |||||||||||  || ||||||||||||||    
T  13756942 ttacattacttttaaagtattattttttctttaataaaaaacaaaccaatagttgattaggataatttgctaaaattgctacaac-atttgactacttta 13756844  T
Q  336 ttc 338  Q
    |||    
T  13756843 ttc 13756841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 237 - 311
Target Start/End: Original strand, 19373667 - 19373741
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| || |||| ||||||||    
T  19373667 tacactacttccaaagttttattttttctttaatgaaaaacaaaccaatagttgattaggagaatttggtaaaat 19373741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 240 - 337
Target Start/End: Original strand, 36460891 - 36460986
Alignment:
Q  240 actacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactactttatt 337  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||| ||||||||| ||||||  |||| |||||||||||    
T  36460891 actacttccaaagtattattttt-ctttgatgaaaaacaaaccaatagttgattaggataatttggtaaaattactatga-tatttaactactttatt 36460986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 237 - 311
Target Start/End: Original strand, 30315390 - 30315465
Alignment:
Q  237 tacactacttccaaa-gtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  30315390 tacactactttcaaaagtattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 30315465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 237 - 311
Target Start/End: Complemental strand, 30934878 - 30934804
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||||| | ||||||    
T  30934878 tacactacttctaaagtattattttatctttaatgaaaaacaaaccaatatttgattatgataatttgataaaat 30934804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 231 - 338
Target Start/End: Complemental strand, 36381448 - 36381340
Alignment:
Q  231 ctatattacactacttccaaagtattattt--tttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgac 328  Q
    |||||||||| |||||  |||||||||| |  ||| |||||||||||||||| |||||| |||||| ||||||| ||||||||||||||||| |||||||    
T  36381448 ctatattacattacttttaaagtattatatattttttttaatgaaaaacaaatcaatagatgattaagataatttggtaaaattgctatgac-atttgac 36381350  T
Q  329 tactttattc 338  Q
    ||||||||||    
T  36381349 tactttattc 36381340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 237 - 311
Target Start/End: Complemental strand, 36844811 - 36844737
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||||||||||||||||||||| |||||||||||||||||| || ||||||||||||| ||||||| ||||||||    
T  36844811 tacactacttccaaagtattatgttttctttaatgaaaaactaatcaatagttgattaggataatttggtaaaat 36844737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 258 - 337
Target Start/End: Original strand, 41850485 - 41850562
Alignment:
Q  258 ttttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactactttatt 337  Q
    |||||||||||||||||| |||||||||||||||||| ||||||| |||||||||| |||||| ||||||||||||||||    
T  41850485 ttttttctttaatgaaaa-caaaccaatagttgattaggataatttggtaaaattgttatgac-atttgactactttatt 41850562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 231 - 337
Target Start/End: Complemental strand, 3152880 - 3152776
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||| |||||||||||||||| |||| | ||||||||||| ||||||||||||||| |||||||  |||||| |||||||||| |||||| || ||||||    
T  3152880 ctatgttacactacttccaaaatattttattttctttaat-aaaaacaaaccaataattgattagaataattgggtaaaattgttatgac-atctgacta 3152783  T
Q  331 ctttatt 337  Q
    |||||||    
T  3152782 ctttatt 3152776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 237 - 311
Target Start/End: Complemental strand, 9189504 - 9189430
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||| |||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||| ||| ||||||||    
T  9189504 tacattacttccaaaatattattttttctttaataaaaaacaaaccaatagttgattacgatgatttggtaaaat 9189430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 237 - 311
Target Start/End: Original strand, 38141031 - 38141105
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||  |||||| ||||||||    
T  38141031 tacactacttccaaaatataattttttctttaatgaaaaacaaaccaataattgattagaataatttggtaaaat 38141105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 234 - 338
Target Start/End: Complemental strand, 45518555 - 45518452
Alignment:
Q  234 tattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactactt 333  Q
    |||||||||| || |||||||||| |||||||||||||||||| | | ||||| ||||||| ||||||| | |||||||| |||||| ||||||||| ||    
T  45518555 tattacactattttcaaagtattaatttttctttaatgaaaaatatatcaataattgattaggataatttgataaaattgttatgac-atttgactattt 45518457  T
Q  334 tattc 338  Q
    |||||    
T  45518456 tattc 45518452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 236 - 343
Target Start/End: Complemental strand, 33024369 - 33024263
Alignment:
Q  236 ttacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactacttta 335  Q
    ||||||| ||| ||| ||||||||| |||||||||| |||||||| ||||||||||||| ||||||| | ||||||||||| ||  ||| ||||||||||    
T  33024369 ttacactgctttcaacgtattatttcttctttaatggaaaacaaatcaatagttgattaagataatttgataaaattgctacga-tattcgactacttta 33024271  T
Q  336 ttcgattc 343  Q
    ||| ||||    
T  33024270 ttcaattc 33024263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 237 - 311
Target Start/End: Original strand, 42072066 - 42072140
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||| |||||| |||||||||| |||||||||||| |||||||| |||||||||||||||||||||  |||||||    
T  42072066 tacattacttctaaagtattatgttttctttaatggaaaacaaatcaatagttgattatgataatttagtaaaat 42072140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 236 - 289
Target Start/End: Complemental strand, 36729879 - 36729826
Alignment:
Q  236 ttacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagtt 289  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||||||||||    
T  36729879 ttacattacttccaaagtattattttttatttaatgaaaaacaaaccaatagtt 36729826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 254 - 338
Target Start/End: Complemental strand, 45392008 - 45391926
Alignment:
Q  254 attattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactactttattc 338  Q
    ||||||||||||| |||||||||||    |||||||||||||||||||| ||||||||||||||||| |||||| ||||||||||    
T  45392008 attattttttcttaaatgaaaaacagtt-aatagttgattatgataatttggtaaaattgctatgac-atttgattactttattc 45391926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 236 - 319
Target Start/End: Complemental strand, 32492250 - 32492168
Alignment:
Q  236 ttacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatga 319  Q
    |||||||||||||||| |||||||||||||||||| ||||| ||| ||||| ||||||| ||||||| | |||||||| |||||    
T  32492250 ttacactacttccaaaatattattttttctttaat-aaaaaaaaatcaataattgattaggataatttgataaaattgttatga 32492168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 272 - 338
Target Start/End: Complemental strand, 36729805 - 36729740
Alignment:
Q  272 aaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactactttattc 338  Q
    ||||||||||||||||||||||| ||||||| |||||||||| |||||  |||||||||||||||||    
T  36729805 aaaaacaaaccaatagttgattaggataatttggtaaaattgttatga-tatttgactactttattc 36729740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 237 - 311
Target Start/End: Original strand, 40487909 - 40487983
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    ||||||||||| ||||||||||||||||||||  ||||||||||  ||||||||||||| |||||| | ||||||    
T  40487909 tacactacttctaaagtattattttttctttatcgaaaaacaaattaatagttgattataataatttgataaaat 40487983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 237 - 311
Target Start/End: Original strand, 50346706 - 50346780
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||| |||||||||  |||||||||||||||||||||||||||| |||||||| |||| ||||||| | ||||||    
T  50346706 tacattacttccaacatattattttttctttaatgaaaaacaaatcaatagttaattaagataatttgataaaat 50346780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 238 - 311
Target Start/End: Original strand, 8817223 - 8817296
Alignment:
Q  238 acactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||||||||| || ||||||||||||||||||||||||| ||| |||||||||||||  |||||| | ||||||    
T  8817223 acactacttctaatgtattattttttctttaatgaaaaataaatcaatagttgattagaataatttgataaaat 8817296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 237 - 311
Target Start/End: Original strand, 48903367 - 48903441
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    ||||||| || || |||||||||||||||||||| ||||||||| |||||||||||||  |||||| | ||||||    
T  48903367 tacactaatttcatagtattattttttctttaattaaaaacaaagcaatagttgattaaaataatttgataaaat 48903441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 237 - 302
Target Start/End: Complemental strand, 7230962 - 7230898
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataatt 302  Q
    ||||||||||| ||| |||||||||| ||||||||| ||| ||||||||||||||||| |||||||    
T  7230962 tacactacttcgaaattattattttt-ctttaatgagaaagaaaccaatagttgattaggataatt 7230898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 251 - 320
Target Start/End: Original strand, 39168802 - 39168871
Alignment:
Q  251 agtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgac 320  Q
    ||||||||||||| ||||||||||||||||  ||||||| |||| ||||||| | ||||||| |||||||    
T  39168802 agtattattttttttttaatgaaaaacaaattaatagttaattaggataatttgataaaattactatgac 39168871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 311
Target Start/End: Complemental strand, 40717717 - 40717665
Alignment:
Q  258 ttttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||||||||||||||||| |||||||||||||||||| ||||||| ||||||||    
T  40717717 ttttttctttaatgaaaa-caaaccaatagttgattaagataatttggtaaaat 40717665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 48901801 - 48901858
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgatta 294  Q
    ||||||| || || |||||||||||||||||||| ||||||||| |||||||||||||    
T  48901801 tacactaatttcatagtattattttttctttaattaaaaacaaagcaatagttgatta 48901858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 236 - 337
Target Start/End: Original strand, 51482016 - 51482117
Alignment:
Q  236 ttacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactacttta 335  Q
    ||||| ||||||||||| |||||||||||||||||||||||  || |  | ||| |||| ||||||| | |||||||||||  |  ||||||||||||||    
T  51482016 ttacattacttccaaagcattattttttctttaatgaaaaaataatcttttgtttattaggataatttgataaaattgctactaatatttgactacttta 51482115  T
Q  336 tt 337  Q
    ||    
T  51482116 tt 51482117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 259 - 309
Target Start/End: Original strand, 27067710 - 27067759
Alignment:
Q  259 tttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaa 309  Q
    ||||||||||||||||| |||||||||||||||||| ||||||| ||||||    
T  27067710 tttttctttaatgaaaa-caaaccaatagttgattaggataatttggtaaa 27067759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 141
Target Start/End: Complemental strand, 4759526 - 4759487
Alignment:
Q  102 aaataatacttcctcccttttaaaatgagtgtcgttttag 141  Q
    |||||||||| ||||| |||||||||||||||||||||||    
T  4759526 aaataatactccctccattttaaaatgagtgtcgttttag 4759487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 237 - 311
Target Start/End: Original strand, 3985932 - 3986006
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||| |||| ||| ||||||| |||| ||||| || ||||||||||||||||| || | ||||||| ||||||||    
T  3985932 tacattactcccatagtattacttttactttagtggaaaacaaaccaatagttaataaggataatttggtaaaat 3986006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 141
Target Start/End: Complemental strand, 45213916 - 45213883
Alignment:
Q  108 tacttcctcccttttaaaatgagtgtcgttttag 141  Q
    |||||||||| |||||||||||||||||||||||    
T  45213916 tacttcctccgttttaaaatgagtgtcgttttag 45213883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 102 - 142
Target Start/End: Original strand, 31290880 - 31290920
Alignment:
Q  102 aaataatacttcctcccttttaaaatgagtgtcgttttagc 142  Q
    ||||| |||| ||||| ||||||||||||||||||||||||    
T  31290880 aaatattactccctccgttttaaaatgagtgtcgttttagc 31290920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 103 - 143
Target Start/End: Complemental strand, 37225798 - 37225758
Alignment:
Q  103 aataatacttcctcccttttaaaatgagtgtcgttttagct 143  Q
    |||| |||| ||||| |||||||||||||||||||||||||    
T  37225798 aatagtactccctccgttttaaaatgagtgtcgttttagct 37225758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 83; Significance: 4e-39; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 231 - 337
Target Start/End: Complemental strand, 2729863 - 2729758
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||  ||||||||    
T  2729863 ctatgttacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattgctatgac-gtttgacta 2729765  T
Q  331 ctttatt 337  Q
    |||||||    
T  2729764 ctttatt 2729758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 236 - 337
Target Start/End: Complemental strand, 3306081 - 3305981
Alignment:
Q  236 ttacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactacttta 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||    
T  3306081 ttacactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaagataatttggtaaaattgctatgac-atttgactacttta 3305983  T
Q  336 tt 337  Q
    ||    
T  3305982 tt 3305981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 231 - 343
Target Start/End: Original strand, 39730022 - 39730133
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||| |||||||||    
T  39730022 ctatgttacactacttccaaaatattattttttctttaatgaaaaacaaacgaatagttgattaggataatttggtaaaattgctatgac-atttgacta 39730120  T
Q  331 ctttattcgattc 343  Q
    |||||||| ||||    
T  39730121 ctttattccattc 39730133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 231 - 337
Target Start/End: Complemental strand, 42978150 - 42978045
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||    
T  42978150 ctatgttacactacttacatagtattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattgctatgac-atttgacta 42978052  T
Q  331 ctttatt 337  Q
    |||||||    
T  42978051 ctttatt 42978045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 231 - 343
Target Start/End: Original strand, 4425050 - 4425161
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||||| ||||||| |||||||||| |||||| |||||||||    
T  4425050 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaatcgatagatgattaagataatttggtaaaattggtatgac-atttgacta 4425148  T
Q  331 ctttattcgattc 343  Q
    |||||||| ||||    
T  4425149 ctttattcaattc 4425161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 231 - 343
Target Start/End: Complemental strand, 42104140 - 42104029
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||| ||||||| ||||||||||||||||| |||||||||    
T  42104140 ctatgttacactacttccaaggtattattttttctttaatgaaaaacaagtcaatagttgattaggataatttggtaaaattgctatgac-atttgacta 42104042  T
Q  331 ctttattcgattc 343  Q
    |||||||| ||||    
T  42104041 ctttattccattc 42104029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 236 - 343
Target Start/End: Complemental strand, 14620566 - 14620460
Alignment:
Q  236 ttacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactacttta 335  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||| | ||||||||||||||| ||||||||||||||    
T  14620566 ttacactacttccaaagtattattttttctttgatgaaaaacaaaccaataattgattaagataatttgataaaattgctatgac-atttgactacttta 14620468  T
Q  336 ttcgattc 343  Q
    ||| ||||    
T  14620467 ttctattc 14620460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 231 - 337
Target Start/End: Original strand, 14005968 - 14006073
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||||| |||||||| |||||||||    
T  14005968 ctatgttacactacttccaaggtattattttttctttaatgaaaaacaaaccaatatttgattaggataatttggtaaaatagctatgac-atttgacta 14006066  T
Q  331 ctttatt 337  Q
    |||||||    
T  14006067 ctttatt 14006073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 231 - 337
Target Start/End: Complemental strand, 34446104 - 34446000
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||  |||||||||    
T  34446104 ctatgttacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaatt-ctatga-tatttgacta 34446007  T
Q  331 ctttatt 337  Q
    |||||||    
T  34446006 ctttatt 34446000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 236 - 337
Target Start/End: Original strand, 39566264 - 39566364
Alignment:
Q  236 ttacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactacttta 335  Q
    |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||||| |||||||||| |||||| ||||||||||||||    
T  39566264 ttacactacttccaaagtattattttctctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaattgttatgac-atttgactacttta 39566362  T
Q  336 tt 337  Q
    ||    
T  39566363 tt 39566364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 231 - 337
Target Start/End: Complemental strand, 42662017 - 42661912
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||| |||||||||| |||||| |||||||||    
T  42662017 ctatgttacactacttccaaagtattattttttctttaataaaaaacaaactaatagttgattaggataatttggtaaaattgttatgac-atttgacta 42661919  T
Q  331 ctttatt 337  Q
     ||||||    
T  42661918 ttttatt 42661912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 231 - 343
Target Start/End: Complemental strand, 8336486 - 8336373
Alignment:
Q  231 ctatattacactacttccaaagtattatttttt--ctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgac 328  Q
    |||| |||||||||||||||| |||||||||||  ||||||| ||||||||||||||||||||||| ||||||| |||||||||| |||||| |||||||    
T  8336486 ctatgttacactacttccaaaatattattttttttctttaataaaaaacaaaccaatagttgattaggataatttggtaaaattgttatgac-atttgac 8336388  T
Q  329 tactttattcgattc 343  Q
    |||||||||| ||||    
T  8336387 tactttattccattc 8336373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 231 - 343
Target Start/End: Complemental strand, 39335281 - 39335169
Alignment:
Q  231 ctatattacactacttccaaagtattatttttt-ctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgact 329  Q
    |||| |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||  |||||  ||||||||    
T  39335281 ctatgttacactacttccaaagtgttatttttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattattatga-tatttgact 39335183  T
Q  330 actttattcgattc 343  Q
    ||||||||| ||||    
T  39335182 actttattcaattc 39335169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 237 - 310
Target Start/End: Original strand, 11977669 - 11977742
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaa 310  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| |||||||    
T  11977669 tacactacttccaaagtattattttttctttaatgaacaacaaaccaatagttgattaggataatttggtaaaa 11977742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 238 - 311
Target Start/End: Original strand, 34534441 - 34534514
Alignment:
Q  238 acactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  34534441 acactacttccaaaatattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 34534514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 231 - 337
Target Start/End: Original strand, 6519052 - 6519158
Alignment:
Q  231 ctatattacactacttccaaagtattatttt-ttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgact 329  Q
    |||| ||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||| | |||||||| |||||| |||| |||    
T  6519052 ctatgttacactactttcaaagtattatttttttctttaatgaaaaacaaatcaatagttgattaggataatttgataaaattgttatgac-attttact 6519150  T
Q  330 actttatt 337  Q
    ||||||||    
T  6519151 actttatt 6519158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 231 - 337
Target Start/End: Original strand, 26660831 - 26660935
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||| ||| |||||||| | ||||||||||| |||||||||||||||||||||||||||||||| || |||| ||||||||||||||||| ||||||| |    
T  26660831 ctatgttatactacttctagagtattatttt-tctttaatgaaaaacaaaccaatagttgattaagagaatttggtaaaattgctatgac-atttgacaa 26660928  T
Q  331 ctttatt 337  Q
    |||||||    
T  26660929 ctttatt 26660935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 231 - 337
Target Start/End: Original strand, 26932424 - 26932528
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||| ||| |||||||| | ||||||||||| |||||||||||||||||||||||||||||||| || |||| ||||||||||||||||| ||||||| |    
T  26932424 ctatgttatactacttctagagtattatttt-tctttaatgaaaaacaaaccaatagttgattaagagaatttggtaaaattgctatgac-atttgacaa 26932521  T
Q  331 ctttatt 337  Q
    |||||||    
T  26932522 ctttatt 26932528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 231 - 343
Target Start/End: Complemental strand, 21375728 - 21375616
Alignment:
Q  231 ctatattacactacttccaaagtattatttttt-ctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgact 329  Q
    |||| ||||||||||| ||||||| |||||||| |||||||||||||||||| ||||| |||||| ||||||| ||||||||||||||||  ||||||||    
T  21375728 ctatgttacactactttcaaagtaatatttttttctttaatgaaaaacaaacaaataggtgattaggataatttggtaaaattgctatga-tatttgact 21375630  T
Q  330 actttattcgattc 343  Q
    | ||||||| ||||    
T  21375629 attttattccattc 21375616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 231 - 343
Target Start/End: Complemental strand, 29807392 - 29807280
Alignment:
Q  231 ctatattacactacttccaaagtattatttttt-ctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgact 329  Q
    |||| |||||||||||||||| ||||||||||| ||||| | ||||||||||||||||||||||| ||||||| ||||||||| |||| || ||||||||    
T  29807392 ctatgttacactacttccaaaatattatttttttctttagtaaaaaacaaaccaatagttgattaggataatttggtaaaatttctattac-atttgact 29807294  T
Q  330 actttattcgattc 343  Q
    | ||||||| ||||    
T  29807293 aatttattccattc 29807280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 237 - 311
Target Start/End: Complemental strand, 4911187 - 4911112
Alignment:
Q  237 tacactacttccaaagtattatttttt-ctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  4911187 tacactactttcaaagtattatttttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 4911112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 237 - 311
Target Start/End: Original strand, 843099 - 843173
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    ||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||    
T  843099 tacactacttcaaaagtgttattttttctttaatgagaaacaaaccaatagttgattaggataatttggtaaaat 843173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 237 - 311
Target Start/End: Complemental strand, 14161972 - 14161898
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||||||||| | ||||||    
T  14161972 tacactacttccaaagtattattttttctttaatgaaaaataaaccagtagttgtttatgataatttgataaaat 14161898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 242 - 311
Target Start/End: Original strand, 27797865 - 27797933
Alignment:
Q  242 tacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  27797865 tacttccaaagtattatttt-tctttaatgaaaaacaaaccaatagttgattaagataatttggtaaaat 27797933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 245 - 338
Target Start/End: Complemental strand, 34972713 - 34972621
Alignment:
Q  245 ttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactactttattc 338  Q
    ||||||||||||||| |||||||||| |||||||||  |||||||||||| ||||||| |||||||||| || ||| |||||||||||||||||    
T  34972713 ttccaaagtattattctttctttaataaaaaacaaattaatagttgattaggataatttggtaaaattgatacgac-atttgactactttattc 34972621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 237 - 311
Target Start/End: Original strand, 7736455 - 7736529
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||| ||||||  ||||||||    
T  7736455 tacactactttcaaagtattattttttctttaatgaaaaacgaactaatagttgattaggataatatggtaaaat 7736529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 237 - 311
Target Start/End: Complemental strand, 15167083 - 15167009
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    ||||||||||||||| ||||||||||||||||||||||||  ||||||||||||| || ||||||| ||||||||    
T  15167083 tacactacttccaaaatattattttttctttaatgaaaaattaaccaatagttgactaggataatttggtaaaat 15167009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 237 - 311
Target Start/End: Original strand, 21634193 - 21634266
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||||| || ||||||||    
T  21634193 tacactacttccaaaatattatttt-tctttaatgaaaaacaaaccaataattgattatgatactttggtaaaat 21634266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 237 - 311
Target Start/End: Original strand, 21642440 - 21642513
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||||| || ||||||||    
T  21642440 tacactacttccaaaatattatttt-tctttaatgaaaaacaaaccaataattgattatgatactttggtaaaat 21642513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 237 - 311
Target Start/End: Original strand, 36164968 - 36165042
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||| |||||||||| |||||||||||||||||| ||||||||| ||||||||||||| ||||||| ||||||||    
T  36164968 tacattacttccaaaatattattttttctttaataaaaaacaaatcaatagttgattaggataatttggtaaaat 36165042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 236 - 337
Target Start/End: Original strand, 39504804 - 39504906
Alignment:
Q  236 ttacactacttccaaagtattatttt--ttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactactt 333  Q
    |||||||||||||||| |||||||||  ||||||| |||||||||||| ||||||||||||  |||||| |||||||||| || ||| |||| |||||||    
T  39504804 ttacactacttccaaaatattattttttttctttattgaaaaacaaactaatagttgattagaataatttggtaaaattgttacgac-attttactactt 39504902  T
Q  334 tatt 337  Q
    ||||    
T  39504903 tatt 39504906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 237 - 311
Target Start/End: Original strand, 38369953 - 38370027
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||||||||| ||||||||||||||||  |||||||||||| ||| |||||||||||| ||||||| ||||||||    
T  38369953 tacactactttcaaagtattatttttttattaatgaaaaacgaacaaatagttgattaggataatttggtaaaat 38370027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 241 - 311
Target Start/End: Original strand, 13974358 - 13974429
Alignment:
Q  241 ctacttccaaagtatta-ttttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    ||||||||||| ||||| |||||||||||||| ||||||||| |||||||||||| ||||||| ||||||||    
T  13974358 ctacttccaaaatattacttttttctttaatggaaaacaaacaaatagttgattaggataatttggtaaaat 13974429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 260 - 315
Target Start/End: Complemental strand, 21319360 - 21319305
Alignment:
Q  260 ttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgct 315  Q
    |||| |||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  21319360 ttttttttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattgct 21319305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 237 - 311
Target Start/End: Complemental strand, 1309430 - 1309356
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||||||||| |||  |||||||||||||||||||| ||||||| |||| |||||||||||||||| | ||||||    
T  1309430 tacactacttacaacatattattttttctttaatgataaacaaatcaattgttgattatgataatttgataaaat 1309356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 237 - 311
Target Start/End: Original strand, 7721176 - 7721250
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||| ||||| |||||||||||||||||||||| || ||||||||||||| ||||||| ||||||| | ||||||    
T  7721176 tacattactttcaaagtattattttttctttaaagacaaacaaaccaataattgattaggataatttgttaaaat 7721250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 243 - 308
Target Start/End: Complemental strand, 7748963 - 7748898
Alignment:
Q  243 acttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaa 308  Q
    |||| ||||||||||||||||||||||||||||||||||||||| || ||||  |||||| |||||    
T  7748963 actttcaaagtattattttttctttaatgaaaaacaaaccaataattaattagaataatttggtaa 7748898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 258 - 315
Target Start/End: Original strand, 13761823 - 13761880
Alignment:
Q  258 ttttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgct 315  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||  |||||||||||    
T  13761823 ttttttctttaatgaaaaataaaccaatagttgattaagataattttgtaaaattgct 13761880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 260 - 337
Target Start/End: Original strand, 27600499 - 27600575
Alignment:
Q  260 ttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactactttatt 337  Q
    |||| |||||||||||||||| ||||||||||||| ||||||| ||||||||| | ||||  ||||||||||||||||    
T  27600499 ttttttttaatgaaaaacaaatcaatagttgattaggataatttggtaaaattacaatga-tatttgactactttatt 27600575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 254 - 294
Target Start/End: Complemental strand, 28591681 - 28591641
Alignment:
Q  254 attattttttctttaatgaaaaacaaaccaatagttgatta 294  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  28591681 attattttttctttaatgaaaaacaaatcaatagttgatta 28591641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 259 - 302
Target Start/End: Complemental strand, 7579643 - 7579600
Alignment:
Q  259 tttttctttaatgaaaaacaaaccaatagttgattatgataatt 302  Q
    |||||||||||||||||||||| ||||||||||||| |||||||    
T  7579643 tttttctttaatgaaaaacaaatcaatagttgattaggataatt 7579600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 240 - 311
Target Start/End: Complemental strand, 38362206 - 38362135
Alignment:
Q  240 actacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||||||  |||||||||||||||||||||| ||||| ||| |||||||| |||| |||||||  |||||||    
T  38362206 actacttttaaagtattattttttctttaataaaaaataaaacaatagttaattaggataatttagtaaaat 38362135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 311
Target Start/End: Original strand, 41645330 - 41645391
Alignment:
Q  249 aaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||  |||||| | ||||||    
T  41645330 aaagtattatttt-tctttaatgaaaaacaaaccaatggttgattaaaataatttgataaaat 41645391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 102 - 143
Target Start/End: Complemental strand, 42978270 - 42978229
Alignment:
Q  102 aaataatacttcctcccttttaaaatgagtgtcgttttagct 143  Q
    |||| ||||||||||| |||||||||||||||||||||||||    
T  42978270 aaattatacttcctccgttttaaaatgagtgtcgttttagct 42978229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 275
Target Start/End: Complemental strand, 34208970 - 34208926
Alignment:
Q  232 tatattacactacttccaaagtattatt-ttttctttaatgaaaa 275  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||    
T  34208970 tatattacactacttccaaaatattatttttttctttaatgaaaa 34208926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 231 - 266
Target Start/End: Original strand, 13761633 - 13761668
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctt 266  Q
    |||| |||||||||||||||||||||||||||||||    
T  13761633 ctatgttacactacttccaaagtattattttttctt 13761668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 282 - 311
Target Start/End: Complemental strand, 9065687 - 9065658
Alignment:
Q  282 caatagttgattatgataattcggtaaaat 311  Q
    ||||||||||||||||||||||||||||||    
T  9065687 caatagttgattatgataattcggtaaaat 9065658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 286
Target Start/End: Complemental strand, 34382151 - 34382102
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaata 286  Q
    |||||||||| |||| ||| ||||||| |||||||| |||||||||||||    
T  34382151 tacactactttcaaaatatcattttttatttaatgagaaacaaaccaata 34382102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 31557241 - 31557285
Alignment:
Q  97 gtcataaataatacttcctcccttttaaaatgagtgtcgttttag 141  Q
    ||||||||| ||||| ||||| |||||||| ||||||||||||||    
T  31557241 gtcataaatgatactccctccgttttaaaacgagtgtcgttttag 31557285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 108 - 140
Target Start/End: Original strand, 34171119 - 34171151
Alignment:
Q  108 tacttcctcccttttaaaatgagtgtcgtttta 140  Q
    |||||||||| ||||||||||||||||||||||    
T  34171119 tacttcctccattttaaaatgagtgtcgtttta 34171151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 78; Significance: 3e-36; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 236 - 337
Target Start/End: Original strand, 40228655 - 40228755
Alignment:
Q  236 ttacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactacttta 335  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||| ||||||||||||||    
T  40228655 ttacattacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattgttatgac-atttgactacttta 40228753  T
Q  336 tt 337  Q
    ||    
T  40228754 tt 40228755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 231 - 337
Target Start/End: Complemental strand, 4760635 - 4760531
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||    
T  4760635 ctatgttacactactttcaaagtattattttt-ctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattgctatgac-atttgacta 4760538  T
Q  331 ctttatt 337  Q
    |||||||    
T  4760537 ctttatt 4760531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 237 - 343
Target Start/End: Original strand, 39463340 - 39463444
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactactttat 336  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||| ||| |||||||||||||||    
T  39463340 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaacagttgattaggataatt-ggtaaaattgctacgac-atttgactactttat 39463437  T
Q  337 tcgattc 343  Q
    || ||||    
T  39463438 tccattc 39463444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 231 - 337
Target Start/End: Complemental strand, 39698743 - 39698638
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||| ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| || |||||||||    
T  39698743 ctatgttacattacttccaaaatattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattgctataac-atttgacta 39698645  T
Q  331 ctttatt 337  Q
    |||||||    
T  39698644 ctttatt 39698638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 236 - 343
Target Start/End: Original strand, 17921037 - 17921144
Alignment:
Q  236 ttacactacttccaaagtattatttt-ttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactacttt 334  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||| ||||||||| |||    
T  17921037 ttacactacttccaaagtattatttttttctttaatgaaaaacaaaccaatagttgattagaataatttggtaaaattgctatgac-atttgactatttt 17921135  T
Q  335 attcgattc 343  Q
    |||| ||||    
T  17921136 attcaattc 17921144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 231 - 338
Target Start/End: Complemental strand, 9880578 - 9880472
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||  |||||||||||||||| ||||||| |    
T  9880578 ctatgttacactacttccaaagtattattttttctttaatgaaaaataaatcaatagttgattaggataatttcgtaaaattgctatgac-atttgacca 9880480  T
Q  331 ctttattc 338  Q
    ||||||||    
T  9880479 ctttattc 9880472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 236 - 337
Target Start/End: Original strand, 7839539 - 7839639
Alignment:
Q  236 ttacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactacttta 335  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||  ||||  ||||||||||||||    
T  7839539 ttacactacttccaaaatattattttttctttaatgaaaaataaaccaatagttgattaagataattcggtaaaattgtcatga-tatttgactacttta 7839637  T
Q  336 tt 337  Q
    ||    
T  7839638 tt 7839639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 236 - 337
Target Start/End: Original strand, 43448797 - 43448897
Alignment:
Q  236 ttacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactacttta 335  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||| |||||| ||||||||||||||    
T  43448797 ttacattactttcaaagtattattttttctttaatgaaaaacaaactaatagttgattaggataatttggtaaaattgatatgac-atttgactacttta 43448895  T
Q  336 tt 337  Q
    ||    
T  43448896 tt 43448897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 236 - 337
Target Start/End: Original strand, 44713615 - 44713715
Alignment:
Q  236 ttacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactacttta 335  Q
    ||||||||||| |||| |||||||||||||||||||||||| |||| |||||||||||||||||||| |||||| |||||||||| ||||||||||||||    
T  44713615 ttacactactttcaaaatattattttttctttaatgaaaaataaactaatagttgattatgataatttggtaaagttgctatgac-atttgactacttta 44713713  T
Q  336 tt 337  Q
    ||    
T  44713714 tt 44713715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 236 - 343
Target Start/End: Original strand, 4989559 - 4989665
Alignment:
Q  236 ttacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactacttta 335  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| || ||||||| || |||||||||||||  ||||||||||||||    
T  4989559 ttacactacttacaaagtattattttttctttaatgaaaaacaaatcaatagttgagtaggataatttgggaaaattgctatga-tatttgactacttta 4989657  T
Q  336 ttcgattc 343  Q
    ||| ||||    
T  4989658 ttccattc 4989665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 231 - 337
Target Start/End: Complemental strand, 43084704 - 43084599
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||| ||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||||| | ||||| ||||||||| ||||||| |||||||||    
T  43084704 ctatgttacactacttccaaaaaattattttttctttaatgaaacacaaaccaatagttgattagggtaatttggtaaaattactatgac-atttgacta 43084606  T
Q  331 ctttatt 337  Q
    |||||||    
T  43084605 ctttatt 43084599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 236 - 321
Target Start/End: Complemental strand, 31899320 - 31899235
Alignment:
Q  236 ttacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgaca 321  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||| |||||||||| |||||||    
T  31899320 ttacactacttccaaagtattatcttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaattgttatgaca 31899235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 237 - 311
Target Start/End: Original strand, 6374494 - 6374568
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  6374494 tacattacttccaaagtattattttttctttaatgaaaaacaaactaatagttgattatgataatttggtaaaat 6374568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 237 - 311
Target Start/End: Complemental strand, 40399949 - 40399875
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  40399949 tacactactttcaaagtattattttttctttaatgaaaaacaaactaatagttgattatgataatttggtaaaat 40399875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 237 - 311
Target Start/End: Complemental strand, 45358966 - 45358892
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||    
T  45358966 tacactacttccaaagtattattttttctttaatgaaaaacaaactaatagttgattaaaataattcggtaaaat 45358892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 243 - 343
Target Start/End: Complemental strand, 29025814 - 29025715
Alignment:
Q  243 acttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactactttattcgatt 342  Q
    |||||||| ||||||||||||||||||| ||||||||| ||||||||||||| ||||||| ||||||||||||||||| |||||  |||||||||| |||    
T  29025814 acttccaatgtattattttttctttaataaaaaacaaatcaatagttgattaggataatttggtaaaattgctatgac-atttgtgtactttattctatt 29025716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 253 - 337
Target Start/End: Complemental strand, 36669849 - 36669766
Alignment:
Q  253 tattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactactttatt 337  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||  ||||||||||||||||    
T  36669849 tattattttttctttaatgaaaaacaaactaatagttgattaggataatttggtaaaattgctatga-tatttgactactttatt 36669766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 240 - 338
Target Start/End: Complemental strand, 9304701 - 9304605
Alignment:
Q  240 actacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactactttattc 338  Q
    |||||||||||| ||||||||||||||||| |||||||||| ||||||||||||| ||||||| ||||||||||||||||| |||| |||| |||||||    
T  9304701 actacttccaaaatattattttttctttaa-gaaaaacaaatcaatagttgattaggataatttggtaaaattgctatgac-atttaactattttattc 9304605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 237 - 311
Target Start/End: Original strand, 34156616 - 34156690
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||    
T  34156616 tacactacttccaaaatattattttttctttaatgaaaaacaaaccaatggttgattatgataatttgataaaat 34156690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 237 - 311
Target Start/End: Complemental strand, 15750402 - 15750327
Alignment:
Q  237 tacactacttccaaagtattatttttt-ctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||| ||||||||    
T  15750402 tacactacttccaaagtattatttttttctttaatgaaaaataaaccaatagttgattaggataatttggtaaaat 15750327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 237 - 311
Target Start/End: Original strand, 9812254 - 9812328
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||||||||| |||||||  |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  9812254 tacactactttcaaagtacaattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 9812328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 237 - 311
Target Start/End: Complemental strand, 14234287 - 14234213
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||||| || |||||    
T  14234287 tacactacttccaaaatattattttttctttaacgaaaaacaaaccaatagttgattaggataatttggcaaaat 14234213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 237 - 311
Target Start/End: Complemental strand, 34796752 - 34796679
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| | ||||||    
T  34796752 tacactacttccaaagtattatttttt-tttaatgaaaaacaaaccaatagttgattaggataatttgataaaat 34796679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 237 - 311
Target Start/End: Original strand, 41679393 - 41679467
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    ||||||||||  ||| ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  41679393 tacactacttttaaaatattattttttctttaatgaaaatcaaaccaatagttgattatgataatttggtaaaat 41679467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 237 - 311
Target Start/End: Original strand, 514958 - 515032
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||| ||||||| | ||||||    
T  514958 tacactacttccgaagtattatattttctataatgaaaaacaaaccaatagttgattaggataatttgctaaaat 515032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 237 - 311
Target Start/End: Complemental strand, 13368020 - 13367946
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| || ||||||| ||||||  ||||||||    
T  13368020 tacactacttccaaagtattattttttctttaatgaaaaataaaccagtaattgattaggataatatggtaaaat 13367946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 236 - 337
Target Start/End: Complemental strand, 31693693 - 31693591
Alignment:
Q  236 ttacactacttccaaagtattattttttctttaatgaaaaacaaaccaat---agttgattatgataattcggtaaaattgctatgacaatttgactact 332  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||| |||   ||||||||| |||||||  ||||||||| |||||| |||||||||||    
T  31693693 ttacacta-ttccaaagtattattttatctttaatgaaaaacaaactaataccagttgattaggataatttagtaaaattgttatgac-atttgactact 31693596  T
Q  333 ttatt 337  Q
    |||||    
T  31693595 ttatt 31693591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 236 - 338
Target Start/End: Complemental strand, 5790720 - 5790617
Alignment:
Q  236 ttacactacttccaaagtattatttttt--ctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactactt 333  Q
    ||||||||||| |||| |||||||||||  || ||||||||| |||||||||||||||||| ||||||| ||||||||||||| ||  ||||||||| ||    
T  5790720 ttacactactttcaaaatattattttttttctctaatgaaaagcaaaccaatagttgattaggataatttggtaaaattgctacga-tatttgactattt 5790622  T
Q  334 tattc 338  Q
    |||||    
T  5790621 tattc 5790617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 231 - 282
Target Start/End: Original strand, 19574463 - 19574514
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaacc 282  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  19574463 ctatattacactacttccaaaatattattttttctttaatgaaaaacaaacc 19574514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 249 - 311
Target Start/End: Original strand, 42179188 - 42179250
Alignment:
Q  249 aaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||  |||||||    
T  42179188 aaagtattattttttctttaatgaaaaacaaactaatagttaattatgataatttagtaaaat 42179250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 237 - 311
Target Start/End: Complemental strand, 5295478 - 5295403
Alignment:
Q  237 tacactacttccaaagtattatttttt-ctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    ||||||||||||||| ||||||||||| | ||||| ||||||||| ||||||||||||| ||||||| ||||||||    
T  5295478 tacactacttccaaaatattatttttttcattaataaaaaacaaagcaatagttgattaggataatttggtaaaat 5295403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 237 - 311
Target Start/End: Original strand, 13496316 - 13496393
Alignment:
Q  237 tacactacttccaaagta---ttattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    ||||||||||||||||||   |||||||||||| || |||||||||||||||| ||||||| ||||||| ||||||||    
T  13496316 tacactacttccaaagtagtattattttttcttgaaagaaaaacaaaccaataattgattaggataatttggtaaaat 13496393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 251 - 294
Target Start/End: Complemental strand, 29312248 - 29312205
Alignment:
Q  251 agtattattttttctttaatgaaaaacaaaccaatagttgatta 294  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  29312248 agtattattttttctttaatgaaaaacaaaccaatagttgatta 29312205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 237 - 311
Target Start/End: Complemental strand, 43970123 - 43970049
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||| |||||| |||||||||||||||||||||| ||| ||||| ||||||||||||| ||||||| | ||||||    
T  43970123 tacattacttctaaagtattattttttctttaataaaagacaaatcaatagttgattaggataatttgataaaat 43970049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 231 - 283
Target Start/End: Original strand, 19438312 - 19438365
Alignment:
Q  231 ctatattacactacttccaaagtatt-attttttctttaatgaaaaacaaacca 283  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  19438312 ctatattacactacttccaaaatatttattttttctttaatgaaaaacaaacca 19438365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 242 - 294
Target Start/End: Complemental strand, 31234006 - 31233954
Alignment:
Q  242 tacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgatta 294  Q
    |||||| ||| |||||||||| ||||||||||||| |||||||||||||||||    
T  31234006 tacttctaaattattatttttcctttaatgaaaaataaaccaatagttgatta 31233954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 241 - 311
Target Start/End: Original strand, 43561408 - 43561478
Alignment:
Q  241 ctacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||||| ||||||||||||||||||||||||||||| |||  |||  ||||||| ||||||| | ||||||    
T  43561408 ctactttcaaagtattattttttctttaatgaaaaataaattaatgattgattaagataatttgataaaat 43561478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 259 - 300
Target Start/End: Complemental strand, 6116061 - 6116020
Alignment:
Q  259 tttttctttaatgaaaaacaaaccaatagttgattatgataa 300  Q
    ||||| |||||||||||||||||||||||||||||| |||||    
T  6116061 tttttttttaatgaaaaacaaaccaatagttgattaagataa 6116020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 311
Target Start/End: Complemental strand, 2375897 - 2375844
Alignment:
Q  258 ttttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    ||||||||||||||||||||||||||||  ||||||| || |||| | ||||||    
T  2375897 ttttttctttaatgaaaaacaaaccaatgattgattaagacaatttgataaaat 2375844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 142
Target Start/End: Complemental strand, 14234423 - 14234382
Alignment:
Q  101 taaataatacttcctcccttttaaaatgagtgtcgttttagc 142  Q
    |||| |||||||| ||| ||||||||||||||||||||||||    
T  14234423 taaaaaatacttcatccgttttaaaatgagtgtcgttttagc 14234382  T

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Target: scaffold0294 (Bit Score: 74; Significance: 8e-34; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 231 - 344
Target Start/End: Complemental strand, 3581 - 3469
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||| || |||||||||    
T  3581 ctatgttacactacttctaaagtattattttttctttaatgaaaaacaaaccaatagttgattaggataatttgataaaattgctataac-atttgacta 3483  T
Q  331 ctttattcgattca 344  Q
     ||||||| |||||    
T  3482 ttttattcaattca 3469  T

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Target: scaffold0110 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 231 - 343
Target Start/End: Complemental strand, 24817 - 24706
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||| |||||||||    
T  24817 ctatgttacaatacttccaaagtattatcttttctttaatgaaaaacaaaccaatagttgattaggatagtttggtaaaattgctatgac-atttgacta 24719  T
Q  331 ctttattcgattc 343  Q
     ||||||| ||||    
T  24718 ttttattccattc 24706  T

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Target: scaffold0048 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 236 - 343
Target Start/End: Original strand, 62714 - 62820
Alignment:
Q  236 ttacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactacttta 335  Q
    ||||||||||||||| |||||| || ||||||||||||||||||||||||||||||||| || |||| |||||||||| |||||| ||||||||||||||    
T  62714 ttacactacttccaaggtattacttcttctttaatgaaaaacaaaccaatagttgattaggacaatttggtaaaattgttatgac-atttgactacttta 62812  T
Q  336 ttcgattc 343  Q
    ||| ||||    
T  62813 ttccattc 62820  T

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Target: scaffold0565 (Bit Score: 63; Significance: 3e-27; HSPs: 2)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 231 - 321
Target Start/End: Complemental strand, 9718 - 9629
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgaca 321  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||| |||||||    
T  9718 ctatgttacactacttccaaa-tattattttttctttaatgaaaaacaactcaatagttgattatgataatttggtaaaattgttatgaca 9629  T

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Target: scaffold0565; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 237 - 311
Target Start/End: Complemental strand, 10026 - 9952
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    |||| |||||| ||| ||||||||||||||||| ||||||||||| |||||||||||| ||||||| ||||||||    
T  10026 tacaatacttcaaaaatattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 9952  T

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Target: scaffold0015 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 231 - 337
Target Start/End: Complemental strand, 21158 - 21053
Alignment:
Q  231 ctatattacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgacta 330  Q
    |||| ||||||||||||||||  |||||||| | |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||  ||||||||    
T  21158 ctatgttacactacttccaaatgattattttctttttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattgctatgac-gtttgacta 21060  T
Q  331 ctttatt 337  Q
     ||||||    
T  21059 ttttatt 21053  T

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Target: scaffold0502 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 237 - 311
Target Start/End: Complemental strand, 643 - 569
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    ||||||||||||||||||||||||||  |||||||||||| ||| ||||||||||||||||||||| ||||||||    
T  643 tacactacttccaaagtattatttttgttttaatgaaaaagaaatcaatagttgattatgataatttggtaaaat 569  T

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Target: scaffold0182 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 237 - 311
Target Start/End: Complemental strand, 18326 - 18252
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    ||||||| || |||||||||||||| ||||||||||||||||||||||||||||||||  |||||| | ||||||    
T  18326 tacactattttcaaagtattattttatctttaatgaaaaacaaaccaatagttgattaaaataatttgataaaat 18252  T

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Target: scaffold0136 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 240 - 311
Target Start/End: Original strand, 9628 - 9700
Alignment:
Q  240 actacttccaaagtattatttt-ttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    ||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||  |||||||    
T  9628 actactttcaaattattatttttttctttaatgaaaaacaaaccaatagttgattaggataatttagtaaaat 9700  T

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Target: scaffold0983 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0983
Description:

Target: scaffold0983; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 237 - 311
Target Start/End: Complemental strand, 758 - 684
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    ||||||| ||||||||  || ||||||||||||||||||||| | ||||||||||||| ||||||| ||||||||    
T  758 tacactaattccaaagacttgttttttctttaatgaaaaacatatcaatagttgattaagataatttggtaaaat 684  T

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Target: scaffold0300 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 237 - 311
Target Start/End: Original strand, 4646 - 4720
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    ||||||||||||||| |||||| ||| ||||||| ||||||||| ||||||||||||| |||| || ||||||||    
T  4646 tacactacttccaaaatattatatttactttaataaaaaacaaatcaatagttgattaggatagtttggtaaaat 4720  T

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Target: scaffold0026 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 237 - 311
Target Start/End: Original strand, 4222 - 4296
Alignment:
Q  237 tacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataattcggtaaaat 311  Q
    ||||||||||| |||||||| ||||| ||||||| |||||||||  |||||||||| | ||||||| ||||||||    
T  4222 tacactacttctaaagtattgtttttcctttaataaaaaacaaattaatagttgataaggataatttggtaaaat 4296  T

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Target: scaffold2107 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold2107
Description:

Target: scaffold2107; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 343
Target Start/End: Complemental strand, 418 - 350
Alignment:
Q  274 aaacaaaccaatagttgattatgataattcggtaaaattgctatgacaatttgactactttattcgattc 343  Q
    ||||||| ||||||||||||| ||||||  ||||||| ||  ||||| |||||||||||||||| |||||    
T  418 aaacaaatcaatagttgattaagataatgtggtaaaaatgtcatgac-atttgactactttatttgattc 350  T

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Target: scaffold0007 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 142
Target Start/End: Complemental strand, 158336 - 158295
Alignment:
Q  101 taaataatacttcctcccttttaaaatgagtgtcgttttagc 142  Q
    |||||| |||||| ||| ||||||||||||||||||||||||    
T  158336 taaatattacttcatccgttttaaaatgagtgtcgttttagc 158295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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