View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1531_1D_low_39 (Length: 250)

Name: NF1531_1D_low_39
Description: NF1531_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1531_1D_low_39
NF1531_1D_low_39
[»] chr7 (41 HSPs)
chr7 (1-163)||(9355929-9356096)
chr7 (10-81)||(24211718-24211790)
chr7 (11-81)||(26524440-26524511)
chr7 (1-81)||(5657584-5657665)
chr7 (10-81)||(32821165-32821237)
chr7 (10-81)||(48928675-48928747)
chr7 (1-81)||(17842689-17842770)
chr7 (10-70)||(22687227-22687288)
chr7 (20-84)||(25691667-25691732)
chr7 (1-81)||(31579172-31579253)
chr7 (1-81)||(37109849-37109930)
chr7 (18-85)||(23111163-23111231)
chr7 (10-81)||(31520835-31520907)
chr7 (10-81)||(43686018-43686090)
chr7 (1-81)||(18797306-18797385)
chr7 (10-83)||(27421491-27421565)
chr7 (10-67)||(48928408-48928466)
chr7 (1-81)||(27283721-27283802)
chr7 (1-83)||(44413482-44413566)
chr7 (10-81)||(12390742-12390814)
chr7 (36-82)||(3953732-3953779)
chr7 (1-81)||(30055503-30055585)
chr7 (18-83)||(8299190-8299256)
chr7 (20-81)||(8861262-8861324)
chr7 (20-81)||(21991613-21991675)
chr7 (1-81)||(4582896-4582977)
chr7 (1-81)||(7334771-7334852)
chr7 (21-81)||(15612881-15612942)
chr7 (10-81)||(38258522-38258594)
chr7 (20-81)||(6546496-6546558)
chr7 (20-81)||(33688384-33688445)
chr7 (48-85)||(19786278-19786315)
chr7 (1-81)||(37346999-37347080)
chr7 (10-81)||(41765190-41765262)
chr7 (36-81)||(23402371-23402417)
chr7 (1-81)||(12165729-12165810)
chr7 (1-81)||(34362251-34362332)
chr7 (1-81)||(37704145-37704226)
chr7 (10-51)||(38053494-38053535)
chr7 (10-81)||(10359326-10359398)
chr7 (30-81)||(32432434-32432486)
[»] chr8 (37 HSPs)
chr8 (10-81)||(43643712-43643784)
chr8 (1-77)||(37970627-37970704)
chr8 (18-83)||(7891073-7891139)
chr8 (10-81)||(1150222-1150294)
chr8 (10-69)||(1204940-1205000)
chr8 (10-81)||(10555319-10555391)
chr8 (10-81)||(13307624-13307696)
chr8 (19-81)||(15009243-15009306)
chr8 (1-81)||(16446983-16447064)
chr8 (1-81)||(27082946-27083027)
chr8 (1-81)||(38643979-38644060)
chr8 (10-69)||(23854548-23854608)
chr8 (10-81)||(34894968-34895040)
chr8 (10-87)||(16222858-16222936)
chr8 (1-81)||(6098626-6098707)
chr8 (1-81)||(36695074-36695155)
chr8 (1-84)||(465840-465924)
chr8 (10-81)||(8803927-8803995)
chr8 (20-81)||(5300073-5300135)
chr8 (20-93)||(24823399-24823473)
chr8 (1-81)||(9864149-9864230)
chr8 (1-81)||(30654691-30654772)
chr8 (20-69)||(11727037-11727087)
chr8 (10-81)||(12876110-12876182)
chr8 (10-81)||(33906225-33906297)
chr8 (18-81)||(35459823-35459887)
chr8 (36-83)||(35735984-35736032)
chr8 (19-81)||(40862420-40862483)
chr8 (31-81)||(41362519-41362570)
chr8 (36-81)||(28220955-28221001)
chr8 (39-83)||(6446709-6446754)
chr8 (48-81)||(7998364-7998397)
chr8 (1-69)||(31933994-31934063)
chr8 (48-81)||(39099265-39099298)
chr8 (1-81)||(41911097-41911177)
chr8 (36-83)||(23176763-23176811)
chr8 (10-81)||(34952148-34952220)
[»] chr4 (51 HSPs)
chr4 (10-81)||(25184115-25184187)
chr4 (10-87)||(32912717-32912795)
chr4 (10-81)||(35021172-35021244)
chr4 (15-90)||(55478037-55478113)
chr4 (1-87)||(34361619-34361706)
chr4 (10-83)||(47253749-47253823)
chr4 (11-81)||(38011856-38011927)
chr4 (20-81)||(7703519-7703581)
chr4 (13-81)||(28003126-28003195)
chr4 (1-81)||(34948225-34948306)
chr4 (1-81)||(39397920-39398001)
chr4 (15-81)||(19440790-19440858)
chr4 (1-83)||(36493816-36493899)
chr4 (1-81)||(37287735-37287817)
chr4 (10-83)||(5048102-5048176)
chr4 (20-81)||(17272013-17272075)
chr4 (20-85)||(27396614-27396680)
chr4 (20-81)||(29584345-29584407)
chr4 (26-83)||(52516597-52516655)
chr4 (21-81)||(4597995-4598056)
chr4 (1-81)||(42199731-42199812)
chr4 (1-81)||(53124289-53124370)
chr4 (10-81)||(25701194-25701266)
chr4 (10-81)||(35025725-35025797)
chr4 (1-87)||(4396322-4396409)
chr4 (18-80)||(6864038-6864101)
chr4 (1-81)||(49375968-49376050)
chr4 (16-81)||(4205118-4205184)
chr4 (1-81)||(3042613-3042694)
chr4 (1-81)||(19089581-19089662)
chr4 (30-82)||(20097485-20097538)
chr4 (10-69)||(879685-879745)
chr4 (10-81)||(7152243-7152315)
chr4 (20-83)||(33341395-33341459)
chr4 (1-83)||(17173290-17173373)
chr4 (36-81)||(38812260-38812306)
chr4 (20-81)||(55241251-55241313)
chr4 (1-81)||(17167715-17167796)
chr4 (1-69)||(46888285-46888354)
chr4 (10-81)||(32579446-32579518)
chr4 (35-81)||(28293236-28293283)
chr4 (10-84)||(33816670-33816745)
chr4 (31-81)||(37663897-37663948)
chr4 (36-81)||(38811815-38811861)
chr4 (1-58)||(54499367-54499425)
chr4 (36-81)||(54995799-54995845)
chr4 (10-66)||(23761089-23761146)
chr4 (1-81)||(37775671-37775752)
chr4 (18-81)||(9139249-9139313)
chr4 (10-81)||(30002761-30002833)
chr4 (30-81)||(51204581-51204633)
[»] chr2 (34 HSPs)
chr2 (1-83)||(43770959-43771041)
chr2 (1-81)||(33551106-33551187)
chr2 (13-81)||(17054228-17054297)
chr2 (13-81)||(17071869-17071938)
chr2 (10-81)||(41465511-41465583)
chr2 (1-81)||(33902070-33902149)
chr2 (1-81)||(19424748-19424829)
chr2 (1-81)||(35958911-35958992)
chr2 (10-81)||(11366510-11366582)
chr2 (10-81)||(26357579-26357651)
chr2 (10-84)||(41463979-41464054)
chr2 (20-85)||(36641984-36642050)
chr2 (15-81)||(37905711-37905777)
chr2 (1-81)||(13711466-13711547)
chr2 (1-81)||(18494388-18494469)
chr2 (10-81)||(19313854-19313926)
chr2 (10-83)||(33660497-33660571)
chr2 (10-52)||(43648374-43648416)
chr2 (1-81)||(2325490-2325571)
chr2 (10-81)||(4264206-4264278)
chr2 (20-86)||(31570873-31570940)
chr2 (10-81)||(44913664-44913735)
chr2 (1-81)||(4763630-4763714)
chr2 (12-81)||(29242269-29242339)
chr2 (20-81)||(41960885-41960947)
chr2 (16-84)||(3176938-3177007)
chr2 (1-81)||(4166924-4167005)
chr2 (10-51)||(4478402-4478443)
chr2 (10-51)||(27350067-27350108)
chr2 (36-84)||(41643871-41643920)
chr2 (37-81)||(43446463-43446508)
chr2 (1-91)||(19289443-19289529)
chr2 (36-81)||(31861897-31861943)
chr2 (5-82)||(44285950-44286028)
[»] chr1 (48 HSPs)
chr1 (10-83)||(15752025-15752099)
chr1 (10-81)||(1547285-1547357)
chr1 (10-86)||(16415638-16415715)
chr1 (13-81)||(2959746-2959815)
chr1 (10-81)||(3309146-3309218)
chr1 (10-69)||(14758051-14758111)
chr1 (18-81)||(18422649-18422713)
chr1 (18-81)||(37619010-37619074)
chr1 (15-81)||(19899880-19899947)
chr1 (10-92)||(28769640-28769723)
chr1 (15-81)||(30254856-30254923)
chr1 (4-81)||(30254422-30254500)
chr1 (20-81)||(38823212-38823274)
chr1 (1-81)||(10922725-10922806)
chr1 (1-81)||(32267032-32267113)
chr1 (1-83)||(46931404-46931490)
chr1 (10-81)||(8222129-8222201)
chr1 (10-81)||(15382931-15383003)
chr1 (2-81)||(30327050-30327130)
chr1 (10-81)||(34012483-34012555)
chr1 (5-84)||(41926158-41926238)
chr1 (20-78)||(27533096-27533155)
chr1 (10-85)||(27763416-27763491)
chr1 (12-81)||(10182116-10182186)
chr1 (1-81)||(7079171-7079252)
chr1 (21-81)||(31621670-31621731)
chr1 (10-47)||(32216088-32216125)
chr1 (10-81)||(3534930-3535002)
chr1 (1-64)||(9903151-9903215)
chr1 (31-81)||(27227604-27227655)
chr1 (15-69)||(37451296-37451351)
chr1 (20-81)||(22170752-22170814)
chr1 (4-81)||(39393381-39393459)
chr1 (29-69)||(21289675-21289716)
chr1 (10-51)||(28564887-28564928)
chr1 (1-81)||(42721037-42721118)
chr1 (1-81)||(48620635-48620716)
chr1 (10-85)||(238618-238694)
chr1 (18-81)||(23999345-23999409)
chr1 (31-81)||(47682620-47682671)
chr1 (47-81)||(421390-421424)
chr1 (20-69)||(11742466-11742516)
chr1 (10-83)||(33725706-33725780)
chr1 (36-81)||(43579244-43579290)
chr1 (10-69)||(27267305-27267363)
chr1 (1-69)||(47279199-47279268)
chr1 (10-51)||(51128888-51128929)
chr1 (10-83)||(27564011-27564086)
[»] chr3 (44 HSPs)
chr3 (1-81)||(51213083-51213164)
chr3 (10-81)||(40552370-40552442)
chr3 (10-81)||(46297873-46297945)
chr3 (10-81)||(35844319-35844391)
chr3 (10-69)||(44891512-44891571)
chr3 (1-87)||(48354928-48355015)
chr3 (1-81)||(37157701-37157782)
chr3 (10-81)||(4015453-4015525)
chr3 (10-81)||(22450961-22451033)
chr3 (10-69)||(52041034-52041094)
chr3 (20-81)||(27480500-27480562)
chr3 (1-69)||(29099360-29099429)
chr3 (1-81)||(37203060-37203141)
chr3 (10-86)||(43975999-43976073)
chr3 (1-81)||(44186603-44186684)
chr3 (1-81)||(47481515-47481596)
chr3 (1-81)||(54505801-54505882)
chr3 (1-68)||(11357467-11357535)
chr3 (10-87)||(4761760-4761840)
chr3 (1-80)||(22446166-22446247)
chr3 (20-81)||(26941381-26941443)
chr3 (1-81)||(33698185-33698262)
chr3 (10-81)||(7327593-7327666)
chr3 (1-81)||(34132928-34133009)
chr3 (30-81)||(11835737-11835789)
chr3 (2-85)||(53229256-53229340)
chr3 (18-81)||(55343403-55343467)
chr3 (15-69)||(20373412-20373467)
chr3 (10-80)||(32373466-32373537)
chr3 (24-81)||(11466817-11466875)
chr3 (32-81)||(21193599-21193649)
chr3 (36-81)||(40640634-40640680)
chr3 (20-69)||(40935996-40936046)
chr3 (20-81)||(45174496-45174558)
chr3 (1-81)||(3655304-3655385)
chr3 (1-81)||(39282646-39282726)
chr3 (36-81)||(45879498-45879544)
chr3 (20-81)||(46994771-46994833)
chr3 (10-70)||(2613894-2613955)
chr3 (10-51)||(3362277-3362318)
chr3 (1-81)||(33378887-33378965)
chr3 (36-80)||(38392628-38392673)
chr3 (36-84)||(53818509-53818558)
chr3 (1-85)||(54828803-54828887)
[»] chr5 (48 HSPs)
chr5 (10-81)||(14409427-14409499)
chr5 (18-81)||(26317793-26317857)
chr5 (1-81)||(8741979-8742060)
chr5 (11-81)||(8466747-8466818)
chr5 (12-81)||(12910352-12910422)
chr5 (20-81)||(15724492-15724554)
chr5 (5-81)||(16004472-16004550)
chr5 (20-81)||(19119861-19119923)
chr5 (11-84)||(25501028-25501102)
chr5 (10-87)||(35826584-35826662)
chr5 (1-81)||(1429237-1429318)
chr5 (1-89)||(5112405-5112494)
chr5 (1-81)||(22980795-22980876)
chr5 (10-81)||(7693232-7693304)
chr5 (10-81)||(22974183-22974255)
chr5 (15-81)||(31705717-31705784)
chr5 (10-83)||(27318588-27318662)
chr5 (20-81)||(27330308-27330370)
chr5 (8-81)||(31786745-31786819)
chr5 (1-81)||(24886104-24886187)
chr5 (1-81)||(30969416-30969497)
chr5 (10-81)||(13956446-13956518)
chr5 (1-83)||(699150-699233)
chr5 (1-83)||(5837555-5837638)
chr5 (1-86)||(38528328-38528414)
chr5 (1-81)||(9200235-9200316)
chr5 (1-81)||(36866764-36866845)
chr5 (1-81)||(40133387-40133468)
chr5 (10-81)||(23116323-23116395)
chr5 (10-81)||(32563151-32563223)
chr5 (10-69)||(33908247-33908307)
chr5 (10-81)||(39572821-39572893)
chr5 (1-52)||(22255607-22255658)
chr5 (20-82)||(26268075-26268138)
chr5 (10-81)||(14919629-14919702)
chr5 (15-74)||(43308757-43308818)
chr5 (1-81)||(36860425-36860506)
chr5 (10-81)||(35511578-35511650)
chr5 (10-81)||(35933904-35933976)
chr5 (10-81)||(17158131-17158206)
chr5 (36-81)||(22616496-22616542)
chr5 (34-74)||(5748437-5748478)
chr5 (1-77)||(22019638-22019715)
chr5 (1-42)||(42342775-42342816)
chr5 (17-82)||(7208971-7209038)
chr5 (10-69)||(8436980-8437040)
chr5 (19-51)||(22255214-22255246)
chr5 (20-81)||(28416638-28416695)
[»] chr6 (17 HSPs)
chr6 (20-81)||(4318943-4319005)
chr6 (1-81)||(8513235-8513316)
chr6 (10-81)||(20768088-20768160)
chr6 (20-83)||(30353478-30353542)
chr6 (1-81)||(1945835-1945917)
chr6 (1-85)||(29182161-29182246)
chr6 (10-81)||(7235144-7235216)
chr6 (10-83)||(6088908-6088982)
chr6 (1-81)||(5627393-5627474)
chr6 (1-69)||(18498447-18498516)
chr6 (10-81)||(3880049-3880121)
chr6 (18-81)||(7055333-7055397)
chr6 (36-89)||(19631743-19631797)
chr6 (1-81)||(33893103-33893184)
chr6 (47-81)||(3005405-3005439)
chr6 (1-93)||(21017213-21017306)
chr6 (47-84)||(30338475-30338512)
[»] scaffold0009 (2 HSPs)
scaffold0009 (11-91)||(100813-100894)
scaffold0009 (1-81)||(42350-42431)
[»] scaffold0291 (1 HSPs)
scaffold0291 (1-85)||(7885-7970)
[»] scaffold0061 (1 HSPs)
scaffold0061 (1-83)||(43957-44040)
[»] scaffold0017 (1 HSPs)
scaffold0017 (1-83)||(154747-154830)
[»] scaffold0318 (1 HSPs)
scaffold0318 (1-83)||(11906-11990)
[»] scaffold0262 (1 HSPs)
scaffold0262 (35-81)||(12137-12184)
[»] scaffold0022 (1 HSPs)
scaffold0022 (1-83)||(146118-146201)
[»] scaffold0002 (2 HSPs)
scaffold0002 (10-81)||(136-208)
scaffold0002 (1-62)||(94485-94547)
[»] scaffold0312 (1 HSPs)
scaffold0312 (47-81)||(9147-9181)


Alignment Details
Target: chr7 (Bit Score: 107; Significance: 1e-53; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 9355929 - 9356096
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcaccaaaaag-tcattctcatgacttcatcatagaatttttcttgtatttatcagcgg 99  Q
    ||||||||||||||||||||||| ||| ||||||||||| |||||||||| | ||||||||||||||||| |||| |||||| ||||||||||| |||||    
T  9355929 ggggtattgctcactacattttttatgctatagtgttaaattcaccaaaatggtcattctcatgacttcaccataaaattttccttgtatttattagcgg 9356028  T
Q  100 cactgatgttttgtatttttaagttatc----aaatattaatggtttgattgtattgtctaatcttgg 163  Q
    ||||||||||||||||||||||||||||    |||||||||||||||||||||||||||| |||||||    
T  9356029 cactgatgttttgtatttttaagttatcaaataaatattaatggtttgattgtattgtctcatcttgg 9356096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 24211790 - 24211718
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||    
T  24211790 ctcattacatttttgatgttatagtgttaacttcaccaaaaaagtcattcttatgacttcaccatagaatttt 24211718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 11 - 81
Target Start/End: Original strand, 26524440 - 26524511
Alignment:
Q  11 tcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    |||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||||| |||||||||||    
T  26524440 tcacaacatttttgatgttatagtgttaacatcaccagaaaagtcattctcatgacttcaccatagaatttt 26524511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 5657584 - 5657665
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| || ||||| ||| |||||||||||||||||||||||||| | |||||||||||||||||||||| |||||||||||    
T  5657584 ggggtgttactcacaacacttttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcaccatagaatttt 5657665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 10 - 81
Target Start/End: Original strand, 32821165 - 32821237
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacc-aaaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||||||||||||||||||||| ||||||||||||| ||||| ||||| ||||||||||| |||||||||||    
T  32821165 ctcactacatttttgatgttatattgttaacttcaccaaaaaaatcattttcatgacttcaccatagaatttt 32821237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 10 - 81
Target Start/End: Original strand, 48928675 - 48928747
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||| |||| ||||||    
T  48928675 ctcactacacttttgatgttatagtgttgacttcaccagaaaagtcattctcatgacttcaccataaaatttt 48928747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 17842689 - 17842770
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacc-aaaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| || |||| ||||||||| |||||||||||||||||||||| ||||||||||| | ||||||||| |||||||||||    
T  17842689 ggggtgttactcattacattttttatgttatagtgttaacttcaccaaaaaagtcatttttatgacttcaccatagaatttt 17842770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 22687288 - 22687227
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcat 70  Q
    ||||| ||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  22687288 ctcacaacatttttgatgttatagtgttaacttcatcagaaaagtcattctcatgacttcat 22687227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 25691667 - 25691732
Alignment:
Q  20 ttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttttct 84  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||||| |||| |||||||||    
T  25691667 ttttgatgttatagtgttaacttcacgagaaaagtcattctcatgacttcaccataaaatttttct 25691732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 31579172 - 31579253
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacc-aaaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| || |||| |||||||||||||||||||||||||||||||| ||||| | ||||| ||||||||| |||||||||||    
T  31579172 ggggtgttactcattacatttttgatgttatagtgttaacttcaccaaaaaaattattcttatgacttcaccatagaatttt 31579253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 37109930 - 37109849
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| || |||| ||||||||| ||||||||||||||||||||||| |||||||||| | ||||||||| |||||||||||    
T  37109930 ggggtgttactcattacattttttatgttatagtgttaacttcaccaaaaaagtcatttttatgacttcaccatagaatttt 37109849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 23111231 - 23111163
Alignment:
Q  18 atttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttttctt 85  Q
    |||||||||||||||||||||||||||||| |||| ||||| ||||||||||| || ||||||||||||    
T  23111231 atttttgatgttatagtgttaacttcaccagaaaaatcattttcatgacttcaccacagaatttttctt 23111163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 10 - 81
Target Start/End: Original strand, 31520835 - 31520907
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacc-aaaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||||| |||||||||| |||||| ||||||||||| ||||||||||| |||||||||||||||| ||||||    
T  31520835 ctcactatatttttgatggtatagtattaacttcaccaaaaaagtcattttcatgacttcatcataaaatttt 31520907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 43686090 - 43686018
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttca-ccaaaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| ||||||||||| ||||||||||||||||| ||||||||||||| || |||||||| |||||||||||    
T  43686090 ctcacaacatttttgatattatagtgttaacttcacccaaaaagtcattttcgtgacttcaccatagaatttt 43686018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 18797385 - 18797306
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcaccaaaaa-gtcattctcatgacttcatcatagaatttt 81  Q
    ||||| || |||| ||||||||| ||||||  ||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  18797385 ggggtgttactcattacattttttatgtta--gtgttaacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 18797306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 83
Target Start/End: Original strand, 27421491 - 27421565
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacc-aaaaagtcattctcatgacttcatcatagaatttttc 83  Q
    ||||| ||| ||||||||||||||||||||||||||| ||||| ||||| ||| ||||||| |||||||||||||    
T  27421491 ctcacaacacttttgatgttatagtgttaacttcaccaaaaaaatcattatcacgacttcaccatagaatttttc 27421565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 67
Target Start/End: Original strand, 48928408 - 48928466
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgactt 67  Q
    ||||||||| |||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  48928408 ctcactacacttttgatgttatagtgttgacttcaccagaaaagtcattctcatgactt 48928466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 27283802 - 27283721
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| || |||| ||||||||||||||||||||||||||||||||| |||| ||||| | || |||||| |||||||||||    
T  27283802 ggggtgttactcattacatttttgatgttatagtgttaacttcaccaaaaaaatcatttttataacttcaccatagaatttt 27283721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 44413482 - 44413566
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttca--ccaaaaagtcattctcatgacttcatcatagaatttttc 83  Q
    ||||| || ||||||| |||||||||||||||||||||||||||    ||||||||||| ||||||||| | |||||||||||||    
T  44413482 ggggtgttactcactatatttttgatgttatagtgttaacttcattaaaaaaagtcattttcatgactttaccatagaatttttc 44413566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 81
Target Start/End: Original strand, 12390742 - 12390814
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacc-aaaaagtcattctcatgacttcatcatagaatttt 81  Q
    |||| |||| ||||||||||||||||||||||||||| ||||||||  ||| ||||||||| |||||||||||    
T  12390742 ctcattacacttttgatgttatagtgttaacttcaccaaaaaagtcgatctgatgacttcaccatagaatttt 12390814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 36 - 82
Target Start/End: Complemental strand, 3953779 - 3953732
Alignment:
Q  36 ttaacttcacca-aaaagtcattctcatgacttcatcatagaattttt 82  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||    
T  3953779 ttaacttcaccagaaaagtcattctcatgacttcatcatagaattttt 3953732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 30055585 - 30055503
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcaccaaaaa--gtcattctcatgacttcatcatagaatttt 81  Q
    ||||| || |||| |||| ||||||| ||||||||||||||||| ||||||  |||||||| ||||||||| |||||||||||    
T  30055585 ggggtgttactcattacaattttgatattatagtgttaacttcatcaaaaaaagtcattcttatgacttcaccatagaatttt 30055503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 8299256 - 8299190
Alignment:
Q  18 atttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttttc 83  Q
    |||||||||  ||||||||||||||||||| |||||||||| || |||||||| |||||||||||||    
T  8299256 atttttgatactatagtgttaacttcaccagaaaagtcattttcgtgacttcaccatagaatttttc 8299190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 8861324 - 8861262
Alignment:
Q  20 ttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    |||||||| ||||||||||||||| | | |||||||||||||||||||||| |||||||||||    
T  8861324 ttttgatgctatagtgttaacttcgcgagaaaagtcattctcatgacttcaccatagaatttt 8861262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 21991675 - 21991613
Alignment:
Q  20 ttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    |||||||| ||||||||||||||||||| |||| ||||||||||||||||| | |||||||||    
T  21991675 ttttgatgctatagtgttaacttcaccataaaaatcattctcatgacttcaccctagaatttt 21991613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 4582977 - 4582896
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| || ||||| |||||||||||  |||||| |||||||||||| |||||||||| || |||||||| |||||||||||    
T  4582977 ggggtgttactcacaacatttttgatactatagtattaacttcaccagaaaagtcattttcgtgacttcaccatagaatttt 4582896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 7334852 - 7334771
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttca-ccaaaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| || |||| ||||| ||| |||||||||||||||||||| | ||||||||||||||| ||||||| | |||||||||    
T  7334852 ggggtgttactcattacatattttatgttatagtgttaacttcatcaaaaaagtcattctcacgacttcaccgtagaatttt 7334771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 81
Target Start/End: Original strand, 15612881 - 15612942
Alignment:
Q  21 tttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||||||||||||||||||||||| | ||| || ||||||||||||||| |||||||||||    
T  15612881 tttgatgttatagtgttaacttcacaagaaacgttattctcatgacttcaccatagaatttt 15612942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 38258594 - 38258522
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    |||| ||||||||| ||||||||||||||||||||||| |||| ||||| | ||||||||| | |||||||||    
T  38258594 ctcattacattttttatgttatagtgttaacttcaccaaaaaaatcatttttatgacttcaccgtagaatttt 38258522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 6546558 - 6546496
Alignment:
Q  20 ttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    |||||||| ||||||||||||||||| | |||| ||||||| ||||||||| |||||||||||    
T  6546558 ttttgatgctatagtgttaacttcactagaaaaatcattcttatgacttcaccatagaatttt 6546496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 33688384 - 33688445
Alignment:
Q  20 ttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||||||||||||||||||||| |||| ||||||||||||||| |||||| |||| ||||||    
T  33688384 ttttgatgttatagtgttaactt-accagaaaagtcattctcataacttcaccatataatttt 33688445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 85
Target Start/End: Complemental strand, 19786315 - 19786278
Alignment:
Q  48 aaaagtcattctcatgacttcatcatagaatttttctt 85  Q
    |||||||||||||||||||||||| |||||||||||||    
T  19786315 aaaagtcattctcatgacttcatcgtagaatttttctt 19786278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 37347080 - 37346999
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| || |||| || |||||||||| |||||| |||||||||||| |||| ||||| ||||||||||| |||| ||||||    
T  37347080 ggggtgttactcattatatttttgatggtatagtattaacttcaccaaaaaaatcattttcatgacttcaccataaaatttt 37346999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 81
Target Start/End: Original strand, 41765190 - 41765262
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||||||| |||||||| |||||| || |||| | || |||||||||||||||||||||| ||| |||||||    
T  41765190 ctcactacacttttgatgctatagtattgactttatcagaaaagtcattctcatgacttcaccatggaatttt 41765262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 23402371 - 23402417
Alignment:
Q  36 ttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    |||||||||||| |||||||||||||||||||||  |||||||||||    
T  23402371 ttaacttcaccagaaaagtcattctcatgacttcgccatagaatttt 23402417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 12165810 - 12165729
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| || ||||| ||| ||| |||| ||||||||||||||||||| |||||||||| | | ||||||| | |||||||||    
T  12165810 ggggtgttactcacaacactttggatgctatagtgttaacttcaccagaaaagtcattttaacgacttcaccgtagaatttt 12165729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 34362251 - 34362332
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| || ||||| ||| |||||||| ||||||||||||||  | | ||||||||||||||| | |||| |||||||||||    
T  34362251 ggggtgttactcacaacacttttgatgctatagtgttaactttcctagaaaagtcattctcataatttcaccatagaatttt 34362332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 37704226 - 37704145
Alignment:
Q  1 ggggtattgctcactacatttttg-atgttatagtgttaacttcaccaaaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| || ||||||||||||||  ||| ||||||||||||||||  ||||| ||||| | || | ||||||||||||||||    
T  37704226 ggggtgttactcactacatttttttatgctatagtgttaacttcataaaaaaatcatttttataatttcatcatagaatttt 37704145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 38053535 - 38053494
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcaccaaaaa 51  Q
    |||| ||||||||| |||||||||| ||||||||||||||||    
T  38053535 ctcattacattttttatgttatagtattaacttcaccaaaaa 38053494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 81
Target Start/End: Original strand, 10359326 - 10359398
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||||||| |||||||| ||||   |||| || |||| |||||||||| ||||||||||| |||||||||||    
T  10359326 ctcactacacttttgatgctataagattaattttaccagaaaagtcattatcatgacttcaccatagaatttt 10359398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 81
Target Start/End: Complemental strand, 32432486 - 32432434
Alignment:
Q  30 atagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    |||||||||||||||||| |||| ||||| || |||||||| |||||||||||    
T  32432486 atagtgttaacttcaccagaaaaatcattttcgtgacttcaccatagaatttt 32432434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 7e-24; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 10 - 81
Target Start/End: Original strand, 43643712 - 43643784
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcaccaaaa-agtcattctcatgacttcatcatagaatttt 81  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  43643712 ctcattacatttttgatgttatagtgttaacttcaccaaaatagtcattctcatgacttcaccatagaatttt 43643784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 37970627 - 37970704
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacc-aaaaagtcattctcatgacttcatcatagaa 77  Q
    ||||| || |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  37970627 ggggtgttactcattacatttttgatgttatagtgttaacttcaccaaaaaagtcattctcatgacttcaccatagaa 37970704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 7891073 - 7891139
Alignment:
Q  18 atttttgatgttatagtgttaacttcaccaaaa-agtcattctcatgacttcatcatagaatttttc 83  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||    
T  7891073 atttttgatgttatagtgttaacttcacaaaaaaagtcattctcatgacttcaccatagaatttttc 7891139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 10 - 81
Target Start/End: Original strand, 1150222 - 1150294
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacc-aaaaagtcattctcatgacttcatcatagaatttt 81  Q
    |||| ||||||||||||||||||| |||||||||||| ||||||||||||| ||||||||| |||||||||||    
T  1150222 ctcattacatttttgatgttatagcgttaacttcaccaaaaaagtcattcttatgacttcaccatagaatttt 1150294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 10 - 69
Target Start/End: Complemental strand, 1205000 - 1204940
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttca 69  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  1205000 ctcactacattttttatgttatagtgttaacttcaccagaaaagtcattctcatgacttca 1204940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 10 - 81
Target Start/End: Original strand, 10555319 - 10555391
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacc-aaaaagtcattctcatgacttcatcatagaatttt 81  Q
    |||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| | |||||||||    
T  10555319 ctcattacattttttatgttatagtgttaacttcaccaaaaaagtcattctcatgacttcaccgtagaatttt 10555391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 13307696 - 13307624
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| ||| |||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||    
T  13307696 ctcacaacacttttgatgttatagtgttaacttcaccagaaaaatcattctcatgacttcaccatagaatttt 13307624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 15009306 - 15009243
Alignment:
Q  19 tttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||    
T  15009306 tttttgatgttatagtgttaacttcaccaaaaaagtcattcttatgacttcaccatagaatttt 15009243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 16446983 - 16447064
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| || ||||||||| ||||||||||||||||||||||| | || |||||||||| ||||||||||| |||||||||||    
T  16446983 ggggtgttactcactacaattttgatgttatagtgttaactttatcagaaaagtcattttcatgacttcaccatagaatttt 16447064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 27082946 - 27083027
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| || ||||||||| |||||||| ||||||||||||||||||| |||||||| ||| ||||||||| |||||||||||    
T  27082946 ggggtgttactcactacacttttgatgctatagtgttaacttcaccagaaaagtcagtctgatgacttcaccatagaatttt 27083027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 38644060 - 38643979
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacc-aaaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| || ||||| ||| ||||||||||||||||||||||| ||| |||||||||||||||||| |||| |||||||||||    
T  38644060 ggggtgttactcacaacacttttgatgttatagtgttaacttgaccaaaaaagtcattctcatgatttcaccatagaatttt 38643979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 10 - 69
Target Start/End: Original strand, 23854548 - 23854608
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacc-aaaaagtcattctcatgacttca 69  Q
    |||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  23854548 ctcattacattttttatgttatagtgttaacttcaccaaaaaagtcattctcatgacttca 23854608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 34895040 - 34894968
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||||||| | ||||||||||||||||||||||| || |||||||||| ||||||||||| |||||||||||    
T  34895040 ctcactacagtgttgatgttatagtgttaacttcatcagaaaagtcattttcatgacttcaccatagaatttt 34894968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 87
Target Start/End: Complemental strand, 16222936 - 16222858
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttttcttgt 87  Q
    ||||||| |||||| ||||||||||||||| ||||||| ||||||||||||||||| |||| | ||||||||| |||||    
T  16222936 ctcactatattttttatgttatagtgttaaattcaccagaaaagtcattctcatgatttcaccgtagaattttccttgt 16222858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 6098626 - 6098707
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacc-aaaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| || ||||||| |||||||||| |||||| ||||||||||| ||||||| ||| ||||||||||| |||||||||||    
T  6098626 ggggtgttactcactatatttttgatgctatagtattaacttcaccaaaaaagttattttcatgacttcaccatagaatttt 6098707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 36695074 - 36695155
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| || ||||| ||||||||||| ||||||||||||||||| || |||||||||| || |||||||| |||||||||||    
T  36695074 ggggtgttactcacaacatttttgatattatagtgttaacttcatcagaaaagtcattttcctgacttcaccatagaatttt 36695155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 465924 - 465840
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttttct 84  Q
    ||||| || ||||| ||| |||||||||||| ||||||||||||||| |||||||||| | ||||||||| |||| |||||||||    
T  465924 ggggtgttactcacaacacttttgatgttatcgtgttaacttcaccacaaaagtcattttaatgacttcaccataaaatttttct 465840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 10 - 81
Target Start/End: Original strand, 8803927 - 8803995
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacc-aaaaagtcattctcatgacttcatcatagaatttt 81  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||    ||||||||| |||||||||||    
T  8803927 ctcattacatttttgatgttatagtgttaacttcaccaaaaaagtcat----atgacttcaccatagaatttt 8803995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 5300073 - 5300135
Alignment:
Q  20 ttttgatgttatagtgttaacttcaccaaaa-agtcattctcatgacttcatcatagaatttt 81  Q
    |||||||| ||||||||||||||||  |||| ||||||||||||||||||| |||||||||||    
T  5300073 ttttgatgctatagtgttaacttcattaaaaaagtcattctcatgacttcaccatagaatttt 5300135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 24823399 - 24823473
Alignment:
Q  20 ttttgatgttatagtgttaacttcacc-aaaaagtcattctcatgacttcatcatagaatttttcttgtatttat 93  Q
    ||||||| ||||||||||||||||||| |||||||||||||||| |||| | ||||| ||||| ||| |||||||    
T  24823399 ttttgatattatagtgttaacttcaccaaaaaagtcattctcataactttaccatagtattttccttatatttat 24823473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 9864230 - 9864149
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| || ||||| |||||||||||  ||||||||||| ||||||| |||||||||| || ||||||||| ||||||||||    
T  9864230 ggggtgttactcacaacatttttgatactatagtgttaatttcaccaaaaaagtcattttcgtgacttcattatagaatttt 9864149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 30654691 - 30654772
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacc-aaaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| || |||| ||||||||| |||||||||||||||||||||| ||||| ||| ||| ||||||||| |||| ||||||    
T  30654691 ggggtgttactcattacattttttatgttatagtgttaacttcaccaaaaaaatcactcttatgacttcaccataaaatttt 30654772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 11727087 - 11727037
Alignment:
Q  20 ttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttca 69  Q
    |||||||||||||||||||||||||||| |||| |||||||||| ||||||    
T  11727087 ttttgatgttatagtgttaacttcaccaaaaaaatcattctcataacttca 11727037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 12876182 - 12876110
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| |||||||| || ||||||||||||||||| || |||||||||| || |||||| | |||||||||||    
T  12876182 ctcacaacattttttatattatagtgttaacttcatcagaaaagtcattttcgtgacttaaccatagaatttt 12876110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 33906297 - 33906225
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||||||| |||| ||  ||||||||| ||||||||| ||||||||||||||| | |||| |||||||||||    
T  33906297 ctcactacacttttaatactatagtgttgacttcaccagaaaagtcattctcataatttcaccatagaatttt 33906225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 35459823 - 35459887
Alignment:
Q  18 atttttgatgttatagtgttaacttcaccaaaa-agtcattctcatgacttcatcatagaatttt 81  Q
    |||||| || ||||||| ||||||| || |||| ||||||||||||||||||| |||||||||||    
T  35459823 attttttatattatagtattaactttacgaaaaaagtcattctcatgacttcaccatagaatttt 35459887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 83
Target Start/End: Original strand, 35735984 - 35736032
Alignment:
Q  36 ttaacttcaccaaaa-agtcattctcatgacttcatcatagaatttttc 83  Q
    ||||||||||||||| ||||||||| ||||||||| |||||||||||||    
T  35735984 ttaacttcaccaaaaaagtcattctaatgacttcaccatagaatttttc 35736032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 40862483 - 40862420
Alignment:
Q  19 tttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    |||||||| |||||||||||||||||||| |||||| ||| || ||||||||  ||||||||||    
T  40862483 tttttgatattatagtgttaacttcaccagaaaagttattttcgtgacttcactatagaatttt 40862420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 81
Target Start/End: Complemental strand, 41362570 - 41362519
Alignment:
Q  31 tagtgttaacttcaccaaaaa-gtcattctcatgacttcatcatagaatttt 81  Q
    ||||||||||||||||||||| |||||| |||| |||||| |||||||||||    
T  41362570 tagtgttaacttcaccaaaaaagtcattttcataacttcaccatagaatttt 41362519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 28220955 - 28221001
Alignment:
Q  36 ttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    |||||||||||| |||||||||| ||||||||| |||||||||||||    
T  28220955 ttaacttcaccagaaaagtcattttcatgactttatcatagaatttt 28221001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 83
Target Start/End: Original strand, 6446709 - 6446754
Alignment:
Q  39 acttcacca-aaaagtcattctcatgacttcatcatagaatttttc 83  Q
    ||||||||| |||||||||| ||||||||||| |||||||||||||    
T  6446709 acttcaccagaaaagtcattatcatgacttcaccatagaatttttc 6446754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 81
Target Start/End: Complemental strand, 7998397 - 7998364
Alignment:
Q  48 aaaagtcattctcatgacttcatcatagaatttt 81  Q
    |||||||||||||||||||||| |||||||||||    
T  7998397 aaaagtcattctcatgacttcaccatagaatttt 7998364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 31933994 - 31934063
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacc-aaaaagtcattctcatgacttca 69  Q
    ||||| || |||| || ||||||||| | ||||||||||||||||| ||||| |||||||||| ||||||    
T  31933994 ggggtgttactcattatatttttgatatcatagtgttaacttcaccaaaaaaatcattctcataacttca 31934063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 81
Target Start/End: Original strand, 39099265 - 39099298
Alignment:
Q  48 aaaagtcattctcatgacttcatcatagaatttt 81  Q
    |||||||||||||||||||||| |||||||||||    
T  39099265 aaaagtcattctcatgacttcaccatagaatttt 39099298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 41911097 - 41911177
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcaccaaaaag-tcattctcatgacttcatcatagaatttt 81  Q
    ||||| || ||||| ||| |||||||| |||||| ||||||||||||||||  ||||  ||||||||||||| |||||||||    
T  41911097 ggggtgttactcacgacacttttgatgatatagtattaacttcaccaaaaaaatcata-tcatgacttcatcgtagaatttt 41911177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 83
Target Start/End: Original strand, 23176763 - 23176811
Alignment:
Q  36 ttaacttcaccaaaa-agtcattctcatgacttcatcatagaatttttc 83  Q
    ||||||||||||||| ||||||| ||||||||||| ||||||| |||||    
T  23176763 ttaacttcaccaaaaaagtcattttcatgacttcaccatagaaattttc 23176811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 81
Target Start/End: Original strand, 34952148 - 34952220
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| ||| |||||||| |||||||||||||| |||| |||||||||| | ||||||| |  ||||||||||    
T  34952148 ctcacaacacttttgatgatatagtgttaacttgaccagaaaagtcattttaatgactttactatagaatttt 34952220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 7e-24; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 25184187 - 25184115
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcaccaaaa-agtcattctcatgacttcatcatagaatttt 81  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  25184187 ctcattacatttttgatgttatagtgttaacttcaccaaaatagtcattctcatgacttcaccatagaatttt 25184115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 87
Target Start/End: Original strand, 32912717 - 32912795
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacc-aaaaagtcattctcatgacttcatcatagaatttttcttgt 87  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||| |||||    
T  32912717 ctcattacatttttgatgttatagtgttaacttcaccaaaaaagtcattcttatgacttcaccatagaattttccttgt 32912795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 81
Target Start/End: Original strand, 35021172 - 35021244
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||| |||||||||||    
T  35021172 ctcactacatttttgatgttataatgttaacttcaccagaaaagtcattttcatgacttcaccatagaatttt 35021244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 55478037 - 55478113
Alignment:
Q  15 tacatttttgatgttatagtgttaacttcacc-aaaaagtcattctcatgacttcatcatagaatttttcttgtatt 90  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||| ||| ||||    
T  55478037 tacatttttgatgttatagtgttaacttcaccaaaaaaatcattctcatgacttcaccatagaattttccttatatt 55478113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 34361619 - 34361706
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacc-aaaaagtcattctcatgacttcatcatagaatttttcttgt 87  Q
    ||||| || |||| ||||||||| |||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||| |||||    
T  34361619 ggggtgttactcattacattttttatgttatagtgttaacttcaccaaaaaagtcattcttatgacttcaccatagaattttccttgt 34361706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 10 - 83
Target Start/End: Complemental strand, 47253823 - 47253749
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcaccaaaaa-gtcattctcatgacttcatcatagaatttttc 83  Q
    ||||| ||| |||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  47253823 ctcacaacacttttgatgatatagtgttaacttcaccaaaaaagtcattctcatgacttcaccatagaatttttc 47253749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 81
Target Start/End: Complemental strand, 38011927 - 38011856
Alignment:
Q  11 tcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    |||||||| |||||||||||||||||| ||||||||| ||||||||||||||||| |||| |||||||||||    
T  38011927 tcactacacttttgatgttatagtgttgacttcaccagaaaagtcattctcatgatttcaccatagaatttt 38011856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 7703581 - 7703519
Alignment:
Q  20 ttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| | |||||||||||    
T  7703581 ttttgatgttatagtgttaacttcaccagaaaagtcattctcatgactttaacatagaatttt 7703519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 28003126 - 28003195
Alignment:
Q  13 actacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    |||||| |||||||| ||||||||| ||||||||| |||||||||||||||||||||| |||||||||||    
T  28003126 actacacttttgatgctatagtgttgacttcaccagaaaagtcattctcatgacttcaccatagaatttt 28003195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 34948225 - 34948306
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| || ||||| ||| |||||||||||||||||||||||| ||| |||||||||||||||||||||| |||| ||||||    
T  34948225 ggggtgttactcacaacacttttgatgttatagtgttaacttcgccagaaaagtcattctcatgacttcaccataaaatttt 34948306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 39398001 - 39397920
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| || ||||| ||| |||| ||||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||    
T  39398001 ggggtgttactcacaacacttttaatgttatagtgttaacttcaccataaaagtcattctaatgacttcaccatagaatttt 39397920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 15 - 81
Target Start/End: Original strand, 19440790 - 19440858
Alignment:
Q  15 tacatttttgatgttatagtgttaacttcacc-aaaaagtcattctcatgac-ttcatcatagaatttt 81  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||| |||||||||||    
T  19440790 tacatttttgatgttatagtgttaacatcaccaaaaaagtcattctcatgactttcaccatagaatttt 19440858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 36493816 - 36493899
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacc-aaaaagtcattctcatgacttcatcatagaatttttc 83  Q
    ||||| || ||||||| |||||||||| |||||| ||||||||||| ||||||| ||| ||||||||||| |||||||||||||    
T  36493816 ggggtgttactcactatatttttgatggtatagtattaacttcaccaaaaaagttattttcatgacttcaccatagaatttttc 36493899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 37287817 - 37287735
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacc--aaaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| || ||||| ||| ||||||||||||||||||||||| |||  |||||||||||||||| |||||| |||||||||||    
T  37287817 ggggtgttactcacaacacttttgatgttatagtgttaactttaccaaaaaaagtcattctcattacttcaccatagaatttt 37287735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 83
Target Start/End: Original strand, 5048102 - 5048176
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttttc 83  Q
    ||||||||| |||||||||||||| ||| ||||||||| |||| |||||||||| ||||||| ||||||||||||    
T  5048102 ctcactacacttttgatgttatagagttgacttcaccagaaaaatcattctcataacttcattatagaatttttc 5048176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 17272075 - 17272013
Alignment:
Q  20 ttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    |||||||||||||||||||||||||||| ||||||||||| || ||||||| |||||||||||    
T  17272075 ttttgatgttatagtgttaacttcaccagaaaagtcattcccacgacttcaccatagaatttt 17272013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 27396680 - 27396614
Alignment:
Q  20 ttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttttctt 85  Q
    |||| ||| |||| |||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  27396680 ttttaatgctataatgttaacttcaccagaaaagtcattctcatgacttcaccatagaatttttctt 27396614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 29584345 - 29584407
Alignment:
Q  20 ttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    |||||||||||||||||||||||||||| ||||||||||| || ||||||| |||||||||||    
T  29584345 ttttgatgttatagtgttaacttcaccagaaaagtcattcccacgacttcaccatagaatttt 29584407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 26 - 83
Target Start/End: Complemental strand, 52516655 - 52516597
Alignment:
Q  26 tgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttttc 83  Q
    |||||||||||||||||||||| |||||||||||||||||||||| |||| ||||||||    
T  52516655 tgttatagtgttaacttcaccataaaagtcattctcatgacttcaccataaaatttttc 52516597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 21 - 81
Target Start/End: Complemental strand, 4598056 - 4597995
Alignment:
Q  21 tttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||| |||| ||||||    
T  4598056 tttgatgttatagtgttaacttcaccagaaaagtcattctaatgacttcaccataaaatttt 4597995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 42199812 - 42199731
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    |||||||| |||| |||||||||||||||||||| |||||||||||| |||| ||||||| |||| |||| |||||| ||||    
T  42199812 ggggtattactcattacatttttgatgttatagtattaacttcaccaaaaaaatcattcttatgatttcaccatagattttt 42199731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 53124370 - 53124289
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| || |||| || |||||||||||||||||||||||||||||| |||| ||||| | |||||||||||||| ||||||    
T  53124370 ggggtgttactcattatatttttgatgttatagtgttaacttcaccaaaaaaatcattttaatgacttcatcatataatttt 53124289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 81
Target Start/End: Original strand, 25701194 - 25701266
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacc-aaaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||||||| ||||||||||||| ||||||||| ||| ||||||||||| ||||||||||| |||| ||||||    
T  25701194 ctcactacacttttgatgttataatgttaactttaccaaaaaagtcattatcatgacttcaccataaaatttt 25701266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 81
Target Start/End: Original strand, 35025725 - 35025797
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||||||| |||||||| ||||||||| ||||||||| |||| ||||| ||||||||||| |||||||||||    
T  35025725 ctcactacacttttgatgctatagtgttgacttcaccagaaaaatcattttcatgacttcagcatagaatttt 35025797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 4396409 - 4396322
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcac-caaaaagtcattctcatgacttcatcatagaatttttcttgt 87  Q
    ||||| || |||| ||||||||| |||||||||||||||||||||  ||||||||||| | |||||||||  |||||||||| |||||    
T  4396409 ggggtgttactcattacattttttatgttatagtgttaacttcactaaaaaagtcatttttatgacttcactatagaattttccttgt 4396322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 6864101 - 6864038
Alignment:
Q  18 atttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaattt 80  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||| ||| |||| |||||    
T  6864101 atttttgatgttatagtgataacttcaccaaaaaagtcattctcatgacatcaccatacaattt 6864038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 49376050 - 49375968
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacca--aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| || ||||| ||| |||||||| |||| ||||||||||||||  |||||||||||||||||||||| | |||||||||    
T  49376050 ggggtgttactcacgacacttttgatgctataatgttaacttcaccagaaaaagtcattctcatgacttcaccgtagaatttt 49375968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 4205184 - 4205118
Alignment:
Q  16 acatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||||||||| ||||||||||||||||| || |||||||||| || |||||||| |||||||||||    
T  4205184 acatttttgatattatagtgttaacttcatcagaaaagtcattttcctgacttcaccatagaatttt 4205118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 3042694 - 3042613
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    |||||||| |||| ||||||||  ||||||||||||||||||||||| |||| ||||| | |||| |||| |||||||||||    
T  3042694 ggggtattactcattacattttgtatgttatagtgttaacttcaccaaaaaaatcatttttatgatttcaccatagaatttt 3042613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 19089581 - 19089662
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttca-ccaaaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| || |||| |||| ||||||| ||||||||||||||||| | ||||||| ||||| ||||||||| |||||||||||    
T  19089581 ggggtgttactcattacaattttgatattatagtgttaacttcatcaaaaaagttattcttatgacttcaccatagaatttt 19089662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 82
Target Start/End: Original strand, 20097485 - 20097538
Alignment:
Q  30 atagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaattttt 82  Q
    |||| ||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  20097485 atagggttaacttcaccagaaaagtcattctcatgacttcaccatagaattttt 20097538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 69
Target Start/End: Original strand, 879685 - 879745
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacc-aaaaagtcattctcatgacttca 69  Q
    |||| ||||||||||||||||||||||| |||||||| ||||| | |||||||||||||||    
T  879685 ctcattacatttttgatgttatagtgtttacttcaccaaaaaaattattctcatgacttca 879745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 81
Target Start/End: Original strand, 7152243 - 7152315
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||||| | ||||||||||||| ||||||||| |||| ||||||||||  |||||||||| |||||||||||    
T  7152243 ctcactatacttttgatgttataatgttaactttaccagaaaagtcattagcatgacttcaccatagaatttt 7152315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 33341459 - 33341395
Alignment:
Q  20 ttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttttc 83  Q
    |||||||| ||||||||||| ||||||| |||| |||||||||||||||||  ||||||||||||    
T  33341459 ttttgatgatatagtgttaatttcaccagaaaaatcattctcatgacttcactatagaatttttc 33341395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 17173373 - 17173290
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttttc 83  Q
    ||||| || ||||| ||||||||||| ||||| ||||||||||| || |||||||||| || | |||||| |||||||||||||    
T  17173373 ggggtgttactcacaacatttttgatattataatgttaacttcatcagaaaagtcattttcgtaacttcaccatagaatttttc 17173290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 38812260 - 38812306
Alignment:
Q  36 ttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    |||||||||||| |||||||||||||||||||||| |||||||||||    
T  38812260 ttaacttcaccagaaaagtcattctcatgacttcaccatagaatttt 38812306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 55241251 - 55241313
Alignment:
Q  20 ttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    |||||||  |||||| |||||||||| | |||||||||||||||||||||| |||||||||||    
T  55241251 ttttgataatatagtattaacttcactagaaaagtcattctcatgacttcaccatagaatttt 55241313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 17167796 - 17167715
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| || ||||| ||||||||||| ||||| ||||||||||| || |||||||||| || | |||||| |||||||||||    
T  17167796 ggggtgttactcacaacatttttgatattataatgttaacttcatcagaaaagtcattttcgtaacttcaccatagaatttt 17167715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 46888285 - 46888354
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttca 69  Q
    |||||||| ||||||||| ||||||||||||||| ||||||||| || |||||| ||| || ||||||||    
T  46888285 ggggtattactcactacaattttgatgttatagtattaacttcatcagaaaagttattttcttgacttca 46888354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 32579518 - 32579446
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    |||||| || ||||||||||||| |||| ||||||||| ||||||||||||||  |||||| |||| ||||||    
T  32579518 ctcactgcacttttgatgttataatgttgacttcaccagaaaagtcattctcagaacttcaccataaaatttt 32579446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 28293236 - 28293283
Alignment:
Q  35 gttaacttcacc-aaaaagtcattctcatgacttcatcatagaatttt 81  Q
    |||||||||||| ||||||||||||||||||||||| | |||||||||    
T  28293236 gttaacttcaccgaaaaagtcattctcatgacttcagcgtagaatttt 28293283  T

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Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 84
Target Start/End: Original strand, 33816670 - 33816745
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttttct 84  Q
    ||||||||| |||||||| || | |||| ||||||||| |||| ||||||||||||||| | |||| |||||||||    
T  33816670 ctcactacacttttgatgctacaatgttgacttcaccagaaaaatcattctcatgacttaagcatataatttttct 33816745  T

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Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 81
Target Start/End: Original strand, 37663897 - 37663948
Alignment:
Q  31 tagtgttaacttcaccaaaa-agtcattctcatgacttcatcatagaatttt 81  Q
    |||||||||||||| ||||| ||||||||| ||||||||| |||||||||||    
T  37663897 tagtgttaacttcatcaaaaaagtcattcttatgacttcaccatagaatttt 37663948  T

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Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 38811861 - 38811815
Alignment:
Q  36 ttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    |||||||||||| |||| ||||||||||||||||| |||||||||||    
T  38811861 ttaacttcaccagaaaaatcattctcatgacttcaccatagaatttt 38811815  T

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Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 54499367 - 54499425
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattc 58  Q
    ||||| || ||||| ||| |||||||| ||||||||||||||||||| |||||||||||    
T  54499367 ggggtgttactcacaacacttttgatgctatagtgttaacttcaccagaaaagtcattc 54499425  T

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Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 54995799 - 54995845
Alignment:
Q  36 ttaacttcaccaaaa-agtcattctcatgacttcatcatagaatttt 81  Q
    ||||||||||||||| ||||||| ||||||||||||| |||||||||    
T  54995799 ttaacttcaccaaaaaagtcattatcatgacttcatcgtagaatttt 54995845  T

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Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 23761146 - 23761089
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgact 66  Q
    ||||| ||| ||||||||||||||||||||||| || | || ||||||||||||||||    
T  23761146 ctcacaacacttttgatgttatagtgttaactttacaagaatagtcattctcatgact 23761089  T

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Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 37775752 - 37775671
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| || ||||| |||||||| || |||||||| ||||||||||| |||| ||||| | ||||||||| | |||||||||    
T  37775752 ggggtgttactcacaacatttttaatattatagtgctaacttcaccaaaaaaatcattttaatgacttcaccgtagaatttt 37775671  T

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Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 9139313 - 9139249
Alignment:
Q  18 atttttgatgttatagtgttaacttcaccaaaaa-gtcattctcatgacttcatcatagaatttt 81  Q
    |||||| ||| ||||  ||||||||||||||||| |||| | ||||||||||| |||||||||||    
T  9139313 attttttatgctataacgttaacttcaccaaaaaagtcaatttcatgacttcaccatagaatttt 9139249  T

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Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 81
Target Start/End: Original strand, 30002761 - 30002833
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| ||| |||||||| || |||||||||||||||| |||| ||||| | ||||||||| |||||| ||||    
T  30002761 ctcacaacacttttgatgctacagtgttaacttcaccagaaaaatcattttaatgacttcaccatagagtttt 30002833  T

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Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 81
Target Start/End: Complemental strand, 51204633 - 51204581
Alignment:
Q  30 atagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    |||| ||||||||||||| |||||||||| | ||||||||| |||||||||||    
T  51204633 atagggttaacttcaccagaaaagtcatttttatgacttcaccatagaatttt 51204581  T

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Target: chr2 (Bit Score: 55; Significance: 1e-22; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 43770959 - 43771041
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcaccaaaaagtcattctcatgacttcatcatagaatttttc 83  Q
    ||||| || ||||| ||| |||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||    
T  43770959 ggggtgttactcacaacacttttgatgttatagtgttaacttcaccaaaaaatcattctaatgacttcaccatagaatttttc 43771041  T

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Target: chr2; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 33551106 - 33551187
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcac-caaaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| || ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| | |||||||||    
T  33551106 ggggtgttactcactacatttttgatgttatagtgttaacttcactaaaaaagtcattctcatgacttcaccgtagaatttt 33551187  T

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Target: chr2; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 17054228 - 17054297
Alignment:
Q  13 actacatttttgatgttatagtgttaacttcacc-aaaaagtcattctcatgacttcatcatagaatttt 81  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||| |||||||||| |||||||||||    
T  17054228 actacatttttgatgttatagtattaacttcaccaaaaaagtcattcgcatgacttcaccatagaatttt 17054297  T

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Target: chr2; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 17071869 - 17071938
Alignment:
Q  13 actacatttttgatgttatagtgttaacttcacc-aaaaagtcattctcatgacttcatcatagaatttt 81  Q
    |||||||||||| ||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||    
T  17071869 actacatttttgttgttatagtgttaacttcaccaaaaaagtcattcgcatgacttcaccatagaatttt 17071938  T

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Target: chr2; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 41465583 - 41465511
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    |||||||||  ||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  41465583 ctcactacacctttgatgctatagtgttaacttcaccagaaaagtcattctcatgacttcaccatagaatttt 41465511  T

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Target: chr2; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 33902149 - 33902070
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    |||||||| |||||||||||||| ||||||  ||||||||||||||| |||||||||||| | |||||||||||||||||||    
T  33902149 ggggtattactcactacattttttatgtta--gtgttaacttcaccagaaaagtcattctaacgacttcatcatagaatttt 33902070  T

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Target: chr2; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 19424748 - 19424829
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| || ||||| ||| |||||||||||||||||||||||||||| ||||| |||||||||||||||| |||| ||||||    
T  19424748 ggggtgttactcacaacacttttgatgttatagtgttaacttcaccagaaaagccattctcatgacttcaccataaaatttt 19424829  T

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Target: chr2; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 35958992 - 35958911
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| ||||||| ||||||||| |||||||||||  |||||||||| |||||||||| | |||||||||||||||||||||    
T  35958992 ggggtgttgctcattacattttttatgttatagtggcaacttcaccaaaaaagtcatttttatgacttcatcatagaatttt 35958911  T

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Target: chr2; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 10 - 81
Target Start/End: Original strand, 11366510 - 11366582
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacc-aaaaagtcattctcatgacttcatcatagaatttt 81  Q
    |||| ||||||||||||||||||||||||| |||||| ||||||||||||| |||| |||| |||||||||||    
T  11366510 ctcattacatttttgatgttatagtgttaatttcaccaaaaaagtcattcttatgatttcaccatagaatttt 11366582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 26357651 - 26357579
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||||||| ||||||||||||||||||||||||| || |||||||||| ||||||||||| |||| ||||||    
T  26357651 ctcactacagttttgatgttatagtgttaacttcatcagaaaagtcattttcatgacttcaccataaaatttt 26357579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 10 - 84
Target Start/End: Original strand, 41463979 - 41464054
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcaccaaaaa-gtcattctcatgacttcatcatagaatttttct 84  Q
    ||||| ||| ||||||| ||||||| |||||||||||||||| |||||||||| ||||||| ||||||||||||||    
T  41463979 ctcacaacacttttgattttatagtattaacttcaccaaaaatgtcattctcacgacttcaccatagaatttttct 41464054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 36642050 - 36641984
Alignment:
Q  20 ttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttttctt 85  Q
    |||||||| |||||| |||| ||||||| |||||||||||||||||||||| |||||||||||||||    
T  36642050 ttttgatgctatagtattaatttcaccagaaaagtcattctcatgacttcaccatagaatttttctt 36641984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 81
Target Start/End: Complemental strand, 37905777 - 37905711
Alignment:
Q  15 tacatttttgatgttatagtgttaacttcaccaaaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||||||| ||||||||||||||||||||||||||| ||||| | || |||||| |||||||||||    
T  37905777 tacattttttatgttatagtgttaacttcaccaaaaaatcatttttataacttcaccatagaatttt 37905711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 13711547 - 13711466
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| || ||||| ||| |||||||| |||| |||||||||||||| |||||||||||| ||||||||| |||||||||||    
T  13711547 ggggtgttactcacaacacttttgatgctataatgttaacttcaccagaaaagtcattctgatgacttcaccatagaatttt 13711466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 18494388 - 18494469
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| || ||||| ||| |||||||| ||||||||||||||||||| |||||||||| ||||||||||| || ||||||||    
T  18494388 ggggtgttactcacaacacttttgatgctatagtgttaacttcaccagaaaagtcattttcatgacttcaccacagaatttt 18494469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 19313926 - 19313854
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| ||| |||||||| |||| |||||||||||||| |||||||||||| ||||||||| |||||||||||    
T  19313926 ctcacaacacttttgatgctataatgttaacttcaccagaaaagtcattctaatgacttcaccatagaatttt 19313854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 83
Target Start/End: Original strand, 33660497 - 33660571
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttttc 83  Q
    ||||| ||| ||||||||||||||||||||||| || | |||||||||| | ||||||||| |||||||||||||    
T  33660497 ctcacaacacttttgatgttatagtgttaacttaactagaaaagtcattttaatgacttcaccatagaatttttc 33660571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 43648374 - 43648416
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcaccaaaaag 52  Q
    |||| ||||||||||||||||||||||||||||||||||||||    
T  43648374 ctcattacatttttgatgttatagtgttaacttcaccaaaaag 43648416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 2325490 - 2325571
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| || |||| ||||||| |||||||||| |||||||||||| | ||||||||||| ||| |||||| |||||||||||    
T  2325490 ggggtgttactcaatacatttatgatgttatattgttaacttcacgagaaaagtcattcacataacttcaccatagaatttt 2325571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 81
Target Start/End: Original strand, 4264206 - 4264278
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| ||| |||||||| |||||||||||||| |||| |||||||||| | ||||||||| |||||||||||    
T  4264206 ctcacaacacttttgatgctatagtgttaactttaccagaaaagtcattatgatgacttcaccatagaatttt 4264278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 86
Target Start/End: Original strand, 31570873 - 31570940
Alignment:
Q  20 ttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttttcttg 86  Q
    |||| ||||||||||||||| ||||||| |||||| |||||||| |||||| ||||||||||| ||||    
T  31570873 ttttaatgttatagtgttaatttcaccagaaaagttattctcataacttcaccatagaattttccttg 31570940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 44913735 - 44913664
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcaccaaaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| |||||||||||  || ||||||||||||||  |||||||||| || |||||||| |||||||||||    
T  44913735 ctcacaacatttttgatactacagtgttaacttcacataaaagtcattttcgtgacttcaccatagaatttt 44913664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 4763714 - 4763630
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgtt---aacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| || ||||||||| ||||| || |||||||||   ||||||| || |||||||||| |||||||||||||||||||||||    
T  4763714 ggggtgttactcactacagttttgttgatatagtgttgttaacttcatcagaaaagtcattttcatgacttcatcatagaatttt 4763630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 81
Target Start/End: Original strand, 29242269 - 29242339
Alignment:
Q  12 cactacatttttgatgttatagtgttaacttcacc-aaaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| |||||| |||||||||| ||||||||||| |||||  |||| ||||||||||| |||||||||||    
T  29242269 cactatattttttatgttatagttttaacttcaccaaaaaaaccattttcatgacttcaccatagaatttt 29242339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 41960947 - 41960885
Alignment:
Q  20 ttttgatgttatagtgttaacttca-ccaaaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||||||||||||||||||||||| | |||||||||||   ||||||||| |||||||||||    
T  41960947 ttttgatgttatagtgttaacttcatcaaaaaagtcatttctatgacttcaccatagaatttt 41960885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 3177007 - 3176938
Alignment:
Q  16 acatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttttct 84  Q
    ||||||||||| ||||||| ||||||||| || |||||||||| || | |||||| ||||||||||||||    
T  3177007 acatttttgatattatagtattaacttcatcagaaaagtcattttcgtaacttcaccatagaatttttct 3176938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 4167005 - 4166924
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| || ||||| | |||||||||  |||| |||||||||||||| |||||||||| || |||||||| |||||||||||    
T  4167005 ggggtgttactcacaatatttttgatactataatgttaacttcaccagaaaagtcattttcgtgacttcaccatagaatttt 4166924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 4478443 - 4478402
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcaccaaaaa 51  Q
    ||||| ||| ||||||||||||||||||||||||||||||||    
T  4478443 ctcacaacacttttgatgttatagtgttaacttcaccaaaaa 4478402  T

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Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 51
Target Start/End: Original strand, 27350067 - 27350108
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcaccaaaaa 51  Q
    ||||| |||||||||||| |||||||||||||||||||||||    
T  27350067 ctcacaacatttttgatgctatagtgttaacttcaccaaaaa 27350108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 84
Target Start/End: Complemental strand, 41643920 - 41643871
Alignment:
Q  36 ttaacttcaccaaaaa-gtcattctcatgacttcatcatagaatttttct 84  Q
    |||||||||||||||| |||||| ||||||||||| ||||||||||||||    
T  41643920 ttaacttcaccaaaaaagtcattatcatgacttcaccatagaatttttct 41643871  T

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Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 81
Target Start/End: Original strand, 43446463 - 43446508
Alignment:
Q  37 taacttcacc-aaaaagtcattctcatgacttcatcatagaatttt 81  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||    
T  43446463 taacttcaccgaaaaagtcattctcatgacttcaccatagaatttt 43446508  T

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Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 19289443 - 19289529
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcaccaaaaa-gtcattctcatgacttcatcatagaatttttcttgtattt 91  Q
    ||||| || |||| || ||||||||||||||||||||||||||| |||||| ||||||     ||||||| ||||||||||| ||| |||||    
T  19289443 ggggtgttactcattatatttttgatgttatagtgttaacttcatcaaaaaagtcatt-----gacttcaccatagaattttccttttattt 19289529  T

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Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 31861943 - 31861897
Alignment:
Q  36 ttaacttcaccaaaaa-gtcattctcatgacttcatcatagaatttt 81  Q
    |||||||||||||||| ||||||||||| |||||| |||||||||||    
T  31861943 ttaacttcaccaaaaaagtcattctcataacttcaccatagaatttt 31861897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 44286028 - 44285950
Alignment:
Q  5 tattgctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaattttt 82  Q
    |||||||| | ||| |||||||| |||||||||||||||| || |||| |||||| |||||||||| | || |||||||    
T  44286028 tattgctcgcaacacttttgatgctatagtgttaacttcatcagaaaaatcattcgcatgacttcaccgtataattttt 44285950  T

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Target: chr1 (Bit Score: 55; Significance: 1e-22; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 83
Target Start/End: Complemental strand, 15752099 - 15752025
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttttc 83  Q
    ||||||| |||||| ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  15752099 ctcactatattttttatgttatagtgttaacttcaccaaaaaagtcattctcatgacttcaccatagaatttttc 15752025  T

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Target: chr1; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 1547357 - 1547285
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  1547357 ctcacaacattttttatgttatagtgttaacttcaccagaaaagtcattctcatgacttcaccatagaatttt 1547285  T

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Target: chr1; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 86
Target Start/End: Complemental strand, 16415715 - 16415638
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttttcttg 86  Q
    ||||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||||| | ||||||||| ||||    
T  16415715 ctcactacacttttgatgctatagtgttaacttcaccagaaaagtcattctcatgacttcaccttagaattttccttg 16415638  T

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Target: chr1; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 2959815 - 2959746
Alignment:
Q  13 actacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    |||||| ||||||||||||||||||||||||| || |||||||||| ||||||||||| |||||||||||    
T  2959815 actacagttttgatgttatagtgttaacttcatcagaaaagtcattttcatgacttcaccatagaatttt 2959746  T

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Target: chr1; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 3309218 - 3309146
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| ||| ||||||||||||||||||||||| |||| |||||||||||||||||||| | |||||||||||    
T  3309218 ctcacaacacttttgatgttatagtgttaactttaccagaaaagtcattctcatgactttaccatagaatttt 3309146  T

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Target: chr1; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 10 - 69
Target Start/End: Complemental strand, 14758111 - 14758051
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttca 69  Q
    ||||||||| |||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  14758111 ctcactacacttttgatgttatagtgttgacttcaccagaaaagtcattctcatgacttca 14758051  T

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Target: chr1; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 18422713 - 18422649
Alignment:
Q  18 atttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    |||||||||||||||||||||||||||||| |||||||||| | ||||||||| |||||||||||    
T  18422713 atttttgatgttatagtgttaacttcaccaaaaaagtcatttttatgacttcaccatagaatttt 18422649  T

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Target: chr1; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 37619010 - 37619074
Alignment:
Q  18 atttttgatgttatagtgttaacttcacc-aaaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||||||||||||||||||||||||||| ||||||||||||| || |||||| |||||||||||    
T  37619010 atttttgatgttatagtgttaacttcaccaaaaaagtcattcttataacttcaccatagaatttt 37619074  T

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Target: chr1; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 15 - 81
Target Start/End: Original strand, 19899880 - 19899947
Alignment:
Q  15 tacatttttgatgttatagtgttaacttcacc-aaaaagtcattctcatgacttcatcatagaatttt 81  Q
    |||||||||||||||||||||||||||||||| ||||| ||||| | ||||||||| |||||||||||    
T  19899880 tacatttttgatgttatagtgttaacttcaccaaaaaaatcattattatgacttcaccatagaatttt 19899947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 10 - 92
Target Start/End: Complemental strand, 28769723 - 28769640
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcac-caaaaagtcattctcatgacttcatcatagaatttttcttgtattta 92  Q
    |||| |||||||||||||| ||||||||||||||||  ||||||| ||| | ||||||||| ||||||||||||| ||||||||    
T  28769723 ctcattacatttttgatgtcatagtgttaacttcacaaaaaaagttatttttatgacttcaccatagaatttttcatgtattta 28769640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 15 - 81
Target Start/End: Complemental strand, 30254923 - 30254856
Alignment:
Q  15 tacatttttgatgttatagtgttaacttca-ccaaaaagtcattctcatgacttcatcatagaatttt 81  Q
    |||||||||||||||||||||||||||||| | ||||||||||| | ||||||||| |||||||||||    
T  30254923 tacatttttgatgttatagtgttaacttcatcaaaaaagtcattattatgacttcaccatagaatttt 30254856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 81
Target Start/End: Complemental strand, 30254500 - 30254422
Alignment:
Q  4 gtattgctcactacatttttgatgttatagtgttaacttc-accaaaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| |||| |||||||||||||||||| |||||||||| || ||||||||||||| || |||||| |||||||||||    
T  30254500 gtattactcattacatttttgatgttatattgttaacttcaacaaaaaagtcattcttataacttcaccatagaatttt 30254422  T

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Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 38823274 - 38823212
Alignment:
Q  20 ttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    |||||||| |||||||||||||| |||| |||||||||||||||||||||| |||||||||||    
T  38823274 ttttgatgctatagtgttaacttaaccagaaaagtcattctcatgacttcaccatagaatttt 38823212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 10922806 - 10922725
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| || |||| ||||||||| ||||||||||||||||||||||| |||| |||||||||||| |||| |||| ||||||    
T  10922806 ggggtcttactcattacattttttatgttatagtgttaacttcaccaaaaaaatcattctcatgatttcaccataaaatttt 10922725  T

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Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 32267113 - 32267032
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcac-caaaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| || |||| |||||||||||||||||| ||||||||||||  ||||||||||||| ||||||||| |||| ||||||    
T  32267113 ggggtgttactcattacatttttgatgttatattgttaacttcacaaaaaaagtcattcttatgacttcaccataaaatttt 32267032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 46931490 - 46931404
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcac----caaaaagtcattctcatgacttcatcatagaatttttc 83  Q
    |||||||| |||| |||||||||||||||||||||||||||||||     ||||| ||||||| || |||||| |||||||||||||    
T  46931490 ggggtattactcattacatttttgatgttatagtgttaacttcacaaaaaaaaaattcattcttataacttcaccatagaatttttc 46931404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 8222201 - 8222129
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcaccaaaaa-gtcattctcatgacttcatcatagaatttt 81  Q
    |||| ||||||||||||||||||||||||||||||| ||||| |||||| | ||||||||| | |||||||||    
T  8222201 ctcattacatttttgatgttatagtgttaacttcactaaaaaggtcatttttatgacttcaccgtagaatttt 8222129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 15383003 - 15382931
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    |||| ||||||||||||||||||||||||| ||||||| |||||||||| | || |||||| |||||||||||    
T  15383003 ctcattacatttttgatgttatagtgttaatttcaccaaaaaagtcatttttataacttcaccatagaatttt 15382931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 81
Target Start/End: Original strand, 30327050 - 30327130
Alignment:
Q  2 gggtattgctcactacatttttgatgttatagtgttaacttcac-caaaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||||| |||| ||||||||||||||||||||||||| |||||  ||||||||||| | |||||||||  ||||||||||    
T  30327050 gggtattactcattacatttttgatgttatagtgttaaattcacaaaaaaagtcatttttatgacttcactatagaatttt 30327130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 81
Target Start/End: Original strand, 34012483 - 34012555
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||||||| | ||||||||||||||||||||||| || ||| |||||| ||||||||||| |||||||||||    
T  34012483 ctcactacagtgttgatgttatagtgttaacttcatcataaacgtcattttcatgacttcaccatagaatttt 34012555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 41926238 - 41926158
Alignment:
Q  5 tattgctcactacatttttgatgttatagtgttaacttca-ccaaaaagtcattctcatgacttcatcatagaatttttct 84  Q
    |||| ||||||| ||||||||||||||||| ||||||||| | ||||| ||||| |||| |||||| ||||||||||||||    
T  41926238 tattactcactatatttttgatgttatagtattaacttcatcaaaaaaatcattttcataacttcaccatagaatttttct 41926158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 20 - 78
Target Start/End: Original strand, 27533096 - 27533155
Alignment:
Q  20 ttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaat 78  Q
    |||||||| ||||||||||||||||||| ||||||||||||||| |||| ||||||||||    
T  27533096 ttttgatgctatagtgttaacttcaccagaaaagtcattctcataactttatcatagaat 27533155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 27763416 - 27763491
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcaccaaaaagtcattctcatgacttcatcatagaatttttctt 85  Q
    |||| ||||||||||||||||||||||||||||||| ||||| ||||||| || |||| | |||| | ||||||||    
T  27763416 ctcattacatttttgatgttatagtgttaacttcacaaaaaaatcattcttataactttaccataaattttttctt 27763491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 81
Target Start/End: Original strand, 10182116 - 10182186
Alignment:
Q  12 cactacatttttgatgttatagtgttaacttcaccaaaa-agtcattctcatgacttcatcatagaatttt 81  Q
    ||||| |||||| |||||| ||| ||||||||||||||| ||||||| ||||||||||| |||||||||||    
T  10182116 cactatattttttatgttacagttttaacttcaccaaaaaagtcattttcatgacttcaccatagaatttt 10182186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 7079171 - 7079252
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacc-aaaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| || ||||| ||| ||||||| ||||||||||||||||||| ||||||||||| ||||||||| | |||| ||||||    
T  7079171 ggggtgttactcacaacacttttgatattatagtgttaacttcaccaaaaaagtcattatcatgactttaccataaaatttt 7079252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 81
Target Start/End: Original strand, 31621670 - 31621731
Alignment:
Q  21 tttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||||||||||||||| ||||||| | |||||||||||||||||||||| | |||||||||    
T  31621670 tttgatgttatagtgttgacttcactagaaaagtcattctcatgacttcaccgtagaatttt 31621731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 47
Target Start/End: Complemental strand, 32216125 - 32216088
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacca 47  Q
    ||||||||||||||||||||||||||||||||||||||    
T  32216125 ctcactacatttttgatgttatagtgttaacttcacca 32216088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 3535002 - 3534930
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| ||| |||||||||||||||||||||||||| | |||| | ||||| |||||||||| ||||||||||    
T  3535002 ctcacaacacttttgatgttatagtgttaacttcactagaaaattaattctaatgacttcataatagaatttt 3534930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 9903151 - 9903215
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttca-ccaaaaagtcattctcatga 64  Q
    ||||| || ||||||||| ||||||||||||||||||||||||| | ||||||||||| ||||||    
T  9903151 ggggtgttactcactacagttttgatgttatagtgttaacttcatcaaaaaagtcattttcatga 9903215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 81
Target Start/End: Original strand, 27227604 - 27227655
Alignment:
Q  31 tagtgttaacttcaccaaaaag-tcattctcatgacttcatcatagaatttt 81  Q
    |||||||||||||||||||||  ||||||||||||||||| |||||||||||    
T  27227604 tagtgttaacttcaccaaaaaaatcattctcatgacttcaccatagaatttt 27227655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 69
Target Start/End: Complemental strand, 37451351 - 37451296
Alignment:
Q  15 tacatttttgatgttatagtgttaacttcacc-aaaaagtcattctcatgacttca 69  Q
    |||||||||||||||||||||||||||| ||| ||||||||||| | |||||||||    
T  37451351 tacatttttgatgttatagtgttaactttaccaaaaaagtcatttttatgacttca 37451296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 22170814 - 22170752
Alignment:
Q  20 ttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    |||||||||||||||||||||||||  | |||||||||| |||||| |||| |||||||||||    
T  22170814 ttttgatgttatagtgttaacttcattagaaaagtcattttcatgatttcaccatagaatttt 22170752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 81
Target Start/End: Complemental strand, 39393459 - 39393381
Alignment:
Q  4 gtattgctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| ||||| ||| |||||||| ||||||||||||||||  | ||||||||||||||| |||||| | |||||||||    
T  39393459 gtattactcacaacacttttgatgctatagtgttaacttcattagaaaagtcattctcataacttcaccgtagaatttt 39393381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 21289716 - 21289675
Alignment:
Q  29 tatagtgttaacttcacca-aaaagtcattctcatgacttca 69  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  21289716 tatagtgttaacttcaccagaaaagtcattctcatgacttca 21289675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 51
Target Start/End: Original strand, 28564887 - 28564928
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcaccaaaaa 51  Q
    |||| |||||||||||||||||||||||||||||| ||||||    
T  28564887 ctcattacatttttgatgttatagtgttaacttcatcaaaaa 28564928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 42721118 - 42721037
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcaccaaaaag-tcattctcatgacttcatcatagaatttt 81  Q
    ||||| || ||||||| |||||| ||| ||||| | |||||||||||||||  ||||| ||||||||||| |||||||||||    
T  42721118 ggggtgttactcactatattttttatgatatagggctaacttcaccaaaaaaatcattttcatgacttcaccatagaatttt 42721037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 48620716 - 48620635
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| || ||||| ||| ||||||||||||| |||||||||||| | |||||||||| | || |||||| |||||||||||    
T  48620716 ggggtgttactcacaacacttttgatgttatattgttaacttcacaagaaaagtcattttaataacttcaacatagaatttt 48620635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 238618 - 238694
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacc-aaaaagtcattctcatgacttcatcatagaatttttctt 85  Q
    ||||| |||||||| ||  |||||||||||||||||| ||||||| ||| || ||||||||  ||||||||||||||    
T  238618 ctcacaacatttttaatactatagtgttaacttcaccaaaaaagttattttcgtgacttcactatagaatttttctt 238694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 23999409 - 23999345
Alignment:
Q  18 atttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    |||||| ||||| ||||||||||||||||| |||| ||||||| ||||||||| |||| ||||||    
T  23999409 attttttatgttgtagtgttaacttcaccaaaaaaatcattcttatgacttcaccataaaatttt 23999345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 81
Target Start/End: Original strand, 47682620 - 47682671
Alignment:
Q  31 tagtgttaacttcaccaaaaa-gtcattctcatgacttcatcatagaatttt 81  Q
    ||||||||||||||||||||| |||| ||||||||||||| |||| ||||||    
T  47682620 tagtgttaacttcaccaaaaaagtcactctcatgacttcaccataaaatttt 47682671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 81
Target Start/End: Complemental strand, 421424 - 421390
Alignment:
Q  47 aaaaagtcattctcatgacttcatcatagaatttt 81  Q
    |||||||||||||||| ||||||||||||||||||    
T  421424 aaaaagtcattctcataacttcatcatagaatttt 421390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 11742466 - 11742516
Alignment:
Q  20 ttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttca 69  Q
    |||||||  ||||||||||||||||||| ||||||||||||||| ||||||    
T  11742466 ttttgataatatagtgttaacttcaccagaaaagtcattctcataacttca 11742516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 83
Target Start/End: Original strand, 33725706 - 33725780
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttttc 83  Q
    |||| |||| |||||||| ||||| ||| ||||||| | ||||||||||||| |||||| | |||||||||||||    
T  33725706 ctcaatacacttttgatgatatagcgttgacttcactagaaaagtcattctcttgactttaccatagaatttttc 33725780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 43579290 - 43579244
Alignment:
Q  36 ttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    |||||||||| | |||||||||||||||||||||| |||||||||||    
T  43579290 ttaacttcactagaaaagtcattctcatgacttcaccatagaatttt 43579244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 69
Target Start/End: Original strand, 27267305 - 27267363
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacc-aaaaagtcattctcatgacttca 69  Q
    |||||||||||||| ||| ||  |||||||||||||| ||||| |||||||||||||||||    
T  27267305 ctcactacattttttatgcta--gtgttaacttcaccaaaaaaatcattctcatgacttca 27267363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 47279268 - 47279199
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttca 69  Q
    ||||| || ||||| ||| |||||||  |||| |||||||||||||| |||| |||||||||||||||||    
T  47279268 ggggtgttactcacaacacttttgatagtataatgttaacttcaccaaaaaaatcattctcatgacttca 47279199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 51128929 - 51128888
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcaccaaaaa 51  Q
    |||| ||||||||| ||||||||||||||||||||| |||||    
T  51128929 ctcattacattttttatgttatagtgttaacttcactaaaaa 51128888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 83
Target Start/End: Original strand, 27564011 - 27564086
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcac--caaaaagtcattctcatgacttcatcatagaatttttc 83  Q
    ||||||| |||||| | |||||||||||||||||||   ||||| ||||| |||| |||||| | |||||||||||    
T  27564011 ctcactatatttttaaagttatagtgttaacttcactaaaaaaaatcattttcataacttcaccgtagaatttttc 27564086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 4e-22; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 51213083 - 51213164
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacc-aaaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| ||||||| ||||||||| |||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  51213083 ggggtgttgctcattacattttttatgttacagtgttaacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 51213164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 81
Target Start/End: Original strand, 40552370 - 40552442
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacc-aaaaagtcattctcatgacttcatcatagaatttt 81  Q
    |||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||    
T  40552370 ctcattacatttttgatgttatagtgttaacttctccaaaaaagtcattctcatgacttcaccatagaatttt 40552442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 81
Target Start/End: Original strand, 46297873 - 46297945
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||    
T  46297873 ctcactatatttttgatgttatagtgttaacttcaccagaaaagtcattttcatgacttcaccatagaatttt 46297945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 35844391 - 35844319
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| ||||||||| |||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||    
T  35844391 ctcacaacatttttgttgttatagtgttaacttcaccagaaaagtcattatcatgacttcaccatagaatttt 35844319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 69
Target Start/End: Complemental strand, 44891571 - 44891512
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcaccaaaaagtcattctcatgacttca 69  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  44891571 ctcacaacacttttgatgttatagtgttaacttcaccaaaaagtcattttcatgacttca 44891512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 48355015 - 48354928
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttttcttgt 87  Q
    ||||| || |||| ||||||||| || |||||||||||||||||||| |||| ||||||||||||||||| ||||||||||| |||||    
T  48355015 ggggtgttactcattacatttttaatattatagtgttaacttcaccataaaaatcattctcatgacttcaccatagaattttccttgt 48354928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 37157782 - 37157701
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttca-ccaaaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| || ||||||||| ||||||||||||||||||||||||| | |||||| |||| ||||||||||| |||||||||||    
T  37157782 ggggtgttactcactacaattttgatgttatagtgttaacttcatcaaaaaagccattttcatgacttcaccatagaatttt 37157701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 4015525 - 4015453
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| ||| |||||||| |||||||||||||||| || |||||||||||||||||||||| |||||||||||    
T  4015525 ctcacaacacttttgatgctatagtgttaacttcatcagaaaagtcattctcatgacttcaccatagaatttt 4015453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 22451033 - 22450961
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||||||| |||||||| ||||||||| ||||||||| |||| ||||||||||||||||| |||||||||||    
T  22451033 ctcactacacttttgatgctatagtgttgacttcaccagaaaaatcattctcatgacttcaccatagaatttt 22450961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 10 - 69
Target Start/End: Original strand, 52041034 - 52041094
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttca 69  Q
    ||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  52041034 ctcactacacttttgatgttatagtattaacttcaccagaaaagtcattctcatgacttca 52041094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 27480500 - 27480562
Alignment:
Q  20 ttttgatgttatagtgttaacttcaccaaaaag-tcattctcatgacttcatcatagaatttt 81  Q
    |||||||||||||||||| |||| ||||||||  |||||||||||||||||||||||||||||    
T  27480500 ttttgatgttatagtgttgactttaccaaaaatatcattctcatgacttcatcatagaatttt 27480562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 29099429 - 29099360
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttca 69  Q
    ||||| || ||||| |||||||| ||||||||||||||||||||||| |||||||||||| |||||||||    
T  29099429 ggggtgttactcacgacattttttatgttatagtgttaacttcaccagaaaagtcattctaatgacttca 29099360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 37203141 - 37203060
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttca-ccaaaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| || ||||||||| ||||||||||||||||||||||||| | ||||| ||||| | ||||||||| |||||||||||    
T  37203141 ggggtgttactcactacaattttgatgttatagtgttaacttcatcaaaaaaatcatttttatgacttcaccatagaatttt 37203060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 86
Target Start/End: Original strand, 43975999 - 43976073
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcaccaaaaagtcattctcatgacttcatcatagaatttttcttg 86  Q
    ||||||||| |||||||| ||||||||| ||||||  ||||||||||||||||||||||| |||| |||||| ||||    
T  43975999 ctcactacacttttgatgctatagtgttgacttca--aaaaagtcattctcatgacttcaccataaaattttacttg 43976073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 44186603 - 44186684
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacc-aaaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| || ||||| ||| |||||||| |||||||||||||||||| ||||| ||||||||  |||||||||||||||||||    
T  44186603 ggggtgttactcacaacacttttgatgctatagtgttaacttcaccaaaaaaatcattctctcgacttcatcatagaatttt 44186684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 47481596 - 47481515
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcaccaaaaa-gtcattctcatgacttcatcatagaatttt 81  Q
    ||||| || |||| |||||||||||||||||||||||||||||||||||||  ||||||  ||||||||| |||| ||||||    
T  47481596 ggggtgttactcattacatttttgatgttatagtgttaacttcaccaaaaacatcattcctatgacttcaccataaaatttt 47481515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 54505882 - 54505801
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttc-accaaaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| || |||| ||||||||||||||||||||||||||||| || |||||||||||||   |||||||||||| ||||||    
T  54505882 ggggtgttactcattacatttttgatgttatagtgttaacttcaacaaaaaagtcattcttgcgacttcatcataaaatttt 54505801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 11357467 - 11357535
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttc 68  Q
    ||||| || ||||||| | |||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  11357467 ggggtgttactcactatacttttgatgctatagtgttaacttcaccagaaaagtcattctcatgacttc 11357535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 87
Target Start/End: Original strand, 4761760 - 4761840
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacc---aaaaagtcattctcatgacttcatcatagaatttttcttgt 87  Q
    |||| |||||||||||| ||||||| |||||||||||   ||||||||| |||||||| |||| ||||||||||| |||||    
T  4761760 ctcattacatttttgatattatagtattaacttcaccaaaaaaaagtcaatctcatgaattcaccatagaattttccttgt 4761840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 22446166 - 22446247
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacc--aaaaagtcattctcatgacttcatcatagaattt 80  Q
    ||||| || ||||||| |||||||||| |||| |||||||||||||  ||||||||||| ||||||||||| | ||||||||    
T  22446166 ggggtgttactcactatatttttgatgatataatgttaacttcaccaaaaaaagtcattttcatgacttcaccgtagaattt 22446247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 26941381 - 26941443
Alignment:
Q  20 ttttgatgttatagtgttaacttcacc-aaaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||||| ||||||||||||||||||| ||||| ||||||| ||||||||| |||||||||||    
T  26941381 ttttgattttatagtgttaacttcaccaaaaaaatcattcttatgacttcaccatagaatttt 26941443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 33698262 - 33698185
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcaccaaaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| || ||||| |||||||||||||||||||||||||||||| | | |   ||||||||||||||| |||||||||||    
T  33698262 ggggtgttactcacaacatttttgatgttatagtgttaacttcactagaga---attctcatgacttcaccatagaatttt 33698185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 81
Target Start/End: Original strand, 7327593 - 7327666
Alignment:
Q  10 ctcactacatttttgatgttatagtgtt-aacttcaccaaaa-agtcattctcatgacttcatcatagaatttt 81  Q
    ||||| ||| |||||||||||||||||| |||||||| |||| |||||||||||| |||||| |||||||||||    
T  7327593 ctcacaacacttttgatgttatagtgtttaacttcactaaaaaagtcattctcataacttcaccatagaatttt 7327666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 34133009 - 34132928
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| || ||||| |||||||||||  ||||||||||| ||||||| |||||||||| || ||||||||| ||||||||||    
T  34133009 ggggtgttactcacaacatttttgatactatagtgttaatttcaccaaaaaagtcattttcgtgacttcattatagaatttt 34132928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 81
Target Start/End: Original strand, 11835737 - 11835789
Alignment:
Q  30 atagtgttaacttcaccaaaaag-tcattctcatgacttcatcatagaatttt 81  Q
    ||||||||||||||||||||||  ||||||||||||||||| |||||||||||    
T  11835737 atagtgttaacttcaccaaaaaaatcattctcatgacttcaccatagaatttt 11835789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 85
Target Start/End: Original strand, 53229256 - 53229340
Alignment:
Q  2 gggtattgctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttttctt 85  Q
    |||| |||||||||||| |||||||| ||||||||||| ||||||| |||| | ||| ||||||||||| | || ||||||||||    
T  53229256 gggtgttgctcactacacttttgatgctatagtgttaatttcaccagaaaaataattttcatgacttcaccttaaaatttttctt 53229340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 55343403 - 55343467
Alignment:
Q  18 atttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||||||| ||||||||||||||||| || |||||||||| || |||||||| |||||||||||    
T  55343403 atttttgatattatagtgttaacttcatcagaaaagtcattttcgtgacttcaccatagaatttt 55343467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 69
Target Start/End: Original strand, 20373412 - 20373467
Alignment:
Q  15 tacatttttgatgttatagtgttaacttcacc-aaaaagtcattctcatgacttca 69  Q
    |||||||||||||||||||| ||||||||||| ||||| ||||||| |||||||||    
T  20373412 tacatttttgatgttatagtattaacttcaccaaaaaaatcattcttatgacttca 20373467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 32373537 - 32373466
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaattt 80  Q
    ||||| ||| |||||||| |||||||||||||| |    |||||||||||||||||||||||||||||||||    
T  32373537 ctcacaacacttttgatgctatagtgttaactttattggaaaagtcattctcatgacttcatcatagaattt 32373466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 11466875 - 11466817
Alignment:
Q  24 gatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||||||||| ||||||||| || |||||||||||||| ||||||| |||||||||||    
T  11466875 gatgttatagtcttaacttcatcagaaaagtcattctcaagacttcaccatagaatttt 11466817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 21193649 - 21193599
Alignment:
Q  32 agtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    |||||||||||||||| |||||||||||||||||||| | |||||||||||    
T  21193649 agtgttaacttcaccagaaaagtcattctcatgactttaccatagaatttt 21193599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 40640634 - 40640680
Alignment:
Q  36 ttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    |||||||||||| |||||||||||||||||||||| |||||||||||    
T  40640634 ttaacttcaccagaaaagtcattctcatgacttcaccatagaatttt 40640680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 40936046 - 40935996
Alignment:
Q  20 ttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttca 69  Q
    |||||||| ||||||||||||||||||| |||| |||||||||||||||||    
T  40936046 ttttgatgctatagtgttaacttcaccagaaaaatcattctcatgacttca 40935996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 45174558 - 45174496
Alignment:
Q  20 ttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    |||||||||||||||||||||||||||| |||||| |||||||  |||||| |||| ||||||    
T  45174558 ttttgatgttatagtgttaacttcaccaaaaaagttattctcacaacttcaccataaaatttt 45174496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 3655304 - 3655385
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttca-ccaaaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| || |||| ||||||||| |||||||||||||||||| | | ||||||||||| | ||||||||| |||| ||||||    
T  3655304 ggggtgttactcattacattttttatgttatagtgttaactttatcaaaaaagtcatttttatgacttcaccataaaatttt 3655385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 39282726 - 39282646
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    |||||||| ||||| ||| |||||||||||||||||||| || | || |||| ||||| ||||||||||| |||||||||||    
T  39282726 ggggtattactcac-acagttttgatgttatagtgttaattttatcagaaaaatcattttcatgacttcaccatagaatttt 39282646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 45879498 - 45879544
Alignment:
Q  36 ttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||||| |||| |||||||||||||||||||||| |||||||||||    
T  45879498 ttaactttaccagaaaagtcattctcatgacttcagcatagaatttt 45879544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 46994771 - 46994833
Alignment:
Q  20 ttttgatgttatagtgttaacttcacc-aaaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||||||||||||| ||||||||||| ||||| ||||||| | ||||||| | |||||||||    
T  46994771 ttttgatgttatagtattaacttcaccaaaaaaatcattcttacgacttcaccgtagaatttt 46994833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 2613955 - 2613894
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttc-accaaaaagtcattctcatgacttcat 70  Q
    ||||| ||| ||||| |||||||||||||||||| || ||||||||||| | ||||||||||    
T  2613955 ctcacaacacttttggtgttatagtgttaacttcaacaaaaaagtcattttaatgacttcat 2613894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 3362318 - 3362277
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcaccaaaaa 51  Q
    ||||||| |||| ||||| |||||||||||||||||||||||    
T  3362318 ctcactatatttctgatgctatagtgttaacttcaccaaaaa 3362277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 33378887 - 33378965
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcaccaaaaagtcattctcatgacttcatcatagaatttt 81  Q
    |||||| | ||||||||| |||||||  ||||||||| |||||||  ||||||||||||||| ||||   |||||||||||    
T  33378887 ggggtactactcactacacttttgatactatagtgttgacttcac--aaaagtcattctcataactttgccatagaatttt 33378965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 38392628 - 38392673
Alignment:
Q  36 ttaacttcaccaaaa-agtcattctcatgacttcatcatagaattt 80  Q
    ||||||||||||||| ||||||||||||||||||| |||| |||||    
T  38392628 ttaacttcaccaaaaaagtcattctcatgacttcaccatataattt 38392673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 84
Target Start/End: Original strand, 53818509 - 53818558
Alignment:
Q  36 ttaacttcacca-aaaagtcattctcatgacttcatcatagaatttttct 84  Q
    |||||||||||| |||| ||||||||||||||||| |||| |||||||||    
T  53818509 ttaacttcaccagaaaaatcattctcatgacttcaccataaaatttttct 53818558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 54828803 - 54828887
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacc-aaaaagtcattctcatgacttcatcatagaatttttctt 85  Q
    ||||| || |||| ||||||||| |||||||||||||||||| ||| ||||| | ||| | ||||||||| |||| ||||||||||    
T  54828803 ggggtgttactcattacattttt-atgttatagtgttaactttaccaaaaaaattatttttatgacttcaccataaaatttttctt 54828887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 2e-21; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 81
Target Start/End: Original strand, 14409427 - 14409499
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    |||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||| |||||||||||    
T  14409427 ctcactacatttttgatgttatagtgttgacttcaccagaaaaatcattctcatgacttcaccatagaatttt 14409499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 26317793 - 26317857
Alignment:
Q  18 atttttgatgttatagtgttaacttcacc-aaaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  26317793 atttttgatgttatagtgttaacttcaccaaaaaagtcattttcatgacttcatcatagaatttt 26317857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 8741979 - 8742060
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| || ||||| ||| |||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  8741979 ggggtgttactcacaacacttttgatgctatagtgttaacttcaccagaaaagtcattctcatgacttcaccatagaatttt 8742060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 81
Target Start/End: Complemental strand, 8466818 - 8466747
Alignment:
Q  11 tcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    |||| ||| ||||||||||| |||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  8466818 tcacaacacttttgatgttacagtgttaacttcaccagaaaagtcattctcatgacctcatcatagaatttt 8466747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 12 - 81
Target Start/End: Complemental strand, 12910422 - 12910352
Alignment:
Q  12 cactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| ||||||||||||||||| |||||||||||| |||||||||| ||||||||||| |||||||||||    
T  12910422 cactatatttttgatgttatagttttaacttcaccaaaaaagtcattttcatgacttcaccatagaatttt 12910352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 15724554 - 15724492
Alignment:
Q  20 ttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||    
T  15724554 ttttgatgttatagtgttaacttcaccaaaaaagtcattctcataacttcaccatagaatttt 15724492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 81
Target Start/End: Original strand, 16004472 - 16004550
Alignment:
Q  5 tattgctcactacatttttgatgttatagtgttaacttcacca-aaaagtc-attctcatgacttcatcatagaatttt 81  Q
    |||| ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| | |||||||||||    
T  16004472 tattactcacaacatttttgatgttatagtgttaacttcaccagaaaagtcaattctcatgactttaccatagaatttt 16004550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 19119923 - 19119861
Alignment:
Q  20 ttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  19119923 ttttgatgctatagtgttaacttcaccacaaaagtcattctcatgacttcaccatagaatttt 19119861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 84
Target Start/End: Original strand, 25501028 - 25501102
Alignment:
Q  11 tcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttttct 84  Q
    |||| ||| |||||||| |||||||||||||| |||| |||||||||||||||||||||| ||||||||||||||    
T  25501028 tcacaacacttttgatgctatagtgttaactttaccagaaaagtcattctcatgacttcaccatagaatttttct 25501102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 10 - 87
Target Start/End: Original strand, 35826584 - 35826662
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcac-caaaaagtcattctcatgacttcatcatagaatttttcttgt 87  Q
    |||| |||||||||||||||||||| ||||||||||  ||||||||||| ||||||||||| ||||||||||| |||||    
T  35826584 ctcagtacatttttgatgttatagtattaacttcacaaaaaaagtcattatcatgacttcaccatagaattttccttgt 35826662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 1429237 - 1429318
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcaccaaaa-agtcattctcatgacttcatcatagaatttt 81  Q
    ||||| || ||||||| |||||||||| |||||||||||||||||||||| ||||||| ||||||||||| |||||| ||||    
T  1429237 ggggtgttactcactatatttttgatgctatagtgttaacttcaccaaaagagtcattttcatgacttcaccatagattttt 1429318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 5112405 - 5112494
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacc-aaaaagtcattctcatgacttcatcatagaatttttcttgtat 89  Q
    ||||| || ||||||| |||||| |||||||||| ||||||||||| ||||||||||| ||||||||||| |||| |||||| |||||||    
T  5112405 ggggtgttactcactatattttttatgttatagtattaacttcaccaaaaaagtcattttcatgacttcaccataaaattttccttgtat 5112494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 22980876 - 22980795
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    |||||||| ||||||  |||||||||  ||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||    
T  22980876 ggggtattactcactgtatttttgatactatagtgttaacttcaccagaaaagtcattctcataacttcatcataaaatttt 22980795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 7693304 - 7693232
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| ||| |||||||||||||||||||||||||||| |||||||||| | ||||||||| |||||||||||    
T  7693304 ctcacaacacttttgatgttatagtgttaacttcaccagaaaagtcattttaatgacttcaccatagaatttt 7693232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 10 - 81
Target Start/End: Original strand, 22974183 - 22974255
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacc-aaaaagtcattctcatgacttcatcatagaatttt 81  Q
    |||| ||| |||||||||||||||||||||||||||| ||||| |||||||||| |||||| |||||||||||    
T  22974183 ctcattacttttttgatgttatagtgttaacttcaccaaaaaaatcattctcataacttcaccatagaatttt 22974255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 15 - 81
Target Start/End: Original strand, 31705717 - 31705784
Alignment:
Q  15 tacatttttgatgttatagtgttaacttcacc-aaaaagtcattctcatgacttcatcatagaatttt 81  Q
    |||||||||||||||||||||||||||||||| ||||| ||||| | ||||||||| |||||||||||    
T  31705717 tacatttttgatgttatagtgttaacttcaccaaaaaaatcatttttatgacttcaccatagaatttt 31705784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 83
Target Start/End: Original strand, 27318588 - 27318662
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttttc 83  Q
    |||||||||||||| ||||| ||||||||||||||||| |||| ||||||||||||||||| | | |||||||||    
T  27318588 ctcactacattttttatgttttagtgttaacttcaccagaaaaatcattctcatgacttcaccgttgaatttttc 27318662  T

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Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 27330370 - 27330308
Alignment:
Q  20 ttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    |||||||||||||||||||||||||||| ||||||||||| || ||||||| |||||||||||    
T  27330370 ttttgatgttatagtgttaacttcaccagaaaagtcattcccacgacttcaccatagaatttt 27330308  T

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Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 31786745 - 31786819
Alignment:
Q  8 tgctcactacatttttgatgttatagtgttaacttcacc-aaaaagtcattctcatgacttcatcatagaatttt 81  Q
    |||||||||||||||| ||| |||||||||||||||||| |||||||||||||||  ||||||  ||||||||||    
T  31786745 tgctcactacatttttcatgctatagtgttaacttcaccaaaaaagtcattctcactacttcactatagaatttt 31786819  T

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Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 24886187 - 24886104
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacca---aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| || |||| |||||||||||||||||||| ||||||||||||   ||||||||||||||||| |||| |||| ||||||    
T  24886187 ggggtgttactcattacatttttgatgttatagtattaacttcaccaaaaaaaagtcattctcatgatttcaccataaaatttt 24886104  T

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Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 30969416 - 30969497
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| || ||||| ||| |||||||||||||||||||||||||||| | || ||||||||||||||||||  |||||||||    
T  30969416 ggggtgttactcacaacacttttgatgttatagtgttaacttcaccagataaatcattctcatgacttcattgtagaatttt 30969497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 81
Target Start/End: Original strand, 13956446 - 13956518
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||||||| |||||||||||||||||||||||||  | |||||||||| ||||||||||| | |||||||||    
T  13956446 ctcactacagttttgatgttatagtgttaacttcatgagaaaagtcattttcatgacttcaccgtagaatttt 13956518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 699233 - 699150
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttttc 83  Q
    ||||| || ||||||| |||||| ||| |||||||||||||||| || ||||||||||||||| |||||| |||| ||||||||    
T  699233 ggggtgttactcactagattttttatgctatagtgttaacttcatcagaaaagtcattctcataacttcaccataaaatttttc 699150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 5837638 - 5837555
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttttc 83  Q
    ||||| || ||||| ||| |||||||| |||||||||| |||||||| ||||||||||||||||| |||| | |||||||||||    
T  5837638 ggggtgttactcacaacacttttgatgctatagtgttaccttcaccagaaaagtcattctcatgaattcaccgtagaatttttc 5837555  T

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Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 38528328 - 38528414
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttttcttg 86  Q
    ||||| || |||| |||| ||||||||||||||||||||||||| || ||||  |||| ||||||||||| ||||||||||| ||||    
T  38528328 ggggtgttactcattacaattttgatgttatagtgttaacttcatcagaaaaaccattttcatgacttcaccatagaattttccttg 38528414  T

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Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 9200316 - 9200235
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| || ||||| ||| |||||||||||||||||||||||||||| |||||| ||| | ||||||||| |||| ||||||    
T  9200316 ggggtgttactcacaacacttttgatgttatagtgttaacttcaccagaaaagttattttaatgacttcaccataaaatttt 9200235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 36866845 - 36866764
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| || ||||| | ||||||||| |||||||||||||||||||| |||| ||||| || |||||||| |||||||||||    
T  36866845 ggggtgttactcacaatatttttgatattatagtgttaacttcaccagaaaaatcattttcgtgacttcaccatagaatttt 36866764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 40133468 - 40133387
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| || ||||| |||||||||||  |||| |||||||||||||| |||||||||| || |||||||| |||||||||||    
T  40133468 ggggtgttactcacaacatttttgatactataatgttaacttcaccacaaaagtcattttcgtgacttcaccatagaatttt 40133387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 81
Target Start/End: Original strand, 23116323 - 23116395
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttca-ccaaaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||||||| ||||||||||||| |||||||||||   ||||||||||| ||||||| ||| |||||||||||    
T  23116323 ctcactacagttttgatgttataatgttaacttcataaaaaaagtcattttcatgacgtcaccatagaatttt 23116395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 32563223 - 32563151
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| ||| ||||||||||||||||||||||||| || |||| ||||| | ||||||||| |||||||||||    
T  32563223 ctcacaacacttttgatgttatagtgttaacttcatcagaaaaatcattttaatgacttcaccatagaatttt 32563151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 69
Target Start/End: Complemental strand, 33908307 - 33908247
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcaccaaaaagt-cattctcatgacttca 69  Q
    ||||||||| |||||||| ||||||||| ||||||||| ||||| ||||||||||||||||    
T  33908307 ctcactacacttttgatgatatagtgttgacttcaccagaaagttcattctcatgacttca 33908247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 39572893 - 39572821
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| |||||||| || ||||||| ||||||| || | |||||||||||||||||||||| |||||||||||    
T  39572893 ctcacaacattttttatattatagtattaacttaactagaaaagtcattctcatgacttcaccatagaatttt 39572821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 22255658 - 22255607
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcaccaaaaag 52  Q
    ||||| || |||| |||||||||||||||||||||||||||||| |||||||    
T  22255658 ggggtgttactcattacatttttgatgttatagtgttaacttcatcaaaaag 22255607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 82
Target Start/End: Complemental strand, 26268138 - 26268075
Alignment:
Q  20 ttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaattttt 82  Q
    |||||||| ||||||||||||||||||| |||| |||||||||||||||||   ||||||||||    
T  26268138 ttttgatgctatagtgttaacttcaccagaaaaatcattctcatgacttcactgtagaattttt 26268075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 81
Target Start/End: Original strand, 14919629 - 14919702
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacc--aaaaagtcattctcatgacttcatcatagaatttt 81  Q
    |||| |||||||||||||||||| ||||||||||| |  ||||| | ||||||||||||||| |||| ||||||    
T  14919629 ctcattacatttttgatgttataatgttaacttcatcaaaaaaaataattctcatgacttcaccatataatttt 14919702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 74
Target Start/End: Original strand, 43308757 - 43308818
Alignment:
Q  15 tacatttttgatgttatagtgttaacttcac--caaaaagtcattctcatgacttcatcata 74  Q
    |||||||||||||||||| ||||||||| ||   ||||||||||||||||||||||| ||||    
T  43308757 tacatttttgatgttataatgttaactttactaaaaaaagtcattctcatgacttcaccata 43308818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 36860506 - 36860425
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| || ||||| |||||||| ||  ||||||||||||||||||| |||| ||||| || |||||||| |||||||||||    
T  36860506 ggggtgttactcacaacattttttatactatagtgttaacttcaccagaaaaatcattttcgtgacttcaccatagaatttt 36860425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 81
Target Start/End: Original strand, 35511578 - 35511650
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||||||| | ||||||||||| ||||||||||| || ||| |||||| ||||||||||| ||||| |||||    
T  35511578 ctcactacagtgttgatgttataatgttaacttcatcagaaacgtcattttcatgacttcaccataggatttt 35511650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 35933976 - 35933904
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcaccaaaaag-tcattctcatgacttcatcatagaatttt 81  Q
    ||||| ||| |||||||  |||||||||||||||| ||||||  ||||||||||||||||| |||| ||||||    
T  35933976 ctcacaacacttttgattctatagtgttaacttcatcaaaaaaatcattctcatgacttcaccatacaatttt 35933904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 81
Target Start/End: Original strand, 17158131 - 17158206
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcac----caaaaagtcattctcatgacttcatcatagaatttt 81  Q
    |||| ||||||||| |||||||||||||||||||||     ||||| ||||| | ||||||||| |||||||||||    
T  17158131 ctcattacattttttatgttatagtgttaacttcacaaaaaaaaaaatcatttttatgacttcaccatagaatttt 17158206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 22616542 - 22616496
Alignment:
Q  36 ttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    |||||||||||| |||||||||| ||||||||||| |||||||||||    
T  22616542 ttaacttcaccagaaaagtcattttcatgacttcaccatagaatttt 22616496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 74
Target Start/End: Complemental strand, 5748478 - 5748437
Alignment:
Q  34 tgttaacttcaccaaaaa-gtcattctcatgacttcatcata 74  Q
    |||||||||||||||||| |||||| ||||||||||||||||    
T  5748478 tgttaacttcaccaaaaaagtcattttcatgacttcatcata 5748437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 22019715 - 22019638
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaa 77  Q
    ||||| || ||||| ||| |||||||  |||||| |||||||||||| |||||||||||| || |||||| |||||||    
T  22019715 ggggtgttactcacaacacttttgattctatagttttaacttcaccagaaaagtcattctaataacttcaccatagaa 22019638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 42342816 - 42342775
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaactt 42  Q
    |||||||| ||||| ||||||||||||||||||| |||||||    
T  42342816 ggggtattactcacaacatttttgatgttatagtattaactt 42342775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 82
Target Start/End: Original strand, 7208971 - 7209038
Alignment:
Q  17 catttttgatgttatagtgttaacttcacc--aaaaagtcattctcatgacttcatcatagaattttt 82  Q
    ||||||| |||||| | |||||||||||||  ||||||||||| | ||||||||| | ||||||||||    
T  7208971 cattttttatgttacaatgttaacttcaccaaaaaaagtcatttttatgacttcaccgtagaattttt 7209038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 69
Target Start/End: Complemental strand, 8437040 - 8436980
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttca 69  Q
    ||||||||| ||| || | ||||||||||| ||||||| |||| |||||||||||||||||    
T  8437040 ctcactacactttggaagctatagtgttaatttcaccaaaaaaatcattctcatgacttca 8436980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 22255246 - 22255214
Alignment:
Q  19 tttttgatgttatagtgttaacttcaccaaaaa 51  Q
    |||||||||||||| ||||||||||||||||||    
T  22255246 tttttgatgttataatgttaacttcaccaaaaa 22255214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 28416638 - 28416695
Alignment:
Q  20 ttttgatgttatagtgttaacttcaccaaaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||||| |||||||||||||||||| ||    ||||||| ||||||||| |||||||||||    
T  28416638 ttttgatattatagtgttaacttcactaa----tcattctaatgacttcaccatagaatttt 28416695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 2e-20; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 4318943 - 4319005
Alignment:
Q  20 ttttgatgttatagtgttaacttcacc-aaaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  4318943 ttttgatgttatagtgttaacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 4319005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 8513316 - 8513235
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| || ||||| ||| ||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  8513316 ggggtgttactcacaacacttttgatattatagtgttaacttcaccagaaaagtcattctcatgacttcaccatagaatttt 8513235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 20768160 - 20768088
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||||||| |||||||| ||||||||| ||||||||| |||||||||||||||||||||| |||||||||||    
T  20768160 ctcactacacttttgatgctatagtgttgacttcaccagaaaagtcattctcatgacttcaccatagaatttt 20768088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 30353478 - 30353542
Alignment:
Q  20 ttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttttc 83  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  30353478 ttttgatgttataatgttaacttcaccagaaaagtcattctcatgacttcaccatagaatttttc 30353542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 1945917 - 1945835
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacca--aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| || |||| |||||||||||||||||||||||||||||||||  |||||||||||| ||||||||| | |||||||||    
T  1945917 ggggtgttactcattacatttttgatgttatagtgttaacttcaccaaaaaaagtcattcttatgacttcaccgtagaatttt 1945835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 29182246 - 29182161
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcaccaa-aaagtcattctcatgacttcatcatagaatttttctt 85  Q
    ||||| || ||||| ||| ||||||||||||||||||||||||| ||| ||| ||||||||||||||||| |||| ||||||||||    
T  29182246 ggggtgttactcacaacacttttgatgttatagtgttaacttcatcaataaaatcattctcatgacttcaccataaaatttttctt 29182161  T

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Target: chr6; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 10 - 81
Target Start/End: Original strand, 7235144 - 7235216
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacc-aaaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||||||| |||||||||||||||||| ||||||||  ||||||||||||||| |||||| |||||||||||    
T  7235144 ctcactacacttttgatgttatagtgttgacttcaccggaaaagtcattctcataacttcaccatagaatttt 7235216  T

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Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 83
Target Start/End: Complemental strand, 6088982 - 6088908
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttttc 83  Q
    ||||| ||| |||||||  ||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||    
T  6088982 ctcacaacacttttgatactatagtgttaacttcaccagaaaaatcattctcatgacttcaccatagaatttttc 6088908  T

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Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 5627474 - 5627393
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| || |||| || |||||| ||||||||||||||||||||||| |||||||||||| ||||||||| | |||||||||    
T  5627474 ggggtgttactcattatattttttatgttatagtgttaacttcaccaaaaaagtcattcttatgacttcaccttagaatttt 5627393  T

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Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 18498516 - 18498447
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttca 69  Q
    ||||| |||||||||||| |||||||| |||| ||||||||||||||  |||||||||||||||||||||    
T  18498516 ggggtgttgctcactacacttttgatgctataatgttaacttcaccaggaaagtcattctcatgacttca 18498447  T

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Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 81
Target Start/End: Original strand, 3880049 - 3880121
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| ||| |||||||  |||| |||||||||||||| ||||||||||||| |||||||| |||||||||||    
T  3880049 ctcacaacacttttgatactataatgttaacttcaccagaaaagtcattctcgtgacttcaccatagaatttt 3880121  T

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Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 7055333 - 7055397
Alignment:
Q  18 atttttgatgttatagtgttaacttcacc-aaaaagtcattctcatgacttcatcatagaatttt 81  Q
    |||||| |||||||||||||||||||||| ||||| ||||||| ||||||||| |||| ||||||    
T  7055333 attttttatgttatagtgttaacttcaccaaaaaaatcattcttatgacttcaccataaaatttt 7055397  T

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Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 89
Target Start/End: Complemental strand, 19631797 - 19631743
Alignment:
Q  36 ttaacttcacca-aaaagtcattctcatgacttcatcatagaatttttcttgtat 89  Q
    |||||||||||| |||||||||||| ||||||||| ||||||||||| |||||||    
T  19631797 ttaacttcaccagaaaagtcattcttatgacttcaccatagaattttccttgtat 19631743  T

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Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 33893103 - 33893184
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcac-caaaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| || ||||| ||| ||||||||||||||||||||||||||  ||||| | ||||| ||||||| | |||||||||||    
T  33893103 ggggtgttactcacaacacttttgatgttatagtgttaacttcactaaaaaaattattctaatgactttaccatagaatttt 33893184  T

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Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 81
Target Start/End: Original strand, 3005405 - 3005439
Alignment:
Q  47 aaaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||||||||||||||||||||| |||||||||||    
T  3005405 aaaaagtcattctcatgacttcaacatagaatttt 3005439  T

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Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 21017213 - 21017306
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcaccaaaa-agtcattctcatgacttcatcatagaatttttcttgtatttat 93  Q
    ||||| || ||||| |||||||| ||  || | ||||||||||||||||| ||||||| || |||||||| | || |||||||||||| |||||    
T  21017213 ggggtgttactcacaacattttttatactacaatgttaacttcaccaaaaaagtcattttcgtgacttcaccgtataatttttcttgtttttat 21017306  T

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Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 84
Target Start/End: Complemental strand, 30338512 - 30338475
Alignment:
Q  47 aaaaagtcattctcatgacttcatcatagaatttttct 84  Q
    |||||||||||||||  |||||||||||||||||||||    
T  30338512 aaaaagtcattctcacaacttcatcatagaatttttct 30338475  T

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Target: scaffold0009 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 91
Target Start/End: Complemental strand, 100894 - 100813
Alignment:
Q  11 tcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttttcttgtattt 91  Q
    ||||||| ||||||||||||||| ||||||||||||| |||| ||||||||||||||||| ||||||||||| ||| |||||    
T  100894 tcactacgtttttgatgttatagcgttaacttcaccaaaaaaatcattctcatgacttcaccatagaattttccttttattt 100813  T

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Target: scaffold0009; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 42431 - 42350
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| || ||||| ||| |||||||||||||||||||||||||||| |||| | ||||||||||||||| |||| ||||||    
T  42431 ggggtgttactcacaacacttttgatgttatagtgttaacttcaccagaaaaattattctcatgacttcaccataaaatttt 42350  T

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Target: scaffold0291 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 7970 - 7885
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttca-ccaaaaagtcattctcatgacttcatcatagaatttttctt 85  Q
    ||||| || |||| |||| ||||||||||||||||||||||||| | ||||||||||||| || |||||| |||||||||||||||    
T  7970 ggggtgttactcattacaattttgatgttatagtgttaacttcatcaaaaaagtcattcttataacttcaccatagaatttttctt 7885  T

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Target: scaffold0061 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 44040 - 43957
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttttc 83  Q
    ||||| || |||| |||||||||||| |||||| ||||||||||||| ||||||| |||| | ||||||| |||||||||||||    
T  44040 ggggtgttactcattacatttttgatattatagcgttaacttcaccaaaaaagtctttcttacgacttcaccatagaatttttc 43957  T

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Target: scaffold0017 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 154747 - 154830
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacc-aaaaagtcattctcatgacttcatcatagaatttttc 83  Q
    ||||| || |||| |||||||||||| |||||| |||||||||||| |||||||| |||| | ||||||| |||||||||||||    
T  154747 ggggtgttactcattacatttttgatattatagcgttaacttcaccaaaaaagtctttcttacgacttcaccatagaatttttc 154830  T

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Target: scaffold0318 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 11990 - 11906
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacca-aaaagtcatt-ctcatgacttcatcatagaatttttc 83  Q
    ||||| || ||||| ||| |||| ||||||| ||||||| ||||||| |||||||||| |||||||||||| |||||||||||||    
T  11990 ggggtgttactcacaacacttttaatgttatggtgttaatttcaccagaaaagtcatttctcatgacttcaccatagaatttttc 11906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 12137 - 12184
Alignment:
Q  35 gttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  12137 gttaacttcaccagaaaagtcattctcataacttcatcatagaatttt 12184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 146118 - 146201
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcaccaaaaag-tcattctcatgacttcatcatagaatttttc 83  Q
    ||||| || |||| ||||||||| |||||||| ||||||||| ||||||||  ||||||| ||||||||| | |||||||||||    
T  146118 ggggtgttactcattacattttttatgttataatgttaacttaaccaaaaaaatcattcttatgacttcaccgtagaatttttc 146201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 208 - 136
Alignment:
Q  10 ctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcatgacttcatcatagaatttt 81  Q
    ||||| |||||||| ||  || |||||||||||||||| |||||||||| || |||||||| |||||||||||    
T  208 ctcacaacattttttatactacagtgttaacttcaccagaaaagtcattttcgtgacttcaccatagaatttt 136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 94485 - 94547
Alignment:
Q  1 ggggtattgctcactacatttttgatgttatagtgttaacttcacca-aaaagtcattctcat 62  Q
    ||||| || ||||||||| ||||||||||||| ||||||||||| || |||||||||| ||||    
T  94485 ggggtgttactcactacaattttgatgttataatgttaacttcatcagaaaagtcattttcat 94547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0312 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 81
Target Start/End: Original strand, 9147 - 9181
Alignment:
Q  47 aaaaagtcattctcatgacttcatcatagaatttt 81  Q
    |||||||||||||||| ||||||||||||||||||    
T  9147 aaaaagtcattctcataacttcatcatagaatttt 9181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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