View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1531_1D_low_20 (Length: 334)
Name: NF1531_1D_low_20
Description: NF1531_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1531_1D_low_20 |
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Alignment Details
Target: chr4 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 256 - 314
Target Start/End: Complemental strand, 9546158 - 9546100
Alignment:
| Q |
256 |
gagtcacaagaaaaataaacaagttgcagaaagtggtggtgattattcaatttcacaac |
314 |
Q |
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| T |
9546158 |
gagtcacaagaaaaataaacaagttgcagaaagtggtggtgattattcaatttcacaac |
9546100 |
T |
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