View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15318_high_11 (Length: 299)
Name: NF15318_high_11
Description: NF15318
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15318_high_11 |
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Alignment Details
Target: chr5 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 13 - 283
Target Start/End: Original strand, 40606050 - 40606322
Alignment:
| Q |
13 |
aaggccaagtcaaatcactaaaggcagtagcaggatcatcaagagcaaaccaaagaagagccttgagaaacttccaactaaggtagtctatgcaaaaatt |
112 |
Q |
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| T |
40606050 |
aaggccaagtcaaatcactaaagccagtagcaggatcatcaagagcaaaccaaagaagagccttgagaaacttccaactaaggtagtctatgcaaaaatt |
40606149 |
T |
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| Q |
113 |
gtcttctctgattgaaagaataaggcaaccttgagaagaaagatctttagtatcacgaattacaaacac--agatgaaaactcaaatcgcttgagaggat |
210 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |
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| T |
40606150 |
gtcttctctgattgaaagaataaggcaaccttgagaagaaagatctttagtatcacgaattacaaacacatagatgaaaactcaaatcacttgagaggat |
40606249 |
T |
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| Q |
211 |
caaggctaggacaaagagacaatatgagtaaagatcacacctctataaccaagagaccaagtaatatacaatc |
283 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40606250 |
caaggctaggacaaagagacaatatgagtaaagatcacacctctataaccaagagaccaagtaatatacaatc |
40606322 |
T |
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