View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1531_1D_high_8 (Length: 468)
Name: NF1531_1D_high_8
Description: NF1531_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1531_1D_high_8 |
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Alignment Details
Target: chr7 (Bit Score: 417; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 417; E-Value: 0
Query Start/End: Original strand, 17 - 445
Target Start/End: Original strand, 48022375 - 48022803
Alignment:
| Q |
17 |
catcagaaatataaccaggaattatggaaatacagttgcagagaaggcctcccgattgactaatgaacacaaatacattacagaaaaaatacatattacc |
116 |
Q |
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| T |
48022375 |
catcagaaatataaccagcaattatggaaatacagttgcagagaaggcctcccgattgactaatgaacacaaatacattacagaaaaaatacatattacc |
48022474 |
T |
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| Q |
117 |
accaaaattgaattggtattaaaaacaatatagttacagacaatttgccacataatttacaattatattgacacaatcaaatacccaggccgaaaaaatt |
216 |
Q |
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| T |
48022475 |
accaaaattgaattggtattaaaaacaatatagttacagacaatttgccacataatttacaattatattgacacaatcaaatacccaggccgaaaaaatt |
48022574 |
T |
|
| Q |
217 |
gggtaaaagcctcacattgcgtatacctatctatatcttttactctaatgtggtgccattacacattttggttgtcgatggatattctgtatcccaccct |
316 |
Q |
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| T |
48022575 |
gggtaaaagcctcacattgcgtatacctatctatatcttttactctaatgtggtgccattacacattttggttatcgatggatattctgtatcccaccct |
48022674 |
T |
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| Q |
317 |
tttaatgtgaaatgaaaagcaaacatcttagctagttgacatatcttcgtcactgtctccactgtcatcactgcattgcaggaaatataaccacgggaga |
416 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
48022675 |
tttaatgtgaaatgaaaagcaaacatcttagctagttgacatatcttcgtcactgtctccactgtcatcactgcattgcaggaaatataaccacgagaga |
48022774 |
T |
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| Q |
417 |
aattcattaataatttcagatatcgaaca |
445 |
Q |
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| T |
48022775 |
aattcattaataatttcagatatcgaaca |
48022803 |
T |
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