View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1531_1D_low_58 (Length: 207)

Name: NF1531_1D_low_58
Description: NF1531_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1531_1D_low_58
NF1531_1D_low_58
[»] chr4 (30 HSPs)
chr4 (1-187)||(6624190-6624376)
chr4 (8-179)||(6649083-6649254)
chr4 (14-179)||(6750875-6751040)
chr4 (13-179)||(6535425-6535591)
chr4 (1-179)||(6713839-6714017)
chr4 (8-179)||(6725958-6726129)
chr4 (13-185)||(6794466-6794638)
chr4 (13-179)||(6589810-6589976)
chr4 (13-179)||(6756493-6756659)
chr4 (1-179)||(6672683-6672862)
chr4 (16-182)||(6813799-6813965)
chr4 (14-179)||(6500122-6500287)
chr4 (24-182)||(6834199-6834357)
chr4 (8-179)||(6547671-6547842)
chr4 (21-184)||(4126231-4126394)
chr4 (21-131)||(4343040-4343150)
chr4 (21-179)||(4358460-4358618)
chr4 (24-128)||(4351330-4351434)
chr4 (21-134)||(4322896-4323009)
chr4 (1-94)||(4925774-4925867)
chr4 (26-137)||(6811811-6811922)
chr4 (21-127)||(4333654-4333760)
chr4 (14-72)||(8412955-8413013)
chr4 (15-93)||(4925690-4925769)
chr4 (31-137)||(6503545-6503651)
chr4 (129-177)||(8412893-8412941)
chr4 (31-106)||(6502294-6502369)
chr4 (26-137)||(6832329-6832440)
chr4 (24-122)||(25568099-25568197)
chr4 (27-119)||(7888546-7888638)
[»] scaffold0373 (1 HSPs)
scaffold0373 (13-185)||(11665-11837)
[»] scaffold0294 (1 HSPs)
scaffold0294 (34-134)||(10475-10575)
[»] chr6 (17 HSPs)
chr6 (26-122)||(5094148-5094244)
chr6 (26-105)||(5068873-5068952)
chr6 (38-127)||(5348513-5348602)
chr6 (26-122)||(5423860-5423956)
chr6 (21-127)||(5104666-5104772)
chr6 (26-105)||(5159300-5159379)
chr6 (21-127)||(5075525-5075631)
chr6 (34-176)||(5183759-5183901)
chr6 (31-105)||(5368584-5368658)
chr6 (21-134)||(5148753-5148866)
chr6 (21-134)||(5445178-5445291)
chr6 (34-104)||(5381774-5381844)
chr6 (35-122)||(5395150-5395237)
chr6 (61-134)||(5285957-5286030)
chr6 (24-133)||(5341790-5341899)
chr6 (26-127)||(5356415-5356516)
chr6 (21-133)||(5431503-5431615)
[»] chr7 (4 HSPs)
chr7 (21-134)||(36215686-36215799)
chr7 (31-179)||(34727541-34727689)
chr7 (31-179)||(34730699-34730847)
chr7 (31-179)||(34735298-34735446)


Alignment Details
Target: chr4 (Bit Score: 187; Significance: 1e-101; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 6624190 - 6624376
Alignment:
Q  1 actctagacgacctaagaagatgcatatcccttgttgtgatgataattctactccccggaccaaaccattcacggcttccacacaaagcctttagttggt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6624190 actctagacgacctaagaagatgcatatcccttgttgtgatgataattctactccccggaccaaaccattcacggcttccacacaaagcctttagttggt 6624289  T
Q  101 ccaattcattcacatcatcaagcacaagaagtaccctattctgggcaagtctttccttcaatatatttttccctgattcgatatcgc 187  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6624290 ccaattcattcacatcatcaagcacaagaagtaccctattctgggcaagtctttccttcaatatatttttccctgattcgatatcgc 6624376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 8 - 179
Target Start/End: Complemental strand, 6649254 - 6649083
Alignment:
Q  8 acgacctaagaagatgcatatcccttgttgtgatgataattctactccccggaccaaaccattcacggcttccacacaaagcctttagttggtccaattc 107  Q
    |||| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  6649254 acgatctaagaagatgcatatctctcgttgtgatgataattctactccccggaccaaaccattcacggcttccacacaaagcctttaattggtccaattc 6649155  T
Q  108 attcacatcatcaagcacaagaagtaccctattctgggcaagtctttccttcaatatatttttccctgattc 179  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||| |||||| ||||||||||||||||    
T  6649154 attcacatcatcaagcacaataagtaccctattctgggaaagtctttctttcaatgtatttttccctgattc 6649083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 14 - 179
Target Start/End: Complemental strand, 6751040 - 6750875
Alignment:
Q  14 taagaagatgcatatcccttgttgtgatgataattctactccccggaccaaaccattcacggcttccacacaaagcctttagttggtccaattcattcac 113  Q
    ||||||||| |||||  |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  6751040 taagaagatccatatttcttgttgtgatgattattctactccctggaccaaaccattcacggcttccacacaaagcttttagttggtccaattcattcac 6750941  T
Q  114 atcatcaagcacaagaagtaccctattctgggcaagtctttccttcaatatatttttccctgattc 179  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  6750940 atcatcaagcacaagaagtaccctattctgggcaagtctttgcttcaatatgtttttccctgattc 6750875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 13 - 179
Target Start/End: Original strand, 6535425 - 6535591
Alignment:
Q  13 ctaagaagatgcatatcccttgttgtgatgataattctactccccggaccaaaccattcacggcttccacacaaagcctttagttggtccaattcattca 112  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| |    
T  6535425 ctaagaagatgcatatcccttgttgtgatgattattctactccccgaaccaaaccattctcggcttccacacaaagcctttagttggtccaattcattaa 6535524  T
Q  113 catcatcaagcacaagaagtaccctattctgggcaagtctttccttcaatatatttttccctgattc 179  Q
    |||||||||| |||| || |||||| ||||||| |||||||| ||||||||||||||||||||||||    
T  6535525 catcatcaagtacaaaaaatacccttttctgggaaagtctttgcttcaatatatttttccctgattc 6535591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 6714017 - 6713839
Alignment:
Q  1 actctagacgacctaagaagatgcatatcccttgttgtgatgataattctactccccggaccaaaccattcacggcttccacacaaagcctttagttggt 100  Q
    |||||| |||| ||||||||| ||||||| |||||||||||||| | |||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  6714017 actctacacgatctaagaagacgcatatctcttgttgtgatgattactctactccccggaccaaaccatttgcggcttccacacaaagcctttagttggt 6713918  T
Q  101 ccaattcattcacatcatcaagcacaagaagtaccctattctgggcaagtctttccttcaatatatttttccctgattc 179  Q
    ||| || |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||    
T  6713917 ccagtttattcacatcatcaagcacaagaagtacccttttctgagcaagtctttccttcaataaatttttccctgattc 6713839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 8 - 179
Target Start/End: Complemental strand, 6726129 - 6725958
Alignment:
Q  8 acgacctaagaagatgcatatcccttgttgtgatgataattctactccccggaccaaaccattcacggcttccacacaaagcctttagttggtccaattc 107  Q
    |||| |||||||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||     
T  6726129 acgaactaagaagatgcttatctctcgttgtgatgataattctactccccggaccaaaccattcacggcttccatacaatgcctttagctggtccaattt 6726030  T
Q  108 attcacatcatcaagcacaagaagtaccctattctgggcaagtctttccttcaatatatttttccctgattc 179  Q
    |||||||||||| |||||||||||||| ||| |||||| |||||||||||||||||||||||||||||||||    
T  6726029 attcacatcatctagcacaagaagtacactagtctgggaaagtctttccttcaatatatttttccctgattc 6725958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 13 - 185
Target Start/End: Complemental strand, 6794638 - 6794466
Alignment:
Q  13 ctaagaagatgcatatcccttgttgtgatgataattctactccccggaccaaaccattcacggcttccacacaaagcctttagttggtccaattcattca 112  Q
    ||||||||||| ||||  ||||||||||| || |||||||||||||||||||||||||  ||||| |||||||| |||||||| ||||||||||||||||    
T  6794638 ctaagaagatgaatatttcttgttgtgattattattctactccccggaccaaaccatttgcggctaccacacaatgcctttagctggtccaattcattca 6794539  T
Q  113 catcatcaagcacaagaagtaccctattctgggcaagtctttccttcaatatatttttccctgattcgatatc 185  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  6794538 catcatcaagcacaagaagtatccttttctgggcaagtctttccttcaatatatttttccctgattctatatc 6794466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 13 - 179
Target Start/End: Original strand, 6589810 - 6589976
Alignment:
Q  13 ctaagaagatgcatatcccttgttgtgatgataattctactccccggaccaaaccattcacggcttccacacaaagcctttagttggtccaattcattca 112  Q
    ||||||||||||||||| ||||||||||| || ||||||||||||||||||||||| |||||||| ||||||||||||||||| || |||||||||||||    
T  6589810 ctaagaagatgcatatctcttgttgtgattattattctactccccggaccaaaccaatcacggctaccacacaaagcctttagctgctccaattcattca 6589909  T
Q  113 catcatcaagcacaagaagtaccctattctgggcaagtctttccttcaatatatttttccctgattc 179  Q
    ||||||||| ||||||||| ||||||||||||| |||| |||||||||| |||||||| ||||||||    
T  6589910 catcatcaaacacaagaagaaccctattctgggaaagtttttccttcaacatatttttgcctgattc 6589976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 13 - 179
Target Start/End: Complemental strand, 6756659 - 6756493
Alignment:
Q  13 ctaagaagatgcatatcccttgttgtgatgataattctactccccggaccaaaccattcacggcttccacacaaagcctttagttggtccaattcattca 112  Q
    |||||||||| | |||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||  |||||| | |    
T  6756659 ctaagaagattcctatctcttgttgtgatgattattctactacccggaccaaaccattcacggcttccacacaaaacctgtagttggtgaaattcactga 6756560  T
Q  113 catcatcaagcacaagaagtaccctattctgggcaagtctttccttcaatatatttttccctgattc 179  Q
    ||||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  6756559 catcatcaagcactagaagtaccctattctgggccagtctttgcttcaatatatttttccctgattc 6756493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 6672862 - 6672683
Alignment:
Q  1 actctagacgacctaagaagatgcatatcccttgttgtgatgataattctactcccc-ggaccaaaccattcacggcttccacacaaagcctttagttgg 99  Q
    |||||| |||| ||||||||||||||||| ||||| |||||||| | |||||||||  |||||||||||||||  ||||||||||||||||||||| ||     
T  6672862 actctacacgatctaagaagatgcatatctcttgtggtgatgattactctactcccttggaccaaaccattcatagcttccacacaaagcctttagctga 6672763  T
Q  100 tccaattcattcacatcatcaagcacaagaagtaccctattctgggcaagtctttccttcaatatatttttccctgattc 179  Q
    |||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||| ||||||||||| ||||||    
T  6672762 tccaattcattcacatcatcaagcacaagaagtaccttgctctgggcaagtctttccttcagtatatttttccttgattc 6672683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 6813965 - 6813799
Alignment:
Q  16 agaagatgcatatcccttgttgtgatgataattctactccccggaccaaaccattcacggcttccacacaaagcctttagttggtccaattcattcacat 115  Q
    |||||| ||||||  || |||||||| || |||||||| ||| |||||||||||||  |||||||||||||||||||||| || ||||||||||||||||    
T  6813965 agaagacgcatatttctagttgtgattattattctactgcccagaccaaaccattcgtggcttccacacaaagcctttagctgctccaattcattcacat 6813866  T
Q  116 catcaagcacaagaagtaccctattctgggcaagtctttccttcaatatatttttccctgattcgat 182  Q
    |||||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||||    
T  6813865 catcaagcacaagaagtaccttcttctgggaaagtctttccttcaatatatttttccctgattcgat 6813799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 14 - 179
Target Start/End: Original strand, 6500122 - 6500287
Alignment:
Q  14 taagaagatgcatatcccttgttgtgatgataattctactccccggaccaaaccattcacggcttccacacaaagcctttagttggtccaattcattcac 113  Q
    |||||||||||| ||| ||||||||||| || |||||||||||||||||||||||||| ||||||||| |||||||||||||||| |||| ||| |||||    
T  6500122 taagaagatgcaaatctcttgttgtgataattattctactccccggaccaaaccattcgcggcttccaaacaaagcctttagttgatccagttcgttcac 6500221  T
Q  114 atcatcaagcacaagaagtaccctattctgggcaagtctttccttcaatatatttttccctgattc 179  Q
    |||||||||||||| ||||||| | ||||| | |||||||| | ||||||| ||||||||||||||    
T  6500222 atcatcaagcacaaaaagtacctttttctgagaaagtctttgcctcaatatgtttttccctgattc 6500287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 24 - 182
Target Start/End: Complemental strand, 6834357 - 6834199
Alignment:
Q  24 catatcccttgttgtgatgataattctactccccggaccaaaccattcacggcttccacacaaagcctttagttggtccaattcattcacatcatcaagc 123  Q
    |||||| ||||| |||||||| |||||||| || | |||||||||||| || |||||||||||||| |||||||||| ||||||| | ||||||||||||    
T  6834357 catatctcttgtcgtgatgattattctacttccggaaccaaaccattcgcgacttccacacaaagcatttagttggtgcaattcagttacatcatcaagc 6834258  T
Q  124 acaagaagtaccctattctgggcaagtctttccttcaatatatttttccctgattcgat 182  Q
    |||| ||| ||||| ||||| |||||||||| |||||||||| ||||||||||||||||    
T  6834257 acaaaaagcacccttttctgagcaagtctttgcttcaatataattttccctgattcgat 6834199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 8 - 179
Target Start/End: Original strand, 6547671 - 6547842
Alignment:
Q  8 acgacctaagaagatgcatatcccttgttgtgatgataattctactccccggaccaaaccattcacggcttccacacaaagcctttagttggtccaattc 107  Q
    |||| ||||||||| ||||||| |||||||||||||| ||||| ||||| |||||||||||||  |||||||||||||| ||||||| |||||||| |||    
T  6547671 acgatctaagaagacgcatatctcttgttgtgatgattattctgctcccgggaccaaaccatttgcggcttccacacaatgcctttatttggtccagttc 6547770  T
Q  108 attcacatcatcaagcacaagaagtaccctattctgggcaagtctttccttcaatatatttttccctgattc 179  Q
    ||| |||||||||||||| | ||| || ||||| | ||  ||||||||||| ||| ||||||||||||||||    
T  6547771 atttacatcatcaagcactaaaagcactctattatcggagagtctttcctttaatgtatttttccctgattc 6547842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 21 - 184
Target Start/End: Original strand, 4126231 - 4126394
Alignment:
Q  21 atgcatatcccttgttgtgatgataattctactccccggaccaaaccattcacggcttccacacaaagcctttagttggtccaattcattcacatcatca 120  Q
    |||| ||||||| || |||||||| ||||||||||| ||| ||||||||| ||  |||||||||||||| || ||||||||||||| ||||||||| |||    
T  4126231 atgcttatccctggtcgtgatgattattctactccctggagcaaaccatttacaacttccacacaaagcattgagttggtccaatttattcacatcgtca 4126330  T
Q  121 agcacaagaagtaccctattctgggcaagtctttccttcaatatatttttccctgattcgatat 184  Q
    || |||||||| || || || ||   ||||| |||||| ||||||  |||||||||||| ||||    
T  4126331 agtacaagaagaactcttttatgacaaagtcgttcctttaatatagatttccctgattcaatat 4126394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 21 - 131
Target Start/End: Complemental strand, 4343150 - 4343040
Alignment:
Q  21 atgcatatcccttgttgtgatgataattctactccccggaccaaaccattcacggcttccacacaaagcctttagttggtccaattcattcacatcatca 120  Q
    |||| ||||||| ||||||||||| ||||||||||| ||| ||||||||  ||| |||||||||||||| |||||||| ||||||| ||||||||| |||    
T  4343150 atgcttatccctggttgtgatgattattctactccctggagcaaaccatctacgacttccacacaaagcatttagttgatccaatttattcacatcgtca 4343051  T
Q  121 agcacaagaag 131  Q
    || ||||||||    
T  4343050 agtacaagaag 4343040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 21 - 179
Target Start/End: Complemental strand, 4358618 - 4358460
Alignment:
Q  21 atgcatatcccttgttgtgatgataattctactccccggaccaaaccattcacggcttccacacaaagcctttagttggtccaattcattcacatcatca 120  Q
    |||| ||||||| |||||||||||||||||||| || ||| ||||||||| ||  |||||||||||||| |||||||||||||||| ||| ||||| |||    
T  4358618 atgcttatccctagttgtgatgataattctacttcctggagcaaaccatttacaacttccacacaaagcatttagttggtccaatttattgacatcgtca 4358519  T
Q  121 agcacaagaagtaccctattctgggcaagtctttccttcaatatatttttccctgattc 179  Q
    || |||| |||||| || || ||    ||||||||||| ||||||  ||| ||||||||    
T  4358518 agtacaataagtactcttttatgacacagtctttcctttaatatagattttcctgattc 4358460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 4351434 - 4351330
Alignment:
Q  24 catatcccttgttgtgatgataattctactccccggaccaaaccattcacggcttccacacaaagcctttagttggtccaattcattcacatcatcaagc 123  Q
    ||||||||| ||||||||||| ||||||||||| ||| ||||||||| ||  |||||||||||||  || ||||||||||||| ||||||||| |||||     
T  4351434 catatccctggttgtgatgattattctactcccaggagcaaaccatttacaacttccacacaaagtattaagttggtccaatttattcacatcgtcaagt 4351335  T
Q  124 acaag 128  Q
    |||||    
T  4351334 acaag 4351330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 21 - 134
Target Start/End: Original strand, 4322896 - 4323009
Alignment:
Q  21 atgcatatcccttgttgtgatgataattctactccccggaccaaaccattcacggcttccacacaaagcctttagttggtccaattcattcacatcatca 120  Q
    |||| |||| || ||||||||||| |||||||| || ||| ||||||||| ||  |||||||||||||| ||||| ||||||| || ||||||||| |||    
T  4322896 atgcttatctctagttgtgatgattattctactacctggagcaaaccatttacaacttccacacaaagcatttagctggtccagtttattcacatcgtca 4322995  T
Q  121 agcacaagaagtac 134  Q
    || |||||||||||    
T  4322996 agtacaagaagtac 4323009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 4925867 - 4925774
Alignment:
Q  1 actctagacgacctaagaagatgcatatcccttgttgtgatgataattctactccccggaccaaaccattcacggcttccacacaaagccttta 94  Q
    |||||| |||| | ||||||||| ||||  |||||||||||||| |||||||| |||||||||||||  ||  |||||||||||||||||||||    
T  4925867 actctacacgatccaagaagatgaatatttcttgttgtgatgattattctactacccggaccaaaccggtcgtggcttccacacaaagccttta 4925774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 26 - 137
Target Start/End: Complemental strand, 6811922 - 6811811
Alignment:
Q  26 tatcccttgttgtgatgataattctactccccggaccaaaccattcacggcttccacacaaagcctttagttggtccaattcattcacatcatcaagcac 125  Q
    |||| |||||||||||||| ||| | || || |  |||||||||||||| ||||| |||||||| ||||| || ||||||| ||| ||||| ||||| ||    
T  6811922 tatctcttgttgtgatgattattttgctaccggtgccaaaccattcacgacttccgcacaaagcgtttagctgctccaatttattaacatcgtcaagtac 6811823  T
Q  126 aagaagtaccct 137  Q
    ||||||||||||    
T  6811822 aagaagtaccct 6811811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 127
Target Start/End: Complemental strand, 4333760 - 4333654
Alignment:
Q  21 atgcatatcccttgttgtgatgataattctactccccggaccaaaccattcacggcttccacacaaagcctttagttggtccaattcattcacatcatca 120  Q
    |||| ||||||| ||||| ||||| ||||||||||| ||| ||||||||| ||| |||||||||| |   |||||||||||||||| ||| ||||| |||    
T  4333760 atgcttatccctagttgtaatgattattctactcccaggagcaaaccatttacgacttccacacagaatatttagttggtccaatttattaacatcgtca 4333661  T
Q  121 agcacaa 127  Q
    || ||||    
T  4333660 agtacaa 4333654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 72
Target Start/End: Complemental strand, 8413013 - 8412955
Alignment:
Q  14 taagaagatgcatatcccttgttgtgatgataattctactccccggaccaaaccattca 72  Q
    ||||||||||||| || |||||||||||||| |||||||| ||||||||||||||||||    
T  8413013 taagaagatgcatctctcttgttgtgatgattattctacttcccggaccaaaccattca 8412955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 15 - 93
Target Start/End: Original strand, 4925690 - 4925769
Alignment:
Q  15 aagaagatgcatatccctt-gttgtgatgataattctactccccggaccaaaccattcacggcttccacacaaagccttt 93  Q
    ||||| ||||||||| ||| ||||||||||| |||||||| || |||||||||||  | |||||||||||||||||||||    
T  4925690 aagaatatgcatatctctttgttgtgatgattattctactacctggaccaaaccagccgcggcttccacacaaagccttt 4925769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 137
Target Start/End: Original strand, 6503545 - 6503651
Alignment:
Q  31 cttgttgtgatgataattctactccccggaccaaaccattcacggcttccacacaaagcctttagttggtccaattcattcacatcatcaagcacaagaa 130  Q
    |||||||||||||| ||| | || || ||||||||||| || ||  |||||||||||||||||||||| ||||||| ||  ||||  ||||| | |||||    
T  6503545 cttgttgtgatgattattttgctgcctggaccaaaccaatcccgatttccacacaaagcctttagttgctccaatttatcaacattgtcaagtagaagaa 6503644  T
Q  131 gtaccct 137  Q
    |||||||    
T  6503645 gtaccct 6503651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 177
Target Start/End: Complemental strand, 8412941 - 8412893
Alignment:
Q  129 aagtaccctattctgggcaagtctttccttcaatatatttttccctgat 177  Q
    |||||||||| ||||||||||||||||||||| |||| |||||||||||    
T  8412941 aagtaccctagtctgggcaagtctttccttcagtatacttttccctgat 8412893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 106
Target Start/End: Original strand, 6502294 - 6502369
Alignment:
Q  31 cttgttgtgatgataattctactccccggaccaaaccattcacggcttccacacaaagcctttagttggtccaatt 106  Q
    |||||||||||||| ||| | || || || |||||||| || || ||||||||||||||||||||||| |||||||    
T  6502294 cttgttgtgatgattatttttctgcctgggccaaaccaatcccgacttccacacaaagcctttagttgctccaatt 6502369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 137
Target Start/End: Complemental strand, 6832440 - 6832329
Alignment:
Q  26 tatcccttgttgtgatgataattctactccccggaccaaaccattcacggcttccacacaaagcctttagttggtccaattcattcacatcatcaagcac 125  Q
    |||| |||||||||||||| ||| | || ||  ||||||||||||| ||  ||||||||||||||||||| || ||||||| ||  ||||  ||||| |     
T  6832440 tatctcttgttgtgatgattattttgcttcctcgaccaaaccattcccgatttccacacaaagcctttagctgatccaatttatcaacattgtcaagtat 6832341  T
Q  126 aagaagtaccct 137  Q
    ||||||||||||    
T  6832340 aagaagtaccct 6832329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 25568197 - 25568099
Alignment:
Q  24 catatcccttgttgtgatgataattctactccccggaccaaaccattcacggcttccacacaaagcctttagttggtccaattcattcacatcatcaag 122  Q
    |||||| || || |||||||  |||||||| |||| ||||||||||| ||| | |||||||||||| || | ||| ||||||  |||||||||||||||    
T  25568197 catatctctagtggtgatgactattctactacccgaaccaaaccattgacgacgtccacacaaagcattcaattgatccaatgtattcacatcatcaag 25568099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 119
Target Start/End: Original strand, 7888546 - 7888638
Alignment:
Q  27 atcccttgttgtgatgataattctactccccggaccaaaccattcacggcttccacacaaagcctttagttggtccaattcattcacatcatc 119  Q
    |||||||||||||||||  |||||||| |||  |||||||||||  ||   |||||||||||| || | ||| ||||||| ||||||||||||    
T  7888546 atcccttgttgtgatgagtattctacttcccttaccaaaccattttcgatctccacacaaagcattcaattgatccaatttattcacatcatc 7888638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0373 (Bit Score: 121; Significance: 3e-62; HSPs: 1)
Name: scaffold0373
Description:

Target: scaffold0373; HSP #1
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 13 - 185
Target Start/End: Original strand, 11665 - 11837
Alignment:
Q  13 ctaagaagatgcatatcccttgttgtgatgataattctactccccggaccaaaccattcacggcttccacacaaagcctttagttggtccaattcattca 112  Q
    ||||||||||| ||||  ||||||||||| || |||||||||||||||||||||||||  ||||| |||||||| |||||||| ||||||||||||||||    
T  11665 ctaagaagatgaatatttcttgttgtgattattattctactccccggaccaaaccatttgcggctaccacacaatgcctttagctggtccaattcattca 11764  T
Q  113 catcatcaagcacaagaagtaccctattctgggcaagtctttccttcaatatatttttccctgattcgatatc 185  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  11765 catcatcaagcacaagaagtatccttttctgggcaagtctttccttcaatatatttttccctgattctatatc 11837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 34 - 134
Target Start/End: Original strand, 10475 - 10575
Alignment:
Q  34 gttgtgatgataattctactccccggaccaaaccattcacggcttccacacaaagcctttagttggtccaattcattcacatcatcaagcacaagaagta 133  Q
    ||||| ||||| |||||| |||| | ||||||||||||||| |||||||||||||| ||||||||||||||   || |||||||||||| ||||||||||    
T  10475 gttgtaatgattattctagtccctgaaccaaaccattcacgacttccacacaaagcatttagttggtccaaactatccacatcatcaagaacaagaagta 10574  T
Q  134 c 134  Q
    |    
T  10575 c 10575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 1e-21; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 26 - 122
Target Start/End: Complemental strand, 5094244 - 5094148
Alignment:
Q  26 tatcccttgttgtgatgataattctactccccggaccaaaccattcacggcttccacacaaagcctttagttggtccaattcattcacatcatcaag 122  Q
    |||||||||| || ||||| ||||||||||||||||||||||||| | | ||||| |||||||| |||||||||||||||  ||| |||||||||||    
T  5094244 tatcccttgtggtaatgattattctactccccggaccaaaccatttatgacttccgcacaaagcatttagttggtccaatgtattaacatcatcaag 5094148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 26 - 105
Target Start/End: Original strand, 5068873 - 5068952
Alignment:
Q  26 tatcccttgttgtgatgataattctactccccggaccaaaccattcacggcttccacacaaagcctttagttggtccaat 105  Q
    |||||||||| |||||||| |||||||| |||| ||||||||| | ||| |||||||||||||| |||||||||||||||    
T  5068873 tatcccttgtggtgatgattattctacttcccgaaccaaaccacttacgacttccacacaaagcatttagttggtccaat 5068952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 38 - 127
Target Start/End: Complemental strand, 5348602 - 5348513
Alignment:
Q  38 tgatgataattctactccccggaccaaaccattcacggcttccacacaaagcctttagttggtccaattcattcacatcatcaagcacaa 127  Q
    ||||||||||||||||||||| ||||||||||| ||  ||||| |||||||| |||| ||||||||||  ||| ||||||||||| ||||    
T  5348602 tgatgataattctactccccgaaccaaaccatttacaacttccgcacaaagcatttaattggtccaatgtattaacatcatcaagaacaa 5348513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 26 - 122
Target Start/End: Complemental strand, 5423956 - 5423860
Alignment:
Q  26 tatcccttgttgtgatgataattctactccccggaccaaaccattcacggcttccacacaaagcctttagttggtccaattcattcacatcatcaag 122  Q
    |||| ||||||||||| || ||||||||||||| ||||||||||| | | |||||||||||||| || ||||||||||||  ||| || ||||||||    
T  5423956 tatctcttgttgtgataattattctactccccgaaccaaaccatttatgacttccacacaaagcattcagttggtccaatgtattaacgtcatcaag 5423860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 127
Target Start/End: Original strand, 5104666 - 5104772
Alignment:
Q  21 atgcatatcccttgttgtgatgataattctactccccggaccaaaccattcacggcttccacacaaagcctttagttggtccaattcattcacatcatca 120  Q
    |||| ||||||||||||| ||||| ||||||||||||| ||||||||||| ||  |||||||||||||| |  |||||||| | |  ||| |||||||||    
T  5104666 atgcctatcccttgttgtaatgattattctactccccgaaccaaaccatttacaacttccacacaaagcatccagttggtcaagtgtattaacatcatca 5104765  T
Q  121 agcacaa 127  Q
    || ||||    
T  5104766 agtacaa 5104772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 26 - 105
Target Start/End: Original strand, 5159300 - 5159379
Alignment:
Q  26 tatcccttgttgtgatgataattctactccccggaccaaaccattcacggcttccacacaaagcctttagttggtccaat 105  Q
    |||||||||| || ||||| ||||||||||| | ||||||||||| | | ||||| |||||||| |||||||||||||||    
T  5159300 tatcccttgtggtaatgattattctactcccagaaccaaaccatttatgacttccgcacaaagcatttagttggtccaat 5159379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 127
Target Start/End: Original strand, 5075525 - 5075631
Alignment:
Q  21 atgcatatcccttgttgtgatgataattctactccccggaccaaaccattcacggcttccacacaaagcctttagttggtccaattcattcacatcatca 120  Q
    |||||||||||| |||||||| || ||||||||||| | || || ||||| |||  |||| |||||||| || | ||| ||||||||| |||||||||||    
T  5075525 atgcatatccctggttgtgataattattctactccctgaactaagccatttacgatttccgcacaaagcattcaattgctccaattcactcacatcatca 5075624  T
Q  121 agcacaa 127  Q
    || ||||    
T  5075625 agtacaa 5075631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 34 - 176
Target Start/End: Original strand, 5183759 - 5183901
Alignment:
Q  34 gttgtgatgataattctactccccggaccaaaccattcacggcttccacacaaagcctttagttggtccaattcattcacatcatcaagcacaagaagta 133  Q
    ||||||||||| ||||| ||||| ||||||| |||   ||  |||||||||||||| || |||||||| |||  ||||||||||||||| || |||||||    
T  5183759 gttgtgatgattattctgctccctggaccaagccaaatactccttccacacaaagcattcagttggtcaaatgtattcacatcatcaagtaccagaagta 5183858  T
Q  134 ccctattctgggcaagtctttccttcaatatatttttccctga 176  Q
    | || || |||   ||||| ||||| | |||| ||||||||||    
T  5183859 ctcttttatggaagagtctatcctttagtatacttttccctga 5183901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 105
Target Start/End: Complemental strand, 5368658 - 5368584
Alignment:
Q  31 cttgttgtgatgataattctactccccggaccaaaccattcacggcttccacacaaagcctttagttggtccaat 105  Q
    ||||| |||||||| ||||| || |||| ||||||||| | ||| |||||||||||||| |||||||||||||||    
T  5368658 cttgtggtgatgattattctgcttcccgaaccaaaccacttacgacttccacacaaagcatttagttggtccaat 5368584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 134
Target Start/End: Original strand, 5148753 - 5148866
Alignment:
Q  21 atgcatatcccttgttgtgatgataattctactccccggaccaaaccattcacggcttccacacaaagcctttagttggtccaattcattcacatcatca 120  Q
    ||||||||| || |||||||| || |||||||| ||||  |||||||||| ||| ||||||||||||||  | | ||| |||||   | |||||||||||    
T  5148753 atgcatatctctagttgtgataattattctacttcccgagccaaaccattgacgacttccacacaaagcagtcaattgatccaacgtactcacatcatca 5148852  T
Q  121 agcacaagaagtac 134  Q
    || |||||||||||    
T  5148853 agtacaagaagtac 5148866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 134
Target Start/End: Complemental strand, 5445291 - 5445178
Alignment:
Q  21 atgcatatcccttgttgtgatgataattctactccccggaccaaaccattcacggcttccacacaaagcctttagttggtccaattcattcacatcatca 120  Q
    ||||||||| || |||||||| || ||| ||||||| |  |||||||||||||| ||| |||| ||||  || |||||||| |||  |||||||||||||    
T  5445291 atgcatatctctggttgtgattattattatactccctgagccaaaccattcacgacttgcacagaaagtattaagttggtctaatgtattcacatcatca 5445192  T
Q  121 agcacaagaagtac 134  Q
    || |||| ||||||    
T  5445191 agtacaacaagtac 5445178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 34 - 104
Target Start/End: Complemental strand, 5381844 - 5381774
Alignment:
Q  34 gttgtgatgataattctactccccggaccaaaccattcacggcttccacacaaagcctttagttggtccaa 104  Q
    ||||| ||||| |||||| |||| | ||||||||||| ||| |||||||||| ||| ||||||||||||||    
T  5381844 gttgtcatgattattctagtccctgaaccaaaccatttacgacttccacacagagcatttagttggtccaa 5381774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 122
Target Start/End: Complemental strand, 5395237 - 5395150
Alignment:
Q  35 ttgtgatgataattctactccccggaccaaaccattcacggcttccacacaaagcctttagttggtccaattcattcacatcatcaag 122  Q
    |||||||||| ||||| ||||| | ||||| ||| | ||| ||||||||||| || |||||||| || |||  |||||||||||||||    
T  5395237 ttgtgatgattattctgctccctgaaccaagccaattacgacttccacacaatgcatttagttgttcaaatgtattcacatcatcaag 5395150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 61 - 134
Target Start/End: Original strand, 5285957 - 5286030
Alignment:
Q  61 ccaaaccattcacggcttccacacaaagcctttagttggtccaattcattcacatcatcaagcacaagaagtac 134  Q
    |||||||||||||| |||||||| ||||  || |||||||| | |  ||||||||||||||| |||| ||||||    
T  5285957 ccaaaccattcacgacttccacagaaagtattcagttggtctagtgtattcacatcatcaagtacaataagtac 5286030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 133
Target Start/End: Complemental strand, 5341899 - 5341790
Alignment:
Q  24 catatcccttgttgtgatgataattctactccccggaccaaaccattcacggcttccacacaaagcctttagttggtccaattcattcacatcatcaagc 123  Q
    |||||| || ||||||||||  ||| ||||||| | ||||||||| | |||    ||||| ||||| || ||||||||||||  |||||||||||| ||     
T  5341899 catatctctagttgtgatgactattttactccctgaaccaaaccaattacgctcaccacataaagctttcagttggtccaatgaattcacatcatctagt 5341800  T
Q  124 acaagaagta 133  Q
    ||||||||||    
T  5341799 acaagaagta 5341790  T

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Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 127
Target Start/End: Original strand, 5356415 - 5356516
Alignment:
Q  26 tatcccttgttgtgatgataattctactccccggaccaaaccattcacggcttccacacaaagcctttagttggtccaattcattcacatcatcaagcac 125  Q
    |||| ||||||||||| || ||||||||||||  ||||||||| | | | || ||||||||| | || |||||||||||   ||| ||||||||||| ||    
T  5356415 tatctcttgttgtgataattattctactccccaaaccaaaccaatgatgactgccacacaaaacattcagttggtccaaagtattaacatcatcaagtac 5356514  T
Q  126 aa 127  Q
    ||    
T  5356515 aa 5356516  T

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Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 133
Target Start/End: Complemental strand, 5431615 - 5431503
Alignment:
Q  21 atgcatatcccttgttgtgatgataattctactccccggaccaaaccattcacggcttccacacaaagcctttagttggtccaattcattcacatcatca 120  Q
    ||||||||  || |||||||| || |||||||||||   ||||||||| | ||| |||||||||||||| |  |  || ||||| ||||||||||| |||    
T  5431615 atgcatatttctggttgtgataattattctactccctaaaccaaaccaattacgacttccacacaaagcatccaactgttccaactcattcacatcgtca 5431516  T
Q  121 agcacaagaagta 133  Q
    || |||| |||||    
T  5431515 agtacaataagta 5431503  T

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Target: chr7 (Bit Score: 46; Significance: 2e-17; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 21 - 134
Target Start/End: Original strand, 36215686 - 36215799
Alignment:
Q  21 atgcatatcccttgttgtgatgataattctactccccggaccaaaccattcacggcttccacacaaagcctttagttggtccaattcattcacatcatca 120  Q
    |||| |||| || ||||||||||| ||||||||||||  ||||||||||| ||| |||||||||||||| || | ||| ||||||  | |||| ||||||    
T  36215686 atgcctatctctagttgtgatgattattctactccccacaccaaaccattgacgacttccacacaaagcattaaattgatccaatgtactcacgtcatca 36215785  T
Q  121 agcacaagaagtac 134  Q
    || |||||||||||    
T  36215786 agtacaagaagtac 36215799  T

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Target: chr7; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 31 - 179
Target Start/End: Original strand, 34727541 - 34727689
Alignment:
Q  31 cttgttgtgatgataattctactccccggaccaaaccattcacggcttccacacaaagcctttagttggtccaattcattcacatcatcaagcacaagaa 130  Q
    ||||| ||||| || |||||||| ||   ||||||||||||| | |||||||||||||| || | |||||||| || ||||||||| |||||||||||||    
T  34727541 cttgtagtgatcattattctacttccttcaccaaaccattcatgacttccacacaaagcattcaattggtccactttattcacatcgtcaagcacaagaa 34727640  T
Q  131 gtaccctattctgggcaagtctttccttcaatatatttttccctgattc 179  Q
     || ||| || ||   ||||||||||| ||||||  |||| ||||||||    
T  34727641 atatcctcttatgacgaagtctttcctgcaatatcatttttcctgattc 34727689  T

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Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 179
Target Start/End: Original strand, 34730699 - 34730847
Alignment:
Q  31 cttgttgtgatgataattctactccccggaccaaaccattcacggcttccacacaaagcctttagttggtccaattcattcacatcatcaagcacaagaa 130  Q
    |||||||||||||| |||||||| ||   |||||||||| |  | ||||| |||||||| || | |||||||| || ||||||||| || ||||||||||    
T  34730699 cttgttgtgatgattattctacttccttcaccaaaccatccgtgacttccgcacaaagcattcaattggtccagtttattcacatcgtccagcacaagaa 34730798  T
Q  131 gtaccctattctgggcaagtctttccttcaatatatttttccctgattc 179  Q
     || ||| || ||   ||||||||||| ||||||  |||| ||||||||    
T  34730799 atatcctcttatgacaaagtctttcctgcaatatcatttttcctgattc 34730847  T

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Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 179
Target Start/End: Original strand, 34735298 - 34735446
Alignment:
Q  31 cttgttgtgatgataattctactccccggaccaaaccattcacggcttccacacaaagcctttagttggtccaattcattcacatcatcaagcacaagaa 130  Q
    |||||||||||||| |||||||| ||   |||||||||| |  | ||||| |||||||| || | |||||||| || ||||||||| || ||||||||||    
T  34735298 cttgttgtgatgattattctacttccttcaccaaaccatccgtgacttccgcacaaagcattcaattggtccagtttattcacatcgtccagcacaagaa 34735397  T
Q  131 gtaccctattctgggcaagtctttccttcaatatatttttccctgattc 179  Q
     || ||| || ||   ||||||||||| ||||||  |||| ||||||||    
T  34735398 atatcctcttatgacgaagtctttcctgcaatatcatttttcctgattc 34735446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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