View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15322_low_47 (Length: 246)
Name: NF15322_low_47
Description: NF15322
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15322_low_47 |
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Alignment Details
Target: chr1 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 14 - 231
Target Start/End: Original strand, 36743084 - 36743301
Alignment:
| Q |
14 |
gaatagaaaaatggagaatgaagcagaagagcaaaacaattcaataaacaagaaaagttccactgtgatacgaatcccttcatatcaagaagtaattgaa |
113 |
Q |
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| T |
36743084 |
gaatagaaaaatggagaatgaagcagaaaagcaaaacaattcaataaacaagaaaagttccactgtgatacgaatcccttcatatcaagaagtaattgaa |
36743183 |
T |
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| Q |
114 |
tcttcacaaacaaaatcaactccaccatctctattcgttccgtctcaaactttttctcaagcttttgcgttcgtcaaatcctcagaattctactctccac |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36743184 |
tcttcacaaacaaaatcaactccaccatctctattcgttccgtctcaaactttttctcaagcttttgcgttcgtcaaatcctcagaattctactctccac |
36743283 |
T |
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| Q |
214 |
ctccttcacttccaaagt |
231 |
Q |
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|||||||||||||||||| |
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| T |
36743284 |
ctccttcacttccaaagt |
36743301 |
T |
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