View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15322_low_34 (Length: 340)
Name: NF15322_low_34
Description: NF15322
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15322_low_34 |
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Alignment Details
Target: chr7 (Bit Score: 293; Significance: 1e-164; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 1 - 321
Target Start/End: Original strand, 33967763 - 33968083
Alignment:
| Q |
1 |
tgttttcgatcattaatttttgctccattcattcaatttacttacaaaattttgtatgcaattctgatttaatttctaaattgcacatgtcagggcaaag |
100 |
Q |
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| T |
33967763 |
tgttttcaatcattaatttttgctccattcattcaatttacttacaaaattttgtatgcaattctgatttaatttctaaattgcacatgtcagggcaaag |
33967862 |
T |
|
| Q |
101 |
taatatcgattcagagatcttattgtcaacagcccttgatttcggccggtaatgttatttagatattgcattttttcaatcctaatcacggcagaactta |
200 |
Q |
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| T |
33967863 |
taatatcgattcagagatcttactgtcaacagcccttgatttcggccggtaatgttatttagatattgcattttttcaatcctaaacacggcagaactta |
33967962 |
T |
|
| Q |
201 |
attaatataacaaatctctttatctcttgatagtttgcaagtgatagcgcatatgttttcttttaaaatgcttcacagaatccttgttcaacctcaaagg |
300 |
Q |
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| T |
33967963 |
attaatttagcaaatctctttatctgttgatagtttgcaagtgatagcgcatatgttttcttttaaaatgcttcacagaatcctttttcaacctcaaagg |
33968062 |
T |
|
| Q |
301 |
tattccaaaaaatgttcttgg |
321 |
Q |
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||||||||||||||||||||| |
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| T |
33968063 |
tattccaaaaaatgttcttgg |
33968083 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 33431840 - 33431749
Alignment:
| Q |
1 |
tgttttcgatcattaatttttgctccattcattcaatttacttacaaaattttgtatgca-attctgatttaatttctaaattgcacatgtca |
92 |
Q |
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||||||| ||||||||||| |||| ||| ||||||||||||||||| ||| ||||| | ||||||||||||||||||||||||| |||||| |
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| T |
33431840 |
tgttttcaatcattaatttatgctatgttctttcaatttacttacaaacttt-gtatggatattctgatttaatttctaaattgcatatgtca |
33431749 |
T |
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