View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15317_low_20 (Length: 357)

Name: NF15317_low_20
Description: NF15317
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15317_low_20
NF15317_low_20
[»] chr8 (4 HSPs)
chr8 (47-341)||(29636711-29637005)
chr8 (126-293)||(41441152-41441320)
chr8 (114-175)||(41440516-41440577)
chr8 (200-255)||(39978305-39978361)
[»] chr1 (8 HSPs)
chr1 (125-296)||(33942074-33942246)
chr1 (47-185)||(50269307-50269444)
chr1 (44-105)||(46209533-46209594)
chr1 (114-175)||(33851004-33851065)
chr1 (114-175)||(33942913-33942974)
chr1 (47-195)||(46208009-46208156)
chr1 (204-255)||(35477734-35477786)
chr1 (126-190)||(35477608-35477672)
[»] chr2 (10 HSPs)
chr2 (46-185)||(45231485-45231624)
chr2 (42-105)||(5326191-5326254)
chr2 (46-185)||(45230040-45230180)
chr2 (47-154)||(20193174-20193280)
chr2 (46-103)||(19194073-19194130)
chr2 (60-184)||(5327168-5327292)
chr2 (46-105)||(20188308-20188367)
chr2 (47-102)||(35844940-35844995)
chr2 (114-185)||(39673782-39673852)
chr2 (46-103)||(35935367-35935424)
[»] chr5 (6 HSPs)
chr5 (45-190)||(37253398-37253543)
chr5 (48-154)||(21550031-21550137)
chr5 (50-102)||(21550365-21550417)
chr5 (44-103)||(38545504-38545563)
chr5 (88-187)||(37256016-37256114)
chr5 (200-255)||(37253603-37253659)
[»] chr4 (8 HSPs)
chr4 (50-185)||(47489273-47489407)
chr4 (44-185)||(47487831-47487971)
chr4 (200-255)||(34487063-34487119)
chr4 (49-96)||(51986232-51986279)
chr4 (52-103)||(32335851-32335902)
chr4 (125-192)||(34486937-34487004)
chr4 (115-185)||(51987152-51987222)
chr4 (125-186)||(38229396-38229457)
[»] chr7 (10 HSPs)
chr7 (42-189)||(28086467-28086613)
chr7 (48-187)||(28087666-28087805)
chr7 (43-105)||(33734979-33735040)
chr7 (115-187)||(44255540-44255611)
chr7 (45-105)||(1920931-1920991)
chr7 (43-103)||(24730981-24731041)
chr7 (200-255)||(28086676-28086732)
chr7 (47-103)||(45782021-45782077)
chr7 (46-189)||(33736013-33736154)
chr7 (47-100)||(9154297-9154350)
[»] chr3 (9 HSPs)
chr3 (47-190)||(22341231-22341374)
chr3 (126-190)||(22341767-22341830)
chr3 (36-184)||(53195543-53195691)
chr3 (45-102)||(37282952-37283009)
chr3 (46-103)||(2683198-2683255)
chr3 (200-255)||(22341659-22341715)
chr3 (50-105)||(46692968-46693023)
chr3 (200-245)||(53196826-53196872)
chr3 (127-192)||(53196923-53196988)
[»] chr6 (3 HSPs)
chr6 (44-184)||(655523-655663)
chr6 (46-103)||(9362741-9362798)
chr6 (43-100)||(13118569-13118626)
[»] scaffold0169 (1 HSPs)
scaffold0169 (44-105)||(24999-25060)
[»] scaffold0010 (1 HSPs)
scaffold0010 (46-103)||(128350-128407)
[»] scaffold0210 (4 HSPs)
scaffold0210 (200-255)||(19219-19275)
scaffold0210 (200-255)||(27111-27167)
scaffold0210 (115-186)||(19091-19162)
scaffold0210 (115-186)||(26983-27054)
[»] scaffold0005 (1 HSPs)
scaffold0005 (47-103)||(205185-205241)


Alignment Details
Target: chr8 (Bit Score: 239; Significance: 1e-132; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 47 - 341
Target Start/End: Complemental strand, 29637005 - 29636711
Alignment:
Q  47 ggctaaaatgcacttttggccctctatgtttggctccgtatcaattttggccccctattnnnnnnnnccactttccaaccccctaatttcaccccctttt 146  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||||          |||||||| ||||||||||||||||||||||    
T  29637005 ggctaaaatgcacttttggccctctatatttggctccgtagcaattttgaccccctattaaaaaaaaatactttccagccccctaatttcaccccctttt 29636906  T
Q  147 gcaactcacaagccccctctaattttgactcggtcaaaggccacatggctcaagattaaaaatcaatggtcaaaattaaaagaatcacatgctccctctc 246  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  29636905 gcaactcacatgccccctctaattttgactcggtcaaaggccacatggctcaagattaaaaatcaatggtcaagattaaaagaatcacatgctccctctc 29636806  T
Q  247 ttagctaatagttttctttaaaaccaattacatttcatcttcttcaacctgcataagtcacttgtactcatctccttctctcccgcgccattttc 341  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29636805 ttagctaatagttttctttaaaaccaattacatttcatcttcttcaacctgcataagtcacttgtactcatctccttctctcccgcgccattttc 29636711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 126 - 293
Target Start/End: Complemental strand, 41441320 - 41441152
Alignment:
Q  126 cccctaatttcacccccttttgcaactcacaagccccctctaattttgactcggtcaaaggccacatggctcaagattaaaaatcaatggtcaaaattaa 225  Q
    ||||||| |||| |||||||| ||||||| | |||||||||||||||||   ||||||||||||  |||||||||||||||||| | ||||||| |||||    
T  41441320 cccctaacttcatccccttttacaactcataggccccctctaattttgatcgggtcaaaggccatgtggctcaagattaaaaattagtggtcaagattaa 41441221  T
Q  226 aagaa-tcacatgctccctctcttagctaatagttttctttaaaaccaattacatttcatcttcttcaa 293  Q
    || || ||||||||||| |||||||||||||| ||||| ||||| ||| ||||||||||||||||||||    
T  41441220 aataactcacatgctccttctcttagctaatacttttccttaaacccatttacatttcatcttcttcaa 41441152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 114 - 175
Target Start/End: Original strand, 41440516 - 41440577
Alignment:
Q  114 ccactttccaaccccctaatttcacccccttttgcaactcacaagccccctctaattttgac 175  Q
    ||||||| || |||||||| ||||||||||||||||||||| | | | ||||||||||||||    
T  41440516 ccacttttcagccccctaacttcacccccttttgcaactcataggtctcctctaattttgac 41440577  T

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Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 255
Target Start/End: Complemental strand, 39978361 - 39978305
Alignment:
Q  200 gattaaaaatcaatggtcaaaattaaaagaa-tcacatgctccctctcttagctaat 255  Q
    |||||||||| ||||||||| ||||||||   |||||||||||||||||||||||||    
T  39978361 gattaaaaattaatggtcaagattaaaagtcctcacatgctccctctcttagctaat 39978305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 93; Significance: 3e-45; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 125 - 296
Target Start/End: Original strand, 33942074 - 33942246
Alignment:
Q  125 ccccctaatttcacccccttttgcaactcacaagccccctctaattttgactcggtcaaaggccacatggctcaagattaaaaatcaatggtcaaaatta 224  Q
    |||||||| |||| |||||||| ||||||| | |||||||||||||| ||   ||||||||||||  |||||||||||||||||||| ||||||| ||||    
T  33942074 ccccctaacttcatccccttttacaactcataggccccctctaatttcgatcgggtcaaaggccatgtggctcaagattaaaaatcagtggtcaagatta 33942173  T
Q  225 aaagaa-tcacatgctccctctcttagctaatagttttctttaaaaccaattacatttcatcttcttcaacct 296  Q
    ||| || |||||||||||||||||||||||||| ||||| ||||| ||| |||||||||||||||||||||||    
T  33942174 aaataactcacatgctccctctcttagctaatacttttccttaaacccatttacatttcatcttcttcaacct 33942246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 47 - 185
Target Start/End: Original strand, 50269307 - 50269444
Alignment:
Q  47 ggctaaaatgcacttttggccctctatgtttggctccgtatcaattttggccccctattnnnnnnnnccactttccaaccccctaatttcaccccctttt 146  Q
    |||||||||||||||||| ||| ||||||||  || |||| ||||||||||||| ||||         ||||||||| ||||||||||||||||||||||    
T  50269307 ggctaaaatgcacttttgaccccctatgtttaccttcgtagcaattttggcccc-tattaaaaaaaatcactttccagccccctaatttcaccccctttt 50269405  T
Q  147 gcaactcacaagccccctctaattttgactcggtcaaag 185  Q
    ||||||||    |||||||| ||||||||| ||||||||    
T  50269406 gcaactcagtgaccccctctgattttgactgggtcaaag 50269444  T

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Target: chr1; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 44 - 105
Target Start/End: Complemental strand, 46209594 - 46209533
Alignment:
Q  44 ttaggctaaaatgcacttttggccctctatgtttggctccgtatcaattttggccccctatt 105  Q
    |||||||||||||||||||| |||| ||||||||||||||||| ||||||||||| ||||||    
T  46209594 ttaggctaaaatgcacttttagccccctatgtttggctccgtagcaattttggcctcctatt 46209533  T

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Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 114 - 175
Target Start/End: Original strand, 33851004 - 33851065
Alignment:
Q  114 ccactttccaaccccctaatttcacccccttttgcaactcacaagccccctctaattttgac 175  Q
    ||||||| || |||||||| ||| ||||||||||||||||| | ||||||||||||||||||    
T  33851004 ccacttttcagccccctaacttcgcccccttttgcaactcataggccccctctaattttgac 33851065  T

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Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 114 - 175
Target Start/End: Complemental strand, 33942974 - 33942913
Alignment:
Q  114 ccactttccaaccccctaatttcacccccttttgcaactcacaagccccctctaattttgac 175  Q
    ||||||| || |||||||| ||| ||||||||||||||||| | ||||||||||||||||||    
T  33942974 ccacttttcagccccctaacttcgcccccttttgcaactcataggccccctctaattttgac 33942913  T

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Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 195
Target Start/End: Original strand, 46208009 - 46208156
Alignment:
Q  47 ggctaaaatgcacttttggccctctatgtttggctccgtatcaattttggccccctattnnnnnnnnccactttccaaccccctaatttcaccccctttt 146  Q
    |||||||||||| |||||  ||||||||||||| || ||| ||||||||||||||||||        | ||||||||  |||| || |||||||| ||||    
T  46208009 ggctaaaatgcatttttgatcctctatgtttggttctgtagcaattttggccccctatt-aaaaaaacaactttccagacccccaacttcaccccttttt 46208107  T
Q  147 gcaactcacaagccccctctaattttgactcggtcaaaggccacatggc 195  Q
    ||||||||    |||||||  ||||||||| |||||||| |||| ||||    
T  46208108 gcaactcagtgaccccctcctattttgactaggtcaaagcccacgtggc 46208156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 255
Target Start/End: Original strand, 35477734 - 35477786
Alignment:
Q  204 aaaaatcaatggtcaaaattaaaagaat-cacatgctccctctcttagctaat 255  Q
    |||||| ||||||||| |||||||| || ||||||||||||||||||||||||    
T  35477734 aaaaattaatggtcaagattaaaagtattcacatgctccctctcttagctaat 35477786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 190
Target Start/End: Original strand, 35477608 - 35477672
Alignment:
Q  126 cccctaatttcacccccttttgcaactcacaagccccctctaattttgactcggtcaaaggccac 190  Q
    ||||||| ||| |||||||||||||| || | |||| || |||||||||  ||||||||||||||    
T  35477608 cccctaacttcccccccttttgcaacccataggccctctttaattttgatccggtcaaaggccac 35477672  T

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Target: chr2 (Bit Score: 72; Significance: 1e-32; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 46 - 185
Target Start/End: Complemental strand, 45231624 - 45231485
Alignment:
Q  46 aggctaaaatgcacttttggccctctatgtttggctccgtatcaattttggccccctattnnnnnnnnccactttccaaccccctaatttcacccccttt 145  Q
    ||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||         |||||||||||||||||| ||||||||||||    
T  45231624 aggctaaaatgcacttttggccccctatgttaggctccgtagcaattttggccccctattaaaaacaatcactttccaaccccctaacttcacccccttt 45231525  T
Q  146 tgcaactcacaagccccctctaattttgactcggtcaaag 185  Q
    |||||| || | ||||||||| ||||||||  ||||||||    
T  45231524 tgcaacccataggccccctctgattttgaccgggtcaaag 45231485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 42 - 105
Target Start/End: Original strand, 5326191 - 5326254
Alignment:
Q  42 tattaggctaaaatgcacttttggccctctatgtttggctccgtatcaattttggccccctatt 105  Q
    ||||||||||||||||||||||||||| |||| |||||||| ||| ||||||||||| ||||||    
T  5326191 tattaggctaaaatgcacttttggccccctatatttggctctgtagcaattttggcctcctatt 5326254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 46 - 185
Target Start/End: Original strand, 45230040 - 45230180
Alignment:
Q  46 aggctaaaatgcacttttggccctctatgtttggctccgtatcaattttggccccctattnnnnnnnnccactttccaaccccc-taatttcaccccctt 144  Q
    ||||||||||||||||||||| | |||||||||||| ||||  ||||||||| || ||||         |||||| || ||||| ||  |||||||||||    
T  45230040 aggctaaaatgcacttttggctccctatgtttggcttcgtagtaattttggctccttattaaaaaaaatcacttttcagcccccctaccttcaccccctt 45230139  T
Q  145 ttgcaactcacaagccccctctaattttgactcggtcaaag 185  Q
    |||||||||| | ||||||||| ||||||||  ||||||||    
T  45230140 ttgcaactcagaggccccctctgattttgaccgggtcaaag 45230180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 154
Target Start/End: Complemental strand, 20193280 - 20193174
Alignment:
Q  47 ggctaaaatgcacttttggccctctatgtttggctccgtatcaattttggccccctattnnnnnnnnccactttccaaccccctaatttcaccccctttt 146  Q
    ||||||||||||||||||| || ||| ||||||| ||||| ||||||||||||||||||          |||||||| ||||| || |||||||||||||    
T  20193280 ggctaaaatgcacttttggtcccctaagtttggccccgtagcaattttggccccctattaaaaaaaaaaactttccagccccc-aacttcaccccctttt 20193182  T
Q  147 gcaactca 154  Q
    ||||||||    
T  20193181 gcaactca 20193174  T

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Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 46 - 103
Target Start/End: Original strand, 19194073 - 19194130
Alignment:
Q  46 aggctaaaatgcacttttggccctctatgtttggctccgtatcaattttggcccccta 103  Q
    ||||| ||||||||||||||||| ||||||||| || |||| ||||||||||||||||    
T  19194073 aggcttaaatgcacttttggccccctatgtttgtcttcgtagcaattttggcccccta 19194130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 60 - 184
Target Start/End: Complemental strand, 5327292 - 5327168
Alignment:
Q  60 ttttggccctctatgtttggctccgtatcaattttggccccctattnnnnnnnnccactttccaaccccctaatttcacccccttttgcaactcacaagc 159  Q
    |||||||||  ||| ||||||||||||  |||||||||||||||||         ||||||| | ||||||||||| |||||||||||||| ||| | |     
T  5327292 ttttggccccttatatttggctccgtagtaattttggccccctattaaaaaaagtcactttctagccccctaattttacccccttttgcaattcataggg 5327193  T
Q  160 cccctctaattttgactcggtcaaa 184  Q
    ||||||| |||||||  ||||||||    
T  5327192 cccctcttattttgatccggtcaaa 5327168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 105
Target Start/End: Original strand, 20188308 - 20188367
Alignment:
Q  46 aggctaaaatgcacttttggccctctatgtttggctccgtatcaattttggccccctatt 105  Q
    |||||||||||||||||| |||| |||  |||||| ||||| ||||||||||||||||||    
T  20188308 aggctaaaatgcactttttgccccctaaatttggccccgtagcaattttggccccctatt 20188367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 102
Target Start/End: Complemental strand, 35844995 - 35844940
Alignment:
Q  47 ggctaaaatgcacttttggccctctatgtttggctccgtatcaattttggccccct 102  Q
    |||| ||||||| ||||||||||||||||||| || |||| |||||||| ||||||    
T  35844995 ggcttaaatgcatttttggccctctatgtttgccttcgtagcaattttgaccccct 35844940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 114 - 185
Target Start/End: Original strand, 39673782 - 39673852
Alignment:
Q  114 ccactttccaaccccctaatttcacccccttttgcaactcacaagccccctctaattttgactcggtcaaag 185  Q
    |||||||| |||||||||| ||  |||||||||||||||||  || ||||| |||||||||| |||||||||    
T  39673782 ccactttcgaaccccctaactttgcccccttttgcaactca-tagacccctttaattttgacccggtcaaag 39673852  T

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Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 103
Target Start/End: Original strand, 35935367 - 35935424
Alignment:
Q  46 aggctaaaatgcacttttggccctctatgtttggctccgtatcaattttggcccccta 103  Q
    ||||| ||||||||||||||||| |||| |||| |  |||| ||||||||||||||||    
T  35935367 aggcttaaatgcacttttggccccctatatttgccgtcgtagcaattttggcccccta 35935424  T

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Target: chr5 (Bit Score: 70; Significance: 2e-31; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 45 - 190
Target Start/End: Original strand, 37253398 - 37253543
Alignment:
Q  45 taggctaaaatgcacttttggccctctatgtttggctccgtatcaattttggccccctattnnnnnnnnccactttccaaccccctaatttcaccccctt 144  Q
    |||||||||||||| ||||| || |||||||||||||| ||| ||||||||||||| ||||         |||||||||||||||||| |||||||||||    
T  37253398 taggctaaaatgcatttttgaccttctatgtttggctctgtagcaattttggccccttattaaaaaatatcactttccaaccccctaacttcaccccctt 37253497  T
Q  145 ttgcaactcacaagccccctctaattttgactcggtcaaaggccac 190  Q
    |||||| | | | |||||||||||||||||| ||||||||||||||    
T  37253498 ttgcaatttataggccccctctaattttgacccggtcaaaggccac 37253543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 48 - 154
Target Start/End: Original strand, 21550031 - 21550137
Alignment:
Q  48 gctaaaatgcacttttggccctctatgtttggctccgtatcaattttggccccctattnnnnnnnnccactttccaaccccctaatttcacccccttttg 147  Q
    ||||||||||||||||||||| ||||||||||| ||||| ||||||||| ||||| ||          ||||| || ||||| |||||||||||||||||    
T  21550031 gctaaaatgcacttttggccccctatgtttggccccgtagcaattttgggcccctgttaaaaaaactaacttttcagccccccaatttcacccccttttg 21550130  T
Q  148 caactca 154  Q
    |||||||    
T  21550131 caactca 21550137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 50 - 102
Target Start/End: Complemental strand, 21550417 - 21550365
Alignment:
Q  50 taaaatgcacttttggccctctatgtttggctccgtatcaattttggccccct 102  Q
    |||||||||||||||||| |||||||||||| ||||| ||||||||| |||||    
T  21550417 taaaatgcacttttggccgtctatgtttggcaccgtagcaattttggtcccct 21550365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 38545563 - 38545504
Alignment:
Q  44 ttaggctaaaatgcacttttggccctctatgtttggctccgtatcaattttggcccccta 103  Q
    ||||||| ||||| ||||||||||||||||||||| | ||||| ||||||| ||||||||    
T  38545563 ttaggcttaaatgtacttttggccctctatgtttgccaccgtagcaattttagcccccta 38545504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 88 - 187
Target Start/End: Complemental strand, 37256114 - 37256016
Alignment:
Q  88 caattttggccccctattnnnnnnnnccactttccaaccccctaatttcacccccttttgcaactcacaagccccctctaattttgactcggtcaaaggc 187  Q
    ||||||||||||||||||        |||||||||| |||| |||||| |||||||||||||||| | | ||| ||||| ||||||||  ||||||||||    
T  37256114 caattttggccccctattaaaaaaaaccactttccagcccc-taattttacccccttttgcaacttataggcctcctctgattttgaccaggtcaaaggc 37256016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 255
Target Start/End: Original strand, 37253603 - 37253659
Alignment:
Q  200 gattaaaaatcaatggtcaaaattaaaagaat-cacatgctccctctcttagctaat 255  Q
    |||||||| | | ||||||| |||||||| || ||||||||||||||||||||||||    
T  37253603 gattaaaatttagtggtcaagattaaaagtattcacatgctccctctcttagctaat 37253659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 64; Significance: 6e-28; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 50 - 185
Target Start/End: Complemental strand, 47489407 - 47489273
Alignment:
Q  50 taaaatgcacttttggccctctatgtttggctccgtatcaattttggccccctattnnnnnnnnccactttccaaccccctaatttcacccccttttgca 149  Q
    ||||||||||||||||||| ||||||| ||||||||| ||||||||||||| ||||         |||||||||||||||||| ||||||||||||||||    
T  47489407 taaaatgcacttttggccc-ctatgttaggctccgtagcaattttggccccatattaaaaaaaatcactttccaaccccctaacttcacccccttttgca 47489309  T
Q  150 actcacaagccccctctaattttgactcggtcaaag 185  Q
    || || ||||||||||| ||||||||  ||||||||    
T  47489308 acccataagccccctctgattttgaccaggtcaaag 47489273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 44 - 185
Target Start/End: Original strand, 47487831 - 47487971
Alignment:
Q  44 ttaggctaaaatgcacttttggccctctatgtttggctccgtatcaattttggccccctattnnnnnnnnccactttccaaccccctaatttcaccccct 143  Q
    ||||||||||||||||||||| ||| |||||||||||| |||| ||||||||||||| ||||         |||||| || |||||||| | || |||||    
T  47487831 ttaggctaaaatgcacttttgaccccctatgtttggcttcgtagcaattttggccccttattaaaaaaaatcacttttcagccccctaactcca-cccct 47487929  T
Q  144 tttgcaactcacaagccccctctaattttgactcggtcaaag 185  Q
    ||||||||||| | ||||||||| ||||||||  ||||||||    
T  47487930 tttgcaactcagaggccccctcttattttgaccgggtcaaag 47487971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 200 - 255
Target Start/End: Original strand, 34487063 - 34487119
Alignment:
Q  200 gattaaaaatcaatggtcaaaattaaaagaa-tcacatgctccctctcttagctaat 255  Q
    |||||||||||||||||||| |||||||||| ||||||||||||| || ||||||||    
T  34487063 gattaaaaatcaatggtcaagattaaaagaactcacatgctccctgtcctagctaat 34487119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 49 - 96
Target Start/End: Original strand, 51986232 - 51986279
Alignment:
Q  49 ctaaaatgcacttttggccctctatgtttggctccgtatcaattttgg 96  Q
    ||||||||||||||||| |||||||||||| ||||||| |||||||||    
T  51986232 ctaaaatgcacttttggtcctctatgtttgactccgtagcaattttgg 51986279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 52 - 103
Target Start/End: Original strand, 32335851 - 32335902
Alignment:
Q  52 aaatgcacttttggccctctatgtttggctccgtatcaattttggcccccta 103  Q
    ||||||||||||||||| ||||||||| | ||||| ||||||| ||||||||    
T  32335851 aaatgcacttttggccccctatgtttgccaccgtagcaattttagcccccta 32335902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 125 - 192
Target Start/End: Original strand, 34486937 - 34487004
Alignment:
Q  125 ccccctaatttcacccccttttgcaactcacaagccccctctaattttgactcggtcaaaggccacat 192  Q
    |||||||| ||||||||||||||||||||| | |||| |||| |||| ||   |||||||||||||||    
T  34486937 ccccctaacttcacccccttttgcaactcatatgccctctctgatttagatctggtcaaaggccacat 34487004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 185
Target Start/End: Complemental strand, 51987222 - 51987152
Alignment:
Q  115 cactttccaaccccctaatttcacccccttttgcaactcacaagccccctctaattttgactcggtcaaag 185  Q
    |||||| | ||||||||| ||||| ||||||||||||||| |  |||||||| ||||||||| | ||||||    
T  51987222 cacttttcgaccccctaacttcacacccttttgcaactcatagaccccctctgattttgactggatcaaag 51987152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 186
Target Start/End: Original strand, 38229396 - 38229457
Alignment:
Q  125 ccccctaatttcacccccttttgcaactcacaagccccctctaattttgactcggtcaaagg 186  Q
    |||||||| |||| |  |||||||||| || ||||||||||| ||||||||| |||||||||    
T  38229396 ccccctaacttcatctgcttttgcaacccataagccccctctgattttgacttggtcaaagg 38229457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 4e-23; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 42 - 189
Target Start/End: Original strand, 28086467 - 28086613
Alignment:
Q  42 tattaggctaaaatgcacttttggccctctatgtttggctccgtatcaattttggccccctattnnnnnnnnccactttccaaccccctaatttcacccc 141  Q
    ||||||||||||||||||||||| |||  |||||||||||| ||| |||||||||||||| |||         || |||||| |||||||| ||||||||    
T  28086467 tattaggctaaaatgcacttttgcccccttatgtttggctctgtagcaattttggcccccgattaaaaaaaatcattttccagccccctaacttcacccc 28086566  T
Q  142 cttttgcaactcacaagccccctctaattttgactcggtcaaaggcca 189  Q
    ||||||||||| |  || ||||||||||||| ||| ||||||||||||    
T  28086567 cttttgcaactta-taggcccctctaattttcacttggtcaaaggcca 28086613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 48 - 187
Target Start/End: Complemental strand, 28087805 - 28087666
Alignment:
Q  48 gctaaaatgcacttttggccctctatgtttggctccgtatcaattttggccccctattnnnnnnnnccactttccaaccccctaatttcacccccttttg 147  Q
    |||||||||||||||||||||  ||| |||| ||||||| ||||||||||| | ||||         ||||||||| |||||||| ||| ||| ||||||    
T  28087805 gctaaaatgcacttttggccccttatatttgactccgtagcaattttggcctcatattaaaaaaaaacactttccagccccctaacttcgcccacttttg 28087706  T
Q  148 caactcacaagccccctctaattttgactcggtcaaaggc 187  Q
    ||||||| | |||||||||||||||||| | |||||||||    
T  28087705 caactcataggccccctctaattttgacccagtcaaaggc 28087666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 43 - 105
Target Start/End: Original strand, 33734979 - 33735040
Alignment:
Q  43 attaggctaaaatgcacttttggccctctatgtttggctccgtatcaattttggccccctatt 105  Q
    |||||||||||||||| ||||| |||| ||||||||||| ||||||||||||||| |||||||    
T  33734979 attaggctaaaatgcatttttgcccct-tatgtttggctgcgtatcaattttggctccctatt 33735040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 115 - 187
Target Start/End: Original strand, 44255540 - 44255611
Alignment:
Q  115 cactttccaaccccctaatttcacccccttttgcaactcacaagccccctctaattttgactcggtcaaaggc 187  Q
    ||||||||| |||||||| || |||||||||||||| ||| | || ||||||||||||||| |||||||||||    
T  44255540 cactttccagccccctaactt-acccccttttgcaattcatatgctccctctaattttgacccggtcaaaggc 44255611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 105
Target Start/End: Original strand, 1920931 - 1920991
Alignment:
Q  45 taggctaaaatgcacttttggccctctatgtttggctccgtatcaattttggccccctatt 105  Q
    |||||| ||| ||||||||||||| ||||||||| |  |||| ||||||||||||||||||    
T  1920931 taggcttaaacgcacttttggccccctatgtttgccatcgtaacaattttggccccctatt 1920991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 103
Target Start/End: Complemental strand, 24731041 - 24730981
Alignment:
Q  43 attaggctaaaatgcacttttggccctctatgtttggctccgtatcaattttggcccccta 103  Q
    |||||||| ||||| |||||||| || ||||||||| | ||||| ||||||||||||||||    
T  24731041 attaggcttaaatgtacttttggtcccctatgtttgtcaccgtagcaattttggcccccta 24730981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 255
Target Start/End: Original strand, 28086676 - 28086732
Alignment:
Q  200 gattaaaaatcaatggtcaaaattaaaagaat-cacatgctccctctcttagctaat 255  Q
    |||||||||| | ||||||| |||||||| || ||||||||||||||||||||||||    
T  28086676 gattaaaaattagtggtcaagattaaaagtattcacatgctccctctcttagctaat 28086732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 103
Target Start/End: Original strand, 45782021 - 45782077
Alignment:
Q  47 ggctaaaatgcacttttggccctctatgtttggctccgtatcaattttggcccccta 103  Q
    |||| |||||||||||||| || ||||||||| | ||||| ||||||||||||||||    
T  45782021 ggcttaaatgcacttttggtcccctatgtttgccaccgtagcaattttggcccccta 45782077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 46 - 189
Target Start/End: Complemental strand, 33736154 - 33736013
Alignment:
Q  46 aggctaaaatgcacttttggccctctatgtttggctccgtatcaattttggccccctattnnnnnnnnccactttccaaccccctaatttcacccccttt 145  Q
    ||||||||||  ||||||| ||| ||| ||||||||||||| |||||||   ||||||||         ||||||||||||||||||||| |||| ||||    
T  33736154 aggctaaaatatacttttgaccc-ctacgtttggctccgtagcaattttaatcccctattaaaaaaaatcactttccaaccccctaattttacccgcttt 33736056  T
Q  146 tgcaactcacaagccccctctaattttgactcggtcaaaggcca 189  Q
    ||||| |||  || ||||||| |||||| |  ||||||||||||    
T  33736055 tgcaattca-taggcccctctgattttggccaggtcaaaggcca 33736013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 100
Target Start/End: Original strand, 9154297 - 9154350
Alignment:
Q  47 ggctaaaatgcacttttggccctctatgtttggctccgtatcaattttggcccc 100  Q
    |||| ||||||||||||| ||||||||||||| |  |||| |||||||||||||    
T  9154297 ggcttaaatgcacttttgaccctctatgtttgccatcgtagcaattttggcccc 9154350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 4e-23; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 47 - 190
Target Start/End: Original strand, 22341231 - 22341374
Alignment:
Q  47 ggctaaaatgcacttttggccctctatgtttggctccgtatcaattttggccccctattnnnnnnnnccactttccaaccccctaatttcaccccctttt 146  Q
    |||||||||||||||||| ||| |||| ||||||||| || ||||||||| |  |||||         ||||||||| |||||||| |||||||| ||||    
T  22341231 ggctaaaatgcacttttgaccccctatatttggctccatagcaattttggtcttctattaaaaaaaatcactttccagccccctaacttcaccccttttt 22341330  T
Q  147 gcaactcacaagccccctctaattttgactcggtcaaaggccac 190  Q
    |||| ||| ||||||||| |||||||||| ||||||||||||||    
T  22341331 gcaattcataagccccctataattttgacccggtcaaaggccac 22341374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 126 - 190
Target Start/End: Complemental strand, 22341830 - 22341767
Alignment:
Q  126 cccctaatttcacccccttttgcaactcacaagccccctctaattttgactcggtcaaaggccac 190  Q
    ||||||| ||||||||||||||||||||| |||||||| ||||||||||  ||||||||||||||    
T  22341830 cccctaacttcacccccttttgcaactcataagccccc-ctaattttgatccggtcaaaggccac 22341767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 184
Target Start/End: Original strand, 53195543 - 53195691
Alignment:
Q  36 aataactattaggctaaaatgcacttttggccctctatgtttggctccgtatcaattttggccccctattnnnnnnnnccactttccaaccccctaattt 135  Q
    ||||| ||||||| | |||||||||||||||||| ||| |||| |   ||| ||||||||| ||||||||        ||| ||| || |||||||| ||    
T  53195543 aataattattaggtttaaatgcacttttggccctttatatttgccatggtagcaattttggtcccctattaaaaaaaaccaattttcagccccctaactt 53195642  T
Q  136 cacccccttttgcaactcacaagccccctctaattttgactcggtcaaa 184  Q
    ||||||||||||||||| | | | ||||||| |||||||| ||||||||    
T  53195643 cacccccttttgcaacttataggtcccctctgattttgacccggtcaaa 53195691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 102
Target Start/End: Original strand, 37282952 - 37283009
Alignment:
Q  45 taggctaaaatgcacttttggccctctatgtttggctccgtatcaattttggccccct 102  Q
    |||||||||||||||||||| |||  ||||||||||||||||  ||||||||||||||    
T  37282952 taggctaaaatgcacttttgaccccttatgtttggctccgtagtaattttggccccct 37283009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 46 - 103
Target Start/End: Complemental strand, 2683255 - 2683198
Alignment:
Q  46 aggctaaaatgcacttttggccctctatgtttggctccgtatcaattttggcccccta 103  Q
    ||||| ||||||||||||||||| |||| |||| | ||||| ||||||||||||||||    
T  2683255 aggcttaaatgcacttttggccccctatatttgccaccgtagcaattttggcccccta 2683198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 255
Target Start/End: Complemental strand, 22341715 - 22341659
Alignment:
Q  200 gattaaaaatcaatggtcaaaattaaaagaat-cacatgctccctctcttagctaat 255  Q
    |||||||||| | ||||||| |||||||| || ||||||||||||||||||||||||    
T  22341715 gattaaaaattagtggtcaagattaaaagtattcacatgctccctctcttagctaat 22341659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 50 - 105
Target Start/End: Original strand, 46692968 - 46693023
Alignment:
Q  50 taaaatgcacttttggccctctatgtttggctccgtatcaattttggccccctatt 105  Q
    ||||||||||||||||||| ||| |||||||||||||  |||||| | ||||||||    
T  46692968 taaaatgcacttttggccccctaagtttggctccgtagtaatttttggcccctatt 46693023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 245
Target Start/End: Complemental strand, 53196872 - 53196826
Alignment:
Q  200 gattaaaaatcaatggtcaaaattaaaagaa-tcacatgctccctct 245  Q
    |||||||||||||||||||  |||||||||| |||||||||||||||    
T  53196872 gattaaaaatcaatggtcaggattaaaagaactcacatgctccctct 53196826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 192
Target Start/End: Complemental strand, 53196988 - 53196923
Alignment:
Q  127 ccctaatttcacccccttttgcaactcacaagccccctctaattttgactcggtcaaaggccacat 192  Q
    |||||| |||||||| |||||||||||| | |||  |||| ||||||||  |||||||||||||||    
T  53196988 ccctaacttcaccccattttgcaactcataggccgtctctgattttgacctggtcaaaggccacat 53196923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 6e-19; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 44 - 184
Target Start/End: Original strand, 655523 - 655663
Alignment:
Q  44 ttaggctaaaatgcacttttggccctctatgtttggctccgtatcaattttggccccctattnnnnnnnnccactttccaaccccctaatttcaccccct 143  Q
    ||||||| ||||||||||||||||| ||||||||| |   ||| ||||||||||||||||||         ||||||| | |||||||| ||||||||||    
T  655523 ttaggcttaaatgcacttttggccccctatgtttgccatggtagcaattttggccccctattaaaaaaaatcactttctagccccctaacttcaccccct 655622  T
Q  144 tttgcaactcacaagccccctctaattttgactcggtcaaa 184  Q
    ||||||||||| |  |||||||| ||||||||  |||||||    
T  655623 tttgcaactcatagaccccctctgattttgacagggtcaaa 655663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 46 - 103
Target Start/End: Original strand, 9362741 - 9362798
Alignment:
Q  46 aggctaaaatgcacttttggccctctatgtttggctccgtatcaattttggcccccta 103  Q
    ||||| ||||||||||||||||| ||||||||| | ||||| ||||||||| ||||||    
T  9362741 aggcttaaatgcacttttggcccactatgtttgccgccgtagcaattttggtccccta 9362798  T

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Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 100
Target Start/End: Complemental strand, 13118626 - 13118569
Alignment:
Q  43 attaggctaaaatgcacttttggccctctatgtttggctccgtatcaattttggcccc 100  Q
    |||||||| |||||||||| ||||||  |||||||| | ||||| |||||||||||||    
T  13118626 attaggcttaaatgcacttatggccccttatgtttgtcaccgtagcaattttggcccc 13118569  T

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Target: scaffold0169 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 105
Target Start/End: Original strand, 24999 - 25060
Alignment:
Q  44 ttaggctaaaatgcacttttggccctctatgtttggctccgtatcaattttggccccctatt 105  Q
    ||||||||||||||||||||||||| ||||||||| |  |||| ||||||||||| ||||||    
T  24999 ttaggctaaaatgcacttttggccccctatgtttgaccacgtagcaattttggcctcctatt 25060  T

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Target: scaffold0010 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 46 - 103
Target Start/End: Original strand, 128350 - 128407
Alignment:
Q  46 aggctaaaatgcacttttggccctctatgtttggctccgtatcaattttggcccccta 103  Q
    ||||| ||||||||||||||||| ||||||||| |  |||||||||||||||||||||    
T  128350 aggcttaaatgcacttttggccccctatgtttgccgtcgtatcaattttggcccccta 128407  T

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Target: scaffold0210 (Bit Score: 37; Significance: 0.000000000008; HSPs: 4)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 200 - 255
Target Start/End: Original strand, 19219 - 19275
Alignment:
Q  200 gattaaaaatcaatggtcaaaattaaaag-aatcacatgctccctctcttagctaat 255  Q
    |||||||||||||||||||| |||||||| ||||||||||||||| |||||| ||||    
T  19219 gattaaaaatcaatggtcaagattaaaagaaatcacatgctccctatcttaggtaat 19275  T

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Target: scaffold0210; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 200 - 255
Target Start/End: Original strand, 27111 - 27167
Alignment:
Q  200 gattaaaaatcaatggtcaaaattaaaag-aatcacatgctccctctcttagctaat 255  Q
    |||||||||||||||||||| |||||||| ||||||||||||||| |||||| ||||    
T  27111 gattaaaaatcaatggtcaagattaaaagaaatcacatgctccctatcttaggtaat 27167  T

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Target: scaffold0210; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 115 - 186
Target Start/End: Original strand, 19091 - 19162
Alignment:
Q  115 cactttccaaccccctaatttcacccccttttgcaactcacaagccccctctaattttgactcggtcaaagg 186  Q
    |||||||||||||||||| ||   |||||||||||| ||| | | ||||||| |||||||| ||||||||||    
T  19091 cactttccaaccccctaacttttaccccttttgcaaatcataggtcccctctgattttgacccggtcaaagg 19162  T

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Target: scaffold0210; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 115 - 186
Target Start/End: Original strand, 26983 - 27054
Alignment:
Q  115 cactttccaaccccctaatttcacccccttttgcaactcacaagccccctctaattttgactcggtcaaagg 186  Q
    |||||||||||||||||| ||   |||||||||||| ||| | | ||||||| |||||||| ||||||||||    
T  26983 cactttccaaccccctaacttttaccccttttgcaaatcataggtcccctctgattttgacccggtcaaagg 27054  T

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Target: scaffold0005 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 47 - 103
Target Start/End: Complemental strand, 205241 - 205185
Alignment:
Q  47 ggctaaaatgcacttttggccctctatgtttggctccgtatcaattttggcccccta 103  Q
    |||| |||||||||||||| |||||||||||| |  |||| |||||||| |||||||    
T  205241 ggcttaaatgcacttttggtcctctatgtttgtcgtcgtagcaattttgacccccta 205185  T

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