View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15324_high_43 (Length: 259)

Name: NF15324_high_43
Description: NF15324
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15324_high_43
NF15324_high_43
[»] chr2 (26 HSPs)
chr2 (20-156)||(39767166-39767302)
chr2 (29-154)||(41935562-41935688)
chr2 (33-151)||(15234255-15234374)
chr2 (23-151)||(35048558-35048687)
chr2 (50-150)||(4289603-4289703)
chr2 (42-152)||(3329146-3329256)
chr2 (23-149)||(15161922-15162049)
chr2 (42-152)||(31440675-31440785)
chr2 (22-140)||(16711394-16711514)
chr2 (51-152)||(32422780-32422881)
chr2 (214-259)||(39767066-39767111)
chr2 (42-129)||(44070467-44070554)
chr2 (50-152)||(25424717-25424819)
chr2 (23-152)||(29546135-29546265)
chr2 (50-152)||(33867585-33867687)
chr2 (61-152)||(4481030-4481121)
chr2 (23-129)||(11788559-11788665)
chr2 (61-152)||(23231705-23231796)
chr2 (23-143)||(8027500-8027622)
chr2 (42-152)||(38620347-38620457)
chr2 (22-87)||(44928791-44928857)
chr2 (29-121)||(2656739-2656832)
chr2 (218-259)||(2656927-2656968)
chr2 (29-153)||(29221228-29221353)
chr2 (29-153)||(29334527-29334652)
chr2 (99-152)||(30241441-30241494)
[»] chr3 (50 HSPs)
chr3 (22-156)||(27064125-27064260)
chr3 (50-150)||(45079251-45079351)
chr3 (22-129)||(26795320-26795429)
chr3 (23-151)||(49374727-49374856)
chr3 (29-156)||(2013094-2013220)
chr3 (42-152)||(6408528-6408638)
chr3 (50-152)||(19618647-19618749)
chr3 (42-152)||(44792686-44792796)
chr3 (50-152)||(48583692-48583793)
chr3 (23-151)||(32995168-32995297)
chr3 (53-150)||(42096788-42096885)
chr3 (42-150)||(30248100-30248207)
chr3 (32-151)||(35732179-35732299)
chr3 (34-152)||(19454730-19454849)
chr3 (23-152)||(23299564-23299694)
chr3 (42-152)||(24987450-24987560)
chr3 (52-150)||(41410303-41410401)
chr3 (42-152)||(49359916-49360026)
chr3 (214-259)||(2012993-2013038)
chr3 (52-152)||(51055423-51055523)
chr3 (53-156)||(2150718-2150821)
chr3 (29-151)||(10085305-10085428)
chr3 (29-151)||(10192225-10192348)
chr3 (23-151)||(5908165-5908294)
chr3 (94-156)||(9163037-9163099)
chr3 (23-152)||(25467420-25467550)
chr3 (78-156)||(33118688-33118766)
chr3 (62-152)||(35688276-35688366)
chr3 (65-151)||(46819137-46819223)
chr3 (214-259)||(9162936-9162981)
chr3 (52-151)||(6083587-6083686)
chr3 (50-129)||(27346543-27346622)
chr3 (69-152)||(39352442-39352525)
chr3 (23-129)||(43657202-43657309)
chr3 (69-152)||(50508915-50508998)
chr3 (42-152)||(13735670-13735780)
chr3 (218-259)||(26787536-26787577)
chr3 (214-259)||(27064316-27064361)
chr3 (218-259)||(27346695-27346736)
chr3 (214-259)||(33119015-33119060)
chr3 (42-151)||(38694858-38694967)
chr3 (23-140)||(40563873-40563991)
chr3 (42-152)||(41923923-41924033)
chr3 (218-259)||(2150618-2150659)
chr3 (218-259)||(19454915-19454956)
chr3 (218-259)||(28956852-28956893)
chr3 (218-259)||(30247993-30248034)
chr3 (218-259)||(35688431-35688472)
chr3 (218-259)||(41410196-41410237)
chr3 (64-152)||(8340117-8340205)
[»] chr7 (38 HSPs)
chr7 (29-156)||(36074159-36074287)
chr7 (42-152)||(19805003-19805113)
chr7 (23-152)||(1876082-1876212)
chr7 (23-152)||(28067310-28067440)
chr7 (50-150)||(17172260-17172360)
chr7 (52-152)||(38469958-38470058)
chr7 (42-152)||(27398545-27398655)
chr7 (50-150)||(44300686-44300786)
chr7 (61-152)||(5924109-5924200)
chr7 (42-152)||(10066298-10066408)
chr7 (50-152)||(16567540-16567642)
chr7 (50-152)||(16598020-16598122)
chr7 (50-152)||(46181186-46181288)
chr7 (29-129)||(9355224-9355325)
chr7 (23-121)||(9223587-9223686)
chr7 (23-149)||(34152399-34152526)
chr7 (23-149)||(34174598-34174725)
chr7 (62-143)||(45112179-45112260)
chr7 (64-152)||(43224305-43224393)
chr7 (100-156)||(48644535-48644591)
chr7 (69-152)||(36072597-36072680)
chr7 (52-150)||(40789572-40789670)
chr7 (20-152)||(25309552-25309685)
chr7 (63-152)||(43702453-43702542)
chr7 (33-151)||(26299108-26299227)
chr7 (214-259)||(16278563-16278608)
chr7 (218-259)||(36074056-36074097)
chr7 (33-129)||(40342378-40342475)
chr7 (60-152)||(48558723-48558815)
chr7 (214-257)||(48644447-48644490)
chr7 (63-141)||(4912728-4912806)
chr7 (63-129)||(46783062-46783128)
chr7 (218-259)||(1875975-1876016)
chr7 (218-259)||(28067205-28067246)
chr7 (218-259)||(44300852-44300893)
chr7 (100-152)||(3551572-3551624)
chr7 (124-156)||(16278476-16278508)
chr7 (60-152)||(42284488-42284580)
[»] chr4 (52 HSPs)
chr4 (29-156)||(51806959-51807087)
chr4 (23-151)||(8805959-8806088)
chr4 (42-152)||(2224989-2225099)
chr4 (23-140)||(11034644-11034762)
chr4 (42-152)||(42755309-42755419)
chr4 (42-150)||(29405907-29406015)
chr4 (50-150)||(52802299-52802399)
chr4 (50-150)||(53140587-53140687)
chr4 (42-152)||(3387248-3387358)
chr4 (42-152)||(12185747-12185857)
chr4 (42-152)||(12187739-12187849)
chr4 (52-150)||(45097540-45097638)
chr4 (52-152)||(21075808-21075908)
chr4 (61-152)||(22829725-22829816)
chr4 (42-152)||(14576760-14576870)
chr4 (214-259)||(44808599-44808644)
chr4 (214-259)||(51806858-51806903)
chr4 (44-156)||(1758008-1758120)
chr4 (52-151)||(26340264-26340363)
chr4 (42-156)||(652213-652327)
chr4 (50-152)||(29149048-29149150)
chr4 (50-152)||(32655554-32655656)
chr4 (50-152)||(42053300-42053402)
chr4 (50-152)||(52180810-52180912)
chr4 (214-259)||(24486701-24486746)
chr4 (23-151)||(28234206-28234334)
chr4 (29-152)||(2721265-2721389)
chr4 (29-156)||(14595254-14595382)
chr4 (29-152)||(22306835-22306959)
chr4 (41-152)||(9608937-9609046)
chr4 (49-152)||(41003295-41003398)
chr4 (50-152)||(52595521-52595623)
chr4 (214-259)||(9930576-9930621)
chr4 (214-259)||(14595438-14595483)
chr4 (94-150)||(33733397-33733453)
chr4 (60-152)||(34459663-34459755)
chr4 (63-150)||(22247849-22247936)
chr4 (22-156)||(39485163-39485298)
chr4 (78-156)||(1731079-1731157)
chr4 (42-152)||(21245808-21245918)
chr4 (42-156)||(27586612-27586726)
chr4 (218-259)||(23349321-23349362)
chr4 (51-139)||(24486549-24486637)
chr4 (69-152)||(54979178-54979261)
chr4 (69-151)||(56445196-56445278)
chr4 (218-259)||(22829880-22829921)
chr4 (29-153)||(31487221-31487346)
chr4 (52-152)||(33983115-33983215)
chr4 (23-151)||(39804219-39804347)
chr4 (218-259)||(41780787-41780828)
chr4 (218-259)||(47106553-47106594)
chr4 (42-150)||(46080686-46080794)
[»] chr1 (56 HSPs)
chr1 (29-151)||(39026685-39026808)
chr1 (23-151)||(47662213-47662342)
chr1 (17-156)||(4052401-4052541)
chr1 (29-152)||(31646338-31646462)
chr1 (22-156)||(30489603-30489738)
chr1 (42-152)||(42069157-42069267)
chr1 (50-150)||(4893334-4893434)
chr1 (50-150)||(29185053-29185153)
chr1 (51-150)||(33362937-33363036)
chr1 (23-152)||(19506321-19506451)
chr1 (23-152)||(28220906-28221036)
chr1 (23-152)||(50099751-50099881)
chr1 (23-150)||(19996717-19996845)
chr1 (29-156)||(48662602-48662729)
chr1 (61-152)||(29426353-29426444)
chr1 (29-151)||(35739052-35739175)
chr1 (42-150)||(20414926-20415034)
chr1 (29-152)||(48796481-48796605)
chr1 (42-152)||(424529-424639)
chr1 (23-156)||(945418-945552)
chr1 (23-152)||(2978357-2978487)
chr1 (42-152)||(13312691-13312801)
chr1 (78-156)||(31873338-31873415)
chr1 (42-152)||(35978549-35978658)
chr1 (29-151)||(14106264-14106384)
chr1 (52-129)||(46772565-46772642)
chr1 (22-149)||(2501510-2501638)
chr1 (29-143)||(48514376-48514491)
chr1 (61-152)||(610687-610778)
chr1 (69-152)||(25059086-25059169)
chr1 (61-156)||(33794437-33794532)
chr1 (61-152)||(44327969-44328060)
chr1 (50-152)||(25815366-25815468)
chr1 (42-152)||(48964413-48964523)
chr1 (218-259)||(16177006-16177047)
chr1 (63-152)||(29054645-29054734)
chr1 (29-152)||(2975284-2975408)
chr1 (69-129)||(40094572-40094632)
chr1 (81-152)||(32835550-32835621)
chr1 (50-152)||(9222209-9222311)
chr1 (94-152)||(48985140-48985198)
chr1 (218-259)||(4052301-4052342)
chr1 (63-152)||(35949640-35949729)
chr1 (60-129)||(38491395-38491464)
chr1 (218-259)||(46772419-46772460)
chr1 (52-156)||(10786185-10786289)
chr1 (65-152)||(30623038-30623125)
chr1 (99-156)||(973524-973581)
chr1 (214-259)||(7814958-7815003)
chr1 (29-89)||(8981661-8981722)
chr1 (218-259)||(20415100-20415141)
chr1 (29-129)||(22580129-22580230)
chr1 (214-243)||(30489793-30489822)
chr1 (42-152)||(31107686-31107798)
chr1 (219-259)||(610842-610882)
chr1 (70-149)||(2433247-2433327)
[»] chr5 (34 HSPs)
chr5 (22-139)||(10937359-10937477)
chr5 (23-152)||(29455730-29455860)
chr5 (23-143)||(4901988-4902109)
chr5 (41-152)||(7977988-7978100)
chr5 (42-150)||(38309735-38309843)
chr5 (42-152)||(14088228-14088337)
chr5 (23-140)||(15674030-15674147)
chr5 (42-150)||(19254528-19254636)
chr5 (50-150)||(41692508-41692608)
chr5 (23-129)||(14087603-14087710)
chr5 (42-129)||(15719243-15719330)
chr5 (53-152)||(35935276-35935375)
chr5 (42-152)||(14645274-14645384)
chr5 (42-152)||(41616543-41616653)
chr5 (50-150)||(34718824-34718924)
chr5 (23-140)||(33347126-33347244)
chr5 (214-259)||(10937484-10937529)
chr5 (84-152)||(24489111-24489179)
chr5 (214-256)||(5657656-5657698)
chr5 (71-151)||(35853510-35853590)
chr5 (23-129)||(6224894-6225001)
chr5 (23-151)||(30774745-30774875)
chr5 (105-152)||(41983270-41983317)
chr5 (32-129)||(639423-639521)
chr5 (69-151)||(32302375-32302457)
chr5 (218-259)||(639295-639336)
chr5 (32-152)||(16186716-16186837)
chr5 (106-151)||(16620353-16620398)
chr5 (214-250)||(42030993-42031029)
chr5 (22-152)||(19549288-19549419)
chr5 (218-259)||(6311115-6311156)
chr5 (218-259)||(16186901-16186942)
chr5 (218-259)||(19254421-19254462)
chr5 (218-259)||(25694609-25694650)
[»] scaffold0160 (2 HSPs)
scaffold0160 (23-152)||(26165-26295)
scaffold0160 (218-259)||(26059-26100)
[»] chr8 (30 HSPs)
chr8 (29-152)||(221927-222052)
chr8 (29-152)||(691082-691207)
chr8 (29-152)||(735550-735675)
chr8 (29-152)||(859446-859571)
chr8 (23-143)||(7579996-7580117)
chr8 (52-156)||(15961707-15961811)
chr8 (29-152)||(2621000-2621124)
chr8 (42-152)||(1376144-1376254)
chr8 (42-152)||(24789471-24789581)
chr8 (22-155)||(37226809-37226943)
chr8 (37-152)||(19643553-19643669)
chr8 (50-150)||(20216174-20216274)
chr8 (50-150)||(20235772-20235872)
chr8 (42-152)||(3616904-3617014)
chr8 (70-152)||(6109609-6109691)
chr8 (23-152)||(24891457-24891587)
chr8 (23-152)||(38019987-38020117)
chr8 (69-152)||(1667242-1667325)
chr8 (214-255)||(15542264-15542305)
chr8 (29-129)||(2472343-2472444)
chr8 (219-256)||(37226709-37226746)
chr8 (97-156)||(15542148-15542207)
chr8 (94-152)||(7057616-7057674)
chr8 (29-118)||(34776803-34776893)
chr8 (63-129)||(38551558-38551624)
chr8 (218-259)||(20216340-20216381)
chr8 (218-259)||(20235938-20235979)
chr8 (227-259)||(15961598-15961630)
chr8 (219-259)||(26561165-26561205)
chr8 (100-152)||(30801265-30801316)
[»] chr6 (16 HSPs)
chr6 (23-151)||(9062181-9062310)
chr6 (50-150)||(24447161-24447261)
chr6 (50-152)||(20691623-20691725)
chr6 (53-151)||(6337210-6337308)
chr6 (29-153)||(6337969-6338094)
chr6 (50-150)||(1221750-1221850)
chr6 (42-152)||(1329596-1329706)
chr6 (42-152)||(33331566-33331676)
chr6 (42-152)||(13534226-13534336)
chr6 (23-114)||(6799498-6799590)
chr6 (42-129)||(31784030-31784117)
chr6 (42-152)||(31070762-31070872)
chr6 (61-129)||(6938029-6938097)
chr6 (52-152)||(33328564-33328664)
chr6 (42-129)||(29641510-29641597)
chr6 (218-259)||(33960083-33960124)
[»] scaffold0242 (4 HSPs)
scaffold0242 (23-129)||(13134-13241)
scaffold0242 (23-129)||(21969-22076)
scaffold0242 (218-259)||(13019-13060)
scaffold0242 (218-259)||(21854-21895)
[»] scaffold0230 (1 HSPs)
scaffold0230 (52-150)||(26604-26702)
[»] scaffold0005 (3 HSPs)
scaffold0005 (42-152)||(240505-240615)
scaffold0005 (29-156)||(221996-222124)
scaffold0005 (214-259)||(221895-221940)
[»] scaffold0011 (1 HSPs)
scaffold0011 (34-152)||(250108-250227)
[»] scaffold0312 (1 HSPs)
scaffold0312 (42-152)||(5910-6020)
[»] scaffold0164 (2 HSPs)
scaffold0164 (53-131)||(7156-7234)
scaffold0164 (53-131)||(15037-15115)
[»] scaffold0024 (1 HSPs)
scaffold0024 (29-151)||(110045-110168)
[»] scaffold0938 (2 HSPs)
scaffold0938 (32-152)||(408-530)
scaffold0938 (218-255)||(599-636)
[»] scaffold0062 (4 HSPs)
scaffold0062 (32-152)||(23922-24044)
scaffold0062 (32-152)||(34090-34212)
scaffold0062 (218-255)||(23816-23853)
scaffold0062 (218-255)||(33984-34021)


Alignment Details
Target: chr2 (Bit Score: 101; Significance: 4e-50; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 20 - 156
Target Start/End: Complemental strand, 39767302 - 39767166
Alignment:
Q  20 cattccccgtacccgcgtttgtaaaaattcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaag 119  Q
    |||||||| ||||||||||||||||||||| ||||||||||| |||||||| || |||||||| ||||||||  ||||||||||||||| ||||||||||    
T  39767302 cattccccatacccgcgtttgtaaaaattctcgtacccgagctcgtactcttgtaggaaacaactttagtactcttcctcataccctataggcacctaag 39767203  T
Q  120 tgctcatacctgtacccattacccacactttaattat 156  Q
    |||||||||||||||||||||||||||||||||||||    
T  39767202 tgctcatacctgtacccattacccacactttaattat 39767166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 29 - 154
Target Start/End: Complemental strand, 41935688 - 41935562
Alignment:
Q  29 tacccgcgtttgtaaaaattccc-gtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcata 127  Q
    |||||||||||||||||| |  | ||||||| | |||||| |||||||| ||||| ||||||  | ||||||||||||||||||||||||||||||||||    
T  41935688 tacccgcgtttgtaaaaaatatctgtacccgggtccgtaccctcgtgggcaacaactttagtgtccttcctcataccctatgggcacctaagtgctcata 41935589  T
Q  128 cctgtacccattacccacactttaatt 154  Q
    || | |||||||||||||| |||||||    
T  41935588 cccgcacccattacccacagtttaatt 41935562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 33 - 151
Target Start/End: Original strand, 15234255 - 15234374
Alignment:
Q  33 cgcgtttgtaaaaattc-ccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctg 131  Q
    |||||||||||||| |  ||||||||||||||||||||||||||| ||||| ||||||||| | |||||||||||||||||||  |||||||||| || |    
T  15234255 cgcgtttgtaaaaaatgtccgtacccgagcccgtactctcgtgggcaacaactttagtaccctacctcataccctatgggcacaaaagtgctcattcccg 15234354  T
Q  132 tacccattacccacacttta 151  Q
     ||||| ||||| |||||||    
T  15234355 cacccaatacccgcacttta 15234374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 23 - 151
Target Start/End: Original strand, 35048558 - 35048687
Alignment:
Q  23 tccccgtacccgcgtttgtaaaaattcc-cgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtg 121  Q
    ||||| |||||||||||||||||| | | |||||||| |||||||| |||||||| ||||| |||||| || |||| |||| ||||||||||| ||||||    
T  35048558 tccccatacccgcgtttgtaaaaaatgctcgtacccgtgcccgtaccctcgtgggcaacaactttagtgcccttccccatatcctatgggcacttaagtg 35048657  T
Q  122 ctcatacctgtacccattacccacacttta 151  Q
    | |||||| | ||||||||||| |||||||    
T  35048658 cccatacccgcacccattacccgcacttta 35048687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 50 - 150
Target Start/End: Original strand, 4289603 - 4289703
Alignment:
Q  50 ccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacactt 149  Q
    |||||||||||||||||| |||||||| ||||| |||| | || |||| |||||||||||||||| ||||||||||||||   ||||||||||| |||||    
T  4289603 ccgtacccgagcccgtaccctcgtgggcaacaactttaatgcccttccccataccctatgggcacttaagtgctcatacccccacccattacccgcactt 4289702  T
Q  150 t 150  Q
    |    
T  4289703 t 4289703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 42 - 152
Target Start/End: Original strand, 3329146 - 3329256
Alignment:
Q  42 aaaaattcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattac 141  Q
    |||||| |||||||||  |||||||| |||||||| ||||| |||||| ||||||| ||||| ||||||| |||||||||   ||||| | |||||||||    
T  3329146 aaaaatacccgtacccatgcccgtaccctcgtgggcaacaactttagtccctttccccatactctatgggtacctaagtgtctatacccgcacccattac 3329245  T
Q  142 ccacactttaa 152  Q
    |||||||||||    
T  3329246 ccacactttaa 3329256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 149
Target Start/End: Original strand, 15161922 - 15162049
Alignment:
Q  23 tccccgtacccgcgtttgtaaaaattc-ccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtg 121  Q
    ||||| || ||||||||||||||| |  ||||||||| ||| || | |||||||| ||||| |||||| || ||||  ||||||||||||||| ||||||    
T  15161922 tccccatatccgcgtttgtaaaaaatgtccgtacccgtgcctgttccctcgtgggcaacaactttagtgcccttccctataccctatgggcacttaagtg 15162021  T
Q  122 ctcatacctgtacccattacccacactt 149  Q
    | |||||| | |||||||||||||||||    
T  15162022 cccatacccgcacccattacccacactt 15162049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 42 - 152
Target Start/End: Complemental strand, 31440785 - 31440675
Alignment:
Q  42 aaaaattcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattac 141  Q
    |||||| |||||||||| |||||||| |||||||| || || |||||| || |||  ||||||||||| | |||||||||| |||||| | |||||||||    
T  31440785 aaaaatacccgtacccgtgcccgtaccctcgtgggcaataactttagtccccttctccataccctatgtgtacctaagtgcccatacccgcacccattac 31440686  T
Q  142 ccacactttaa 152  Q
    || ||||||||    
T  31440685 ccgcactttaa 31440675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 140
Target Start/End: Complemental strand, 16711514 - 16711394
Alignment:
Q  22 ttccccgtacccgcgtttgtaaaaa--ttcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaag 119  Q
    |||||| ||||||||||||||||||  | | ||||||||| ||| ||| |||||||  |||||||||| |  | |||||||||||||||| |||| ||||    
T  16711514 ttccccctacccgcgtttgtaaaaaaatactcgtacccgaacccataccctcgtggacaacaattttaatgtccttcctcataccctatgagcacttaag 16711415  T
Q  120 tgctcatacctgtacccatta 140  Q
    ||| |||||| ||||||||||    
T  16711414 tgcccatacccgtacccatta 16711394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 51 - 152
Target Start/End: Complemental strand, 32422881 - 32422780
Alignment:
Q  51 cgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacacttt 150  Q
    |||||||| |||||||| |||||||| ||||| |||||| || |||| ||||||||||||| || ||||| | |||||| | ||||||||||| ||||||    
T  32422881 cgtacccgtgcccgtaccctcgtgggcaacaactttagtccccttccccataccctatgggtacttaagtacccatacccgcacccattacccgcacttt 32422782  T
Q  151 aa 152  Q
    ||    
T  32422781 aa 32422780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 214 - 259
Target Start/End: Complemental strand, 39767111 - 39767066
Alignment:
Q  214 aaagcaactcataaaatagtagaaatcgtagtatttagccaaataa 259  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  39767111 aaagcaactcataaaatagtagaaatcgtagtatttagccaaataa 39767066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 129
Target Start/End: Complemental strand, 44070554 - 44070467
Alignment:
Q  42 aaaaattcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacc 129  Q
    |||||| |||||||||| |||||||| |||||||| ||||| |||||| || || | ||||||||||||| |||||||||| ||||||    
T  44070554 aaaaatacccgtacccgtgcccgtaccctcgtgggcaacaactttagtcccctttcccataccctatgggtacctaagtgcccatacc 44070467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 152
Target Start/End: Original strand, 25424717 - 25424819
Alignment:
Q  50 ccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacactt 149  Q
    ||||||||| |||||||| |||||||| ||||| |||||| || |||| ||||||||||||| || || || | |||||| | ||||||||||| |||||    
T  25424717 ccgtacccgtgcccgtaccctcgtgggcaacaactttagtccccttccccataccctatgggtacttaggtacccatacccgcacccattacccgcactt 25424816  T
Q  150 taa 152  Q
    |||    
T  25424817 taa 25424819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 152
Target Start/End: Complemental strand, 29546265 - 29546135
Alignment:
Q  23 tccccgtacccgcgtttgtaaaaatt-cccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtg 121  Q
    ||||| ||||| |||||||||||| | ||||||||||  ||||||  |||||||| ||||| || | | || |||| |||||||||||||||||||||||    
T  29546265 tccccatacccacgtttgtaaaaaatacccgtacccggacccgtatcctcgtgggcaacaacttcattgcccttccccataccctatgggcacctaagtg 29546166  T
Q  122 ctcatacctgtacccattacccacactttaa 152  Q
      |||||| | ||||||||||| || |||||    
T  29546165 tccatacccgcacccattacccgcattttaa 29546135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 152
Target Start/End: Complemental strand, 33867687 - 33867585
Alignment:
Q  50 ccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacactt 149  Q
    ||||||||| |||||||| |||||||| ||||| |||||| || |||| ||||||||||||| || || || | |||||| | ||||||||||| |||||    
T  33867687 ccgtacccgtgcccgtaccctcgtgggcaacaactttagtccccttccccataccctatgggtacttaggtacccatacccgcacccattacccgcactt 33867588  T
Q  150 taa 152  Q
    |||    
T  33867587 taa 33867585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 61 - 152
Target Start/End: Original strand, 4481030 - 4481121
Alignment:
Q  61 cccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacactttaa 152  Q
    ||||||| |||||||| ||||| |||||| || |||| ||||||||||||| || ||||||  |||||| | ||||||||||| ||||||||    
T  4481030 cccgtaccctcgtgggcaacaactttagtccccttccccataccctatgggtacttaagtgtccatacccgcacccattacccgcactttaa 4481121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 129
Target Start/End: Original strand, 11788559 - 11788665
Alignment:
Q  23 tccccgtacccgcgtttgtaaaaattcc-cgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtg 121  Q
    ||||| |||||||||||||||||| | | | |||||| |||||||| |||||||| |||||||||||| || |||| || ||||||||||| | ||||||    
T  11788559 tccccatacccgcgtttgtaaaaagtgcgcatacccgtgcccgtaccctcgtgggcaacaattttagtgcccttcc-cagaccctatgggcccttaagtg 11788657  T
Q  122 ctcatacc 129  Q
    | ||||||    
T  11788658 cccatacc 11788665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 61 - 152
Target Start/End: Original strand, 23231705 - 23231796
Alignment:
Q  61 cccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacactttaa 152  Q
    ||||||| |||||||| ||||| | |||| || |||| ||||||||||||| || ||||||| |||||| | ||||||||||| ||||||||    
T  23231705 cccgtaccctcgtgggcaacaactgtagtccccttccccataccctatgggtacttaagtgcccatacccgcacccattacccgcactttaa 23231796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 143
Target Start/End: Complemental strand, 8027622 - 8027500
Alignment:
Q  23 tccccgtacccgcgttt-gtaaaaattc-ccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagt 120  Q
    ||||| ||||||||||| ||||||| |  ||||||||| |||||||| |||||||  ||||| |||||| || || | |||||||||||||||| |||||    
T  8027622 tccccatacccgcgttttgtaaaaaatgtccgtacccgtgcccgtacactcgtggacaacaactttagtgccctttcccataccctatgggcacttaagt 8027523  T
Q  121 gctcatacctgtacccattaccc 143  Q
     | |||||| | |||||||||||    
T  8027522 acccatacccgcacccattaccc 8027500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 42 - 152
Target Start/End: Original strand, 38620347 - 38620457
Alignment:
Q  42 aaaaattcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattac 141  Q
    |||||| |||||||||| |||| ||| ||| |||| ||||| |||||| || |||| ||||||||||||| || |||||   |||||| | |||||||||    
T  38620347 aaaaatacccgtacccgtgcccataccctcatgggcaacaactttagtccccttccccataccctatgggtacttaagtatccatacccgcacccattac 38620446  T
Q  142 ccacactttaa 152  Q
    || ||||||||    
T  38620447 ccgcactttaa 38620457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 87
Target Start/End: Complemental strand, 44928857 - 44928791
Alignment:
Q  22 ttccccgtacccgcgtttgta-aaaattcccgtacccgagcccgtactctcgtgggaaacaatttta 87  Q
    ||||||||||||||||||||| |||||  |||||||||| ||| ||| |||||||| ||||||||||    
T  44928857 ttccccgtacccgcgtttgtaaaaaatgtccgtacccgaacccataccctcgtgggcaacaatttta 44928791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 29 - 121
Target Start/End: Original strand, 2656739 - 2656832
Alignment:
Q  29 tacccgcgtttgtaaaaatt-cccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtg 121  Q
    ||||| |||||||||||| | ||| ||| ||||||| ||| |||||||| ||||| ||||||  | |||| ||||||||||||| || ||||||    
T  2656739 tacccacgtttgtaaaaaatgcccatactcgagcccataccctcgtgggcaacaactttagtgtccttccccataccctatgggtacttaagtg 2656832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 259
Target Start/End: Original strand, 2656927 - 2656968
Alignment:
Q  218 caactcataaaatagtagaaatcgtagtatttagccaaataa 259  Q
    ||||| |||||||||||  |||||||||||||||||||||||    
T  2656927 caactaataaaatagtatgaatcgtagtatttagccaaataa 2656968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 29 - 153
Target Start/End: Complemental strand, 29221353 - 29221228
Alignment:
Q  29 tacccgcgtttgtaaaaatt-cccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcata 127  Q
    ||||||| |||||||||| | ||||||||||| ||| ||| | |||||| |||||||||| | ||  ||| ||| ||||||||||| |||| ||| | ||    
T  29221353 tacccgcatttgtaaaaaatgcccgtacccgaacccatacccccgtgggcaacaattttactgcccgtccccatgccctatgggcatctaaatgcccgta 29221254  T
Q  128 cctgtacccattacccacactttaat 153  Q
    |  |  |||||||||| |||||||||    
T  29221253 ctcgcgcccattacccgcactttaat 29221228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 29 - 153
Target Start/End: Complemental strand, 29334652 - 29334527
Alignment:
Q  29 tacccgcgtttgtaaaaatt-cccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcata 127  Q
    ||||||| |||||||||| | ||||||||||| ||| ||| | |||||| |||||||||| | ||  ||| ||| ||||||||||| |||| ||| | ||    
T  29334652 tacccgcatttgtaaaaaatgcccgtacccgaacccatacccccgtgggcaacaattttactgcccgtccccatgccctatgggcatctaaatgcccgta 29334553  T
Q  128 cctgtacccattacccacactttaat 153  Q
    |  |  |||||||||| |||||||||    
T  29334552 ctcgcgcccattacccgcactttaat 29334527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 99 - 152
Target Start/End: Original strand, 30241441 - 30241494
Alignment:
Q  99 cataccctatgggcacctaagtgctcatacctgtacccattacccacactttaa 152  Q
    ||||||||||||| |||||||||| |||||  | ||||||||||| ||||||||    
T  30241441 cataccctatgggtacctaagtgcccatactcgcacccattacccgcactttaa 30241494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 84; Significance: 5e-40; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 22 - 156
Target Start/End: Original strand, 27064125 - 27064260
Alignment:
Q  22 ttccccgtacccgcgtttgtaaaaatt-cccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagt 120  Q
    |||||| |||||||||||||||||| | ||||| ||||||||||||| |||||||| ||||| |||||| | ||||||||||||||||||||||||||||    
T  27064125 ttccccatacccgcgtttgtaaaaaatgcccgtgcccgagcccgtacactcgtgggtaacaactttagtgcatttcctcataccctatgggcacctaagt 27064224  T
Q  121 gctcatacctgtacccattacccacactttaattat 156  Q
    || || ||| ||||||||||||||||||||||||||    
T  27064225 gcccacacccgtacccattacccacactttaattat 27064260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 50 - 150
Target Start/End: Complemental strand, 45079351 - 45079251
Alignment:
Q  50 ccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacactt 149  Q
    |||||||||||||||||| |||||||| ||||| |||||| || |||| |||||||||||||||| ||||||| |||||| | ||||||||||| |||||    
T  45079351 ccgtacccgagcccgtaccctcgtgggcaacaactttagtgcccttccccataccctatgggcacttaagtgcccatacccgcacccattacccgcactt 45079252  T
Q  150 t 150  Q
    |    
T  45079251 t 45079251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 129
Target Start/End: Complemental strand, 26795429 - 26795320
Alignment:
Q  22 ttccccgtacccgcgtttgtaaaaa--ttcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaag 119  Q
    |||||| |||||| |||||||||||  |  | |||||||||||||||| |||||||| ||||| || ||| || || |||||||||||||||||||||||    
T  26795429 ttccccatacccgtgtttgtaaaaaaatgtcagtacccgagcccgtaccctcgtgggtaacaacttcagtgccctttctcataccctatgggcacctaag 26795330  T
Q  120 tgctcatacc 129  Q
    ||||||||||    
T  26795329 tgctcatacc 26795320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 23 - 151
Target Start/End: Original strand, 49374727 - 49374856
Alignment:
Q  23 tccccgtacccgcgtttgtaaaaatt-cccgtacccgagcccgtactctcgtgggaaacaattttagt-acctttcctcataccctatgggcacctaagt 120  Q
    ||||| |||||| ||||||||||| | |||||| ||| |||||||  |||||||  ||||||||||||  ||||||| |||||||||||||||| |||||    
T  49374727 tccccatacccgtgtttgtaaaaaatacccgtatccgtgcccgtatcctcgtggacaacaattttagtgtcctttcc-cataccctatgggcacttaagt 49374825  T
Q  121 gctcatacctgtacccattacccacacttta 151  Q
    ||||||||| | ||||||||||| |||||||    
T  49374826 gctcatacccgcacccattacccgcacttta 49374856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 29 - 156
Target Start/End: Complemental strand, 2013220 - 2013094
Alignment:
Q  29 tacccgcgtttgtaa-aaattcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcata 127  Q
    ||||||||||||||| ||||  | |||||||||||||||| ||| |||| ||||| ||||||||| ||||  ||||| |||||| | |||||||| ||||    
T  2013220 tacccgcgtttgtaagaaatgtctgtacccgagcccgtaccctcatgggtaacaactttagtacccttcc--ataccttatgggaatctaagtgcccata 2013123  T
Q  128 cctgtacccattacccacactttaattat 156  Q
      ||||||||||| |||||||||||||||    
T  2013122 tatgtacccattatccacactttaattat 2013094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 42 - 152
Target Start/End: Original strand, 6408528 - 6408638
Alignment:
Q  42 aaaaattcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattac 141  Q
    |||||| |||||||||| |||| ||| |||||||| ||||| |||||| |  |||| | ||||||||||| |||||||||| |||||| | |||||||||    
T  6408528 aaaaatacccgtacccgtgcccctaccctcgtgggcaacaactttagtcctcttccccgtaccctatgggtacctaagtgcccatacccgcacccattac 6408627  T
Q  142 ccacactttaa 152  Q
    || ||||||||    
T  6408628 ccgcactttaa 6408638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 50 - 152
Target Start/End: Original strand, 19618647 - 19618749
Alignment:
Q  50 ccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacactt 149  Q
    ||||||||| || ||||| |||||||| ||||| |||||| || |||| ||||||||||||  |||||||||| |||||| | ||||||||||| |||||    
T  19618647 ccgtacccgtgctcgtaccctcgtgggcaacaactttagttcccttccccataccctatggatacctaagtgcccatacccgcacccattacccgcactt 19618746  T
Q  150 taa 152  Q
    |||    
T  19618747 taa 19618749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 42 - 152
Target Start/End: Complemental strand, 44792796 - 44792686
Alignment:
Q  42 aaaaattcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattac 141  Q
    |||||| |||||| ||| |||||||| |||||||| ||||| |||||| || |||| ||||||||||||| || ||||| | |||||| | |||||||||    
T  44792796 aaaaatacccgtatccgtgcccgtaccctcgtgggcaacaactttagtccccttccccataccctatgggtacttaagtacccatacccgcacccattac 44792697  T
Q  142 ccacactttaa 152  Q
    || ||||||||    
T  44792696 ccgcactttaa 44792686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 50 - 152
Target Start/End: Original strand, 48583692 - 48583793
Alignment:
Q  50 ccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacactt 149  Q
    |||||||||||||||||| |||||||| ||||| ||| || || |||| |||||||||||||||| ||||||| |||||||| |  |||||||| |||||    
T  48583692 ccgtacccgagcccgtaccctcgtgggcaacaacttt-gtgcccttccccataccctatgggcacttaagtgcacatacctgcagtcattacccgcactt 48583790  T
Q  150 taa 152  Q
    |||    
T  48583791 taa 48583793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 151
Target Start/End: Original strand, 32995168 - 32995297
Alignment:
Q  23 tccccgtacccgcgtttgtaaaaattcc-cgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtg 121  Q
    ||||| |||| ||||||||||||| |   ||||| || |||||||| |||||||  ||||| ||||||  | |||| |||||||||||||||| ||||||    
T  32995168 tccccatacctgcgtttgtaaaaaatgttcgtactcgtgcccgtaccctcgtggacaacaactttagtgtccttccacataccctatgggcacttaagtg 32995267  T
Q  122 ctcatacctgtacccattacccacacttta 151  Q
    |||||||| | ||||||||||| |||||||    
T  32995268 ctcatacccgcacccattacccgcacttta 32995297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 42096885 - 42096788
Alignment:
Q  53 tacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacacttt 150  Q
    |||||||||||||||  ||||||  ||||| |||||| || |||| |||||||||||||||| ||||||| |||||| | ||||||||||| ||||||    
T  42096885 tacccgagcccgtaccttcgtggacaacaactttagtgcccttccccataccctatgggcacttaagtgcccatacccgcacccattacccgcacttt 42096788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 150
Target Start/End: Complemental strand, 30248207 - 30248100
Alignment:
Q  42 aaaaattcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattac 141  Q
    |||||| ||||||||| || |||||| |||||||| ||||| |||||| || |||| |||||||||||||||  ||||||| |||||| | |||||||||    
T  30248207 aaaaatgcccgtacccaagtccgtaccctcgtgggcaacaactttagtgcccttccccataccctatgggcaattaagtgcccatacc-gcacccattac 30248109  T
Q  142 ccacacttt 150  Q
    || ||||||    
T  30248108 ccgcacttt 30248100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 151
Target Start/End: Original strand, 35732179 - 35732299
Alignment:
Q  32 ccgcgtttgtaaaaattccc-gtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacct 130  Q
    ||||||||||||||| |  | ||| ||| |||||||| |||||||| ||||||||||||  | |||| || ||||||||||||| ||||||| ||||||     
T  35732179 ccgcgtttgtaaaaaatgactgtatccgtgcccgtaccctcgtgggcaacaattttagtgtccttccccagaccctatgggcacttaagtgcccataccc 35732278  T
Q  131 gtacccattacccacacttta 151  Q
    | || ||||||||||||||||    
T  35732279 gcactcattacccacacttta 35732299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 34 - 152
Target Start/End: Original strand, 19454730 - 19454849
Alignment:
Q  34 gcgtttgtaaaaattcc-cgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgt 132  Q
    ||||||||||||| | | ||||||||  | ||||| |||||||| ||||| ||||||||| |||| ||||| |||||||||| ||||||  |||| |||     
T  19454730 gcgtttgtaaaaaatgctcgtacccggactcgtaccctcgtgggcaacaactttagtacccttccccatactctatgggcacttaagtgtccatatctgc 19454829  T
Q  133 acccattacccacactttaa 152  Q
    |||||||||||||| |||||    
T  19454830 acccattacccacattttaa 19454849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 152
Target Start/End: Complemental strand, 23299694 - 23299564
Alignment:
Q  23 tccccgtacccgcgtttgtaaaaattc-ccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtg 121  Q
    ||||| ||||||| ||| ||||||||  ||||||||| |||||||| || ||||| ||||| ||||||  | |||| ||||||||||||| | |||||||    
T  23299694 tccccatacccgcatttttaaaaattatccgtacccgtgcccgtacccttgtgggcaacaactttagtgtcattccccataccctatgggtatctaagtg 23299595  T
Q  122 ctcatacctgtacccattacccacactttaa 152  Q
    | |||||| | ||||||||||| || |||||    
T  23299594 cccatacccgcacccattacccgcattttaa 23299564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 152
Target Start/End: Complemental strand, 24987560 - 24987450
Alignment:
Q  42 aaaaattcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattac 141  Q
    |||||| ||||| |||| |||||||| |||||||| ||||| |||||| || |||| ||||||||||||| || ||||| | |||||| | | |||||||    
T  24987560 aaaaatacccgtgcccgtgcccgtaccctcgtgggcaacaactttagtccccttccccataccctatgggtacttaagtacccatacccgcatccattac 24987461  T
Q  142 ccacactttaa 152  Q
    || ||||||||    
T  24987460 ccgcactttaa 24987450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 52 - 150
Target Start/End: Complemental strand, 41410401 - 41410303
Alignment:
Q  52 gtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacacttt 150  Q
    ||||||||| |||||| |||||||| ||||| |||||| || ||||  | |||||||| |||||||||||| |||||| | || |||||||||||||||    
T  41410401 gtacccgagtccgtaccctcgtgggcaacaactttagtgcccttccctacaccctatgagcacctaagtgcccatacccgcacgcattacccacacttt 41410303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 152
Target Start/End: Original strand, 49359916 - 49360026
Alignment:
Q  42 aaaaattcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattac 141  Q
    |||||| |||||| ||| | |||||| |||||||| ||||| |||||| || |||| ||||||||||||| |||| ||| | |||||| | |||||||||    
T  49359916 aaaaatacccgtatccgtgtccgtaccctcgtgggcaacaactttagtccccttccccataccctatgggtacctcagtacccatacccgcacccattac 49360015  T
Q  142 ccacactttaa 152  Q
    || ||||||||    
T  49360016 ccgcactttaa 49360026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 214 - 259
Target Start/End: Complemental strand, 2013038 - 2012993
Alignment:
Q  214 aaagcaactcataaaatagtagaaatcgtagtatttagccaaataa 259  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||    
T  2013038 aaagcaactcataaaatagtagaaatcgtagtattaagccaaataa 2012993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 152
Target Start/End: Original strand, 51055423 - 51055523
Alignment:
Q  52 gtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacacttta 151  Q
    |||||||||| ||||  || ||||| ||||| ||||||  | |||||||||||||||| |||||||||||| |||||||| | |||||| || |||||||    
T  51055423 gtacccgagctcgtatccttgtgggcaacaactttagtggcattcctcataccctatgagcacctaagtgcacatacctgcatccattatccgcacttta 51055522  T
Q  152 a 152  Q
    |    
T  51055523 a 51055523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 53 - 156
Target Start/End: Complemental strand, 2150821 - 2150718
Alignment:
Q  53 tacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacactttaa 152  Q
    ||||||||||||||  ||||||||  ||||||||||| || | || |||||  |||||||||||||| || |||| | ||||||||||| | ||||||||    
T  2150821 tacccgagcccgtatcctcgtgggtgacaattttagtgccataccccatactttatgggcacctaagggcccatagccgtacccattactcgcactttaa 2150722  T
Q  153 ttat 156  Q
    ||||    
T  2150721 ttat 2150718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 29 - 151
Target Start/End: Complemental strand, 10085428 - 10085305
Alignment:
Q  29 tacccgcgtttgtaaaaattccc-gtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcata 127  Q
    |||||||||||||||||| |  | ||| ||| |||| ||| |||||||| ||||| |||||| || |||| ||||||||||||| || ||||||||||||    
T  10085428 tacccgcgtttgtaaaaaatgtctgtatccgtgcccataccctcgtgggcaacaactttagtgcccttccccataccctatgggtacttaagtgctcata 10085329  T
Q  128 cctgtacccattacccacacttta 151  Q
    ||   ||| ||||||| |||||||    
T  10085328 ccctcacctattacccgcacttta 10085305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 29 - 151
Target Start/End: Complemental strand, 10192348 - 10192225
Alignment:
Q  29 tacccgcgtttgtaaaaattccc-gtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcata 127  Q
    |||||||||||||||||| |  | ||| ||| |||| ||| |||||||| ||||| |||||| || |||| ||||||||||||| || ||||||||||||    
T  10192348 tacccgcgtttgtaaaaaatgtctgtatccgtgcccataccctcgtgggcaacaactttagtgcccttccccataccctatgggtacttaagtgctcata 10192249  T
Q  128 cctgtacccattacccacacttta 151  Q
    ||   ||| ||||||| |||||||    
T  10192248 ccctcacctattacccgcacttta 10192225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 151
Target Start/End: Original strand, 5908165 - 5908294
Alignment:
Q  23 tccccgtacccgcgtttgt-aaaaattcccgtacccgagcccgtactctcgtgggaaacaattttagt-acctttcctcataccctatgggcacctaagt 120  Q
    ||||| ||||||||||||| |||||| ||| |||| | |||||||| |||||||| ||||| ||||||  |||||||| |||||||||| |||| |||||    
T  5908165 tccccatacccgcgtttgtaaaaaatgcccatacctgtgcccgtaccctcgtgggcaacaactttagtgccctttcct-ataccctatgagcacttaagt 5908263  T
Q  121 gctcatacctgtacccattacccacacttta 151  Q
    || ||||||   ||| ||||||| |||||||    
T  5908264 gcccatacccacaccaattacccgcacttta 5908294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 94 - 156
Target Start/End: Complemental strand, 9163099 - 9163037
Alignment:
Q  94 ttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacactttaattat 156  Q
    |||| |||||||||||||||||||||||| |||||| ||||  |||||| |||||||||||||    
T  9163099 ttccccataccctatgggcacctaagtgcccatacccgtacttattaccaacactttaattat 9163037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 152
Target Start/End: Original strand, 25467420 - 25467550
Alignment:
Q  23 tccccgtacccgcgtttgtaaaaatt-cccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtg 121  Q
    ||||| || |||| ||| |||||||| |||| ||||| |||| ||| |||||||| ||||| |||||| || |||| |||| | |||||| | |||||||    
T  25467420 tccccatatccgcatttttaaaaattacccgcacccgtgcccataccctcgtgggcaacaactttagtgcccttccccatatcttatgggtatctaagtg 25467519  T
Q  122 ctcatacctgtacccattacccacactttaa 152  Q
    |||||||| | ||||||||||| || |||||    
T  25467520 ctcatacccgcacccattacccgcaatttaa 25467550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 78 - 156
Target Start/End: Original strand, 33118688 - 33118766
Alignment:
Q  78 aacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacactttaattat 156  Q
    ||||||||||||  ||||  ||||||||||||| ||||||||||  ||||||  |||||||||||| ||||||||||||    
T  33118688 aacaattttagtgtcttttttcataccctatggacacctaagtgtccatacccatacccattacccgcactttaattat 33118766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 152
Target Start/End: Original strand, 35688276 - 35688366
Alignment:
Q  62 ccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacactttaa 152  Q
    |||||| || ||||| ||||| |||||| || |||| |||| ||||||||||||||||||| |||||| | ||||||||||| || |||||    
T  35688276 ccgtacccttgtgggcaacaactttagtgcccttccccatatcctatgggcacctaagtgcccatacccgcacccattacccgcattttaa 35688366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 65 - 151
Target Start/End: Original strand, 46819137 - 46819223
Alignment:
Q  65 tactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacacttta 151  Q
    |||||||||||| ||||| |||||| || |||  |||||||| |||| |||||||||||||||||   ||| |||||||||||||||    
T  46819137 tactctcgtgggtaacaactttagtgcccttctccataccctgtgggtacctaagtgctcataccctcacctattacccacacttta 46819223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 214 - 259
Target Start/End: Complemental strand, 9162981 - 9162936
Alignment:
Q  214 aaagcaactcataaaatagtagaaatcgtagtatttagccaaataa 259  Q
    ||||| |||||||||||||||||||||||||||||||||| |||||    
T  9162981 aaagctactcataaaatagtagaaatcgtagtatttagccgaataa 9162936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 151
Target Start/End: Complemental strand, 6083686 - 6083587
Alignment:
Q  52 gtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacacttta 151  Q
    ||||||||| || ||| || ||||| ||| |  |||||||| || | ||||||||||||| ||||||||||||||| || |||| ||||||| |||||||    
T  6083686 gtacccgagtccatacccttgtgggcaactaccttagtaccatttcccataccctatgggtacctaagtgctcatatctatacctattacccgcacttta 6083587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 129
Target Start/End: Original strand, 27346543 - 27346622
Alignment:
Q  50 ccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacc 129  Q
    |||||||||||||||||| |||| ||| ||||| |||||| ||||||| |||| |||||||| |  ||||||| ||||||    
T  27346543 ccgtacccgagcccgtaccctcgagggcaacaactttagtgcctttccccatatcctatgggtaattaagtgcccatacc 27346622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 152
Target Start/End: Original strand, 39352442 - 39352525
Alignment:
Q  69 ctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacactttaa 152  Q
    |||||||| ||||| |||||| || |||| ||||||||||| | |||||||||| ||||||   ||||||||||| ||||||||    
T  39352442 ctcgtgggcaacaactttagtccccttccccataccctatgagtacctaagtgcccatacccacacccattacccgcactttaa 39352525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 129
Target Start/End: Original strand, 43657202 - 43657309
Alignment:
Q  23 tccccgtacccgcgtttgt-aaaaattcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtg 121  Q
    ||||| ||||| ||||||| |||||| ||||||| || ||| |||| |||||||| ||||| |||| | || |||| |||||||||| ||||| ||||||    
T  43657202 tccccatacccacgtttgtaaaaaatgcccgtactcgtgcctgtaccctcgtgggcaacaactttattgcccttccccataccctataggcacttaagtg 43657301  T
Q  122 ctcatacc 129  Q
    | ||||||    
T  43657302 cccatacc 43657309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 152
Target Start/End: Complemental strand, 50508998 - 50508915
Alignment:
Q  69 ctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacactttaa 152  Q
    |||||||  ||||| |||||| || || ||||||||||||||| || ||||||| |||||||| ||||| ||||| ||||||||    
T  50508998 ctcgtggacaacaactttagtgccctttctcataccctatgggaacttaagtgcccatacctgcacccactacccgcactttaa 50508915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 42 - 152
Target Start/End: Complemental strand, 13735780 - 13735670
Alignment:
Q  42 aaaaattcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattac 141  Q
    |||||| ||| |||||| |||||||  |||||||| ||||| |||| | || |||| ||||||||||||| |||| |||||  ||||| | |||||||||    
T  13735780 aaaaatacccttacccgtgcccgtatcctcgtgggcaacaactttaatccccttccccataccctatgggtacctcagtgccgatacccgcacccattac 13735681  T
Q  142 ccacactttaa 152  Q
     | ||||||||    
T  13735680 tcgcactttaa 13735670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 26787577 - 26787536
Alignment:
Q  218 caactcataaaatagtagaaatcgtagtatttagccaaataa 259  Q
    ||||||||||||||| ||||||||||||||||| ||||||||    
T  26787577 caactcataaaatagcagaaatcgtagtatttaaccaaataa 26787536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 259
Target Start/End: Original strand, 27064316 - 27064361
Alignment:
Q  214 aaagcaactcataaaatagtagaaatcgtagtatttagccaaataa 259  Q
    ||||||||||||||||||| |||||||| |||||||| ||||||||    
T  27064316 aaagcaactcataaaatagcagaaatcgaagtatttatccaaataa 27064361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 259
Target Start/End: Original strand, 27346695 - 27346736
Alignment:
Q  218 caactcataaaatagtagaaatcgtagtatttagccaaataa 259  Q
    ||||| ||||||||||| ||||||||||||||||||||||||    
T  27346695 caactaataaaatagtataaatcgtagtatttagccaaataa 27346736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 259
Target Start/End: Original strand, 33119015 - 33119060
Alignment:
Q  214 aaagcaactcataaaatagtagaaatcgtagtatttagccaaataa 259  Q
    |||||||||| |||||||||||||||| || |||||||||||||||    
T  33119015 aaagcaactcgtaaaatagtagaaatcataatatttagccaaataa 33119060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 151
Target Start/End: Complemental strand, 38694967 - 38694858
Alignment:
Q  42 aaaaattcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattac 141  Q
    |||||| || ||||||| | |||||| |||||||| || || |||||| || |||| |||||||||||| ||| ||||||  |||||| | || ||||||    
T  38694967 aaaaatgcctgtacccgtgtccgtaccctcgtgggcaaaaactttagtgcccttccccataccctatggacacttaagtgtccatacccgcactcattac 38694868  T
Q  142 ccacacttta 151  Q
    || |||||||    
T  38694867 ccgcacttta 38694858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 140
Target Start/End: Original strand, 40563873 - 40563991
Alignment:
Q  23 tccccgtacccgcgtttgtaaaaatt-cccgtacccgagcccgtactctc-gtgggaaacaattttagtacctttcctcataccctatgggcacctaagt 120  Q
    ||||| ||||||| |||||||||||| ||||||  || ||||||| |||| ||||| ||||| |||||| || |||| ||||||||||| | | ||||||    
T  40563873 tccccatacccgcatttgtaaaaattacccgtattcgtgcccgta-tctccgtgggcaacaactttagtgcccttccccataccctatgagtatctaagt 40563971  T
Q  121 gctcatacctgtacccatta 140  Q
    || |||| | ||||||||||    
T  40563972 gcccataaccgtacccatta 40563991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 152
Target Start/End: Original strand, 41923923 - 41924033
Alignment:
Q  42 aaaaattcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattac 141  Q
    |||||| |||||| ||| |  ||||| |||||||| ||||| |||||| || |||| ||||| ||||||| || ||||||   ||||| | |||||||||    
T  41923923 aaaaatacccgtatccgtgttcgtaccctcgtgggcaacaactttagtccccttccccatactctatgggtacttaagtgtctatacccgcacccattac 41924022  T
Q  142 ccacactttaa 152  Q
    || ||||||||    
T  41924023 ccgcactttaa 41924033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 2150659 - 2150618
Alignment:
Q  218 caactcataaaatagtagaaatcgtagtatttagccaaataa 259  Q
    |||||||||||||||||  ||||||||||||| |||||||||    
T  2150659 caactcataaaatagtacgaatcgtagtatttggccaaataa 2150618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 259
Target Start/End: Original strand, 19454915 - 19454956
Alignment:
Q  218 caactcataaaatagtagaaatcgtagtatttagccaaataa 259  Q
    |||||||||||||| ||  |||||||||||||||||||||||    
T  19454915 caactcataaaataatatgaatcgtagtatttagccaaataa 19454956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 28956893 - 28956852
Alignment:
Q  218 caactcataaaatagtagaaatcgtagtatttagccaaataa 259  Q
    ||||| ||||||||||||||||||||| ||| ||||||||||    
T  28956893 caacttataaaatagtagaaatcgtagcattaagccaaataa 28956852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 30248034 - 30247993
Alignment:
Q  218 caactcataaaatagtagaaatcgtagtatttagccaaataa 259  Q
    ||||| |||||||||||  |||||||||||||||||||||||    
T  30248034 caactaataaaatagtacgaatcgtagtatttagccaaataa 30247993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 259
Target Start/End: Original strand, 35688431 - 35688472
Alignment:
Q  218 caactcataaaatagtagaaatcgtagtatttagccaaataa 259  Q
    |||||||||||||| ||  |||||||||||||||||||||||    
T  35688431 caactcataaaataatatgaatcgtagtatttagccaaataa 35688472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 41410237 - 41410196
Alignment:
Q  218 caactcataaaatagtagaaatcgtagtatttagccaaataa 259  Q
    ||||| |||||||||||  |||||||||||||||||||||||    
T  41410237 caactaataaaatagtatgaatcgtagtatttagccaaataa 41410196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 152
Target Start/End: Original strand, 8340117 - 8340205
Alignment:
Q  64 gtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacactttaa 152  Q
    |||| ||||||  |||||| |||| | || |||| ||||||| |||||||||||||||| |||||| | ||| ||||||| || |||||    
T  8340117 gtaccctcgtgaaaaacaactttaatgcccttccccatacccaatgggcacctaagtgcccatacccgcacctattacccgcattttaa 8340205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 5e-31; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 29 - 156
Target Start/End: Complemental strand, 36074287 - 36074159
Alignment:
Q  29 tacccgcgtttgtaaaaatt-cccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcata 127  Q
    |||| ||||||||||||||| ||||||| || ||||||||  ||||||| ||||| |||||| || |||| |||||||||||||||||||||||| ||||    
T  36074287 tacctgcgtttgtaaaaattgcccgtactcgtgcccgtaccttcgtgggtaacaactttagtgcccttccccataccctatgggcacctaagtgcccata 36074188  T
Q  128 cctgtacccattacccacactttaattat 156  Q
    || ||||||||||||| ||||||||||||    
T  36074187 cccgtacccattacccgcactttaattat 36074159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 42 - 152
Target Start/End: Original strand, 19805003 - 19805113
Alignment:
Q  42 aaaaattcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattac 141  Q
    |||||| |||||||||| |||||||| |||||||| ||||| |||||| || |||| ||||||||||||| ||||||||||||||||| | |||||||||    
T  19805003 aaaaatacccgtacccgtgcccgtaccctcgtgggtaacaactttagtccccttccccataccctatgggtacctaagtgctcatacccgcacccattac 19805102  T
Q  142 ccacactttaa 152  Q
    || ||||||||    
T  19805103 ccgcactttaa 19805113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 23 - 152
Target Start/End: Complemental strand, 1876212 - 1876082
Alignment:
Q  23 tccccgtacccgcgtttgtaaaaattcc-cgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtg 121  Q
    ||||| |||||||||||||||||| | | ||||||||  |||||||  ||||||| ||||| |||||| || |||| |||||||||||||||||||||||    
T  1876212 tccccatacccgcgtttgtaaaaaatactcgtacccggacccgtaccatcgtgggcaacaactttagtgcccttccccataccctatgggcacctaagtg 1876113  T
Q  122 ctcatacctgtacccattacccacactttaa 152  Q
    | |||||| | ||||||||||| || |||||    
T  1876112 cccatacccgcacccattacccgcattttaa 1876082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 23 - 152
Target Start/End: Complemental strand, 28067440 - 28067310
Alignment:
Q  23 tccccgtacccgcgtttgtaaaaatt-cccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtg 121  Q
    ||||| |||||||||||||||||| | ||||||| ||||| ||||| |||||||  ||||| |||| |  |||||||||||||||||||| || ||||||    
T  28067440 tccccatacccgcgtttgtaaaaaatacccgtactcgagctcgtaccctcgtggacaacaactttaatgtctttcctcataccctatgggtacttaagtg 28067341  T
Q  122 ctcatacctgtacccattacccacactttaa 152  Q
    | |||||||| ||||||||||  ||||||||    
T  28067340 cccatacctgcacccattacctgcactttaa 28067310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 50 - 150
Target Start/End: Complemental strand, 17172360 - 17172260
Alignment:
Q  50 ccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacactt 149  Q
    |||||||||||||||||| |||||||| ||||| |||| | || |||| |||||||||||||||| ||||||||||||||   ||||||||||| |||||    
T  17172360 ccgtacccgagcccgtaccctcgtgggcaacaactttaatgcccttccccataccctatgggcacttaagtgctcatacccccacccattacccgcactt 17172261  T
Q  150 t 150  Q
    |    
T  17172260 t 17172260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 52 - 152
Target Start/End: Complemental strand, 38470058 - 38469958
Alignment:
Q  52 gtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacacttta 151  Q
    ||||||||| |||||  |||||||| ||||||||||||||| |||| ||||||| |||||||| ||||||| |||||| | ||||||||||| |||||||    
T  38470058 gtacccgagtccgtatcctcgtgggcaacaattttagtacccttccccatacccaatgggcacttaagtgcccatacccgcacccattacccgcacttta 38469959  T
Q  152 a 152  Q
    |    
T  38469958 a 38469958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 42 - 152
Target Start/End: Original strand, 27398545 - 27398655
Alignment:
Q  42 aaaaattcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattac 141  Q
    |||||| ||| |||||| |||||||| |||||||| ||||| |||||| || |||| ||||||||||||  || ||||||| |||||| | |||||||||    
T  27398545 aaaaatacccatacccgtgcccgtaccctcgtgggcaacaactttagtccccttccccataccctatggatacttaagtgcccatacccgcacccattac 27398644  T
Q  142 ccacactttaa 152  Q
    |||||||||||    
T  27398645 ccacactttaa 27398655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 50 - 150
Target Start/End: Original strand, 44300686 - 44300786
Alignment:
Q  50 ccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacactt 149  Q
    |||||||||||||||||| |||||||| ||||| |||||| || |||| |||| | ||||||||| ||||||| |||||||| |||| |||||| |||||    
T  44300686 ccgtacccgagcccgtaccctcgtgggcaacaactttagtgcccttccccatatcttatgggcacttaagtgcccatacctgcacccgttacccgcactt 44300785  T
Q  150 t 150  Q
    |    
T  44300786 t 44300786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 61 - 152
Target Start/End: Complemental strand, 5924200 - 5924109
Alignment:
Q  61 cccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacactttaa 152  Q
    ||||||| |||||||| ||||| |||||| || |||| |||||||| ||||||||||||||  |||||||| ||||||||||| ||||||||    
T  5924200 cccgtaccctcgtgggtaacaactttagtgcccttccccataccctgtgggcacctaagtgtccatacctgcacccattacccgcactttaa 5924109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 42 - 152
Target Start/End: Complemental strand, 10066408 - 10066298
Alignment:
Q  42 aaaaattcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattac 141  Q
    |||||| || ||||||| | |||||| |||||||| ||||| |||||| || |||| |||||||||| || |||||||||| |||||| | |||||||||    
T  10066408 aaaaatacctgtacccgtgtccgtaccctcgtgggcaacaactttagtccccttccccataccctataggtacctaagtgcccatacccgcacccattac 10066309  T
Q  142 ccacactttaa 152  Q
    || ||||||||    
T  10066308 ccgcactttaa 10066298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 50 - 152
Target Start/End: Original strand, 16567540 - 16567642
Alignment:
Q  50 ccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacactt 149  Q
    ||||||||| |||||||| |||||||| ||||| |||||| || |||| ||||||||||||| || ||||| | |||||| | ||||||||||| |||||    
T  16567540 ccgtacccgtgcccgtaccctcgtgggcaacaactttagtccccttccccataccctatgggtacttaagtacccatacccgcacccattacccgcactt 16567639  T
Q  150 taa 152  Q
    |||    
T  16567640 taa 16567642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 50 - 152
Target Start/End: Complemental strand, 16598122 - 16598020
Alignment:
Q  50 ccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacactt 149  Q
    ||||||||| |||||||| |||||||| ||||| |||||| || |||| ||||||||||||| || ||||| | |||||| | ||||||||||| |||||    
T  16598122 ccgtacccgtgcccgtaccctcgtgggcaacaactttagtccccttccccataccctatgggtacttaagtacccatacccgcacccattacccgcactt 16598023  T
Q  150 taa 152  Q
    |||    
T  16598022 taa 16598020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 50 - 152
Target Start/End: Original strand, 46181186 - 46181288
Alignment:
Q  50 ccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacactt 149  Q
    ||||||||| |||||||| |||||||| ||||| |||||| || |||| ||||||||||||| || ||||| | |||||| | ||||||||||| |||||    
T  46181186 ccgtacccgtgcccgtaccctcgtgggcaacaactttagtccccttccccataccctatgggtacttaagtacccatacccgcacccattacccgcactt 46181285  T
Q  150 taa 152  Q
    |||    
T  46181286 taa 46181288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 29 - 129
Target Start/End: Complemental strand, 9355325 - 9355224
Alignment:
Q  29 tacccgcgtttgtaaaaattcc-cgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcata 127  Q
    ||||| |||||||||||| | | ||||| || |||||||| |||||||| ||||| ||||||  | ||||||||||||||||||||| ||||||||||||    
T  9355325 tacccacgtttgtaaaaaatactcgtacacgtgcccgtaccctcgtgggcaacaactttagtgtccttcctcataccctatgggcacttaagtgctcata 9355226  T
Q  128 cc 129  Q
    ||    
T  9355225 cc 9355224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 121
Target Start/End: Original strand, 9223587 - 9223686
Alignment:
Q  23 tccccgtacccgcgtttgtaaaaatt-cccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtg 121  Q
    ||||| ||||| |||||||||||| | |||||||| | |||||||| |||||||| ||||| ||||||| | |||| |||||||||||||||| ||||||    
T  9223587 tccccatacccacgtttgtaaaaaatgcccgtacctgtgcccgtaccctcgtgggcaacaactttagtatcattccccataccctatgggcacttaagtg 9223686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 149
Target Start/End: Complemental strand, 34152526 - 34152399
Alignment:
Q  23 tccccgtacccgcgtttgt-aaaaattcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtg 121  Q
    ||||| ||||||||||||| ||||||  | ||||||| | | |||| |||||||| || || |||||| || |||| |||||||||||| ||| ||||||    
T  34152526 tccccatacccgcgtttgttaaaaatgtctgtacccgtgtctgtaccctcgtgggcaataactttagtgcccttccccataccctatggacacttaagtg 34152427  T
Q  122 ctcatacctgtacccattacccacactt 149  Q
    | |||||| | |||||||||||||||||    
T  34152426 cccatacccgcacccattacccacactt 34152399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 149
Target Start/End: Original strand, 34174598 - 34174725
Alignment:
Q  23 tccccgtacccgcgtttgt-aaaaattcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtg 121  Q
    ||||| ||||||||||||| ||||||  | ||||||| | | |||| |||||||| || || |||||| || |||| |||||||||||| ||| ||||||    
T  34174598 tccccatacccgcgtttgttaaaaatgtctgtacccgtgtctgtaccctcgtgggcaataactttagtgcccttccccataccctatggacacttaagtg 34174697  T
Q  122 ctcatacctgtacccattacccacactt 149  Q
    | |||||| | |||||||||||||||||    
T  34174698 cccatacccgcacccattacccacactt 34174725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 62 - 143
Target Start/End: Original strand, 45112179 - 45112260
Alignment:
Q  62 ccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattaccc 143  Q
    |||||| |||||||| || || |||||| || |||  ||||||||||||||||||||||||||||||| | |||||||||||    
T  45112179 ccgtaccctcgtgggcaataactttagtgcccttctccataccctatgggcacctaagtgctcatacccgcacccattaccc 45112260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 64 - 152
Target Start/End: Original strand, 43224305 - 43224393
Alignment:
Q  64 gtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacactttaa 152  Q
    |||| |||||||  ||||| |||||| || |||| ||||||||||||| | |||||||| |||||||| ||||||||||| ||||||||    
T  43224305 gtaccctcgtggacaacaactttagtgcccttccccataccctatgggtatctaagtgcccatacctgcacccattacccgcactttaa 43224393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 100 - 156
Target Start/End: Complemental strand, 48644591 - 48644535
Alignment:
Q  100 ataccctatgggcacctaagtgctcatacctgtacccattacccacactttaattat 156  Q
    ||||||| |||||| ||||||||||||||||||||||||||||| ||||| ||||||    
T  48644591 ataccctgtgggcatctaagtgctcatacctgtacccattacccgcacttaaattat 48644535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 69 - 152
Target Start/End: Original strand, 36072597 - 36072680
Alignment:
Q  69 ctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacactttaa 152  Q
    |||||||| ||||| |||||| || |||| |||||||||||||||||||||||| |||||| | ||| ||||||| || |||||    
T  36072597 ctcgtgggcaacaactttagtgcccttccccataccctatgggcacctaagtgcccatacccgcaccaattacccgcaatttaa 36072680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 52 - 150
Target Start/End: Complemental strand, 40789670 - 40789572
Alignment:
Q  52 gtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacacttt 150  Q
    |||||||| ||||||| |||||||  ||||| |||||| || || | |||||||||||||||| ||||||| |||||| | || |||||||| ||||||    
T  40789670 gtacccgaacccgtaccctcgtggacaacaactttagtgccctttcccataccctatgggcacttaagtgcccatacccgcactcattacccgcacttt 40789572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 152
Target Start/End: Complemental strand, 25309685 - 25309552
Alignment:
Q  20 cattccccgtacccgcgtttgta-aaaattcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaa 118  Q
    ||||| || |||||||||||||| ||||| | |||| |||| ||||||| ||||| || ||||| |||||| || |||| ||| | ||||||| | || |    
T  25309685 cattctccatacccgcgtttgtaaaaaatacacgtatccgaacccgtaccctcgtaggcaacaactttagtgcccttccacattctctatgggtatctta 25309586  T
Q  119 gtgctcatacctgtacccattacccacactttaa 152  Q
    ||| ||||||||| ||||| ||||| ||||||||    
T  25309585 gtgttcatacctgcacccactacccgcactttaa 25309552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 43702542 - 43702453
Alignment:
Q  63 cgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacactttaa 152  Q
    ||||| |||||||| ||||| |||||| |  |||| ||||||||||||| |||||||||| |||||| | | ||||||||| ||||||||    
T  43702542 cgtaccctcgtgggtaacaactttagtgctcttccccataccctatgggtacctaagtgcccatacccgcatccattacccgcactttaa 43702453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 151
Target Start/End: Original strand, 26299108 - 26299227
Alignment:
Q  33 cgcgtttgtaaaaatt-cccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctg 131  Q
    |||||||||||||| | ||||||| || |||||||| |||||||  ||||| ||| || || |||| |||||||||||||||| ||||||  |||||| |    
T  26299108 cgcgtttgtaaaaaatgcccgtactcgtgcccgtaccctcgtggacaacaactttggtgcccttccccataccctatgggcacttaagtgtccatacccg 26299207  T
Q  132 tacccattacccacacttta 151  Q
     ||| |||| || |||||||    
T  26299208 caccaattatccgcacttta 26299227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 259
Target Start/End: Original strand, 16278563 - 16278608
Alignment:
Q  214 aaagcaactcataaaatagtagaaatcgtagtatttagccaaataa 259  Q
    |||||||||||||||||||| |||||| |||||||| |||||||||    
T  16278563 aaagcaactcataaaatagttgaaatcatagtatttggccaaataa 16278608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 36074097 - 36074056
Alignment:
Q  218 caactcataaaatagtagaaatcgtagtatttagccaaataa 259  Q
    ||||| ||||||||||||||||||||||||| ||||||||||    
T  36074097 caacttataaaatagtagaaatcgtagtattaagccaaataa 36074056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 129
Target Start/End: Complemental strand, 40342475 - 40342378
Alignment:
Q  33 cgcgtttgtaaaaattcc-cgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacc 129  Q
    |||||||||||||| | | || |||||| ||| | | |||||||| ||||| |||||| || |||| |||||||||| ||||||||||||| ||||||    
T  40342475 cgcgtttgtaaaaaatactcggacccgaacccattccctcgtgggcaacaactttagtgcccttccccataccctataggcacctaagtgcccatacc 40342378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 152
Target Start/End: Complemental strand, 48558815 - 48558723
Alignment:
Q  60 gcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacactttaa 152  Q
    |||||||| |||||||| ||||| |||||| || |||| |||||||||||| ||| ||||||  |||| | | | ||||||||| ||||||||    
T  48558815 gcccgtaccctcgtgggcaacaactttagtgcccttccccataccctatggccacttaagtgtccatatccgcatccattacccgcactttaa 48558723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 214 - 257
Target Start/End: Complemental strand, 48644490 - 48644447
Alignment:
Q  214 aaagcaactcataaaatagtagaaatcgtagtatttagccaaat 257  Q
    ||||||||||||||||||||| |||| |||||||||| ||||||    
T  48644490 aaagcaactcataaaatagtacaaattgtagtatttaaccaaat 48644447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 141
Target Start/End: Complemental strand, 4912806 - 4912728
Alignment:
Q  63 cgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattac 141  Q
    |||||||||||||| ||||| |||| | |  |||  |||||||||||||||||| ||||| ||| |||| |||||||||    
T  4912806 cgtactctcgtgggcaacaactttaatgctcttctccataccctatgggcaccttagtgcccatccctgcacccattac 4912728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 129
Target Start/End: Original strand, 46783062 - 46783128
Alignment:
Q  63 cgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacc 129  Q
    ||||| |||||||| ||||| |||||| || |||  ||||||||||||| |||||||||| ||||||    
T  46783062 cgtaccctcgtgggcaacaactttagtccccttctccataccctatgggtacctaagtgcccatacc 46783128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 1876016 - 1875975
Alignment:
Q  218 caactcataaaatagtagaaatcgtagtatttagccaaataa 259  Q
    |||||||||||||| ||  |||||||||||||||||||||||    
T  1876016 caactcataaaataatatcaatcgtagtatttagccaaataa 1875975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 28067246 - 28067205
Alignment:
Q  218 caactcataaaatagtagaaatcgtagtatttagccaaataa 259  Q
    ||||| ||||||||||| |||| |||||||||||||||||||    
T  28067246 caactaataaaatagtataaattgtagtatttagccaaataa 28067205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 259
Target Start/End: Original strand, 44300852 - 44300893
Alignment:
Q  218 caactcataaaatagtagaaatcgtagtatttagccaaataa 259  Q
    ||||| |||||||||||  |||||||||||||||||||||||    
T  44300852 caactaataaaatagtacgaatcgtagtatttagccaaataa 44300893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 3551624 - 3551572
Alignment:
Q  100 ataccctatgggcacctaagtgctcatacctgtacccattacccacactttaa 152  Q
    |||||||||| | |||||||||  |||||| ||| ||||||||||||||||||    
T  3551624 ataccctatgagtacctaagtgtccatacccgtatccattacccacactttaa 3551572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 156
Target Start/End: Original strand, 16278476 - 16278508
Alignment:
Q  124 catacctgtacccattacccacactttaattat 156  Q
    ||||||| |||||||||||||||||||||||||    
T  16278476 catacctatacccattacccacactttaattat 16278508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 152
Target Start/End: Original strand, 42284488 - 42284580
Alignment:
Q  60 gcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacactttaa 152  Q
    ||||||||||||||||| ||||| |||||| |  |||| |||| | |||||| | |||| ||| |||||  | |||||||| |||||||||||    
T  42284488 gcccgtactctcgtgggcaacaactttagtgctcttccccatatcatatgggtatctaaatgcacatactcgcacccattatccacactttaa 42284580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 1e-28; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 29 - 156
Target Start/End: Complemental strand, 51807087 - 51806959
Alignment:
Q  29 tacccgcgtttgtaaaaa-ttcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcata 127  Q
    ||||||| |||||||||| || |||| ||||||||||||| |||||||| || ||||||||| ||  ||| ||||||||||||  |||||||||| ||||    
T  51807087 tacccgcatttgtaaaaaatttccgtgcccgagcccgtaccctcgtgggtaataattttagtgcccctccccataccctatggtaacctaagtgcccata 51806988  T
Q  128 cctgtacccattacccacactttaattat 156  Q
    |||||||||||||||| ||||||||||||    
T  51806987 cctgtacccattacccgcactttaattat 51806959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 23 - 151
Target Start/End: Complemental strand, 8806088 - 8805959
Alignment:
Q  23 tccccgtacccgcgtttgtaaaaatt-cccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtg 121  Q
    ||||| |||||||||||||||||| | ||||||||||  ||||||| |||||||| ||||| |||||| || ||||||||| ||||||||||| ||||||    
T  8806088 tccccatacccgcgtttgtaaaaaatgcccgtacccgtacccgtaccctcgtgggtaacaactttagtgcccttcctcataacctatgggcacttaagtg 8805989  T
Q  122 ctcatacctgtacccattacccacacttta 151  Q
    | |||||| | ||||||||||| |||||||    
T  8805988 cccatacccgcacccattacccgcacttta 8805959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 42 - 152
Target Start/End: Complemental strand, 2225099 - 2224989
Alignment:
Q  42 aaaaattcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattac 141  Q
    |||||| |||||||||| ||||||||  ||||||| |||||||||||| || |||  ||||||| ||||| ||||||||||||||||| | |||||||||    
T  2225099 aaaaatacccgtacccgtgcccgtaccttcgtgggcaacaattttagtccccttctccatacccgatgggtacctaagtgctcatacccgcacccattac 2225000  T
Q  142 ccacactttaa 152  Q
    || ||||||||    
T  2224999 ccgcactttaa 2224989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 23 - 140
Target Start/End: Original strand, 11034644 - 11034762
Alignment:
Q  23 tccccgtacccgcgtttgtaaaaatt-cccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtg 121  Q
    ||||| |||| ||||||||||||| | ||||||||||  ||||||| |||||||| ||||| |||||| || |||| |||||||||||||||||||||||    
T  11034644 tccccatacctgcgtttgtaaaaaatacccgtacccggacccgtaccctcgtgggcaacaactttagtgcccttccccataccctatgggcacctaagtg 11034743  T
Q  122 ctcatacctgtacccatta 140  Q
    | |||||| | ||||||||    
T  11034744 cccatacccgcacccatta 11034762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 42 - 152
Target Start/End: Original strand, 42755309 - 42755419
Alignment:
Q  42 aaaaattcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattac 141  Q
    |||||| |||||||||| |||||||| |||||||| ||||| |||||| || |||| ||||||||||||  |||||||||| |||||| | |||||||||    
T  42755309 aaaaatacccgtacccgtgcccgtaccctcgtgggtaacaactttagtccccttccccataccctatggatacctaagtgcacatacccgcacccattac 42755408  T
Q  142 ccacactttaa 152  Q
    || ||||||||    
T  42755409 ccgcactttaa 42755419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 42 - 150
Target Start/End: Complemental strand, 29406015 - 29405907
Alignment:
Q  42 aaaaattcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattac 141  Q
    |||||| | ||||||||||| ||||| |||||||| ||||| |||||| || |||| ||||| |||||||||||||||||| |||||||| ||||||||     
T  29406015 aaaaatgctcgtacccgagctcgtaccctcgtgggcaacaactttagtgcccttccccatactctatgggcacctaagtgcccatacctgcacccattat 29405916  T
Q  142 ccacacttt 150  Q
    || ||||||    
T  29405915 ccgcacttt 29405907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 50 - 150
Target Start/End: Complemental strand, 52802399 - 52802299
Alignment:
Q  50 ccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacactt 149  Q
    |||||||||||||||||| |||||||| ||||| |||| | || |||| |||||||||||||||| ||||||||||||||   ||||||||||| |||||    
T  52802399 ccgtacccgagcccgtaccctcgtgggcaacaactttaatgcccttccccataccctatgggcacttaagtgctcatacccccacccattacccgcactt 52802300  T
Q  150 t 150  Q
    |    
T  52802299 t 52802299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 50 - 150
Target Start/End: Original strand, 53140587 - 53140687
Alignment:
Q  50 ccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacactt 149  Q
    |||||||||||||||||| |||||||| ||||| |||| | || |||| |||||||||||||||| ||||||||||||||   ||||||||||| |||||    
T  53140587 ccgtacccgagcccgtaccctcgtgggcaacaactttaatgcccttccccataccctatgggcacttaagtgctcatacccccacccattacccgcactt 53140686  T
Q  150 t 150  Q
    |    
T  53140687 t 53140687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 42 - 152
Target Start/End: Complemental strand, 3387358 - 3387248
Alignment:
Q  42 aaaaattcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattac 141  Q
    |||||| |||||||||| |||||||| |||||||| ||||| |||||| |  |||| ||||||||||||| || ||||||| |||||| | |||||||||    
T  3387358 aaaaatacccgtacccgtgcccgtaccctcgtgggcaacaactttagtcctcttccccataccctatgggtacttaagtgcccatacccgcacccattac 3387259  T
Q  142 ccacactttaa 152  Q
    || ||||||||    
T  3387258 ccgcactttaa 3387248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 42 - 152
Target Start/End: Original strand, 12185747 - 12185857
Alignment:
Q  42 aaaaattcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattac 141  Q
    |||||| |||||||||| |||||||| |||||||| ||||| |||||| || |||| ||||||||||||| |||| ||||| |||||| | | |||||||    
T  12185747 aaaaatacccgtacccgtgcccgtaccctcgtgggcaacaactttagtccccttccccataccctatgggtacctcagtgcccatacccgcatccattac 12185846  T
Q  142 ccacactttaa 152  Q
    || ||||||||    
T  12185847 ccgcactttaa 12185857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 42 - 152
Target Start/End: Original strand, 12187739 - 12187849
Alignment:
Q  42 aaaaattcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattac 141  Q
    |||||| |||||||||| |||||||| |||||||| ||||| |||||| || |||| ||||||||||||| |||| ||||| |||||| | | |||||||    
T  12187739 aaaaatacccgtacccgtgcccgtaccctcgtgggcaacaactttagtccccttccccataccctatgggtacctcagtgcccatacccgcatccattac 12187838  T
Q  142 ccacactttaa 152  Q
    || ||||||||    
T  12187839 ccgcactttaa 12187849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 52 - 150
Target Start/End: Original strand, 45097540 - 45097638
Alignment:
Q  52 gtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacacttt 150  Q
    |||||||||||||||| |||||||| ||||| |||||| || |||  ||||||||||||||||||||||||  ||||| | ||||||||||| ||||||    
T  45097540 gtacccgagcccgtaccctcgtgggcaacaactttagtgcccttctccataccctatgggcacctaagtgcctatacccgcacccattacccgcacttt 45097638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 52 - 152
Target Start/End: Original strand, 21075808 - 21075908
Alignment:
Q  52 gtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacacttta 151  Q
    ||||||| |||||||| |||||||| |||| ||||||| || |||| ||||||||||||| |||||||||| |||||| | | ||||||||| |||||||    
T  21075808 gtacccgtgcccgtaccctcgtgggcaacatttttagtccccttccccataccctatgggtacctaagtgcccatacccgcatccattacccgcacttta 21075907  T
Q  152 a 152  Q
    |    
T  21075908 a 21075908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 61 - 152
Target Start/End: Original strand, 22829725 - 22829816
Alignment:
Q  61 cccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacactttaa 152  Q
    ||||||| |||||||| ||||| |||||| || |||| |||||||||||||||||||||||| |||||| | ||||||||||| || |||||    
T  22829725 cccgtaccctcgtgggcaacaactttagtgcccttccccataccctatgggcacctaagtgcccatacccgcacccattacccgcattttaa 22829816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 42 - 152
Target Start/End: Original strand, 14576760 - 14576870
Alignment:
Q  42 aaaaattcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattac 141  Q
    |||||| |||||||||| |||||||| |||||||| |||||||||||| || |||| |||| |||||||| |||| ||||| |||||| | | ||||||     
T  14576760 aaaaatacccgtacccgtgcccgtaccctcgtgggcaacaattttagtccccttccccatatcctatgggtacctcagtgcccatacccgcatccattat 14576859  T
Q  142 ccacactttaa 152  Q
    || ||||||||    
T  14576860 ccgcactttaa 14576870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 214 - 259
Target Start/End: Original strand, 44808599 - 44808644
Alignment:
Q  214 aaagcaactcataaaatagtagaaatcgtagtatttagccaaataa 259  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  44808599 aaagcaactcataaaatagtagaaatcgtagtatttagccaaataa 44808644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 214 - 259
Target Start/End: Complemental strand, 51806903 - 51806858
Alignment:
Q  214 aaagcaactcataaaatagtagaaatcgtagtatttagccaaataa 259  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  51806903 aaagcaactcataaaatagtagaaatcgtagtatttagccaaataa 51806858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 156
Target Start/End: Complemental strand, 1758120 - 1758008
Alignment:
Q  44 aaattcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattaccc 143  Q
    |||| ||| |||||| ||||||||  ||||||| ||||| |||||  || |||| ||||||||||||| |||||||||| |||||| | |||||||||||    
T  1758120 aaatgcccatacccgtgcccgtaccttcgtgggcaacaactttagggcccttccccataccctatgggtacctaagtgcccatacccgcacccattaccc 1758021  T
Q  144 acactttaattat 156  Q
     ||||||| ||||    
T  1758020 gcactttagttat 1758008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 52 - 151
Target Start/End: Complemental strand, 26340363 - 26340264
Alignment:
Q  52 gtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacacttta 151  Q
    ||||||| |||||||| |||||||| ||||| |||||| || |||| |||| ||||||||||| ||||| | |||||| | ||||||||||| |||||||    
T  26340363 gtacccgtgcccgtaccctcgtgggcaacaactttagtgcccttccccatatcctatgggcacttaagtacccatacccgcacccattacccgcacttta 26340264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 156
Target Start/End: Original strand, 652213 - 652327
Alignment:
Q  42 aaaaattcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattac 141  Q
    |||||| |||||||||| ||||||||  ||||||| |||||   |||| || |||  ||||||||||||| |||||||||| | |||| | || ||||||    
T  652213 aaaaatacccgtacccgtgcccgtaccttcgtgggcaacaacaatagtccccttctccataccctatgggtacctaagtgcccttacccgcactcattac 652312  T
Q  142 ccacactttaattat 156  Q
    |||||||||||||||    
T  652313 ccacactttaattat 652327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 152
Target Start/End: Complemental strand, 29149150 - 29149048
Alignment:
Q  50 ccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacactt 149  Q
    ||||||| | |||||||| |||||||| ||||| |||||| || |||| ||||||||||||| || ||||| | |||||| | ||||||||||| |||||    
T  29149150 ccgtaccagtgcccgtaccctcgtgggcaacaactttagtccccttccccataccctatgggtacttaagtacccatacccgcacccattacccgcactt 29149051  T
Q  150 taa 152  Q
    |||    
T  29149050 taa 29149048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 152
Target Start/End: Complemental strand, 32655656 - 32655554
Alignment:
Q  50 ccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacactt 149  Q
    ||||||||| |||||||| |||||||| ||||| |||||| || |||| ||||||||||||| || || || | |||||| | ||||||||||| |||||    
T  32655656 ccgtacccgtgcccgtaccctcgtgggcaacaactttagtccccttccccataccctatgggtacttaggtacccatacccgcacccattacccgcactt 32655557  T
Q  150 taa 152  Q
    |||    
T  32655556 taa 32655554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 152
Target Start/End: Complemental strand, 42053402 - 42053300
Alignment:
Q  50 ccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacactt 149  Q
    ||||||||| |||||||| |||||||| ||||| |||||| || |||| |||||||| |||| || ||||| | |||||| | ||||||||||| |||||    
T  42053402 ccgtacccgtgcccgtaccctcgtgggcaacaactttagtccccttccccataccctgtgggtacttaagtacccatacccgcacccattacccgcactt 42053303  T
Q  150 taa 152  Q
    |||    
T  42053302 taa 42053300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 152
Target Start/End: Complemental strand, 52180912 - 52180810
Alignment:
Q  50 ccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacactt 149  Q
    ||||||||| |||||||| |||||||| ||||| |||||| || |||| ||||||||||||| || || || | |||||| | ||||||||||| |||||    
T  52180912 ccgtacccgtgcccgtaccctcgtgggcaacaactttagtccccttccccataccctatgggtacttaggtacccatacccgcacccattacccgcactt 52180813  T
Q  150 taa 152  Q
    |||    
T  52180812 taa 52180810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 214 - 259
Target Start/End: Original strand, 24486701 - 24486746
Alignment:
Q  214 aaagcaactcataaaatagtagaaatcgtagtatttagccaaataa 259  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  24486701 aaagcaactcataaaatagtagaaatcatagtatttagccaaataa 24486746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 151
Target Start/End: Complemental strand, 28234334 - 28234206
Alignment:
Q  23 tccccgtacccgcgtttgtaaaaattc-ccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtg 121  Q
    ||||| ||||||| |||||||||| |  ||||||||| |||||||| |||||||  ||||| |||||| || ||||  |||||||||||||| || ||||    
T  28234334 tccccatacccgcatttgtaaaaaatgtccgtacccgtgcccgtaccctcgtggacaacaactttagtgcccttcccaataccctatgggca-cttagtg 28234236  T
Q  122 ctcatacctgtacccattacccacacttta 151  Q
    | |||||| | ||||||||||| |||||||    
T  28234235 cccatacccgcacccattacccgcacttta 28234206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 2721389 - 2721265
Alignment:
Q  29 tacccgcgtttgtaaaaattccc-gtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcata 127  Q
    |||||||||||||||||| |  | ||| ||| |||| ||| |||||||| ||||| |||||| || |||| ||||||||||||| |||| ||||| ||||    
T  2721389 tacccgcgtttgtaaaaaatgtctgtatccgtgcccataccctcgtgggcaacaactttagtccccttccccataccctatgggtacctcagtgcccata 2721290  T
Q  128 cctgtacccattacccacactttaa 152  Q
    || | | ||||||||| ||||||||    
T  2721289 cccgcatccattacccgcactttaa 2721265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 156
Target Start/End: Original strand, 14595254 - 14595382
Alignment:
Q  29 tacccgcgtttgtaa-aaattcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcata 127  Q
    |||||| |||||||| |||| | ||||  |||||| |||  |||||||| ||||| ||||||  | |||  |||||| ||||| ||||||||||||||||    
T  14595254 tacccgtgtttgtaacaaatgctcgtatacgagcctgtatcctcgtgggtaacaactttagtgtcattctccataccttatggacacctaagtgctcata 14595353  T
Q  128 cctgtacccattacccacactttaattat 156  Q
    || ||| ||||||||| ||||||||||||    
T  14595354 cccgtatccattacccgcactttaattat 14595382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 22306959 - 22306835
Alignment:
Q  29 tacccgcgtttgtaaaaattc-ccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcata 127  Q
    |||||||||||||||||| |  |||||  ||| ||||||| |||||||| ||||| |||||| || ||||||||||| ||||||||| || |||| ||||    
T  22306959 tacccgcgtttgtaaaaaatatccgtattcgaacccgtaccctcgtgggcaacaactttagtgcccttcctcataccttatgggcacttaggtgcccata 22306860  T
Q  128 cctgtacccattacccacactttaa 152  Q
    || | ||| ||||||| || |||||    
T  22306859 cccgcaccaattacccgcattttaa 22306835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 41 - 152
Target Start/End: Original strand, 9608937 - 9609046
Alignment:
Q  41 taaaaattcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccatta 140  Q
    ||||||| |||||||| ||||| |||| |||||||| |||||||||||| ||||| | |||||| |||||| |||||||| || ||| | | | ||||||    
T  9608937 taaaaatgcccgtacctgagcc-gtaccctcgtgggcaacaattttagtgccttttc-cataccttatgggtacctaagttctaatatccgcatccatta 9609034  T
Q  141 cccacactttaa 152  Q
    ||||||||||||    
T  9609035 cccacactttaa 9609046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 49 - 152
Target Start/End: Original strand, 41003295 - 41003398
Alignment:
Q  49 cccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacact 148  Q
    |||||||||| | | |||| || ||||| ||||| |||| | || |||| |||| |||||||| ||||||||||||||||| | ||||||||||| ||||    
T  41003295 cccgtacccgtgtctgtacccttgtgggcaacaactttaatccccttccccatatcctatgggtacctaagtgctcatacccgcacccattacccgcact 41003394  T
Q  149 ttaa 152  Q
    ||||    
T  41003395 ttaa 41003398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 152
Target Start/End: Original strand, 52595521 - 52595623
Alignment:
Q  50 ccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacactt 149  Q
    ||||| ||| |||||||| |||||||| ||||| |||||| ||  || |||||||||||||| || ||||||  |||||| | ||||||||||| |||||    
T  52595521 ccgtatccgtgcccgtaccctcgtgggcaacaactttagtccccatcatcataccctatgggtacttaagtgtccatacccgcacccattacccgcactt 52595620  T
Q  150 taa 152  Q
    |||    
T  52595621 taa 52595623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 214 - 259
Target Start/End: Original strand, 9930576 - 9930621
Alignment:
Q  214 aaagcaactcataaaatagtagaaatcgtagtatttagccaaataa 259  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||    
T  9930576 aaagcaactcataaaatagcagaaatcttagtatttagccaaataa 9930621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 214 - 259
Target Start/End: Original strand, 14595438 - 14595483
Alignment:
Q  214 aaagcaactcataaaatagtagaaatcgtagtatttagccaaataa 259  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||    
T  14595438 aaagcaactcataaaataggagaaatcgtagtatttagccagataa 14595483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 94 - 150
Target Start/End: Original strand, 33733397 - 33733453
Alignment:
Q  94 ttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacacttt 150  Q
    |||| |||||||||||||||| ||||||| |||||||| ||||||||||| ||||||    
T  33733397 ttccccataccctatgggcacttaagtgcccatacctgcacccattacccgcacttt 33733453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 152
Target Start/End: Complemental strand, 34459755 - 34459663
Alignment:
Q  60 gcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacactttaa 152  Q
    |||||||| |||||| | ||||| ||||||  | |||||||||||||||||| | |||||||| ||||| || || |||||||| ||||||||    
T  34459755 gcccgtaccctcgtgtgcaacaactttagtgtcattcctcataccctatgggtatctaagtgcacatacttgcactcattacccgcactttaa 34459663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 150
Target Start/End: Original strand, 22247849 - 22247936
Alignment:
Q  63 cgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacacttt 150  Q
    ||||| || ||||| ||||| |||||| || |||| |||||||||| ||||| |||||||||||||| | |||||||| || ||||||    
T  22247849 cgtacccttgtgggcaacaactttagtgcccttccccataccctataggcacttaagtgctcatacccgcacccattatccgcacttt 22247936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 156
Target Start/End: Complemental strand, 39485298 - 39485163
Alignment:
Q  22 ttccccgtacccgcgtttgtaaaaattc-ccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagt 120  Q
    |||||| |||||||||||||||||| |  || |||||||||||||||| ||  ||| ||||||||||||  | |||| ||||| ||   |||||||||||    
T  39485298 ttccccatacccgcgtttgtaaaaaatgtccatacccgagcccgtactttcacgggtaacaattttagtgtccttccccatactctgcaggcacctaagt 39485199  T
Q  121 gctcatacctgtacccattacccacactttaattat 156  Q
    || |||| | |||  |||| ||| ||||||||||||    
T  39485198 gcccatatccgtaaacattgcccgcactttaattat 39485163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 78 - 156
Target Start/End: Complemental strand, 1731157 - 1731079
Alignment:
Q  78 aacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacactttaattat 156  Q
    ||||| ||||||||| |||| ||||| ||||||| |||||||||| |||||||| | |||||  || ||||||||||||    
T  1731157 aacaaatttagtacccttccccatactctatgggtacctaagtgcccatacctgcatccattgtccgcactttaattat 1731079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 42 - 152
Target Start/End: Original strand, 21245808 - 21245918
Alignment:
Q  42 aaaaattcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattac 141  Q
    |||||||| |||||||| || |||| ||||||||| ||||| | |||| || |||  ||||||||||||| | |||||||| |||| | | | ||||||     
T  21245808 aaaaattctcgtacccgtgcacgtattctcgtgggcaacaactgtagtccccttctccataccctatgggtatctaagtgcccatatccgcatccattat 21245907  T
Q  142 ccacactttaa 152  Q
    |||||||||||    
T  21245908 ccacactttaa 21245918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 42 - 156
Target Start/End: Complemental strand, 27586726 - 27586612
Alignment:
Q  42 aaaaattcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattac 141  Q
    |||||| ||| |||||| ||||||||  ||||||| ||||| |||| | || |||  ||||||||||||| |||||| ||| |||||| | |  || |||    
T  27586726 aaaaatacccttacccgtgcccgtaccttcgtggggaacaactttactgccgttctccataccctatgggtacctaaatgcccatacccgcattcaatac 27586627  T
Q  142 ccacactttaattat 156  Q
    |||||||||||||||    
T  27586626 ccacactttaattat 27586612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 23349362 - 23349321
Alignment:
Q  218 caactcataaaatagtagaaatcgtagtatttagccaaataa 259  Q
    |||||||||||||||||  |||||||||||||||||||||||    
T  23349362 caactcataaaatagtatgaatcgtagtatttagccaaataa 23349321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 139
Target Start/End: Original strand, 24486549 - 24486637
Alignment:
Q  51 cgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccatt 139  Q
    |||||||||| ||||||  | ||||| ||||| ||||||  | || | |||||||||||| |||||||||| ||||||| |||||||||    
T  24486549 cgtacccgagtccgtacctttgtgggtaacaactttagtgtcatttcccataccctatggacacctaagtgatcatacccgtacccatt 24486637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 152
Target Start/End: Complemental strand, 54979261 - 54979178
Alignment:
Q  69 ctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacactttaa 152  Q
    |||||||  ||||| |||||| || |||| ||||||||||||| || ||||| | |||||| | ||||||||||| ||||||||    
T  54979261 ctcgtggataacaactttagtccccttccccataccctatgggtacttaagtacacatacccgcacccattacccgcactttaa 54979178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 151
Target Start/End: Complemental strand, 56445278 - 56445196
Alignment:
Q  69 ctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacacttta 151  Q
    |||||||| ||||| ||||||  | |||| |||||| ||||||||| ||||||| |||||  | ||||||||||| |||||||    
T  56445278 ctcgtgggcaacaactttagtgtccttccccataccttatgggcacttaagtgcccatactcgcacccattacccgcacttta 56445196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 259
Target Start/End: Original strand, 22829880 - 22829921
Alignment:
Q  218 caactcataaaatagtagaaatcgtagtatttagccaaataa 259  Q
    |||||||||||||| ||  |||||||||||||||||||||||    
T  22829880 caactcataaaataatatgaatcgtagtatttagccaaataa 22829921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 29 - 153
Target Start/End: Original strand, 31487221 - 31487346
Alignment:
Q  29 tacccgcgtttgtaaaaatt-cccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcata 127  Q
    |||||| ||||||||||| | |||||| |||| ||| ||| |||||||| |||||||||| |  |  ||| ||| ||||||||||| |||| ||||| ||    
T  31487221 tacccgtgtttgtaaaaaatacccgtatccgaacccataccctcgtgggcaacaattttactgtccgtccccatgccctatgggcatctaaatgctcgta 31487320  T
Q  128 cctgtacccattacccacactttaat 153  Q
    |  |  |||||||||| |||||||||    
T  31487321 ctcgcgcccattacccgcactttaat 31487346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 52 - 152
Target Start/End: Original strand, 33983115 - 33983215
Alignment:
Q  52 gtacccgagcccgtactctcgtgggaaacaattttagtacc-tttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacacttt 150  Q
    ||||||| | |||||| |||||||| || || |||||| || |||||| ||| |||||||| | |||||||| |||||| | ||||||||||| ||||||    
T  33983115 gtacccgtgtccgtaccctcgtgggcaataactttagtgccctttcct-atatcctatgggtatctaagtgcccatacccgcacccattacccgcacttt 33983213  T
Q  151 aa 152  Q
    ||    
T  33983214 aa 33983215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 151
Target Start/End: Original strand, 39804219 - 39804347
Alignment:
Q  23 tccccgtacccgcgtttgtaaaaattcc-cgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtg 121  Q
    ||||| ||||||| |||||||||| | | |||| ||| || |||||  ||||||| |||| ||| ||| || |||| ||||||||||||| || |||||     
T  39804219 tccccatacccgcatttgtaaaaaatgctcgtatccgtgcacgtaccttcgtgggcaacagttt-agtgcccttccccataccctatgggtacttaagta 39804317  T
Q  122 ctcatacctgtacccattacccacacttta 151  Q
    | |||||| | ||||||||||| |||||||    
T  39804318 cccatacccgcacccattacccgcacttta 39804347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 259
Target Start/End: Original strand, 41780787 - 41780828
Alignment:
Q  218 caactcataaaatagtagaaatcgtagtatttagccaaataa 259  Q
    |||||||||||||||||  |||| ||||||||||||||||||    
T  41780787 caactcataaaatagtatgaatcttagtatttagccaaataa 41780828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 47106594 - 47106553
Alignment:
Q  218 caactcataaaatagtagaaatcgtagtatttagccaaataa 259  Q
    ||||||||||||||||| ||||||||||  ||||||||||||    
T  47106594 caactcataaaatagtataaatcgtagtgcttagccaaataa 47106553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 150
Target Start/End: Original strand, 46080686 - 46080794
Alignment:
Q  42 aaaaattcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattac 141  Q
    |||||| |||||||| | | |||||  |||||||| ||||| ||||||  | |||  ||||||||||| |||| ||||||  |||||| | || ||||||    
T  46080686 aaaaatgcccgtacctgtgtccgtagcctcgtgggcaacaactttagtgtcattctccataccctatgagcacttaagtgtccatacccgcactcattac 46080785  T
Q  142 ccacacttt 150  Q
    |||||||||    
T  46080786 ccacacttt 46080794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 5e-28; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 29 - 151
Target Start/End: Original strand, 39026685 - 39026808
Alignment:
Q  29 tacccgcgtttgtaaaaatt-cccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcata 127  Q
    ||||| |||||||||||| | |||||||||||| ||||||||||||||| ||||| |||||| || |||| |||||||||||||||| ||||||| ||||    
T  39026685 tacccacgtttgtaaaaaatgcccgtacccgagtccgtactctcgtgggcaacaactttagtgcccttccccataccctatgggcacttaagtgcccata 39026784  T
Q  128 cctgtacccattacccacacttta 151  Q
    || | ||||||||||| |||||||    
T  39026785 cccgcacccattacccgcacttta 39026808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 23 - 151
Target Start/End: Original strand, 47662213 - 47662342
Alignment:
Q  23 tccccgtacccgcgtttgtaaaaattcc-cgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtg 121  Q
    ||||| ||||| |||||||||||| | | |||||||| |||||||| |||||||| ||||| |||||| || |||| |||||||||||||||| ||||||    
T  47662213 tccccatacccacgtttgtaaaaaatgctcgtacccgtgcccgtaccctcgtgggcaacaactttagtgcccttccccataccctatgggcacttaagtg 47662312  T
Q  122 ctcatacctgtacccattacccacacttta 151  Q
    | |||||| | ||||||||||| |||||||    
T  47662313 cccatacccgcacccattacccgcacttta 47662342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 4052541 - 4052401
Alignment:
Q  17 tatcattccccgtacccgcgtttgtaaaaattc-ccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacc 115  Q
    |||| |||||| |||||||||||||||||| |  ||||||||||||||||||  |||||   ||||| ||||||  | |||| |||| |||||||| |||    
T  4052541 tatccttccccatacccgcgtttgtaaaaaatgtccgtacccgagcccgtaccttcgtgaataacaactttagtgtcattccccatatcctatgggtacc 4052442  T
Q  116 taagtgctcatacctgtacccattacccacactttaattat 156  Q
    |||||||||||||| |||| ||||||||||| |||||||||    
T  4052441 taagtgctcatacccgtactcattacccacattttaattat 4052401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 31646462 - 31646338
Alignment:
Q  29 tacccgcgtttgtaaaaatt-cccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcata 127  Q
    |||||||||||||||||| | ||||||||||  ||||||| |||||||| ||||| |||||| || |||| |||||||||||||||||||||||| ||||    
T  31646462 tacccgcgtttgtaaaaaatacccgtacccggacccgtaccctcgtgggcaacaactttagtgcccttccccataccctatgggcacctaagtgcccata 31646363  T
Q  128 cctgtacccattacccacactttaa 152  Q
    || | |||| |||||| || |||||    
T  31646362 cccgcacccgttacccgcattttaa 31646338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 22 - 156
Target Start/End: Original strand, 30489603 - 30489738
Alignment:
Q  22 ttccccgtacccgcgtttgtaaaaattccc-gtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagt 120  Q
    |||||| |||||||||||||||||| | |  ||||| |||||||||| |||||||  ||||| |||||| || |||| |||| ||||||| |||||||||    
T  30489603 ttccccatacccgcgtttgtaaaaaatgcatgtacctgagcccgtaccctcgtggataacaactttagtgcccttccccatatcctatggacacctaagt 30489702  T
Q  121 gctcatacctgtacccattacccacactttaattat 156  Q
    ||  ||||| ||||||||||||| ||||||||||||    
T  30489703 gcctatacccgtacccattacccgcactttaattat 30489738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 42 - 152
Target Start/End: Complemental strand, 42069267 - 42069157
Alignment:
Q  42 aaaaattcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattac 141  Q
    |||||| |||||||||| |||||||| |||||||| ||||| |||||| || |||| ||||||||||||| | |||||||| |||||| | |||||||||    
T  42069267 aaaaatacccgtacccgtgcccgtaccctcgtgggcaacaactttagtccccttccccataccctatgggtatctaagtgcccatacccgcacccattac 42069168  T
Q  142 ccacactttaa 152  Q
    || ||||||||    
T  42069167 ccgcactttaa 42069157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 50 - 150
Target Start/End: Complemental strand, 4893434 - 4893334
Alignment:
Q  50 ccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacactt 149  Q
    |||||||||||||||||| |||||||| ||||| |||| | || |||| |||||||||||||||| ||||||||||||||   ||||||||||| |||||    
T  4893434 ccgtacccgagcccgtaccctcgtgggcaacaactttaatgcccttccccataccctatgggcacttaagtgctcatacccccacccattacccgcactt 4893335  T
Q  150 t 150  Q
    |    
T  4893334 t 4893334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 50 - 150
Target Start/End: Original strand, 29185053 - 29185153
Alignment:
Q  50 ccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacactt 149  Q
    |||||||||||||||||| |||||||| ||||| |||| | || |||| |||||||||||||||| ||||||||||||||   ||||||||||| |||||    
T  29185053 ccgtacccgagcccgtaccctcgtgggcaacaactttaatgcccttccccataccctatgggcacttaagtgctcatacccccacccattacccgcactt 29185152  T
Q  150 t 150  Q
    |    
T  29185153 t 29185153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 51 - 150
Target Start/End: Complemental strand, 33363036 - 33362937
Alignment:
Q  51 cgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacacttt 150  Q
    ||||||||||||||||| |||||||| ||||| |||| | || |||| |||||||||||||||| ||||||||||||||   ||||||||||| ||||||    
T  33363036 cgtacccgagcccgtaccctcgtgggcaacaactttaatgcccttccccataccctatgggcacttaagtgctcatacccccacccattacccgcacttt 33362937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 23 - 152
Target Start/End: Original strand, 19506321 - 19506451
Alignment:
Q  23 tccccgtacccgcgtttgtaaaaatt-cccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtg 121  Q
    ||||| ||||||  ||| |||||||| ||||||| || | |||||| |||||||| ||||| |||||| || |||| ||||||||||||| | |||||||    
T  19506321 tccccatacccgaatttttaaaaattacccgtactcgtgtccgtaccctcgtgggcaacaactttagtgcccttccccataccctatgggtatctaagtg 19506420  T
Q  122 ctcatacctgtacccattacccacactttaa 152  Q
    | |||||| | ||||||||||||||||||||    
T  19506421 cccatacccgcacccattacccacactttaa 19506451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 23 - 152
Target Start/End: Original strand, 28220906 - 28221036
Alignment:
Q  23 tccccgtacccgcgtttgtaaaaatt-cccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtg 121  Q
    ||||| ||||||| ||| |||||||| |||||| ||| |||||||| |||||||| ||||| |||||| || || | ||||||||||||| | |||||||    
T  28220906 tccccatacccgcatttttaaaaattacccgtatccgtgcccgtaccctcgtgggcaacaactttagtgccctttcccataccctatgggtatctaagtg 28221005  T
Q  122 ctcatacctgtacccattacccacactttaa 152  Q
    | |||||| | ||||||||||| ||||||||    
T  28221006 cccatacccgcacccattacccgcactttaa 28221036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 23 - 152
Target Start/End: Original strand, 50099751 - 50099881
Alignment:
Q  23 tccccgtacccgcgtttgtaaaaatt-cccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtg 121  Q
    ||||| |||||||||||||||||| | |||||||||||| |||||| ||| |||| |||||||||||| |  |||| || ||| ||||||||| ||||||    
T  50099751 tccccatacccgcgtttgtaaaaaatgcccgtacccgagtccgtaccctcatgggtaacaattttagtgctcttccccacaccttatgggcacttaagtg 50099850  T
Q  122 ctcatacctgtacccattacccacactttaa 152  Q
    | |||||| | ||||||||||  ||||||||    
T  50099851 cccatacccgcacccattacctgcactttaa 50099881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 150
Target Start/End: Complemental strand, 19996845 - 19996717
Alignment:
Q  23 tccccgtacccgcgtttgtaaaaattcc-cgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtg 121  Q
    ||||| || |||| |||||||||||| | |||||| | |||||||| |||||||| ||||| |||||| || |||| ||||||||||||| | |||||||    
T  19996845 tccccatatccgcatttgtaaaaattactcgtacctgtgcccgtaccctcgtgggcaacaactttagtgcccttccccataccctatgggtatctaagtg 19996746  T
Q  122 ctcatacctgtacccattacccacacttt 150  Q
     ||||||| | ||||||||||| ||||||    
T  19996745 ttcatacccgcacccattacccgcacttt 19996717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 29 - 156
Target Start/End: Original strand, 48662602 - 48662729
Alignment:
Q  29 tacccgcgtttgtaaaaattc-ccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcata 127  Q
    |||| ||||||||||||| |  |||||||||| | ||||| |||||||| ||||| |||||| ||||||  ||||| ||||||||||||||||| |||||    
T  48662602 tacctgcgtttgtaaaaaatatccgtacccga-ctcgtaccctcgtgggcaacaactttagtgcctttctccatactctatgggcacctaagtgttcata 48662700  T
Q  128 cctgtacccattacccacactttaattat 156  Q
    || | ||||||||||| || |||||||||    
T  48662701 cccgcacccattacccgcattttaattat 48662729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 61 - 152
Target Start/End: Complemental strand, 29426444 - 29426353
Alignment:
Q  61 cccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacactttaa 152  Q
    ||||||| |||||||| ||||| |||||| || |||| |||||| ||||||||||||||||| |||||| | |||||||||||||| |||||    
T  29426444 cccgtaccctcgtgggcaacaactttagtgcccttccccataccatatgggcacctaagtgcccatacccgcacccattacccacagtttaa 29426353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 151
Target Start/End: Complemental strand, 35739175 - 35739052
Alignment:
Q  29 tacccgcgtttgtaaaaatt-cccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcata 127  Q
    |||||||||||||||||| | ||| |||||| |||||||| || ||||| |||||||||||| || |||| || ||||||||||||| ||||||| ||||    
T  35739175 tacccgcgtttgtaaaaaatgcccatacccgtgcccgtacccttgtgggcaacaattttagtgcccttccccagaccctatgggcacttaagtgcccata 35739076  T
Q  128 cctgtacccattacccacacttta 151  Q
     | | |||||| |||| |||||||    
T  35739075 tccgcacccatcacccgcacttta 35739052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 150
Target Start/End: Original strand, 20414926 - 20415034
Alignment:
Q  42 aaaaattcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattac 141  Q
    |||||| |||||| |||||||||||| |||||||| ||||| |||| | || |||| | |||||||||||||| ||||||  |||||| | |||||||||    
T  20414926 aaaaatgcccgtatccgagcccgtaccctcgtgggcaacaactttactgcccttccccgtaccctatgggcacttaagtggccatacccgcacccattac 20415025  T
Q  142 ccacacttt 150  Q
    || ||||||    
T  20415026 ccgcacttt 20415034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 48796481 - 48796605
Alignment:
Q  29 tacccgcgtttgtaaaaatt-cccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcata 127  Q
    |||||||||||||||||| | |||||| ||| |||| ||| |||||||| || || |||||| || ||||  ||||||| ||||||||||||||| ||||    
T  48796481 tacccgcgtttgtaaaaaatacccgtatccgggcccataccctcgtgggcaataactttagtgcccttccctataccctttgggcacctaagtgcccata 48796580  T
Q  128 cctgtacccattacccacactttaa 152  Q
    || | ||||||||||| || |||||    
T  48796581 cccgcacccattacccgcagtttaa 48796605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 152
Target Start/End: Original strand, 424529 - 424639
Alignment:
Q  42 aaaaattcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattac 141  Q
    |||||| |||||||||| |||||||| |||||||| ||||| |||||  || ||||  ||| |||  ||| || ||||||| |||||||| |||||||||    
T  424529 aaaaatacccgtacccgtgcccgtaccctcgtgggcaacaactttagcccccttcccaatatcctgcgggtacttaagtgcccatacctgcacccattac 424628  T
Q  142 ccacactttaa 152  Q
    |||||||||||    
T  424629 ccacactttaa 424639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 156
Target Start/End: Original strand, 945418 - 945552
Alignment:
Q  23 tccccgtacccgcgtttgtaaaaatt-cccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtg 121  Q
    ||||| ||||||  ||| |||||||| ||||||| |  |||||||  |||||||| ||||| |||||| || |||| |||| |||||||| | |||||||    
T  945418 tccccatacccgtatttttaaaaattacccgtacacatgcccgtatcctcgtgggcaacaactttagtgcccttccccatatcctatgggtatctaagtg 945517  T
Q  122 ctcatacctgtacccattacccacactttaattat 156  Q
    | |||||| | ||||||||||| ||||||||||||    
T  945518 cccatacccgcacccattacccgcactttaattat 945552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 152
Target Start/End: Original strand, 2978357 - 2978487
Alignment:
Q  23 tccccgtacccgcgtttgtaaaaatt-cccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtg 121  Q
    ||||| ||||||| ||| |||||||| |||||||||| | | |||| || ||||| ||||| |||||| || |||| ||||||||||||| | |||||||    
T  2978357 tccccatacccgcatttttaaaaattacccgtacccgtgtctgtacccttgtgggcaacaactttagtgcccttccccataccctatgggtatctaagtg 2978456  T
Q  122 ctcatacctgtacccattacccacactttaa 152  Q
    | |||||| | || |||||||| ||||||||    
T  2978457 cccatacccgcacacattacccccactttaa 2978487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 152
Target Start/End: Original strand, 13312691 - 13312801
Alignment:
Q  42 aaaaattcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattac 141  Q
    |||||| |||||| ||| |||||||| |||||| | ||||| |||||| || |||| ||||||||||||| || ||||| | |||||| | |||||||||    
T  13312691 aaaaatacccgtatccgtgcccgtaccctcgtgagcaacaactttagtccccttccccataccctatgggtacttaagtacccatacccgcacccattac 13312790  T
Q  142 ccacactttaa 152  Q
    || ||||||||    
T  13312791 ccgcactttaa 13312801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 78 - 156
Target Start/End: Complemental strand, 31873415 - 31873338
Alignment:
Q  78 aacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacactttaattat 156  Q
    ||||||||||||  | |||| |||||| | |||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  31873415 aacaattttagtgtcattccccataccttgtgggcacctaagtgttcatacctgtaccca-tacccacactttaattat 31873338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 152
Target Start/End: Complemental strand, 35978658 - 35978549
Alignment:
Q  42 aaaaattcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattac 141  Q
    |||||| |||||||||| | |||||| |||  ||| ||||| |||||| || |||| ||||||||||||| |||||||||| |||||| | |||||||||    
T  35978658 aaaaatacccgtacccgtgtccgtac-ctcaagggcaacaactttagtccccttccccataccctatgggtacctaagtgcccatacccgcacccattac 35978560  T
Q  142 ccacactttaa 152  Q
    || ||||||||    
T  35978559 ccgcactttaa 35978549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 29 - 151
Target Start/End: Original strand, 14106264 - 14106384
Alignment:
Q  29 tacccgcgtttgtaaaaattc-ccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcata 127  Q
    ||||| |||||||||||| |  ||||||||||||  |||  |||||||| ||||| ||||||||| ||||||||||||   |||||||||||||| ||||    
T  14106264 tacccacgtttgtaaaaaatgtccgtacccgagcttgtatcctcgtgggcaacaactttagtacccttcctcataccc---gggcacctaagtgcccata 14106360  T
Q  128 cctgtacccattacccacacttta 151  Q
    || | ||||||| ||| |||||||    
T  14106361 cccgcacccattccccgcacttta 14106384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 52 - 129
Target Start/End: Complemental strand, 46772642 - 46772565
Alignment:
Q  52 gtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacc 129  Q
    ||||||||| |||||  |||||||| ||||| ||||||  | |||| |||||||||||||||||||||||||||||||    
T  46772642 gtacccgagtccgtatcctcgtgggtaacaactttagtgtcattccccataccctatgggcacctaagtgctcatacc 46772565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 2501510 - 2501638
Alignment:
Q  22 ttccccgtacccgcgtttgtaaaaattcc-cgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagt 120  Q
    |||||| ||| |||||||||||||| | | ||||||||| ||| |||||||| ||| ||||| ||||||  | |||| ||| || ||||||||||| ||     
T  2501510 ttccccatacacgcgtttgtaaaaaatactcgtacccgatcccatactctcgcgggcaacaactttagtgtccttccccatcccttatgggcaccttagc 2501609  T
Q  121 gctcatacctgtacccattacccacactt 149  Q
    || |||||| | |||||||||||||||||    
T  2501610 gcccatacccgcacccattacccacactt 2501638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 143
Target Start/End: Original strand, 48514376 - 48514491
Alignment:
Q  29 tacccgcgtttgtaaaaattcc-cgtacccgagcccgtactctcgtgggaaacaattttagtac-ctttcctcataccctatgggcacctaagtgctcat 126  Q
    |||||||||||||||||| | | |||||||| | |||||| |||||||  ||||| |||||| | |||||| |||||||||||||||| ||||||| |||    
T  48514376 tacccgcgtttgtaaaaaatgctcgtacccgtgtccgtaccctcgtggacaacaactttagtgctctttcc-cataccctatgggcacttaagtgcccat 48514474  T
Q  127 acctgtacccattaccc 143  Q
    | | |||||||||||||    
T  48514475 aaccgtacccattaccc 48514491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 61 - 152
Target Start/End: Original strand, 610687 - 610778
Alignment:
Q  61 cccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacactttaa 152  Q
    ||||||| |||||||| ||||| |||||| |  |||| ||||||||||||| || ||||||| |||||| | ||||||||||| ||||||||    
T  610687 cccgtaccctcgtgggcaacaactttagttctcttccccataccctatgggtacttaagtgcacatacccgcacccattacccgcactttaa 610778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 69 - 152
Target Start/End: Original strand, 25059086 - 25059169
Alignment:
Q  69 ctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacactttaa 152  Q
    |||||||| ||||| |||||| || |||| ||||||||||||| | |||||||| |||||| | ||||||||||| ||||||||    
T  25059086 ctcgtgggcaacaactttagtgcccttccccataccctatgggtatctaagtgcccatacccgcacccattacccgcactttaa 25059169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 61 - 156
Target Start/End: Complemental strand, 33794532 - 33794437
Alignment:
Q  61 cccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacactttaattat 156  Q
    |||||||  |||| || ||||| |||||| || |||| ||||||||||||| ||||||||||||||| | | ||||||||| | ||||||||||||    
T  33794532 cccgtaccttcgtaggcaacaactttagtccccttccccataccctatgggtacctaagtgctcatatccgcacccattactcgcactttaattat 33794437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 61 - 152
Target Start/End: Complemental strand, 44328060 - 44327969
Alignment:
Q  61 cccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacactttaa 152  Q
    ||||||| |||||| | ||||| |||||| || |||| ||||||||||||| |||||||||  |||||| | ||||||||||| ||||||||    
T  44328060 cccgtaccctcgtgagcaacaactttagtccccttccccataccctatgggtacctaagtgtccatacccgcacccattacccgcactttaa 44327969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 152
Target Start/End: Complemental strand, 25815468 - 25815366
Alignment:
Q  50 ccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacactt 149  Q
    ||||||||| |||| ||| |||||||| ||||| ||| || || |||| ||||||||||||| || ||||| | |||||| | ||||||||||| |||||    
T  25815468 ccgtacccgtgcccataccctcgtgggcaacaactttggtccccttccccataccctatgggtacttaagtacccatacccgcacccattacccgcactt 25815369  T
Q  150 taa 152  Q
    |||    
T  25815368 taa 25815366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 42 - 152
Target Start/End: Complemental strand, 48964523 - 48964413
Alignment:
Q  42 aaaaattcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattac 141  Q
    |||||| ||||| |||  |||||||  |||||||| ||||| |||||| || |||| ||||| ||||||| |||| ||||| |||||| | |||||||||    
T  48964523 aaaaatacccgtgcccttgcccgtatcctcgtgggcaacaactttagtccccttccccatactctatgggtacctcagtgcccatacccgcacccattac 48964424  T
Q  142 ccacactttaa 152  Q
    || ||||||||    
T  48964423 ccgcactttaa 48964413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 16177047 - 16177006
Alignment:
Q  218 caactcataaaatagtagaaatcgtagtatttagccaaataa 259  Q
    ||||||||||||||| ||||||||||||||||||||||||||    
T  16177047 caactcataaaatagcagaaatcgtagtatttagccaaataa 16177006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 29054734 - 29054645
Alignment:
Q  63 cgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacactttaa 152  Q
    |||| ||||||||| ||||| ||| || || |||| ||||||||||||| |||||||||  |||||| | ||||||||||| ||||||||    
T  29054734 cgtattctcgtgggcaacaactttggtccccttccccataccctatgggtacctaagtgtccatacccgcacccattacccgcactttaa 29054645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 2975408 - 2975284
Alignment:
Q  29 tacccgcgtttgtaaaaatt-cccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcata 127  Q
    ||||||| ||| |||||||| |||||||||| | | |||| |||||||| ||||| |||||| || |||  ||||||||||||| | |||||| | ||||    
T  2975408 tacccgcatttttaaaaattacccgtacccgtgtctgtaccctcgtgggcaacaactttagtgcccttcgccataccctatgggtatctaagtacccata 2975309  T
Q  128 cctgtacccattacccacactttaa 152  Q
    || | || |||||||| ||||||||    
T  2975308 cccgcacacattacccccactttaa 2975284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 129
Target Start/End: Complemental strand, 40094632 - 40094572
Alignment:
Q  69 ctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacc 129  Q
    |||||||| ||||| |||||| || |||| |||||||||||||||||||||||| ||||||    
T  40094632 ctcgtgggcaacaactttagtgcccttccccataccctatgggcacctaagtgcccatacc 40094572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 152
Target Start/End: Complemental strand, 32835621 - 32835550
Alignment:
Q  81 aattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacactttaa 152  Q
    ||||||||| || ||||||||||  |||||| ||||||||||||||||| | || |||||||| ||||||||    
T  32835621 aattttagtgcccttcctcatactttatgggtacctaagtgctcatacccgcactcattacccgcactttaa 32835550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 50 - 152
Target Start/End: Original strand, 9222209 - 9222311
Alignment:
Q  50 ccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacactt 149  Q
    ||||||||| |  ||||| |||||||| ||||| |||||| || |||| ||||||||||||| || ||||| | ||||||   ||||||||||| |||||    
T  9222209 ccgtacccgtgttcgtaccctcgtgggcaacaactttagtccccttccccataccctatgggtacttaagtacccatacccacacccattacccgcactt 9222308  T
Q  150 taa 152  Q
    |||    
T  9222309 taa 9222311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 94 - 152
Target Start/End: Original strand, 48985140 - 48985198
Alignment:
Q  94 ttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacactttaa 152  Q
    ||||||||||||||||||||| ||||||  |||||||| ||||||||||| || |||||    
T  48985140 ttcctcataccctatgggcacttaagtgtccatacctgcacccattacccgcattttaa 48985198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 4052342 - 4052301
Alignment:
Q  218 caactcataaaatagtagaaatcgtagtatttagccaaataa 259  Q
    |||||| |||||||||||||||| ||||||||||||||||||    
T  4052342 caactcgtaaaatagtagaaatcttagtatttagccaaataa 4052301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 35949729 - 35949640
Alignment:
Q  63 cgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacactttaa 152  Q
    ||||| |||||||  ||||| ||||||  | |||| |||||||| ||||||||||||||| |||||| | ||||||||||| || |||||    
T  35949729 cgtaccctcgtggacaacaactttagtgtcattccccataccctgtgggcacctaagtgcccatacccgcacccattacccgcagtttaa 35949640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 129
Target Start/End: Original strand, 38491395 - 38491464
Alignment:
Q  60 gcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacc 129  Q
    |||||||| ||||| || ||||| ||||||||| |||| ||||||||||||| | |||||||| ||||||    
T  38491395 gcccgtaccctcgtaggcaacaactttagtacccttccccataccctatgggtatctaagtgcccatacc 38491464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 46772460 - 46772419
Alignment:
Q  218 caactcataaaatagtagaaatcgtagtatttagccaaataa 259  Q
    ||||||||||||||||| |||||||||||||||| |||||||    
T  46772460 caactcataaaatagtaaaaatcgtagtatttagtcaaataa 46772419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 156
Target Start/End: Original strand, 10786185 - 10786289
Alignment:
Q  52 gtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacacttta 151  Q
    |||| ||||||| || ||||||||| ||||| ||||||  | |||  |||||  |||| |||||| |||||||||||||| || ||||||||  ||||||    
T  10786185 gtactcgagcccatattctcgtgggcaacaactttagtgtcattctccatactttatgagcaccttagtgctcatacctgcactcattacccgtacttta 10786284  T
Q  152 attat 156  Q
    |||||    
T  10786285 attat 10786289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 65 - 152
Target Start/End: Complemental strand, 30623125 - 30623038
Alignment:
Q  65 tactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacactttaa 152  Q
    |||||||||||| ||||| |||||| || |||| ||||||||||| | | |||||||  |||||| | |||||||||| | |||||||    
T  30623125 tactctcgtgggcaacaactttagttcccttccccataccctatgagtagctaagtgtccatacccgcacccattacctatactttaa 30623038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 99 - 156
Target Start/End: Original strand, 973524 - 973581
Alignment:
Q  99 cataccctatgggcacctaagtgctcatacctgtacccattacccacactttaattat 156  Q
    ||||||||||||| |||||||||| |||| | | |||||||| || ||||||||||||    
T  973524 cataccctatgggtacctaagtgcacatatccgcacccattatccgcactttaattat 973581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 259
Target Start/End: Original strand, 7814958 - 7815003
Alignment:
Q  214 aaagcaactcataaaatagtagaaatcgtagtatttagccaaataa 259  Q
    |||||||||||| |||||||| ||| |||| |||||||||||||||    
T  7814958 aaagcaactcattaaatagtaaaaaccgtaatatttagccaaataa 7815003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 8981722 - 8981661
Alignment:
Q  29 tacccgcgtttgtaaaaattc-ccgtacccgagcccgtactctcgtgggaaacaattttagt 89  Q
    |||||||||||||||||| |  |||||| ||||||||||| |||||||| ||||| ||||||    
T  8981722 tacccgcgtttgtaaaaaatatccgtactcgagcccgtaccctcgtgggcaacaactttagt 8981661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 259
Target Start/End: Original strand, 20415100 - 20415141
Alignment:
Q  218 caactcataaaatagtagaaatcgtagtatttagccaaataa 259  Q
    ||||| |||||||||||  |||||||||||||||||||||||    
T  20415100 caactaataaaatagtacgaatcgtagtatttagccaaataa 20415141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 29 - 129
Target Start/End: Complemental strand, 22580230 - 22580129
Alignment:
Q  29 tacccgcgtttgtaaaaatt-cccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcata 127  Q
    |||||| ||||||||||| | |||||||||||| |||||  | |||||  || ||||||||| ||||| | |||| |||||||| |||| ||||| ||||    
T  22580230 tacccgtgtttgtaaaaaatacccgtacccgagtccgtatccccgtggacaataattttagtgccttttcccatatcctatgggtaccttagtgcccata 22580131  T
Q  128 cc 129  Q
    ||    
T  22580130 cc 22580129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 243
Target Start/End: Original strand, 30489793 - 30489822
Alignment:
Q  214 aaagcaactcataaaatagtagaaatcgta 243  Q
    ||||||||||||||||||||||||||||||    
T  30489793 aaagcaactcataaaatagtagaaatcgta 30489822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 42 - 152
Target Start/End: Complemental strand, 31107798 - 31107686
Alignment:
Q  42 aaaaattcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacc--tgtacccatt 139  Q
    |||||| ||||||||| ||| ||||   ||||||| ||||| ||| || || |||  ||||||||||||| || ||||||||||||||  |||| |||||    
T  31107798 aaaaatacccgtacccaagctcgtatcttcgtgggcaacaaatttggtgcccttctccataccctatgggtacttaagtgctcatacccgtgtatccatt 31107699  T
Q  140 acccacactttaa 152  Q
    || | ||||||||    
T  31107698 actcgcactttaa 31107686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 219 - 259
Target Start/End: Original strand, 610842 - 610882
Alignment:
Q  219 aactcataaaatagtagaaatcgtagtatttagccaaataa 259  Q
    ||||||||||| |||| |||||||||||||||| |||||||    
T  610842 aactcataaaagagtacaaatcgtagtatttagtcaaataa 610882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 149
Target Start/End: Original strand, 2433247 - 2433327
Alignment:
Q  70 tcgtgggaaacaattttagtacctttcctcataccc-tatgggcacctaagtgctcatacctgtacccattacccacactt 149  Q
    ||||||| ||||| ||||||  | |||| ||||||| |||||| |||||||||| ||||||   |||||||||||||||||    
T  2433247 tcgtgggcaacaactttagtgtccttccccatacccctatgggtacctaagtgcccataccctcacccattacccacactt 2433327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 2e-27; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 22 - 139
Target Start/End: Original strand, 10937359 - 10937477
Alignment:
Q  22 ttccccgtacccgcgtttgtaaaaatt-cccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagt 120  Q
    |||||| |||||| ||||||||||| | ||||||||||||||| ||| |||||||| ||||| |||||| || |||| ||||||||||||||||||||||    
T  10937359 ttccccatacccgtgtttgtaaaaaatgcccgtacccgagcccataccctcgtgggtaacaactttagtgcccttccccataccctatgggcacctaagt 10937458  T
Q  121 gctcatacctgtacccatt 139  Q
    || |||||| |||||||||    
T  10937459 gcccatacccgtacccatt 10937477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 23 - 152
Target Start/End: Original strand, 29455730 - 29455860
Alignment:
Q  23 tccccgtacccgcgtttgtaaaaatt-cccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtg 121  Q
    ||||| ||||||| ||| |||||||| |||||||||| | |||||| |||||||| ||||| |||||| || |||| |||||| |||||| | |||||||    
T  29455730 tccccatacccgcatttttaaaaattacccgtacccgtgtccgtaccctcgtgggcaacaactttagtgcccttccccataccttatgggtatctaagtg 29455829  T
Q  122 ctcatacctgtacccattacccacactttaa 152  Q
    | |||||| | ||||||||||||||||||||    
T  29455830 cccatacccgcacccattacccacactttaa 29455860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 23 - 143
Target Start/End: Complemental strand, 4902109 - 4901988
Alignment:
Q  23 tccccgtacccgcgtttgtaaaaattccc-gtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtg 121  Q
    ||||| |||||||||||||||||| |  | ||||||| | |||||| |||||||| ||||| |||||| || |||| |||||||||||||||||||||||    
T  4902109 tccccatacccgcgtttgtaaaaaatgtctgtacccgtgtccgtaccctcgtgggtaacaactttagtgcccttccccataccctatgggcacctaagtg 4902010  T
Q  122 ctcatacctgtacccattaccc 143  Q
    | |||||| | |||||||||||    
T  4902009 cccatacccgcacccattaccc 4901988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 41 - 152
Target Start/End: Original strand, 7977988 - 7978100
Alignment:
Q  41 taaaaatt-cccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccatt 139  Q
    |||||||| |||||||||| | |||||| |||||||| ||||| |||||| || |||| ||||||||||||| | ||||||||||||||| | |||||||    
T  7977988 taaaaattacccgtacccgtgtccgtaccctcgtgggcaacaactttagtgcccttccccataccctatgggtatctaagtgctcatacccgcacccatt 7978087  T
Q  140 acccacactttaa 152  Q
    |||| ||||||||    
T  7978088 acccgcactttaa 7978100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 42 - 150
Target Start/End: Original strand, 38309735 - 38309843
Alignment:
Q  42 aaaaattcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattac 141  Q
    |||||| ||||||| ||||||||||| ||| |||| ||||||||||||||| || | |||||||||||||||| |||||||||||||| | || |||||     
T  38309735 aaaaatgcccgtactcgagcccgtaccctcatgggcaacaattttagtaccctttcccataccctatgggcacttaagtgctcatacccgcacacattat 38309834  T
Q  142 ccacacttt 150  Q
    || ||||||    
T  38309835 ccgcacttt 38309843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 42 - 152
Target Start/End: Original strand, 14088228 - 14088337
Alignment:
Q  42 aaaaattcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattac 141  Q
    |||||| |||||||||| |||||||| ||||| || ||||| |||||| || |||| |||||||||| || |||||||||| |||||| |||||||||||    
T  14088228 aaaaatacccgtacccgtgcccgtaccctcgtaggcaacaactttagtccccttccccataccctat-ggtacctaagtgcccatacccgtacccattac 14088326  T
Q  142 ccacactttaa 152  Q
    || ||||||||    
T  14088327 ccgcactttaa 14088337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 23 - 140
Target Start/End: Complemental strand, 15674147 - 15674030
Alignment:
Q  23 tccccgtacccgcgtttgtaaaaatt-cccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtg 121  Q
    ||||| |||||||||||||||||| | |||||||||| |||||||| |||||||| ||||| ||| || || |||| |||||||||||||||||||||||    
T  15674147 tccccatacccgcgtttgtaaaaaatacccgtacccgggcccgtaccctcgtgggcaacaactttcgtgcccttcc-cataccctatgggcacctaagtg 15674049  T
Q  122 ctcatacctgtacccatta 140  Q
      |||||| | ||||||||    
T  15674048 tccatacccgcacccatta 15674030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 42 - 150
Target Start/End: Complemental strand, 19254636 - 19254528
Alignment:
Q  42 aaaaattcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattac 141  Q
    |||||| ||||||||| ||||||||| |||||||  ||||| |||||| || |||| ||||||||||| |||| ||||||| |||||| | |||||||||    
T  19254636 aaaaatgcccgtacccaagcccgtaccctcgtggacaacaactttagtgcccttccccataccctatgagcacttaagtgcccatacccgcacccattac 19254537  T
Q  142 ccacacttt 150  Q
    || ||||||    
T  19254536 ccgcacttt 19254528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 50 - 150
Target Start/End: Complemental strand, 41692608 - 41692508
Alignment:
Q  50 ccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacactt 149  Q
    |||||||||| ||||||| |||||||| ||||| |||| | || |||| |||||||||||||||| ||||||||||||||   ||||||||||| |||||    
T  41692608 ccgtacccgaacccgtaccctcgtgggcaacaactttaatgcccttccccataccctatgggcacttaagtgctcatacccccacccattacccgcactt 41692509  T
Q  150 t 150  Q
    |    
T  41692508 t 41692508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 129
Target Start/End: Original strand, 14087603 - 14087710
Alignment:
Q  23 tccccgtacccgcgtttgtaaaaattc-ccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtg 121  Q
    ||||| ||||||| ||| ||||||||  ||||||||| |||||||| |||||||| ||||| |||||| ||||||| ||||||||||||| | |||||||    
T  14087603 tccccatacccgcatttttaaaaattatccgtacccgtgcccgtaccctcgtgggcaacaactttagtgcctttccccataccctatgggtatctaagtg 14087702  T
Q  122 ctcatacc 129  Q
    | ||||||    
T  14087703 cccatacc 14087710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 129
Target Start/End: Complemental strand, 15719330 - 15719243
Alignment:
Q  42 aaaaattcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacc 129  Q
    |||||| |||||||||| |||||||| |||||||| ||||| |||||| || |||||||||||||||||| || ||||||| ||||||    
T  15719330 aaaaatacccgtacccgtgcccgtaccctcgtgggcaacaactttagtccccttcctcataccctatgggtacttaagtgcccatacc 15719243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 152
Target Start/End: Original strand, 35935276 - 35935375
Alignment:
Q  53 tacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacactttaa 152  Q
    |||||| |||||||| |||||||| ||||| |||||| || |||  ||||||||| |||||||||||||| |||||| | |||||||||||||| |||||    
T  35935276 tacccgggcccgtaccctcgtgggcaacaactttagtgcccttctccataccctacgggcacctaagtgcccatacccgcacccattacccacagtttaa 35935375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 42 - 152
Target Start/End: Original strand, 14645274 - 14645384
Alignment:
Q  42 aaaaattcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattac 141  Q
    |||||| |||||||||| |||||||| |||||||| ||||| |||||| || | || ||||||||||||| || ||||||  |||||| | |||||||||    
T  14645274 aaaaatacccgtacccgtgcccgtaccctcgtgggcaacaactttagtcccctcccccataccctatgggtacttaagtgtccatacccgcacccattac 14645373  T
Q  142 ccacactttaa 152  Q
    || ||||||||    
T  14645374 ccgcactttaa 14645384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 42 - 152
Target Start/End: Original strand, 41616543 - 41616653
Alignment:
Q  42 aaaaattcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattac 141  Q
    |||||| |||||| ||| |||||||| |||||||| ||||| |||||| || |||  ||||||||||||| || ||||||| |||||| | |||||||||    
T  41616543 aaaaatacccgtatccgtgcccgtaccctcgtgggcaacaactttagtccccttctccataccctatgggtacttaagtgcccatacccgcacccattac 41616642  T
Q  142 ccacactttaa 152  Q
    || ||||||||    
T  41616643 ccgcactttaa 41616653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 50 - 150
Target Start/End: Complemental strand, 34718924 - 34718824
Alignment:
Q  50 ccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacactt 149  Q
    |||| ||||||||||||| |||||||  ||||| |||| | || |||| |||||||||||||||| ||||||||||||||   ||||||||||| |||||    
T  34718924 ccgtccccgagcccgtaccctcgtggacaacaactttaatgcccttccccataccctatgggcacttaagtgctcatacccccacccattacccgcactt 34718825  T
Q  150 t 150  Q
    |    
T  34718824 t 34718824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 140
Target Start/End: Complemental strand, 33347244 - 33347126
Alignment:
Q  23 tccccgtacccgcgtttgtaaaaattcc-cgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtg 121  Q
    ||||| || ||||||||||||||| |   |||||||| |||||||| |||||||| ||||| ||| || || |||| |||||||||||||||||||||||    
T  33347244 tccccatatccgcgtttgtaaaaaatattcgtacccgggcccgtaccctcgtgggcaacaactttcgtgcccttccccataccctatgggcacctaagtg 33347145  T
Q  122 ctcatacctgtacccatta 140  Q
      |||||| | ||||||||    
T  33347144 tccatacccgcacccatta 33347126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 214 - 259
Target Start/End: Original strand, 10937484 - 10937529
Alignment:
Q  214 aaagcaactcataaaatagtagaaatcgtagtatttagccaaataa 259  Q
    |||||||||||||||||||||||||||||||||||||| |||||||    
T  10937484 aaagcaactcataaaatagtagaaatcgtagtatttaggcaaataa 10937529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 84 - 152
Target Start/End: Complemental strand, 24489179 - 24489111
Alignment:
Q  84 tttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacactttaa 152  Q
    |||||||||||||||||||||||||| |||||| | |||  ||||| | ||||||||||||||||||||    
T  24489179 tttagtacctttcctcataccctatgcgcaccttaatgcctatacccgcacccattacccacactttaa 24489111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 214 - 256
Target Start/End: Complemental strand, 5657698 - 5657656
Alignment:
Q  214 aaagcaactcataaaatagtagaaatcgtagtatttagccaaa 256  Q
    ||||||||||||||||||||||||||||||||||||| |||||    
T  5657698 aaagcaactcataaaatagtagaaatcgtagtatttaaccaaa 5657656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 151
Target Start/End: Original strand, 35853510 - 35853590
Alignment:
Q  71 cgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacacttta 151  Q
    |||||| ||||| ||||||  | |||| |||||||||||||||| ||||||| |||||| | ||||||||||| |||||||    
T  35853510 cgtgggcaacaactttagtgtccttccccataccctatgggcacttaagtgcccatacccgcacccattacccgcacttta 35853590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 129
Target Start/End: Complemental strand, 6225001 - 6224894
Alignment:
Q  23 tccccgtacccgcgtttgtaaaaattcc-cgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtg 121  Q
    ||||| ||||||| ||| |||||||| | |||||||| |||||||| ||| |||| ||||| |||||| || |||| ||||||||||||| | | |||||    
T  6225001 tccccatacccgcatttttaaaaattactcgtacccgtgcccgtaccctcatgggcaacaactttagtgcccttccccataccctatgggtatccaagtg 6224902  T
Q  122 ctcatacc 129  Q
    | ||||||    
T  6224901 cccatacc 6224894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 151
Target Start/End: Original strand, 30774745 - 30774875
Alignment:
Q  23 tccccgtacccgcgtttgt--aaaaattcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagt 120  Q
    ||||| || ||||||||||  |||||| | ||||| || | |||||| |||||||| ||||| |||||| || |||| |||||||||| ||||| |||||    
T  30774745 tccccatatccgcgtttgtaaaaaaatgctcgtactcgtgtccgtaccctcgtgggcaacaactttagtgcccttccccataccctataggcacttaagt 30774844  T
Q  121 gctcatacctgtacccattacccacacttta 151  Q
    ||  ||||| | ||||| ||||| |||||||    
T  30774845 gcctatacccgcacccactacccgcacttta 30774875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 152
Target Start/End: Original strand, 41983270 - 41983317
Alignment:
Q  105 ctatgggcacctaagtgctcatacctgtacccattacccacactttaa 152  Q
    ||||||| ||||||||||||||||||| ||||||||||| ||||||||    
T  41983270 ctatgggtacctaagtgctcatacctgcacccattacccgcactttaa 41983317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 32 - 129
Target Start/End: Complemental strand, 639521 - 639423
Alignment:
Q  32 ccgcgtttgtaaaaattccc-gtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacc 129  Q
    ||||||||||||||| | || ||| |||||  ||||| |||||||| ||||| ||||||  |||||| ||||||||||||| || ||||||| ||||||    
T  639521 ccgcgtttgtaaaaaatacctgtatccgagttcgtaccctcgtgggcaacaactttagtgtctttccccataccctatgggtacttaagtgcccatacc 639423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 151
Target Start/End: Original strand, 32302375 - 32302457
Alignment:
Q  69 ctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacacttta 151  Q
    |||||||| ||||| ||||||  | |||| |||||| ||||||||| ||||||| |||||| | ||||||||||| |||||||    
T  32302375 ctcgtgggcaacaactttagtgtccttccccataccttatgggcacttaagtgcccatacccgcacccattacccgcacttta 32302457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 639336 - 639295
Alignment:
Q  218 caactcataaaatagtagaaatcgtagtatttagccaaataa 259  Q
    ||||| ||||||||||| ||||||||||||||||||||||||    
T  639336 caactaataaaatagtataaatcgtagtatttagccaaataa 639295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 152
Target Start/End: Original strand, 16186716 - 16186837
Alignment:
Q  32 ccgcgtttgtaaaaatt-cccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacct 130  Q
    ||||||||||||||| | ||||||| |||  | |||| |||||| | ||||| |||||| ||||||| |||||  |||||| || ||||||| |||||      
T  16186716 ccgcgtttgtaaaaaatacccgtactcgaatctgtaccctcgtgagcaacaactttagttcctttccacatactttatgggtacttaagtgcccatacac 16186815  T
Q  131 gtacccattacccacactttaa 152  Q
    | ||||||||||| ||||||||    
T  16186816 gcacccattacccgcactttaa 16186837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 106 - 151
Target Start/End: Complemental strand, 16620398 - 16620353
Alignment:
Q  106 tatgggcacctaagtgctcatacctgtacccattacccacacttta 151  Q
    ||||| ||||||||||||||||| ||||||||||| ||||||||||    
T  16620398 tatggacacctaagtgctcatacttgtacccattatccacacttta 16620353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 250
Target Start/End: Original strand, 42030993 - 42031029
Alignment:
Q  214 aaagcaactcataaaatagtagaaatcgtagtattta 250  Q
    ||||||| |||||||||||||||||||||||||||||    
T  42030993 aaagcaattcataaaatagtagaaatcgtagtattta 42031029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 152
Target Start/End: Original strand, 19549288 - 19549419
Alignment:
Q  22 ttccccgtacccgcgtttgtaaa-aattcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagt 120  Q
    |||||| ||||| |||||||||| ||| |  ||| |||||| ||||| | |||||| ||||| ||| ||| | |||| ||||||| ||||| ||||||||    
T  19549288 ttccccatacccacgtttgtaaagaatgcatgtatccgagctcgtacccacgtgggcaacaactttggtatccttccccataccccatgggtacctaagt 19549387  T
Q  121 gctcatacctgtacccattacccacactttaa 152  Q
     | ||||||   ||||||||||| ||||||||    
T  19549388 acccatacccacacccattacccgcactttaa 19549419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 259
Target Start/End: Original strand, 6311115 - 6311156
Alignment:
Q  218 caactcataaaatagtagaaatcgtagtatttagccaaataa 259  Q
    |||||||||||||||||  ||| |||||||||||||||||||    
T  6311115 caactcataaaatagtacgaattgtagtatttagccaaataa 6311156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 259
Target Start/End: Original strand, 16186901 - 16186942
Alignment:
Q  218 caactcataaaatagtagaaatcgtagtatttagccaaataa 259  Q
    ||||| ||||||||||| ||||||||||||||| ||||||||    
T  16186901 caactaataaaatagtataaatcgtagtatttaaccaaataa 16186942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 19254462 - 19254421
Alignment:
Q  218 caactcataaaatagtagaaatcgtagtatttagccaaataa 259  Q
    ||||| |||||||||||  |||||||||||||||||||||||    
T  19254462 caactaataaaatagtatgaatcgtagtatttagccaaataa 19254421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 25694650 - 25694609
Alignment:
Q  218 caactcataaaatagtagaaatcgtagtatttagccaaataa 259  Q
    ||||| |||||||||||  |||||||||||||||||||||||    
T  25694650 caactaataaaatagtacgaatcgtagtatttagccaaataa 25694609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 23 - 152
Target Start/End: Complemental strand, 26295 - 26165
Alignment:
Q  23 tccccgtacccgcgtttgtaaaaatt-cccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtg 121  Q
    ||||| |||||||||||||||||| | |||||| |||| ||||||| |||||||| ||||| |||||| || ||||||||||||||||| ||||||||||    
T  26295 tccccatacccgcgtttgtaaaaaatacccgtatccgaacccgtaccctcgtgggcaacaactttagtgcccttcctcataccctatggtcacctaagtg 26196  T
Q  122 ctcatacctgtacccattacccacactttaa 152  Q
    |||||| | | || |||||||| || |||||    
T  26195 ctcataaccgcactcattacccgcattttaa 26165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 26100 - 26059
Alignment:
Q  218 caactcataaaatagtagaaatcgtagtatttagccaaataa 259  Q
    |||||||||||||| ||  |||||||||||||||||||||||    
T  26100 caactcataaaataatatgaatcgtagtatttagccaaataa 26059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 4e-25; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 221927 - 222052
Alignment:
Q  29 tacccgcgtttgtaaaaa--ttcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcat 126  Q
    ||||||||||||||||||  |  |||||||||| ||||||| |||||||| ||||| ||||||  | |||| ||||||||||||||||||||||||||||    
T  221927 tacccgcgtttgtaaaaaaatatccgtacccgaacccgtaccctcgtgggcaacaactttagtgtccttccccataccctatgggcacctaagtgctcat 222026  T
Q  127 acctgtacccattacccacactttaa 152  Q
    ||| | ||||||||||| || |||||    
T  222027 acccgcacccattacccgcattttaa 222052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 691082 - 691207
Alignment:
Q  29 tacccgcgtttgtaaaaa--ttcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcat 126  Q
    ||||||||||||||||||  |  |||||||||| ||||||| |||||||| ||||| ||||||  | |||| ||||||||||||||||||||||||||||    
T  691082 tacccgcgtttgtaaaaaaatatccgtacccgaacccgtaccctcgtgggcaacaactttagtgtccttccccataccctatgggcacctaagtgctcat 691181  T
Q  127 acctgtacccattacccacactttaa 152  Q
    ||| | ||||||||||| || |||||    
T  691182 acccgcacccattacccgcattttaa 691207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 735550 - 735675
Alignment:
Q  29 tacccgcgtttgtaaaaa--ttcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcat 126  Q
    ||||||||||||||||||  |  |||||||||| ||||||| |||||||| ||||| ||||||  | |||| ||||||||||||||||||||||||||||    
T  735550 tacccgcgtttgtaaaaaaatatccgtacccgaacccgtaccctcgtgggcaacaactttagtgtccttccccataccctatgggcacctaagtgctcat 735649  T
Q  127 acctgtacccattacccacactttaa 152  Q
    ||| | ||||||||||| || |||||    
T  735650 acccgcacccattacccgcattttaa 735675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 859446 - 859571
Alignment:
Q  29 tacccgcgtttgtaaaaa--ttcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcat 126  Q
    ||||||||||||||||||  |  |||||||||| ||||||| |||||||| ||||| ||||||  | |||| ||||||||||||||||||||||||||||    
T  859446 tacccgcgtttgtaaaaaaatatccgtacccgaacccgtaccctcgtgggcaacaactttagtgtccttccccataccctatgggcacctaagtgctcat 859545  T
Q  127 acctgtacccattacccacactttaa 152  Q
    ||| | ||||||||||| || |||||    
T  859546 acccgcacccattacccgcattttaa 859571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 23 - 143
Target Start/End: Original strand, 7579996 - 7580117
Alignment:
Q  23 tccccgtacccgcgtttgtaaaaattc-ccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtg 121  Q
    ||||| |||||| ||||||||||| |  ||||||||| |||||||| |||||||| ||||| |||||| || |||| |||||||||||||||||||||||    
T  7579996 tccccatacccgtgtttgtaaaaaatggccgtacccgtgcccgtaccctcgtgggtaacaactttagtgcccttccccataccctatgggcacctaagtg 7580095  T
Q  122 ctcatacctgtacccattaccc 143  Q
    | |||||| | |||||||||||    
T  7580096 cccatacccgcacccattaccc 7580117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 52 - 156
Target Start/End: Complemental strand, 15961811 - 15961707
Alignment:
Q  52 gtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacacttta 151  Q
    |||||||||| ||||| |||||||| ||||| ||||||||| |||||||||  ||||||||||||| |||| ||||| |||||||||||||| || ||||    
T  15961811 gtacccgagctcgtacactcgtgggtaacaactttagtacccttcctcatattctatgggcacctacgtgcccatacatgtacccattacccgcatttta 15961712  T
Q  152 attat 156  Q
    |||||    
T  15961711 attat 15961707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 2621124 - 2621000
Alignment:
Q  29 tacccgcgtttgtaaaaatt-cccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcata 127  Q
    ||||||| ||| |||||||| ||||||| || | |||||| |||||||| ||||| |||||| || |||| ||||||||||||| | |||||||| ||||    
T  2621124 tacccgcatttttaaaaattacccgtactcgtgtccgtaccctcgtgggcaacaactttagtgccattccccataccctatgggtatctaagtgcccata 2621025  T
Q  128 cctgtacccattacccacactttaa 152  Q
    |||| ||||||||||| ||||||||    
T  2621024 cctgcacccattacccgcactttaa 2621000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 42 - 152
Target Start/End: Original strand, 1376144 - 1376254
Alignment:
Q  42 aaaaattcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattac 141  Q
    |||||| | |||||||| ||||||||  ||||||| ||||| |||||| || ||||| |||||||||||| |||||||||| |||||| | |||||||||    
T  1376144 aaaaatactcgtacccgtgcccgtaccttcgtgggcaacaactttagtcccattccttataccctatgggtacctaagtgcccatacccgcacccattac 1376243  T
Q  142 ccacactttaa 152  Q
    || ||||||||    
T  1376244 ccgcactttaa 1376254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 42 - 152
Target Start/End: Original strand, 24789471 - 24789581
Alignment:
Q  42 aaaaattcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattac 141  Q
    |||||| |||||||||| ||||||||  ||||||| ||||| |||||| || |||||||||||||||||| || ||||||  |||||| | |||||||||    
T  24789471 aaaaatacccgtacccgtgcccgtaccttcgtgggcaacaactttagtccccttcctcataccctatgggtacttaagtgtccatacccgcacccattac 24789570  T
Q  142 ccacactttaa 152  Q
    || ||||||||    
T  24789571 ccgcactttaa 24789581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 155
Target Start/End: Complemental strand, 37226943 - 37226809
Alignment:
Q  22 ttccccgtacccgcgtttgtaaaaatt-cccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagt 120  Q
    |||||| ||||||| |||||||||| | |||||||||||||| |||| ||| |||| ||||| ||||||  | |||| ||||||||||||||||||||||    
T  37226943 ttccccatacccgcatttgtaaaaaatgcccgtacccgagcctgtaccctcctgggtaacaactttagtgtcattccccataccctatgggcacctaagt 37226844  T
Q  121 gctcatacctgtacccattacccacactttaatta 155  Q
    || |||||  ||| | |||| || |||||||||||    
T  37226843 gcccatactcgtatctattatccgcactttaatta 37226809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 37 - 152
Target Start/End: Complemental strand, 19643669 - 19643553
Alignment:
Q  37 tttgtaaaaatt-cccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacc 135  Q
    |||||||||||| |||||||||| ||||||||  ||||||| ||||| |||||| || |||||||||||||||||| | ||| |||| |||||| |  ||    
T  19643669 tttgtaaaaattacccgtacccgtgcccgtaccttcgtgggcaacaactttagtgcccttcctcataccctatgggtatctaggtgcccatacccgcgcc 19643570  T
Q  136 cattacccacactttaa 152  Q
    |||||||| ||||||||    
T  19643569 cattacccgcactttaa 19643553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 50 - 150
Target Start/End: Original strand, 20216174 - 20216274
Alignment:
Q  50 ccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacactt 149  Q
    |||||||||||||||||| |||||||| ||||| |||||| || |||| |||| | ||||||||| ||||||| |||||||| |||| |||||| |||||    
T  20216174 ccgtacccgagcccgtaccctcgtgggcaacaactttagtgcccttccccatatcttatgggcacttaagtgcccatacctgcacccgttacccgcactt 20216273  T
Q  150 t 150  Q
    |    
T  20216274 t 20216274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 50 - 150
Target Start/End: Original strand, 20235772 - 20235872
Alignment:
Q  50 ccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacactt 149  Q
    |||||||||||||||||| |||||||| ||||| |||||| || |||| |||| | ||||||||| ||||||| |||||||| |||| |||||| |||||    
T  20235772 ccgtacccgagcccgtaccctcgtgggcaacaactttagtgcccttccccatatcttatgggcacttaagtgcccatacctgcacccgttacccgcactt 20235871  T
Q  150 t 150  Q
    |    
T  20235872 t 20235872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 152
Target Start/End: Complemental strand, 3617014 - 3616904
Alignment:
Q  42 aaaaattcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattac 141  Q
    |||||| | |||||||| |||||||| |||||||| ||||| |||||| || |||| ||||||||||||| |||||||| | |||||  | ||| |||||    
T  3617014 aaaaatactcgtacccgtgcccgtaccctcgtgggcaacaactttagtccccttccccataccctatgggtacctaagtacccatactcgcacctattac 3616915  T
Q  142 ccacactttaa 152  Q
    || ||||||||    
T  3616914 ccgcactttaa 3616904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 70 - 152
Target Start/End: Original strand, 6109609 - 6109691
Alignment:
Q  70 tcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacactttaa 152  Q
    ||||||| ||||| |||||| ||||| |  |||||||||||| ||||||||||||||||| | ||||||||||| ||||||||    
T  6109609 tcgtgggcaacaactttagtgccttttccaataccctatgggtacctaagtgctcatacccgcacccattacccgcactttaa 6109691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 152
Target Start/End: Complemental strand, 24891587 - 24891457
Alignment:
Q  23 tccccgtacccgcgtttgtaaaaattcc-cgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtg 121  Q
    ||||| ||||||| |||||||||||| | |||||||| || |||||  ||||||  ||||| ||||||||| || | ||||||||||||| |||||||||    
T  24891587 tccccatacccgcatttgtaaaaattactcgtacccgtgctcgtaccgtcgtggacaacaactttagtaccctttcccataccctatgggtacctaagtg 24891488  T
Q  122 ctcatacctgtacccattacccacactttaa 152  Q
    |   |||| | ||||||||||| ||||||||    
T  24891487 cctgtacccgcacccattacccgcactttaa 24891457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 152
Target Start/End: Original strand, 38019987 - 38020117
Alignment:
Q  23 tccccgtacccgcgtttgtaaaaattcc-cgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtg 121  Q
    ||||| |||||||||||||||||| | | ||||| |  |||||||| |||||||  ||| | |||||| || |||| |||||||||||||||||||||||    
T  38019987 tccccatacccgcgtttgtaaaaaatactcgtactcaggcccgtaccctcgtggacaactactttagtgcccttccccataccctatgggcacctaagtg 38020086  T
Q  122 ctcatacctgtacccattacccacactttaa 152  Q
      |||||| | ||||||||||| || |||||    
T  38020087 tccatacccgcacccattacccgcagtttaa 38020117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 69 - 152
Target Start/End: Original strand, 1667242 - 1667325
Alignment:
Q  69 ctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacactttaa 152  Q
    |||||||| ||||| |||||| || |||| ||||||||||||| |||||||||| |||||| | |||||||| || ||||||||    
T  1667242 ctcgtgggcaacaactttagtgcccttccccataccctatgggtacctaagtgcccatacccgcacccattaacctcactttaa 1667325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 15542264 - 15542305
Alignment:
Q  214 aaagcaactcataaaatagtagaaatcgtagtatttagccaa 255  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  15542264 aaagcaactcataaaatagtagaaattgtagtatttagccaa 15542305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 129
Target Start/End: Complemental strand, 2472444 - 2472343
Alignment:
Q  29 tacccgcgtttgtaaaaattc-ccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcata 127  Q
    ||||||| ||||||||||||  || || ||| |||||||| |||||||  ||||| |||||| || |||| ||||||||||||| || ||||||| ||||    
T  2472444 tacccgcatttgtaaaaattatccatatccgtgcccgtaccctcgtggacaacaactttagtgccattccccataccctatgggtacataagtgcccata 2472345  T
Q  128 cc 129  Q
    ||    
T  2472344 cc 2472343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 256
Target Start/End: Complemental strand, 37226746 - 37226709
Alignment:
Q  219 aactcataaaatagtagaaatcgtagtatttagccaaa 256  Q
    |||||||||||||||||||||| |||||||||||||||    
T  37226746 aactcataaaatagtagaaatcatagtatttagccaaa 37226709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 156
Target Start/End: Original strand, 15542148 - 15542207
Alignment:
Q  97 ctcataccctatgggcacctaagtgctcatacctgtacccattacccacactttaattat 156  Q
    |||||| | ||||||||||||||||| ||||||  |||||||||||  ||||||||||||    
T  15542148 ctcatatcttatgggcacctaagtgcccatacccatacccattacctgcactttaattat 15542207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 152
Target Start/End: Original strand, 7057616 - 7057674
Alignment:
Q  94 ttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacactttaa 152  Q
    |||| ||||||||||||| |||||||||| |||||  ||||||||||| | ||||||||    
T  7057616 ttccccataccctatgggtacctaagtgcacatactcgtacccattactcgcactttaa 7057674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 118
Target Start/End: Complemental strand, 34776893 - 34776803
Alignment:
Q  29 tacccgcgtttgtaaaaatt-cccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaa 118  Q
    |||||||||||||||||| | ||||||||||| ||| ||| || ||||| |||||||||| | ||  ||| ||| ||||||||||| ||||    
T  34776893 tacccgcgtttgtaaaaaatgcccgtacccgaacccatacccttgtgggcaacaattttactgcccgtccccatgccctatgggcatctaa 34776803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 129
Target Start/End: Original strand, 38551558 - 38551624
Alignment:
Q  63 cgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacc 129  Q
    ||||| |||||||| ||||| |||||  || |||| |||||||||||||||| ||||||| ||||||    
T  38551558 cgtaccctcgtgggcaacaactttagcgcccttccccataccctatgggcacttaagtgcccatacc 38551624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 259
Target Start/End: Original strand, 20216340 - 20216381
Alignment:
Q  218 caactcataaaatagtagaaatcgtagtatttagccaaataa 259  Q
    ||||| |||||||||||  |||||||||||||||||||||||    
T  20216340 caactaataaaatagtacgaatcgtagtatttagccaaataa 20216381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 259
Target Start/End: Original strand, 20235938 - 20235979
Alignment:
Q  218 caactcataaaatagtagaaatcgtagtatttagccaaataa 259  Q
    ||||| |||||||||||  |||||||||||||||||||||||    
T  20235938 caactaataaaatagtacgaatcgtagtatttagccaaataa 20235979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 227 - 259
Target Start/End: Complemental strand, 15961630 - 15961598
Alignment:
Q  227 aaatagtagaaatcgtagtatttagccaaataa 259  Q
    |||||||||||||||| ||||||||||||||||    
T  15961630 aaatagtagaaatcgtggtatttagccaaataa 15961598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 219 - 259
Target Start/End: Complemental strand, 26561205 - 26561165
Alignment:
Q  219 aactcataaaatagtagaaatcgtagtatttagccaaataa 259  Q
    |||||||||||||||| |||||||| ||||||| |||||||    
T  26561205 aactcataaaatagtacaaatcgtaatatttagtcaaataa 26561165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 30801265 - 30801316
Alignment:
Q  100 ataccctatgggcacctaagtgctcatacctgtacccattacccacactttaa 152  Q
    |||||||||||| |||||||||  |||||| |||||||||| |||||||||||    
T  30801265 ataccctatgggtacctaagtgtccatacccgtacccatta-ccacactttaa 30801316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 2e-24; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 23 - 151
Target Start/End: Complemental strand, 9062310 - 9062181
Alignment:
Q  23 tccccgtacccgcgtttgtaaaaatt-cccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtg 121  Q
    ||||| |||||||||||||||||| | |||||||||| | |||||| |||||||  ||||| |||||| || |||| |||||||||||||||| ||||||    
T  9062310 tccccatacccgcgtttgtaaaaaatgcccgtacccgtgtccgtaccctcgtggacaacaactttagtgcccttccccataccctatgggcacttaagtg 9062211  T
Q  122 ctcatacctgtacccattacccacacttta 151  Q
    | |||||| | ||||||||||| |||||||    
T  9062210 cccatacccgcacccattacccgcacttta 9062181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 50 - 150
Target Start/End: Complemental strand, 24447261 - 24447161
Alignment:
Q  50 ccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacactt 149  Q
    |||||||||||||||||| |||||||| ||||| |||| | || |||| |||||||||||||||| ||||||||||||||   ||||||||||| |||||    
T  24447261 ccgtacccgagcccgtaccctcgtgggcaacaactttaatgcccttccccataccctatgggcacttaagtgctcatacccccacccattacccgcactt 24447162  T
Q  150 t 150  Q
    |    
T  24447161 t 24447161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 50 - 152
Target Start/End: Complemental strand, 20691725 - 20691623
Alignment:
Q  50 ccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacactt 149  Q
    ||||||||| | |||||| |||||||| ||||| |||||| || |||| ||||||||||||| |||||||||| |||||| | ||||||||||| |||||    
T  20691725 ccgtacccgtgtccgtaccctcgtgggcaacaactttagtccccttccccataccctatgggtacctaagtgcccatacccgcacccattacccgcactt 20691626  T
Q  150 taa 152  Q
    |||    
T  20691625 taa 20691623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 53 - 151
Target Start/End: Original strand, 6337210 - 6337308
Alignment:
Q  53 tacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacacttta 151  Q
    |||||| || ||||| |||||||| ||||| |||||| || |||| ||||||||||||| |||||||||| |||||| | ||| |||||||||||||||    
T  6337210 tacccgtgctcgtaccctcgtgggcaacaactttagtgccattccccataccctatgggtacctaagtgcccatacccgcacctattacccacacttta 6337308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 29 - 153
Target Start/End: Complemental strand, 6338094 - 6337969
Alignment:
Q  29 tacccgcgtttgtaaaaattcc-cgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcata 127  Q
    |||||||||||||||||| | | ||||  || |||| ||| |||||||| ||||| |||||| || |||| ||||||||||||||||||||| |||||||    
T  6338094 tacccgcgtttgtaaaaaatacacgtattcgggcccataccctcgtgggcaacaactttagtgcccttccccataccctatgggcacctaagagctcata 6337995  T
Q  128 cctgtacccattacccacactttaat 153  Q
    || | ||| ||||||| || ||||||    
T  6337994 cccgcaccaattacccgcagtttaat 6337969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 50 - 150
Target Start/End: Complemental strand, 1221850 - 1221750
Alignment:
Q  50 ccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacactt 149  Q
    |||||||||||||||||| || ||||  ||||| |||| | || |||| |||||||||||||||| ||||||||||||||   ||||||||||| |||||    
T  1221850 ccgtacccgagcccgtacccttgtggacaacaactttaatgcccttccccataccctatgggcacttaagtgctcatacccccacccattacccgcactt 1221751  T
Q  150 t 150  Q
    |    
T  1221750 t 1221750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 152
Target Start/End: Complemental strand, 1329706 - 1329596
Alignment:
Q  42 aaaaattcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattac 141  Q
    |||||| | |||||||| |||| ||| |||||||| ||||| |||||| || |||| ||||||||||||  |||||||||| ||||||   |||||||||    
T  1329706 aaaaatactcgtacccgtgcccttaccctcgtgggcaacaactttagtccccttccccataccctatggatacctaagtgcccatacccacacccattac 1329607  T
Q  142 ccacactttaa 152  Q
    || ||||||||    
T  1329606 ccgcactttaa 1329596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 152
Target Start/End: Original strand, 33331566 - 33331676
Alignment:
Q  42 aaaaattcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattac 141  Q
    |||||| |||||||||| |||||||| || ||||| ||||| |||||| || |||| ||||||||||||| || ||| | |||||||| | || ||||||    
T  33331566 aaaaatacccgtacccgtgcccgtacccttgtgggcaacaactttagtccccttccccataccctatgggtacttaattactcatacccgcactcattac 33331665  T
Q  142 ccacactttaa 152  Q
    || ||||||||    
T  33331666 ccgcactttaa 33331676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 42 - 152
Target Start/End: Complemental strand, 13534336 - 13534226
Alignment:
Q  42 aaaaattcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattac 141  Q
    |||||| || ||||||| | |||||| |||||||| ||||| |||||| || |||| |||||| |||||| || ||||| | |||||| | |||||||||    
T  13534336 aaaaatacctgtacccgtgtccgtaccctcgtgggcaacaactttagtcccattccccataccatatgggtacttaagtacccatacccgcacccattac 13534237  T
Q  142 ccacactttaa 152  Q
    || ||||||||    
T  13534236 ccgcactttaa 13534226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 114
Target Start/End: Complemental strand, 6799590 - 6799498
Alignment:
Q  23 tccccgtacccgcgtttgta-aaaattcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcac 114  Q
    ||||| |||||||||||||| ||||| ||||||||||  ||||||| |||||||| ||||  |||||| || |||| |||||| |||||||||    
T  6799590 tccccatacccgcgtttgtaaaaaatgcccgtacccgtacccgtaccctcgtgggcaacatctttagtgcccttccccataccttatgggcac 6799498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 129
Target Start/End: Complemental strand, 31784117 - 31784030
Alignment:
Q  42 aaaaattcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacc 129  Q
    |||||| | ||||| || |||||||| |||||  | ||||| |||||| || |||| ||||||||||||| |||||||||||||||||    
T  31784117 aaaaatacacgtacacgtgcccgtaccctcgtacgcaacaactttagtccccttccccataccctatgggtacctaagtgctcatacc 31784030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 42 - 152
Target Start/End: Original strand, 31070762 - 31070872
Alignment:
Q  42 aaaaattcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattac 141  Q
    |||||| ||||||| || |||||||| ||||||   ||||| |||||| || || |  || ||||||||| |||||||||| |||||| | |||||||||    
T  31070762 aaaaatacccgtacacgtgcccgtaccctcgtgaacaacaactttagtcccctttccaatcccctatgggtacctaagtgcccatacccgcacccattac 31070861  T
Q  142 ccacactttaa 152  Q
    || ||||||||    
T  31070862 ccgcactttaa 31070872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 129
Target Start/End: Original strand, 6938029 - 6938097
Alignment:
Q  61 cccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacc 129  Q
    ||||||| | |||||| ||||| |||||| || |||| ||||||||||||| |||||||||| ||||||    
T  6938029 cccgtacccccgtgggcaacaactttagtgcccttccccataccctatgggtacctaagtgcccatacc 6938097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 152
Target Start/End: Original strand, 33328564 - 33328664
Alignment:
Q  52 gtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacacttta 151  Q
    ||||||| |||||||| || ||||| ||||| |||||| || |||| ||||||||||||| || |||||   |||||| | || |||||||| |||||||    
T  33328564 gtacccgtgcccgtacccttgtgggcaacaactttagtccccttccccataccctatgggtacttaagtaaccatacccgcactcattacccgcacttta 33328663  T
Q  152 a 152  Q
    |    
T  33328664 a 33328664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 42 - 129
Target Start/End: Complemental strand, 29641597 - 29641510
Alignment:
Q  42 aaaaattcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacc 129  Q
    |||||| ||| |||||| |||||||| |||||||  ||||| ||||||  |  ||| |||||| ||||||||||||||||| ||||||    
T  29641597 aaaaatacccatacccgtgcccgtaccctcgtggacaacaactttagtcgccatccccataccatatgggcacctaagtgcccatacc 29641510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 33960124 - 33960083
Alignment:
Q  218 caactcataaaatagtagaaatcgtagtatttagccaaataa 259  Q
    ||||| |||||||||||  |||||||||||||||||||||||    
T  33960124 caactaataaaatagtacgaatcgtagtatttagccaaataa 33960083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0242 (Bit Score: 56; Significance: 3e-23; HSPs: 4)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 23 - 129
Target Start/End: Complemental strand, 13241 - 13134
Alignment:
Q  23 tccccgtacccgcgtttgt-aaaaattcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtg 121  Q
    ||||| ||||||||||||| |||||| || |||||||||||||||| |||||||| ||||| |||||| ||||||| ||||||||||||| || ||||||    
T  13241 tccccatacccgcgtttgtgaaaaatacctgtacccgagcccgtaccctcgtgggcaacaactttagtgcctttccccataccctatgggtacttaagtg 13142  T
Q  122 ctcatacc 129  Q
    | ||||||    
T  13141 cccatacc 13134  T

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Target: scaffold0242; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 23 - 129
Target Start/End: Complemental strand, 22076 - 21969
Alignment:
Q  23 tccccgtacccgcgtttgt-aaaaattcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtg 121  Q
    ||||| ||||||||||||| |||||| || |||||||||||||||| |||||||| ||||| |||||| ||||||| ||||||||||||| || ||||||    
T  22076 tccccatacccgcgtttgtgaaaaatacctgtacccgagcccgtaccctcgtgggcaacaactttagtgcctttccccataccctatgggtacttaagtg 21977  T
Q  122 ctcatacc 129  Q
    | ||||||    
T  21976 cccatacc 21969  T

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Target: scaffold0242; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 13060 - 13019
Alignment:
Q  218 caactcataaaatagtagaaatcgtagtatttagccaaataa 259  Q
    ||||| ||||||||||| || |||||||||||||||||||||    
T  13060 caactaataaaatagtataagtcgtagtatttagccaaataa 13019  T

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Target: scaffold0242; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 21895 - 21854
Alignment:
Q  218 caactcataaaatagtagaaatcgtagtatttagccaaataa 259  Q
    ||||| ||||||||||| || |||||||||||||||||||||    
T  21895 caactaataaaatagtataagtcgtagtatttagccaaataa 21854  T

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Target: scaffold0230 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 52 - 150
Target Start/End: Original strand, 26604 - 26702
Alignment:
Q  52 gtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattacccacacttt 150  Q
    |||||||||||||||| |||||||| ||||| |||| | || |||| |||||||||||||||| ||||||||||||||   ||||||||||| ||||||    
T  26604 gtacccgagcccgtaccctcgtgggcaacaactttaatgcccttccccataccctatgggcacttaagtgctcatacccccacccattacccgcacttt 26702  T

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Target: scaffold0005 (Bit Score: 47; Significance: 6e-18; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 42 - 152
Target Start/End: Complemental strand, 240615 - 240505
Alignment:
Q  42 aaaaattcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattac 141  Q
    |||||| |||||||||| |||||||| |||||||| |||||||||||| || |||| |||| |||||||| |||| ||||| |||||| | | ||||||     
T  240615 aaaaatacccgtacccgtgcccgtaccctcgtgggcaacaattttagtccccttccccatatcctatgggtacctcagtgcccatacccgcatccattat 240516  T
Q  142 ccacactttaa 152  Q
    || ||||||||    
T  240515 ccgcactttaa 240505  T

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Target: scaffold0005; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 156
Target Start/End: Complemental strand, 222124 - 221996
Alignment:
Q  29 tacccgcgtttgtaa-aaattcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcata 127  Q
    |||||| |||||||| |||| | ||||  |||||| |||  |||||||| ||||| ||||||  | |||  |||||| ||||| ||||||||||||||||    
T  222124 tacccgtgtttgtaacaaatgctcgtatacgagcctgtatcctcgtgggtaacaactttagtgtcattctccataccttatggacacctaagtgctcata 222025  T
Q  128 cctgtacccattacccacactttaattat 156  Q
    || ||| ||||||||| ||||||||||||    
T  222024 cccgtatccattacccgcactttaattat 221996  T

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Target: scaffold0005; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 214 - 259
Target Start/End: Complemental strand, 221940 - 221895
Alignment:
Q  214 aaagcaactcataaaatagtagaaatcgtagtatttagccaaataa 259  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||    
T  221940 aaagcaactcataaaataggagaaatcgtagtatttagccagataa 221895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 34 - 152
Target Start/End: Original strand, 250108 - 250227
Alignment:
Q  34 gcgtttgtaaaaattcc-cgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgt 132  Q
    ||||||||||||| | | ||||||||| ||| ||||| |||||| ||||||||||||  | |||| |||||| |||||||  |||||| ||||||| |||    
T  250108 gcgtttgtaaaaaatactcgtacccgatcccatactcgcgtgggcaacaattttagtgtccttccccataccttatgggcgtctaagtactcatacatgt 250207  T
Q  133 acccattacccacactttaa 152  Q
    |||||||| || ||||||||    
T  250208 acccattatccgcactttaa 250227  T

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Target: scaffold0312 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 152
Target Start/End: Complemental strand, 6020 - 5910
Alignment:
Q  42 aaaaattcccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctgtacccattac 141  Q
    |||||| |||||||||| |||||||| |||||||| ||||| |||||  || ||||  ||| |||  ||| || ||||||| |||||||| |||||||||    
T  6020 aaaaatacccgtacccgtgcccgtaccctcgtgggcaacaactttagcccccttcccaatatcctgcgggtacttaagtgcccatacctgcacccattac 5921  T
Q  142 ccacactttaa 152  Q
    |||||||||||    
T  5920 ccacactttaa 5910  T

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Target: scaffold0164 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0164
Description:

Target: scaffold0164; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 53 - 131
Target Start/End: Complemental strand, 7234 - 7156
Alignment:
Q  53 tacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctg 131  Q
    |||||| |||||||| |||||||| ||||| |||||| || |||||||||||||| ||| |||||||||| ||||||||    
T  7234 tacccgtgcccgtaccctcgtgggcaacaactttagtccccttcctcataccctaagggtacctaagtgcccatacctg 7156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0164; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 53 - 131
Target Start/End: Complemental strand, 15115 - 15037
Alignment:
Q  53 tacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacctg 131  Q
    |||||| |||||||| |||||||| ||||| |||||| || |||||||||||||| ||| |||||||||| ||||||||    
T  15115 tacccgtgcccgtaccctcgtgggcaacaactttagtccccttcctcataccctaagggtacctaagtgcccatacctg 15037  T

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Target: scaffold0024 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 151
Target Start/End: Complemental strand, 110168 - 110045
Alignment:
Q  29 tacccgcgtttgtaaaaatt-cccgtacccgagcccgtactctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcata 127  Q
    |||||||||||||||||| | |||||| | | |||||||   ||||||| ||||| |||||| || |||| |||| |||||||| || ||||||||||||    
T  110168 tacccgcgtttgtaaaaaatgcccgtatctgtgcccgtatcttcgtgggcaacaactttagtgcccttccccatatcctatgggtacttaagtgctcata 110069  T
Q  128 cctgtacccattacccacacttta 151  Q
    ||   ||| ||||||| |||||||    
T  110068 ccctcacctattacccgcacttta 110045  T

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Target: scaffold0938 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0938
Description:

Target: scaffold0938; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 32 - 152
Target Start/End: Original strand, 408 - 530
Alignment:
Q  32 ccgcgtttgta-aaaattcccgtacccgagcccgta-ctctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacc 129  Q
    ||||||||||| ||||| |||||| ||||| ||||| | || ||||| ||||| |||| |   ||||| ||||||||||||| || ||||||| ||||||    
T  408 ccgcgtttgtataaaatacccgtatccgagtccgtatcccttgtgggcaacaactttattgtttttccacataccctatgggtacttaagtgcccatacc 507  T
Q  130 tgtacccattacccacactttaa 152  Q
     | ||||||||||| ||||||||    
T  508 cgcacccattacccgcactttaa 530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0938; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 255
Target Start/End: Original strand, 599 - 636
Alignment:
Q  218 caactcataaaatagtagaaatcgtagtatttagccaa 255  Q
    ||||| ||||||||||| ||||||||||||||||||||    
T  599 caactaataaaatagtataaatcgtagtatttagccaa 636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 35; Significance: 0.00000000009; HSPs: 4)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 32 - 152
Target Start/End: Complemental strand, 24044 - 23922
Alignment:
Q  32 ccgcgtttgta-aaaattcccgtacccgagcccgta-ctctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacc 129  Q
    ||||||||||| ||||| |||||| ||||| ||||| | || ||||| ||||| |||| |   ||||| ||||||||||||| || ||||||| ||||||    
T  24044 ccgcgtttgtataaaatacccgtatccgagtccgtatcccttgtgggcaacaactttattgtttttccacataccctatgggtacttaagtgcccatacc 23945  T
Q  130 tgtacccattacccacactttaa 152  Q
     | ||||||||||| ||||||||    
T  23944 cgcacccattacccgcactttaa 23922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 32 - 152
Target Start/End: Complemental strand, 34212 - 34090
Alignment:
Q  32 ccgcgtttgta-aaaattcccgtacccgagcccgta-ctctcgtgggaaacaattttagtacctttcctcataccctatgggcacctaagtgctcatacc 129  Q
    ||||||||||| ||||| |||||| ||||| ||||| | || ||||| ||||| |||| |   ||||| ||||||||||||| || ||||||| ||||||    
T  34212 ccgcgtttgtataaaatacccgtatccgagtccgtatcccttgtgggcaacaactttattgtttttccacataccctatgggtacttaagtgcccatacc 34113  T
Q  130 tgtacccattacccacactttaa 152  Q
     | ||||||||||| ||||||||    
T  34112 cgcacccattacccgcactttaa 34090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 255
Target Start/End: Complemental strand, 23853 - 23816
Alignment:
Q  218 caactcataaaatagtagaaatcgtagtatttagccaa 255  Q
    ||||| ||||||||||| ||||||||||||||||||||    
T  23853 caactaataaaatagtataaatcgtagtatttagccaa 23816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 255
Target Start/End: Complemental strand, 34021 - 33984
Alignment:
Q  218 caactcataaaatagtagaaatcgtagtatttagccaa 255  Q
    ||||| ||||||||||| ||||||||||||||||||||    
T  34021 caactaataaaatagtataaatcgtagtatttagccaa 33984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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