View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15320_high_13 (Length: 237)
Name: NF15320_high_13
Description: NF15320
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15320_high_13 |
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Alignment Details
Target: chr4 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 34465976 - 34465758
Alignment:
| Q |
1 |
ttctttggttcattcttccatgttctgacattgtgacgtggcagtggtggtaaagggtgtaactccggcgagtctgtaacataccggtacggcggaggga |
100 |
Q |
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| T |
34465976 |
ttctttggttcattcttccatgttctgacattgtgacgtggcagtggtggtaaagggtgtaactccggcgagtctgtaacataccggtacggcggaggga |
34465877 |
T |
|
| Q |
101 |
aaccgtcattgctgttaccgttacagcttgactctgctgttgcttttgtgtcatctaaagttgttgttatagttccaaggttgaataactccgacataga |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
34465876 |
aaccgtcattgctgttaccgttacagcttgactctgctgttgcttttgtgtcatctaaagt---tgttatagttccaaggttgaataactccgacataga |
34465780 |
T |
|
| Q |
201 |
acttgacttgtcgttggttgtt |
222 |
Q |
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|||||||||||||||||||||| |
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| T |
34465779 |
acttgacttgtcgttggttgtt |
34465758 |
T |
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