View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15317_low_28 (Length: 312)
Name: NF15317_low_28
Description: NF15317
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15317_low_28 |
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Alignment Details
Target: chr8 (Bit Score: 181; Significance: 8e-98; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 45 - 289
Target Start/End: Original strand, 32429885 - 32430129
Alignment:
| Q |
45 |
ttctctctccaatccactatgaaatgatgaggttgccaataattataccctagagttcacaaagtacaataatatatttttacctatttttcaagtcacc |
144 |
Q |
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| T |
32429885 |
ttctctctccaatccactgtgacatgatgaggttgctaataattataccctagagttcacaaagtacaataatatatttttacctatttttcaagtcacc |
32429984 |
T |
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| Q |
145 |
catatccacagtagatcctaagnnnnnnnnnnnngagaagactttgctcatccatctaatgagatctcaactacccaatgtgtatgaaaaatattttcca |
244 |
Q |
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|||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
32429985 |
catacccacaatagatcctaagaaaaaacaaaaagagaagactttgctcatccatctaatgagatctcaactacccaatgtgcatgaaaaatattttcca |
32430084 |
T |
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| Q |
245 |
acccaagaatctaatgcaaaaatactcgacccttagcaaacaatt |
289 |
Q |
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||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
32430085 |
acccaagaatctaatgcaaaaatactcaacccttagcaaacaatt |
32430129 |
T |
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