View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15318_low_22 (Length: 270)
Name: NF15318_low_22
Description: NF15318
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15318_low_22 |
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Alignment Details
Target: chr5 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 1154171 - 1153920
Alignment:
| Q |
1 |
tcttcttcttacattttcctgatttctggattatcacttaattgtgttcaatttgctagtaacaagtaattaattatttggtactgttttgtgcagcttg |
100 |
Q |
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| T |
1154171 |
tcttcttcttacattttcctgatttctggattatcacttaattgtgttcaatttgctagtaacaagtaattaattatctggtactgttttgtgcagcttg |
1154072 |
T |
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| Q |
101 |
gtattgtgctgggaaaggctaagagtggtgaccagagtaccgatgcttcctcagagtagtggaactgacaggagatgatgaaactctactgcttgtagag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1154071 |
gtattgtgctgggaaaggctaagagtggtgaccagagtactgatgcttcctcagagtagtggaactgacaggagatgatgaaactctactgcttgtagag |
1153972 |
T |
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| Q |
201 |
tactgtgtgtaataaactgaatttgtggtgtagaatgtagatagatatatgt |
252 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1153971 |
tactgtgtgtaataaactgaatttgtggtgtagaatgtagatagatatatgt |
1153920 |
T |
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