View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15318_low_9 (Length: 499)
Name: NF15318_low_9
Description: NF15318
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15318_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 431; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 431; E-Value: 0
Query Start/End: Original strand, 19 - 492
Target Start/End: Complemental strand, 44426575 - 44426101
Alignment:
| Q |
19 |
aatgttaataccttttggagctaaatctacctatatcagtagcagaaatcttagattatttgggagaatgcatatttgtaaagatttgacaatgtaggga |
118 |
Q |
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| T |
44426575 |
aatgttaaaaccttttggagctaaatctacctatatcagtagcagaaatcttagattatttgggagaatgcatgtttgtaaagatttgacaatgtaggaa |
44426476 |
T |
|
| Q |
119 |
gatgaccccaatataa-tatctagggtcttgaaagataattaagatataagatacaggaatataagtatataattgcttaaatcgggtacattctgcttt |
217 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
44426475 |
gatgaccccaatataaatatctagggtcttgaaagataattaagatataagatacaagaatataagtatataattgcttaaaccgggtacattctgcttt |
44426376 |
T |
|
| Q |
218 |
ccaaggagaaggttttatgattaattaagtagttatttcagtttgaatataggaaatcatgtttggatgttgctcatcgctcaatgggttggcaggatca |
317 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44426375 |
ccaaggagaaggttttatgattaattaagtagttatttcagtttgaatataggaaatcatgtttggatgttgctcatcgctcaatgggttggcaggatca |
44426276 |
T |
|
| Q |
318 |
cgacctgattagtggtatttagtatttactgacatgattcaccatagtttgaactagcttggctttgttattactaggaggatatgcatgaagtgtaaca |
417 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44426275 |
cgacctgattagtggtatttagtatttactgacatgattcaccatagtttgaactggcttggctttgttattactaggaggatatgcatgaagtgtaaca |
44426176 |
T |
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| Q |
418 |
acgatatccttgatgtcatctaaaattgatcttgaaagtcagcacacaacgatctttcttaggtttcctatgctt |
492 |
Q |
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|||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44426175 |
acgatatccttggcgtcacctaaaattgatcttgaaagtcagcacacaacgatctttcttaggtttcctatgctt |
44426101 |
T |
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