View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15322_low_59 (Length: 213)
Name: NF15322_low_59
Description: NF15322
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15322_low_59 |
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Alignment Details
Target: chr3 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 10 - 141
Target Start/End: Original strand, 30730461 - 30730593
Alignment:
| Q |
10 |
catcatcataatcatgctaaaaggtatatttcgaagagataagtacagcgagttgtatatctaaacggcaagaaaaatgaaataaatatgcatggttg-n |
108 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
30730461 |
catcatcataatcatgctaaaaggtatatttcgaagagataagtacagcgatttgtatatctaaacggcaagaaaaatgaaatcaatatgcatggttgaa |
30730560 |
T |
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| Q |
109 |
nnnnnnntagtataatgaaaagagaatatacaa |
141 |
Q |
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|||||||||||||||||||||||||| |
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| T |
30730561 |
aaaaaaatagtataatgaaaagagaatatacaa |
30730593 |
T |
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