View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1531_1D_low_30 (Length: 278)
Name: NF1531_1D_low_30
Description: NF1531_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1531_1D_low_30 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 24 - 278
Target Start/End: Original strand, 48021896 - 48022150
Alignment:
| Q |
24 |
gagttaaataggaacaattccataataataacttaccttatttagagtaaaaggccttttaattgaatgaaatttgcattatcgtcagatataaataaat |
123 |
Q |
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| T |
48021896 |
gagttaaataggaacaattcaataataataacttatcttatttagagtaaaaggccttttaatagaatgaaatttgcattttcgtcagatataaataaat |
48021995 |
T |
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| Q |
124 |
aatccctttgtcccttattataagcatccttaatgctttccatatatatttagaatgttagtgaatttaatgtgctaaatgttatatggtgatcttccac |
223 |
Q |
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| T |
48021996 |
aatccctttgtcccttattataagcatccttaatgctttccatatatatttagaatgttagtgaatttaatgggttaaatgttatatggtgatcttccac |
48022095 |
T |
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| Q |
224 |
aaataccttttgcattttagtttaactttagtttttcaaattccaagataaaata |
278 |
Q |
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| T |
48022096 |
aaataccttttgcattttagttaaactttagtttttcaaattccaagataaaata |
48022150 |
T |
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