View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15320_high_9 (Length: 274)
Name: NF15320_high_9
Description: NF15320
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15320_high_9 |
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Alignment Details
Target: chr8 (Bit Score: 67; Significance: 8e-30; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 80 - 150
Target Start/End: Original strand, 35381651 - 35381721
Alignment:
| Q |
80 |
ctgcttgtattctcatctcatttcattttcacctctacactacaccaccacactctgactatataataata |
150 |
Q |
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| T |
35381651 |
ctgcttgtattctcatctcatttcattttcacctctacactacaccaccatactctgactatataataata |
35381721 |
T |
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Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 35381572 - 35381614
Alignment:
| Q |
1 |
taatttgagctattaggtttagattaatttttctatttatact |
43 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35381572 |
taatttgagctattaggtttagattaatttttctatttatact |
35381614 |
T |
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