View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15324_high_46 (Length: 250)

Name: NF15324_high_46
Description: NF15324
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15324_high_46
NF15324_high_46
[»] chr2 (19 HSPs)
chr2 (63-246)||(23863055-23863238)
chr2 (60-114)||(36837780-36837834)
chr2 (60-115)||(1777471-1777526)
chr2 (60-115)||(2412430-2412485)
chr2 (60-115)||(23861754-23861809)
chr2 (60-115)||(25977872-25977927)
chr2 (60-115)||(25979253-25979308)
chr2 (60-116)||(8810705-8810761)
chr2 (60-115)||(19604921-19604976)
chr2 (71-114)||(24754171-24754214)
chr2 (60-115)||(25283274-25283329)
chr2 (60-115)||(8809598-8809654)
chr2 (67-115)||(25282409-25282457)
chr2 (62-117)||(1137981-1138036)
chr2 (60-115)||(1778792-1778847)
chr2 (60-115)||(30843646-30843701)
chr2 (62-124)||(146319-146381)
chr2 (62-115)||(18113091-18113144)
chr2 (60-117)||(21573936-21573993)
[»] chr3 (36 HSPs)
chr3 (60-115)||(52401019-52401074)
chr3 (60-115)||(20489360-20489415)
chr3 (60-115)||(52403126-52403181)
chr3 (60-117)||(20488366-20488423)
chr3 (60-115)||(39820606-39820661)
chr3 (60-115)||(53121304-53121359)
chr3 (66-115)||(42446528-42446577)
chr3 (60-120)||(4705678-4705738)
chr3 (63-115)||(46026078-46026130)
chr3 (60-115)||(45267307-45267362)
chr3 (60-127)||(47433811-47433878)
chr3 (60-115)||(48033060-48033115)
chr3 (60-115)||(48035734-48035789)
chr3 (60-115)||(52708619-52708674)
chr3 (62-115)||(20585648-20585701)
chr3 (66-115)||(40476223-40476272)
chr3 (60-112)||(977848-977900)
chr3 (63-115)||(40477379-40477431)
chr3 (63-115)||(54437472-54437524)
chr3 (64-115)||(38505585-38505636)
chr3 (71-114)||(42444040-42444083)
chr3 (60-115)||(45268572-45268627)
chr3 (62-114)||(52707539-52707591)
chr3 (60-115)||(32635596-32635651)
chr3 (60-115)||(32637190-32637245)
chr3 (67-114)||(37845408-37845455)
chr3 (60-115)||(39819314-39819369)
chr3 (60-115)||(43641145-43641200)
chr3 (60-115)||(46027419-46027474)
chr3 (64-115)||(51004144-51004195)
chr3 (60-114)||(50563813-50563867)
chr3 (62-115)||(45002330-45002383)
chr3 (62-127)||(50196289-50196354)
chr3 (79-115)||(3417813-3417849)
chr3 (63-115)||(9855180-9855232)
chr3 (85-117)||(35533279-35533311)
[»] chr1 (37 HSPs)
chr1 (63-115)||(24609921-24609973)
chr1 (60-115)||(9774890-9774945)
chr1 (60-115)||(27262910-27262965)
chr1 (60-115)||(27264218-27264273)
chr1 (60-115)||(39163026-39163081)
chr1 (60-115)||(46075052-46075107)
chr1 (62-120)||(51240116-51240174)
chr1 (62-115)||(48588965-48589018)
chr1 (62-115)||(48594052-48594105)
chr1 (62-115)||(48598663-48598716)
chr1 (60-115)||(23469971-23470026)
chr1 (60-115)||(24611119-24611174)
chr1 (60-115)||(35721103-35721158)
chr1 (60-115)||(37395635-37395690)
chr1 (60-115)||(47038868-47038923)
chr1 (60-115)||(50164405-50164460)
chr1 (60-114)||(9774040-9774094)
chr1 (60-124)||(20722465-20722529)
chr1 (60-115)||(11711256-11711310)
chr1 (60-115)||(13074576-13074631)
chr1 (60-115)||(20723690-20723745)
chr1 (60-115)||(24427371-24427426)
chr1 (60-115)||(26863862-26863917)
chr1 (60-115)||(26865186-26865241)
chr1 (69-115)||(2604138-2604184)
chr1 (60-112)||(17976766-17976818)
chr1 (60-112)||(17977561-17977613)
chr1 (60-112)||(27816722-27816774)
chr1 (60-115)||(11710555-11710610)
chr1 (60-115)||(34934749-34934804)
chr1 (60-115)||(35722287-35722342)
chr1 (68-115)||(45979506-45979553)
chr1 (62-115)||(10631473-10631526)
chr1 (62-127)||(35056520-35056585)
chr1 (60-112)||(27815446-27815498)
chr1 (62-122)||(31060782-31060842)
chr1 (60-115)||(39162825-39162881)
[»] chr7 (29 HSPs)
chr7 (60-115)||(35212070-35212125)
chr7 (60-115)||(24195609-24195664)
chr7 (60-115)||(41693647-41693702)
chr7 (60-116)||(28462630-28462686)
chr7 (60-115)||(13418952-13419007)
chr7 (60-115)||(31848146-31848201)
chr7 (60-115)||(42254960-42255015)
chr7 (60-114)||(12385709-12385763)
chr7 (65-115)||(31489942-31489992)
chr7 (64-114)||(38742184-38742234)
chr7 (63-115)||(5611512-5611564)
chr7 (63-115)||(31853550-31853602)
chr7 (64-120)||(36748195-36748250)
chr7 (63-115)||(36749252-36749304)
chr7 (60-112)||(39618661-39618712)
chr7 (67-115)||(39619800-39619848)
chr7 (60-115)||(17066427-17066482)
chr7 (60-115)||(32197911-32197966)
chr7 (60-115)||(41694957-41695012)
chr7 (60-114)||(11217073-11217127)
chr7 (60-114)||(32544776-32544830)
chr7 (62-115)||(32196686-32196739)
chr7 (64-115)||(554247-554298)
chr7 (60-115)||(12933421-12933476)
chr7 (60-115)||(25046242-25046297)
chr7 (60-115)||(40576768-40576823)
chr7 (60-103)||(42255904-42255947)
chr7 (60-111)||(43869914-43869965)
chr7 (60-112)||(25037755-25037807)
[»] chr6 (23 HSPs)
chr6 (62-117)||(17516162-17516217)
chr6 (60-115)||(17517311-17517366)
chr6 (62-115)||(29291361-29291414)
chr6 (60-115)||(18810534-18810589)
chr6 (60-115)||(21165248-21165303)
chr6 (60-115)||(34998143-34998198)
chr6 (60-124)||(20897499-20897563)
chr6 (60-115)||(16995453-16995508)
chr6 (60-115)||(21953208-21953263)
chr6 (60-115)||(26421845-26421900)
chr6 (60-117)||(25440675-25440732)
chr6 (62-114)||(1171655-1171707)
chr6 (60-120)||(1972397-1972457)
chr6 (63-115)||(3276369-3276421)
chr6 (62-117)||(13617529-13617584)
chr6 (62-121)||(17000281-17000340)
chr6 (63-114)||(20391217-20391268)
chr6 (70-117)||(20895958-20896005)
chr6 (66-117)||(30253547-30253598)
chr6 (60-114)||(3279501-3279555)
chr6 (69-119)||(25439646-25439696)
chr6 (62-115)||(1974156-1974209)
chr6 (62-115)||(31198617-31198670)
[»] chr5 (18 HSPs)
chr5 (60-115)||(3936580-3936635)
chr5 (63-117)||(15604063-15604116)
chr5 (60-115)||(4565395-4565450)
chr5 (60-115)||(6894012-6894067)
chr5 (60-115)||(27571131-27571186)
chr5 (60-117)||(3205104-3205161)
chr5 (60-115)||(3954054-3954109)
chr5 (64-115)||(15599767-15599818)
chr5 (60-115)||(31540498-31540553)
chr5 (60-115)||(3938062-3938117)
chr5 (77-120)||(25252638-25252681)
chr5 (77-120)||(25316423-25316466)
chr5 (64-115)||(27570058-27570109)
chr5 (69-115)||(35604421-35604467)
chr5 (62-115)||(37271361-37271414)
chr5 (63-115)||(14809165-14809217)
chr5 (60-116)||(25254133-25254189)
chr5 (60-116)||(25317923-25317979)
[»] chr8 (30 HSPs)
chr8 (63-120)||(28997998-28998055)
chr8 (63-115)||(14197827-14197879)
chr8 (62-117)||(3483633-3483688)
chr8 (60-115)||(10717123-10717178)
chr8 (60-115)||(10718450-10718505)
chr8 (60-115)||(22534724-22534779)
chr8 (60-115)||(28996836-28996891)
chr8 (60-115)||(36588224-36588279)
chr8 (60-115)||(45517962-45518017)
chr8 (62-115)||(1420446-1420499)
chr8 (62-115)||(39440426-39440479)
chr8 (60-115)||(4182624-4182679)
chr8 (60-115)||(22272272-22272327)
chr8 (60-115)||(22533319-22533374)
chr8 (63-122)||(38455442-38455501)
chr8 (60-115)||(39439926-39439981)
chr8 (60-121)||(4183981-4184042)
chr8 (62-115)||(41847184-41847237)
chr8 (60-115)||(3031545-3031600)
chr8 (60-115)||(30124225-30124280)
chr8 (60-115)||(38456732-38456787)
chr8 (60-115)||(38658483-38658538)
chr8 (67-114)||(41357375-41357422)
chr8 (65-115)||(6783580-6783630)
chr8 (62-120)||(10873225-10873283)
chr8 (62-115)||(20984148-20984201)
chr8 (60-117)||(45516397-45516454)
chr8 (60-112)||(1376940-1376992)
chr8 (60-112)||(1385557-1385609)
chr8 (62-122)||(34963609-34963669)
[»] chr4 (32 HSPs)
chr4 (60-121)||(22204051-22204112)
chr4 (60-120)||(42359348-42359408)
chr4 (65-115)||(41933820-41933870)
chr4 (63-115)||(3880501-3880553)
chr4 (63-115)||(32699319-32699371)
chr4 (60-115)||(16573380-16573435)
chr4 (60-115)||(33137230-33137285)
chr4 (60-115)||(45618287-45618342)
chr4 (60-115)||(54121702-54121757)
chr4 (62-115)||(34659708-34659761)
chr4 (66-114)||(41935078-41935126)
chr4 (67-115)||(44705301-44705349)
chr4 (60-115)||(3879088-3879143)
chr4 (60-115)||(19674416-19674471)
chr4 (60-115)||(45619733-45619788)
chr4 (78-115)||(5259171-5259208)
chr4 (62-115)||(19675624-19675677)
chr4 (62-127)||(26412529-26412594)
chr4 (63-115)||(33134893-33134945)
chr4 (60-112)||(54120759-54120811)
chr4 (66-117)||(16916067-16916118)
chr4 (60-95)||(40198596-40198631)
chr4 (60-115)||(42358034-42358089)
chr4 (61-115)||(4211563-4211617)
chr4 (60-114)||(17371847-17371901)
chr4 (62-115)||(12152438-12152491)
chr4 (62-115)||(14487804-14487857)
chr4 (62-115)||(46292394-46292447)
chr4 (62-114)||(5797484-5797536)
chr4 (66-114)||(35054665-35054713)
chr4 (67-115)||(38166497-38166545)
chr4 (60-104)||(44706366-44706410)
[»] scaffold0516 (1 HSPs)
scaffold0516 (63-115)||(1140-1192)
[»] scaffold0002 (4 HSPs)
scaffold0002 (60-112)||(344942-344994)
scaffold0002 (63-115)||(345902-345954)
scaffold0002 (63-115)||(374337-374389)
scaffold0002 (70-115)||(376381-376426)
[»] scaffold0517 (1 HSPs)
scaffold0517 (60-115)||(11524-11579)
[»] scaffold0230 (1 HSPs)
scaffold0230 (60-115)||(433-488)
[»] scaffold0106 (2 HSPs)
scaffold0106 (60-115)||(30909-30964)
scaffold0106 (60-115)||(29731-29786)
[»] scaffold0001 (2 HSPs)
scaffold0001 (60-115)||(120987-121042)
scaffold0001 (60-115)||(119595-119650)
[»] scaffold0095 (1 HSPs)
scaffold0095 (62-115)||(42759-42812)
[»] scaffold0562 (1 HSPs)
scaffold0562 (60-115)||(9924-9979)


Alignment Details
Target: chr2 (Bit Score: 172; Significance: 2e-92; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 63 - 246
Target Start/End: Original strand, 23863055 - 23863238
Alignment:
Q  63 agggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttagtcaaatatatatcaccactattcgatcaggttgttaagcaactttga 162  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23863055 agggatcaaaacccaaactcgccatatttgcagagaccaaaaacatattttagtcaaatatatatcaccactattcgatcaggttgttaagcaactttga 23863154  T
Q  163 attacggtaaacgtaaacccttaaggagacagatactaatcaagcacgctttacatcttcaaaagataccacttcttctcactc 246  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  23863155 attacggtaaacgtaaacccttaaggagacagatactaatcaagcacgctttacatcttcaaaagatactacttcttttcactc 23863238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 60 - 114
Target Start/End: Original strand, 36837780 - 36837834
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatatttta 114  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  36837780 accagggaccaaaacccaaactcgctatatttgcagagaccaaaaatatatttta 36837834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 60 - 115
Target Start/End: Complemental strand, 1777526 - 1777471
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||||||||| ||||||||| |||||||||| |||||||||||||||||||    
T  1777526 accagggaccaaaactcaaactcgctatatttgcagggaccaaaaacatattttag 1777471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 2412430 - 2412485
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||    
T  2412430 accagggactaaaacccaaactcgctatatttgcagggaccaaaaacatattttag 2412485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 60 - 115
Target Start/End: Complemental strand, 23861809 - 23861754
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||||||||||||| |||||||| |||||||||||| |||||||||||||||||||    
T  23861809 accagggaccaaaatccaaactctccatatttgcagggaccaaaaacatattttag 23861754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 60 - 115
Target Start/End: Complemental strand, 25977927 - 25977872
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||||||||||||||||| | |||||||||| |||||||||||||||||||    
T  25977927 accagggaccaaaacccaaactcactatatttgcagggaccaaaaacatattttag 25977872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 25979253 - 25979308
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||||||||||||||||||| |||| |||||||||| |||||||||||||||||||    
T  25979253 accagggaccaaaacccaaattcgctatatttgcagggaccaaaaacatattttag 25979308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 116
Target Start/End: Original strand, 8810705 - 8810761
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttagt 116  Q
    ||||||||  |||| ||||| |||| |||||||||||||||||||||||||||||||    
T  8810705 accagggattaaaatccaaattcgctatatttgcagagaccaaaaacatattttagt 8810761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 19604921 - 19604976
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||||||||||||||   ||||||||| ||| |||||||||||||||||||    
T  19604921 accagggaccaaaacccaaatgagccatatttacagggaccaaaaacatattttag 19604976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 114
Target Start/End: Original strand, 24754171 - 24754214
Alignment:
Q  71 aaacccaaactcgccatatttgcagagaccaaaaacatatttta 114  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||    
T  24754171 aaacccaaattcgccatatttgcagggaccaaaaacatatttta 24754214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 25283274 - 25283329
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||||||| |||||| |||| |||| |||||||||| |||||||||||||||||||    
T  25283274 accagggatcaaaactcaaattcgctatatttgcagtgaccaaaaacatattttag 25283329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 115
Target Start/End: Complemental strand, 8809654 - 8809598
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgc-agagaccaaaaacatattttag 115  Q
    |||||||||||||||||||| |||  |||||||| || |||||||||||||||||||    
T  8809654 accagggaccaaaacccaaattcgttatatttgcaagggaccaaaaacatattttag 8809598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 115
Target Start/End: Complemental strand, 25282457 - 25282409
Alignment:
Q  67 accaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||||||| |||||||| ||||||| ||| |||||||||||||||||||    
T  25282457 accaaaactcaaactcgacatatttacagggaccaaaaacatattttag 25282409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 117
Target Start/End: Complemental strand, 1138036 - 1137981
Alignment:
Q  62 cagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttagtc 117  Q
    |||||||||||||| ||||  | ||||||||||| |||||||| ||||||||||||    
T  1138036 cagggaccaaaaccaaaacgaggcatatttgcagggaccaaaaccatattttagtc 1137981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 1778792 - 1778847
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||| ||||||||||||||| |||| ||||||||||  ||||||| ||||||||||    
T  1778792 accaaggaccaaaacccaaagtcgctatatttgcaggaaccaaaagcatattttag 1778847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 115
Target Start/End: Complemental strand, 30843701 - 30843646
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||||||||||||||||||  |||||||||| ||  |||| ||||||||||    
T  30843701 accagggaccaaaacccaaactcgttatatttgcagtgattaaaagcatattttag 30843646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 124
Target Start/End: Complemental strand, 146381 - 146319
Alignment:
Q  62 cagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttagtcaaatata 124  Q
    ||||||| |||||| ||||  | ||||||||||| |||||||| |||||||||||| ||||||    
T  146381 cagggactaaaaccaaaacgaggcatatttgcagggaccaaaaccatattttagtctaatata 146319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 115
Target Start/End: Complemental strand, 18113144 - 18113091
Alignment:
Q  62 cagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||| |||||| ||||| | ||||||||||| |||||||| ||||||||||    
T  18113144 cagggactaaaaccaaaactaggcatatttgcagggaccaaaaccatattttag 18113091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 117
Target Start/End: Complemental strand, 21573993 - 21573936
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttagtc 117  Q
    |||| |||||||||  |||||| | ||||||||||| |||||||| ||||||||||||    
T  21573993 accaaggaccaaaaatcaaacttgtcatatttgcagggaccaaaagcatattttagtc 21573936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 6e-21; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 60 - 115
Target Start/End: Complemental strand, 52401074 - 52401019
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  52401074 accagggaccaaaacccaaactcgccatatttgcagggaccaaaaacatattttag 52401019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 20489360 - 20489415
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  20489360 accagggaccaaaacccaaactcgtcatatttgcagggaccaaaaacatattttag 20489415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 52403126 - 52403181
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  52403126 accagggaccaaaacccaaactcgccatatttgcagggaccaaaagcatattttag 52403181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 60 - 117
Target Start/End: Complemental strand, 20488423 - 20488366
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttagtc 117  Q
    |||||||||||||||||||| || |||||||||||| |||||||||||||||||||||    
T  20488423 accagggaccaaaacccaaattcaccatatttgcagggaccaaaaacatattttagtc 20488366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 39820606 - 39820661
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||    
T  39820606 accagggaccaaaacccaaactcgctatatttgcagggaccaaaaccatattttag 39820661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 60 - 115
Target Start/End: Complemental strand, 53121359 - 53121304
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||    
T  53121359 accagggactaaaacccaaactcgctatatttgcagggaccaaaaacatattttag 53121304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 66 - 115
Target Start/End: Complemental strand, 42446577 - 42446528
Alignment:
Q  66 gaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  42446577 gaccaaaacccaaactcgccatatttgcagggaccaaaagcatattttag 42446528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 120
Target Start/End: Complemental strand, 4705738 - 4705678
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttagtcaaa 120  Q
    |||||||||||||||| ||||||||||||||||||| || ||||| |||||||||| ||||    
T  4705738 accagggaccaaaacctaaactcgccatatttgcagggatcaaaagcatattttagccaaa 4705678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 115
Target Start/End: Complemental strand, 46026130 - 46026078
Alignment:
Q  63 agggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||||| |||||||||| |||||||||| |||||||||||||||||||    
T  46026130 agggaccaaaatccaaactcgctatatttgcagggaccaaaaacatattttag 46026078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 115
Target Start/End: Complemental strand, 45267362 - 45267307
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||||||||| ||||||||| |||||||||| || ||||||||||||||||    
T  45267362 accagggaccaaaactcaaactcgctatatttgcagggatcaaaaacatattttag 45267307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 127
Target Start/End: Original strand, 47433811 - 47433878
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttagtcaaatatatat 127  Q
    ||||||||||||||| |||| |||| |||||||||| |||||||| |||||||||| | |||||||||    
T  47433811 accagggaccaaaactcaaattcgctatatttgcagggaccaaaaccatattttagcctaatatatat 47433878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 115
Target Start/End: Complemental strand, 48033115 - 48033060
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||||||||||||| |||||||| |||||||||||  |||||||||||||||||||    
T  48033115 accagggaccaaaatccaaactcaccatatttgcaaggaccaaaaacatattttag 48033060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 48035734 - 48035789
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||||||||||||| ||||||||| ||||||||||| || ||||||||||||||||    
T  48035734 accagggaccaaaatccaaactcgtcatatttgcagggatcaaaaacatattttag 48035789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 52708619 - 52708674
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||| ||||||||||||||||||| |||||||||| |||||||| ||||||||||    
T  52708619 accagagaccaaaacccaaactcgctatatttgcagggaccaaaagcatattttag 52708674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 115
Target Start/End: Original strand, 20585648 - 20585701
Alignment:
Q  62 cagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||||||||||| |||||||||| |||||||||| || ||||||||||||||||    
T  20585648 cagggaccaaaatccaaactcgctatatttgcagggatcaaaaacatattttag 20585701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 115
Target Start/End: Complemental strand, 40476272 - 40476223
Alignment:
Q  66 gaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||||||| |||||||||| |||||||||| |||||||||||||||||||    
T  40476272 gaccaaaatccaaactcgctatatttgcagggaccaaaaacatattttag 40476223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 112
Target Start/End: Original strand, 977848 - 977900
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattt 112  Q
    |||| ||||||||||||||||||| ||||||||||| |||||||| |||||||    
T  977848 accaaggaccaaaacccaaactcgtcatatttgcagggaccaaaagcatattt 977900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 63 - 115
Target Start/End: Original strand, 40477379 - 40477431
Alignment:
Q  63 agggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||||||||||||||||||||  |||||||||| |||||||| ||||||||||    
T  40477379 agggaccaaaacccaaactcgttatatttgcagggaccaaaatcatattttag 40477431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 63 - 115
Target Start/End: Original strand, 54437472 - 54437524
Alignment:
Q  63 agggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||||||||||| |||| |||| |||||||||| |||||||||||||||||||    
T  54437472 agggaccaaaactcaaattcgctatatttgcagggaccaaaaacatattttag 54437524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 115
Target Start/End: Original strand, 38505585 - 38505636
Alignment:
Q  64 gggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||||| |||||||||||||||||||| || ||||| ||||||||||    
T  38505585 gggaccaaaactcaaactcgccatatttgcagggagcaaaagcatattttag 38505636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 114
Target Start/End: Complemental strand, 42444083 - 42444040
Alignment:
Q  71 aaacccaaactcgccatatttgcagagaccaaaaacatatttta 114  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||    
T  42444083 aaacccaaacttgccatatttgcagggaccaaaaacatatttta 42444040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 45268572 - 45268627
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||||||||||||||||||||| || |||||||||| ||  |||||||||||||||    
T  45268572 accagggaccaaaacccaaacttgctatatttgcagggattaaaaacatattttag 45268627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 114
Target Start/End: Complemental strand, 52707591 - 52707539
Alignment:
Q  62 cagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatatttta 114  Q
    ||||||||||||| |||| |||| |||||||||  ||||||||||||||||||    
T  52707591 cagggaccaaaactcaaattcgctatatttgcaaggaccaaaaacatatttta 52707539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 115
Target Start/End: Complemental strand, 32635651 - 32635596
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||||||||||||||||||| |||||| ||  ||| ||||| |||||||||    
T  32635651 accagggaccaaaacccaaactcgctatatttacaaggacaaaaaatatattttag 32635596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 32637190 - 32637245
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||||| |||||||||||||||||| | |||| ||| |||||||| ||||||||||    
T  32637190 accaggaaccaaaacccaaactcgctacatttacagggaccaaaagcatattttag 32637245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 114
Target Start/End: Complemental strand, 37845455 - 37845408
Alignment:
Q  67 accaaaacccaaactcgccatatttgcagagaccaaaaacatatttta 114  Q
    |||||||  ||||||| | |||||||||||||||||||||||||||||    
T  37845455 accaaaatacaaactcactatatttgcagagaccaaaaacatatttta 37845408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 115
Target Start/End: Complemental strand, 39819369 - 39819314
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||||||||  ||||||||| |||||||||| ||| |||| ||||||||||    
T  39819369 accagggaccaaaattcaaactcgctatatttgcagggactaaaaccatattttag 39819314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 115
Target Start/End: Complemental strand, 43641200 - 43641145
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||||| || |||||||||| |||||||||| ||| |||| ||||||||||    
T  43641200 accagggaccataatccaaactcgctatatttgcagggactaaaagcatattttag 43641145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 46027419 - 46027474
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||||||||  ||||||||| |||||||||| ||||||||  |||||||||    
T  46027419 accagggaccaaaattcaaactcgctatatttgcagggaccaaaagtatattttag 46027474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 115
Target Start/End: Complemental strand, 51004195 - 51004144
Alignment:
Q  64 gggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||||||||||||||| ||||||||||| ||| | | |||||||||||||||    
T  51004195 gggaccaaaacccaaattcgccatatttacagggtctaaaaacatattttag 51004144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 114
Target Start/End: Original strand, 50563813 - 50563867
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatatttta 114  Q
    ||||| |||||||| |||||||||  |||||| ||||||| ||||||||||||||    
T  50563813 accagcgaccaaaatccaaactcgttatattttcagagactaaaaacatatttta 50563867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 115
Target Start/End: Original strand, 45002330 - 45002383
Alignment:
Q  62 cagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||| |||||| ||||  | |||||||||||||||||||| ||||||||||    
T  45002330 cagggactaaaaccaaaacgaggcatatttgcagagaccaaaaccatattttag 45002383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 127
Target Start/End: Complemental strand, 50196354 - 50196289
Alignment:
Q  62 cagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttagtcaaatatatat 127  Q
    ||||||| |||||| ||||  | ||||||||||| ||| |||| ||||||||||||||||| ||||    
T  50196354 cagggactaaaaccaaaacgaggcatatttgcagggactaaaaccatattttagtcaaataaatat 50196289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 115
Target Start/End: Original strand, 3417813 - 3417849
Alignment:
Q  79 actcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||||||| ||| |||||||||||||||||||    
T  3417813 actcgccatatttacagggaccaaaaacatattttag 3417849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 115
Target Start/End: Complemental strand, 9855232 - 9855180
Alignment:
Q  63 agggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||||| |||||||||| |||||| ||| || ||||| ||||||||||    
T  9855232 agggaccaaaatccaaactcgctatatttacagggatcaaaatcatattttag 9855180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 117
Target Start/End: Complemental strand, 35533311 - 35533279
Alignment:
Q  85 catatttgcagagaccaaaaacatattttagtc 117  Q
    |||||||||||||||||||| ||||||||||||    
T  35533311 catatttgcagagaccaaaaccatattttagtc 35533279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 4e-19; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 63 - 115
Target Start/End: Complemental strand, 24609973 - 24609921
Alignment:
Q  63 agggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  24609973 agggaccaaaacccaaactcgccatatttgcagggaccaaaaacatattttag 24609921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 9774890 - 9774945
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||    
T  9774890 accagggaccaaaacccaaactcgctatatttgcagggaccaaaagcatattttag 9774945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 60 - 115
Target Start/End: Complemental strand, 27262965 - 27262910
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||||||||| ||||||||| |||||||||| |||||||||||||||||||    
T  27262965 accagggaccaaaacacaaactcgctatatttgcagggaccaaaaacatattttag 27262910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 27264218 - 27264273
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||    
T  27264218 accagggaccaaaacccaaactcgctatatttgcagggaccaaaatcatattttag 27264273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 39163026 - 39163081
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||||||||||||| |||||||||||||||| |||||||| ||||||||||    
T  39163026 accagggaccaaaacccaacctcgccatatttgcagggaccaaaagcatattttag 39163081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 46075052 - 46075107
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||||||||||||||||||| |||||||||| || ||||||||||||||||    
T  46075052 accagggaccaaaacccaaactcgctatatttgcagggatcaaaaacatattttag 46075107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 62 - 120
Target Start/End: Complemental strand, 51240174 - 51240116
Alignment:
Q  62 cagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttagtcaaa 120  Q
    |||||| ||||| ||||| |||| |||||||||||||||||||||||||||||||||||    
T  51240174 cagggatcaaaatccaaattcgctatatttgcagagaccaaaaacatattttagtcaaa 51240116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 62 - 115
Target Start/End: Original strand, 48588965 - 48589018
Alignment:
Q  62 cagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||||||||||||||| |||||||| ||| |||||||||||||||||||    
T  48588965 cagggaccaaaacccaaactcaccatatttacagggaccaaaaacatattttag 48589018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 62 - 115
Target Start/End: Original strand, 48594052 - 48594105
Alignment:
Q  62 cagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||||| ||||||||||||||||||||||| ||| |||||||||||||||||||    
T  48594052 cagggatcaaaacccaaactcgccatatttacagggaccaaaaacatattttag 48594105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 62 - 115
Target Start/End: Original strand, 48598663 - 48598716
Alignment:
Q  62 cagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||||| ||||||||||||||||||||||| ||| |||||||||||||||||||    
T  48598663 cagggatcaaaacccaaactcgccatatttacagggaccaaaaacatattttag 48598716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 23469971 - 23470026
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||||||| ||||||| |||||||| |||||||||| |||||||||||||||||||    
T  23469971 accagggatcaaaaccgaaactcgctatatttgcagggaccaaaaacatattttag 23470026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 24611119 - 24611174
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||||||||| |||||||| ||||||| ||| |||||||||||||||||||    
T  24611119 accagggaccaaaactcaaactcgtcatatttacagggaccaaaaacatattttag 24611174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 115
Target Start/End: Complemental strand, 35721158 - 35721103
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||||||||||||||||||| |||  |||||||||| |||||||||||||||||||    
T  35721158 accagggaccaaaacccaaattcgttatatttgcagggaccaaaaacatattttag 35721103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 115
Target Start/End: Complemental strand, 37395690 - 37395635
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||||||||||||||  ||| |||||||||| |||||||||||||||||||    
T  37395690 accagggaccaaaacccaaatacgctatatttgcagggaccaaaaacatattttag 37395635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 115
Target Start/End: Complemental strand, 47038923 - 47038868
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||||||||||||||||||||| || |||||||||| ||| |||||||||||||||    
T  47038923 accagggaccaaaacccaaactagctatatttgcagggactaaaaacatattttag 47038868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 115
Target Start/End: Complemental strand, 50164460 - 50164405
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||| |||||||||| |||||||||||||||||||| |||||||| ||||||||||    
T  50164460 accaaggaccaaaactcaaactcgccatatttgcagggaccaaaagcatattttag 50164405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 114
Target Start/End: Complemental strand, 9774094 - 9774040
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatatttta 114  Q
    ||||||||||||||| ||||||||  |||||||||| ||||||||||||||||||    
T  9774094 accagggaccaaaactcaaactcgttatatttgcagggaccaaaaacatatttta 9774040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 124
Target Start/End: Complemental strand, 20722529 - 20722465
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttagtcaaatata 124  Q
    |||||||||||||||||||| |||| |||||||||| |||||||| || ||||||| ||| ||||    
T  20722529 accagggaccaaaacccaaattcgctatatttgcagggaccaaaagcacattttagccaattata 20722465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 11711256 - 11711310
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||||||| |||||| |||| |||||||||| |||||||||||||||||||    
T  11711256 accagggaccaaa-cccaaattcgctatatttgcagggaccaaaaacatattttag 11711310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 13074576 - 13074631
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||||||||| |||||||| |||||||||||  |||||||| |||||||||    
T  13074576 accagggaccaaaactcaaactcgtcatatttgcaggaaccaaaaatatattttag 13074631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 20723690 - 20723745
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||| ||||| |||| |||| |||||||||| |||||||||||||||||||    
T  20723690 accagggactaaaactcaaattcgctatatttgcagggaccaaaaacatattttag 20723745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 24427371 - 24427426
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||| ||||| ||||||||| ||||||| || |||||||||||||||||||    
T  24427371 accagggactaaaactcaaactcgctatatttgtagggaccaaaaacatattttag 24427426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 115
Target Start/End: Complemental strand, 26863917 - 26863862
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||||||||| |||| |||| |||||||||| ||||||||||| |||||||    
T  26863917 accagggaccaaaactcaaattcgctatatttgcagggaccaaaaacacattttag 26863862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 26865186 - 26865241
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||| |||| ||||| |||| |||||||||||||||||||| |||||||||    
T  26865186 accagggactaaaatccaaattcgctatatttgcagagaccaaaaatatattttag 26865241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 115
Target Start/End: Original strand, 2604138 - 2604184
Alignment:
Q  69 caaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||||||||||||| |||||||||||| ||| |||||||||||||||    
T  2604138 caaaacccaaactccccatatttgcagggactaaaaacatattttag 2604184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 112
Target Start/End: Complemental strand, 17976818 - 17976766
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattt 112  Q
    |||||||||||||||||||| |||| ||||||||||  ||||||| |||||||    
T  17976818 accagggaccaaaacccaaattcgctatatttgcaggaaccaaaaccatattt 17976766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 112
Target Start/End: Original strand, 17977561 - 17977613
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattt 112  Q
    |||| ||||||||||||||| |||| |||||||||| |||||||| |||||||    
T  17977561 accaaggaccaaaacccaaattcgctatatttgcagggaccaaaaccatattt 17977613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 112
Target Start/End: Original strand, 27816722 - 27816774
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattt 112  Q
    |||||||||||||||||||| | || |||||||||| |||||||| |||||||    
T  27816722 accagggaccaaaacccaaattggctatatttgcagggaccaaaaccatattt 27816774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 115
Target Start/End: Complemental strand, 11710610 - 11710555
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||||||||||||| ||||  |||||| ||| || ||||||||||||||||    
T  11710610 accagggaccaaaacccaacctcgttatatttacagggatcaaaaacatattttag 11710555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 34934749 - 34934804
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||| ||||||||||||||| |||| |||||||||| ||| |||| ||||||||||    
T  34934749 accaaggaccaaaacccaaattcgctatatttgcagggacaaaaagcatattttag 34934804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 35722287 - 35722342
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||| |||||||| ||||| |||| |||||| ||| |||||||||||||||||||    
T  35722287 accagagaccaaaatccaaattcgctatatttacagggaccaaaaacatattttag 35722342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 115
Target Start/End: Original strand, 45979506 - 45979553
Alignment:
Q  68 ccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||| |||| |||| |||||||||| |||||||||||||||||||    
T  45979506 ccaaaactcaaattcgctatatttgcagggaccaaaaacatattttag 45979553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 115
Target Start/End: Original strand, 10631473 - 10631526
Alignment:
Q  62 cagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||| |||||| ||||  ||||||||||||| |||||||| ||||||||||    
T  10631473 cagggactaaaaccaaaacgagccatatttgcagggaccaaaaccatattttag 10631526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 127
Target Start/End: Complemental strand, 35056585 - 35056520
Alignment:
Q  62 cagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttagtcaaatatatat 127  Q
    ||||||| |||||| ||||  | ||||||||||| |||||||| |||||||||| || ||||||||    
T  35056585 cagggactaaaaccaaaacgagacatatttgcagggaccaaaaccatattttagccatatatatat 35056520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 112
Target Start/End: Complemental strand, 27815498 - 27815446
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattt 112  Q
    |||||||||||||||||||| | || |||||||||| ||||| || |||||||    
T  27815498 accagggaccaaaacccaaattggctatatttgcagggaccagaaccatattt 27815446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 122
Target Start/End: Complemental strand, 31060842 - 31060782
Alignment:
Q  62 cagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttagtcaaata 122  Q
    ||||||| |||||| ||||  | ||||||||||| |||||||| |||||||||| ||||||    
T  31060842 cagggactaaaaccaaaacaagacatatttgcagggaccaaaaccatattttagccaaata 31060782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 115
Target Start/End: Complemental strand, 39162881 - 39162825
Alignment:
Q  60 accagggaccaaaacccaaactcgcca-tatttgcagagaccaaaaacatattttag 115  Q
    |||| ||||||||| |||||||||||| ||||||||| |||||||| |||| |||||    
T  39162881 accaaggaccaaaatccaaactcgccattatttgcagggaccaaaagcataatttag 39162825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 2e-18; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 60 - 115
Target Start/End: Complemental strand, 35212125 - 35212070
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  35212125 accagggaccaaaacccaaactcgtcatatttgcagggaccaaaaacatattttag 35212070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 60 - 115
Target Start/End: Complemental strand, 24195664 - 24195609
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||||||| |||||||||||||||| |||||||||| |||||||||||||||||||    
T  24195664 accagggagcaaaacccaaactcgctatatttgcagggaccaaaaacatattttag 24195609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 60 - 115
Target Start/End: Complemental strand, 41693702 - 41693647
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||||||||||||||||||| ||||||||||||||| || ||||||||||||||||    
T  41693702 accagggaccaaaacccaaattcgccatatttgcagggatcaaaaacatattttag 41693647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 116
Target Start/End: Original strand, 28462630 - 28462686
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttagt 116  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||| |||||||||||    
T  28462630 accagggatcaaaacccaaattcgtcatatttgcagagaccaaaagcatattttagt 28462686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 115
Target Start/End: Complemental strand, 13419007 - 13418952
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||||||||||| ||||||| |||| |||||||||| |||||||||||||||||||    
T  13419007 accagggaccaatacccaaattcgcaatatttgcagggaccaaaaacatattttag 13418952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 31848146 - 31848201
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||||||||||||||||||| |||| |||||||||| ||| |||||||||||||||    
T  31848146 accagggaccaaaacccaaattcgctatatttgcagggactaaaaacatattttag 31848201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 115
Target Start/End: Complemental strand, 42255015 - 42254960
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||||||||| |||||||||||||||| ||| |||||||| ||||||||||    
T  42255015 accagggaccaaaactcaaactcgccatatttacagggaccaaaagcatattttag 42254960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 114
Target Start/End: Original strand, 12385709 - 12385763
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatatttta 114  Q
    |||||||||||||| |||||||||| |||||||||| |||||||| |||||||||    
T  12385709 accagggaccaaaatccaaactcgctatatttgcagggaccaaaatcatatttta 12385763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 65 - 115
Target Start/End: Original strand, 31489942 - 31489992
Alignment:
Q  65 ggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||||||||||||||||||  |||||||||| |||||||||||||||||||    
T  31489942 ggaccaaaacccaaactcgttatatttgcagggaccaaaaacatattttag 31489992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 64 - 114
Target Start/End: Complemental strand, 38742234 - 38742184
Alignment:
Q  64 gggaccaaaacccaaactcgccatatttgcagagaccaaaaacatatttta 114  Q
    ||||||||||||||||||||| |||||||||| ||| ||||||||||||||    
T  38742234 gggaccaaaacccaaactcgctatatttgcagggactaaaaacatatttta 38742184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 63 - 115
Target Start/End: Original strand, 5611512 - 5611564
Alignment:
Q  63 agggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||||| ||||||||||||||| |||||||||| |||||||| ||||||||||    
T  5611512 agggacgaaaacccaaactcgctatatttgcagggaccaaaatcatattttag 5611564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 63 - 115
Target Start/End: Complemental strand, 31853602 - 31853550
Alignment:
Q  63 agggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||||| |||||||| | |||||||||| |||||||||||||||||||    
T  31853602 agggaccaaaatccaaactcacaatatttgcagggaccaaaaacatattttag 31853550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 64 - 120
Target Start/End: Complemental strand, 36748250 - 36748195
Alignment:
Q  64 gggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttagtcaaa 120  Q
    ||||||||||||||||||| | |||||||||| ||||||||||||||||||| ||||    
T  36748250 gggaccaaaacccaaactctc-atatttgcagggaccaaaaacatattttagccaaa 36748195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 63 - 115
Target Start/End: Original strand, 36749252 - 36749304
Alignment:
Q  63 agggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||||||||||| |||||||| ||||||||||  |||||||||||||||||||    
T  36749252 agggaccaaaactcaaactcgtcatatttgcaatgaccaaaaacatattttag 36749304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 112
Target Start/End: Complemental strand, 39618712 - 39618661
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattt 112  Q
    |||||||||||||||||||||||||||| |||||| ||| |||||||||||||    
T  39618712 accagggaccaaaacccaaactcgccatttttgcataga-caaaaacatattt 39618661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 67 - 115
Target Start/End: Original strand, 39619800 - 39619848
Alignment:
Q  67 accaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||||||||||||||||||||||  |||||||| ||||||||||    
T  39619800 accaaaacccaaactcgccatatttgcatggaccaaaagcatattttag 39619848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 115
Target Start/End: Complemental strand, 17066482 - 17066427
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||||||||||||||||||| |||||||||| ||  |||| ||||||||||    
T  17066482 accagggaccaaaacccaaactcgctatatttgcagggattaaaagcatattttag 17066427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 32197911 - 32197966
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||| ||||||||||||||| |||| |||||||||| |||||||| ||||||||||    
T  32197911 accaaggaccaaaacccaaattcgctatatttgcagggaccaaaagcatattttag 32197966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 41694957 - 41695012
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||||||||| ||||||||| |||||||||| ||  |||||||||||||||    
T  41694957 accagggaccaaaactcaaactcgctatatttgcagggatgaaaaacatattttag 41695012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 60 - 114
Target Start/End: Original strand, 11217073 - 11217127
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatatttta 114  Q
    ||||||||||||||  ||||||||| |||||||||| |||||||| |||||||||    
T  11217073 accagggaccaaaattcaaactcgctatatttgcagggaccaaaagcatatttta 11217127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 60 - 114
Target Start/End: Original strand, 32544776 - 32544830
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatatttta 114  Q
    |||| ||||||||||||||| |||| |||||||||| |||||||| |||||||||    
T  32544776 accaaggaccaaaacccaaattcgctatatttgcagggaccaaaatcatatttta 32544830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 115
Target Start/End: Complemental strand, 32196739 - 32196686
Alignment:
Q  62 cagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||||||||||| |||||  ||| |||||||||| |||||||||||||||||||    
T  32196739 cagggaccaaaatccaaatacgctatatttgcagggaccaaaaacatattttag 32196686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 115
Target Start/End: Complemental strand, 554298 - 554247
Alignment:
Q  64 gggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||||||||||||||| |||||||||| |||||| |  |||||||||    
T  554298 gggaccaaaacccaaactcgctatatttgcagggaccaatattatattttag 554247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 115
Target Start/End: Complemental strand, 12933476 - 12933421
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||||||||  ||||||| | |||||||||| |||||||| ||||||||||    
T  12933476 accagggaccaaaattcaaactcactatatttgcagggaccaaaagcatattttag 12933421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 25046242 - 25046297
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||| ||||||||| | ||||||||||||||||||  |||||||| ||||||||||    
T  25046242 accatggaccaaaatctaaactcgccatatttgcaaggaccaaaatcatattttag 25046297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 115
Target Start/End: Complemental strand, 40576823 - 40576768
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||| |||||||| ||||| ||| ||||||||||| |||||||| ||||||||||    
T  40576823 accagagaccaaaatccaaattcgtcatatttgcagggaccaaaagcatattttag 40576768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 103
Target Start/End: Original strand, 42255904 - 42255947
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaa 103  Q
    ||||||||||||||| |||||||| ||||||||||| |||||||    
T  42255904 accagggaccaaaactcaaactcgtcatatttgcagggaccaaa 42255947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 111
Target Start/End: Original strand, 43869914 - 43869965
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatatt 111  Q
    |||||||||||||||||||| | || |||||||||| |||||||| ||||||    
T  43869914 accagggaccaaaacccaaattggctatatttgcagggaccaaaaccatatt 43869965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 112
Target Start/End: Complemental strand, 25037807 - 25037755
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattt 112  Q
    ||||||||||||||  |||||||| ||||||||||| ||| |||| |||||||    
T  25037807 accagggaccaaaattcaaactcgtcatatttgcagggactaaaatcatattt 25037755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 2e-18; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 62 - 117
Target Start/End: Complemental strand, 17516217 - 17516162
Alignment:
Q  62 cagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttagtc 117  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  17516217 cagggaccaaaacccaaactcaccatatttgcagggaccaaaaacatattttagtc 17516162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 17517311 - 17517366
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  17517311 accagggaccaaaactcaaactcgccatatttgcagggaccaaaaacatattttag 17517366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 62 - 115
Target Start/End: Complemental strand, 29291414 - 29291361
Alignment:
Q  62 cagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||||||||||||||||||||||||||||||||  |||||||| ||||||||||    
T  29291414 cagggaccaaaacccaaactcgccatatttgcaaggaccaaaagcatattttag 29291361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 115
Target Start/End: Complemental strand, 18810589 - 18810534
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||||||||||||||||| | |||||||||| |||||||| ||||||||||    
T  18810589 accagggaccaaaacccaaactcactatatttgcagggaccaaaatcatattttag 18810534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 115
Target Start/End: Complemental strand, 21165303 - 21165248
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||||||||| ||||||||| |||||||||| |||||||| ||||||||||    
T  21165303 accagggaccaaaacacaaactcgctatatttgcagggaccaaaagcatattttag 21165248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 34998143 - 34998198
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||||||||||||||||||| |||||||||| || ||||| ||||||||||    
T  34998143 accagggaccaaaacccaaactcgctatatttgcagggatcaaaagcatattttag 34998198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 124
Target Start/End: Original strand, 20897499 - 20897563
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttagtcaaatata 124  Q
    |||||||||||||||||||| || | |||||||||| |||||||| |||||||||| ||| ||||    
T  20897499 accagggaccaaaacccaaattcactatatttgcagggaccaaaaccatattttagccaattata 20897563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 115
Target Start/End: Complemental strand, 16995508 - 16995453
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||||||||||||||||||| ||   |||||||||| |||||||||||||||||||    
T  16995508 accagggaccaaaacccaaattctttatatttgcagggaccaaaaacatattttag 16995453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 115
Target Start/End: Complemental strand, 21953263 - 21953208
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||||||||||||| ||||| |||| |||||||||| |||||||| ||||||||||    
T  21953263 accagggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttag 21953208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 26421845 - 26421900
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||| ||||| |||| |||| ||||||||||||||||||||||| ||||||    
T  26421845 accagggactaaaactcaaattcgctatatttgcagagaccaaaaacatgttttag 26421900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 60 - 117
Target Start/End: Original strand, 25440675 - 25440732
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttagtc 117  Q
    ||||||||||||||  ||||||||||||||||| |  ||||||||| |||||||||||    
T  25440675 accagggaccaaaattcaaactcgccatatttgtaaggaccaaaaatatattttagtc 25440732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 114
Target Start/End: Original strand, 1171655 - 1171707
Alignment:
Q  62 cagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatatttta 114  Q
    |||||||||||| |||||||||  |||||||||| || |||||||||||||||    
T  1171655 cagggaccaaaaaccaaactcgttatatttgcagggatcaaaaacatatttta 1171707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 120
Target Start/End: Complemental strand, 1972457 - 1972397
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttagtcaaa 120  Q
    ||||| ||| |||||||||| ||||  ||||||||| ||||||||||||||||||| ||||    
T  1972457 accagagactaaaacccaaattcgctttatttgcagggaccaaaaacatattttagccaaa 1972397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 115
Target Start/End: Complemental strand, 3276421 - 3276369
Alignment:
Q  63 agggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||||| |||| ||||| |||| |||||||||| |||||||||||||||||||    
T  3276421 agggactaaaatccaaattcgctatatttgcagggaccaaaaacatattttag 3276369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 117
Target Start/End: Complemental strand, 13617584 - 13617529
Alignment:
Q  62 cagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttagtc 117  Q
    ||||||| |||||| ||||  ||||||||||||| |||||||| ||||||||||||    
T  13617584 cagggactaaaaccaaaacgagccatatttgcagggaccaaaaccatattttagtc 13617529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 121
Target Start/End: Original strand, 17000281 - 17000340
Alignment:
Q  62 cagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttagtcaaat 121  Q
    ||||||||||||||||||||| | | |||||||| ||||||||  ||||||||| |||||    
T  17000281 cagggaccaaaacccaaactcactacatttgcagggaccaaaagtatattttagccaaat 17000340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 114
Target Start/End: Complemental strand, 20391268 - 20391217
Alignment:
Q  63 agggaccaaaacccaaactcgccatatttgcagagaccaaaaacatatttta 114  Q
    ||||||||||||||||| || | |||||||||| |||||||| |||||||||    
T  20391268 agggaccaaaacccaaattcactatatttgcagggaccaaaagcatatttta 20391217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 117
Target Start/End: Complemental strand, 20896005 - 20895958
Alignment:
Q  70 aaaacccaaactcgccatatttgcagagaccaaaaacatattttagtc 117  Q
    ||||| |||| |||| |||||||||| |||||||||||||||||||||    
T  20896005 aaaactcaaattcgctatatttgcagggaccaaaaacatattttagtc 20895958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 117
Target Start/End: Original strand, 30253547 - 30253598
Alignment:
Q  66 gaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttagtc 117  Q
    ||||||||| || ||||||  ||||||||| |||||||||||||||||||||    
T  30253547 gaccaaaactcatactcgctgtatttgcagggaccaaaaacatattttagtc 30253598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 114
Target Start/End: Original strand, 3279501 - 3279555
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatatttta 114  Q
    |||||| |||||||  ||||||||| |||||||||| || |||||||||||||||    
T  3279501 accaggaaccaaaattcaaactcgctatatttgcagggatcaaaaacatatttta 3279555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 119
Target Start/End: Complemental strand, 25439696 - 25439646
Alignment:
Q  69 caaaacccaaactcgccatatttgcagagaccaaaaacatattttagtcaa 119  Q
    ||||||||||| |||  |||||||||| ||| |||||||||||||||||||    
T  25439696 caaaacccaaaatcgttatatttgcagggactaaaaacatattttagtcaa 25439646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 115
Target Start/End: Original strand, 1974156 - 1974209
Alignment:
Q  62 cagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||||||| |||| |||| |||||||||  || ||||||||||||||||    
T  1974156 cagggaccaaaactcaaattcgctatatttgcaaggatcaaaaacatattttag 1974209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 115
Target Start/End: Complemental strand, 31198670 - 31198617
Alignment:
Q  62 cagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||| |||||| ||||  ||||||||||||| |||||||| ||||||||||    
T  31198670 cagggactaaaaccaaaacgagccatatttgcagggaccaaaaccatattttag 31198617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 2e-18; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 60 - 115
Target Start/End: Complemental strand, 3936635 - 3936580
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  3936635 accagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttag 3936580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 63 - 117
Target Start/End: Original strand, 15604063 - 15604116
Alignment:
Q  63 agggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttagtc 117  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  15604063 agggaccaaaacccaaactcgccatatttgcag-gaccaaaaacacattttagtc 15604116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 115
Target Start/End: Complemental strand, 4565450 - 4565395
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||||||||||||||||||| ||||||| || ||| |||||||||||||||    
T  4565450 accagggaccaaaacccaaactcgctatatttgtagggactaaaaacatattttag 4565395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 6894012 - 6894067
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||||||||||||||| ||||||| ||||||||||  |||||||||||||||||||    
T  6894012 accagggaccaaaacctaaactcgtcatatttgcaaggaccaaaaacatattttag 6894067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 27571131 - 27571186
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||||||| |||||||||||||||| |||||||||| |||||||| ||||||||||    
T  27571131 accagggatcaaaacccaaactcgctatatttgcagggaccaaaatcatattttag 27571186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 60 - 117
Target Start/End: Original strand, 3205104 - 3205161
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttagtc 117  Q
    |||||||||||||||||||||||  ||||||||||| || ||||| ||||||||||||    
T  3205104 accagggaccaaaacccaaactcatcatatttgcagggatcaaaagcatattttagtc 3205161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 115
Target Start/End: Complemental strand, 3954109 - 3954054
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||||||||||||||||||| |||  |||||||||  |||||||||||||||||||    
T  3954109 accagggaccaaaacccaaattcgatatatttgcaaggaccaaaaacatattttag 3954054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 115
Target Start/End: Complemental strand, 15599818 - 15599767
Alignment:
Q  64 gggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||||||||||||||| |||||||||||| || |||||||| ||||||||||    
T  15599818 gggaccaaaacccaaattcgccatatttgtagggaccaaaagcatattttag 15599767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 115
Target Start/End: Complemental strand, 31540553 - 31540498
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||||| ||||||||||||| |||  |||||||||| |||||||||||||||||||    
T  31540553 accaggtaccaaaacccaaattcgttatatttgcagggaccaaaaacatattttag 31540498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 3938062 - 3938117
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||||||||||||||| ||||| || |||||||||| ||| |||| ||||||||||    
T  3938062 accagggaccaaaacctaaacttgctatatttgcagggactaaaagcatattttag 3938117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 120
Target Start/End: Complemental strand, 25252681 - 25252638
Alignment:
Q  77 aaactcgccatatttgcagagaccaaaaacatattttagtcaaa 120  Q
    |||||||| ||||||||||||| |||||||||||||||| ||||    
T  25252681 aaactcgctatatttgcagagatcaaaaacatattttagccaaa 25252638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 120
Target Start/End: Complemental strand, 25316466 - 25316423
Alignment:
Q  77 aaactcgccatatttgcagagaccaaaaacatattttagtcaaa 120  Q
    |||||||| ||||||||||||| |||||||||||||||| ||||    
T  25316466 aaactcgctatatttgcagagatcaaaaacatattttagccaaa 25316423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 115
Target Start/End: Complemental strand, 27570109 - 27570058
Alignment:
Q  64 gggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||| |||||||||||||||| |||||||||  |||||||| ||||||||||    
T  27570109 gggaacaaaacccaaactcgctatatttgcaaggaccaaaatcatattttag 27570058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 115
Target Start/End: Complemental strand, 35604467 - 35604421
Alignment:
Q  69 caaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||||| ||||||||  ||||||||||| ||||||||||||||||||    
T  35604467 caaaactcaaactcgttatatttgcagaaaccaaaaacatattttag 35604421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 115
Target Start/End: Complemental strand, 37271414 - 37271361
Alignment:
Q  62 cagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||| |||||| ||||  | |||||||||||||||||||| ||||||||||    
T  37271414 cagggactaaaaccaaaacgaggcatatttgcagagaccaaaaccatattttag 37271361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 115
Target Start/End: Complemental strand, 14809217 - 14809165
Alignment:
Q  63 agggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||||| ||||| |||| ||||||| || || ||||||||||||||||    
T  14809217 agggaccaaaatccaaattcgctatatttgtagggatcaaaaacatattttag 14809165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 116
Target Start/End: Original strand, 25254133 - 25254189
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttagt 116  Q
    |||||||| |||||| |||||||   |||||||||| |||||||| |||||||||||    
T  25254133 accagggatcaaaactcaaactctatatatttgcagggaccaaaagcatattttagt 25254189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 116
Target Start/End: Original strand, 25317923 - 25317979
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttagt 116  Q
    |||||||| |||||| |||||||   |||||||||| |||||||| |||||||||||    
T  25317923 accagggatcaaaactcaaactctatatatttgcagggaccaaaagcatattttagt 25317979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 2e-17; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 63 - 120
Target Start/End: Original strand, 28997998 - 28998055
Alignment:
Q  63 agggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttagtcaaa 120  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||    
T  28997998 agggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagccaaa 28998055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 63 - 115
Target Start/End: Complemental strand, 14197879 - 14197827
Alignment:
Q  63 agggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  14197879 agggaccaaaatccaaactcgccatatttgcagggaccaaaaacatattttag 14197827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 62 - 117
Target Start/End: Complemental strand, 3483688 - 3483633
Alignment:
Q  62 cagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttagtc 117  Q
    ||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||    
T  3483688 cagggaccaaaactcaaactcgctatatttgcagggaccaaaaacatattttagtc 3483633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 60 - 115
Target Start/End: Complemental strand, 10717178 - 10717123
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||    
T  10717178 accagggaccaaaacccaaactcgctatatttgcagggaccaaaagcatattttag 10717123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 10718450 - 10718505
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||    
T  10718450 accagggaccaaaacccaaactcgctatatttgcagggaccaaaagcatattttag 10718505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 22534724 - 22534779
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||||||||||||||||||| |||||||||| || ||||| ||||||||||    
T  22534724 accagggaccaaaacccaaactcgctatatttgcagggatcaaaagcatattttag 22534779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 115
Target Start/End: Complemental strand, 28996891 - 28996836
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||||||||||||||||| | |||||||||| |||||||| ||||||||||    
T  28996891 accagggaccaaaacccaaactcactatatttgcagggaccaaaatcatattttag 28996836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 115
Target Start/End: Complemental strand, 36588279 - 36588224
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||||||||| ||||||||| |||||||||| |||||||| ||||||||||    
T  36588279 accagggaccaaaacgcaaactcgctatatttgcagggaccaaaagcatattttag 36588224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 45517962 - 45518017
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||||||||||||||||||| ||| |||||| |||||||| ||||||||||    
T  45517962 accagggaccaaaacccaaactcgctatacttgcagggaccaaaagcatattttag 45518017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 115
Target Start/End: Original strand, 1420446 - 1420499
Alignment:
Q  62 cagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||||||||| | |||||||||| |||||||||| |||||||||||||||||||    
T  1420446 cagggaccaatatccaaactcgctatatttgcagggaccaaaaacatattttag 1420499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 115
Target Start/End: Original strand, 39440426 - 39440479
Alignment:
Q  62 cagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||||||| |||||||||||||||||||  |||||||| ||||||||||    
T  39440426 cagggaccaaaactcaaactcgccatatttgcaaggaccaaaagcatattttag 39440479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 115
Target Start/End: Complemental strand, 4182679 - 4182624
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||||||||||||||||||| |||| |||||| ||| |||||||| ||||||||||    
T  4182679 accagggaccaaaacccaaattcgctatatttacagggaccaaaagcatattttag 4182624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 22272272 - 22272327
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||||||||||||||||||| |||| |||||||| | |||||||| ||||||||||    
T  22272272 accagggaccaaaacccaaattcgctatatttgcggggaccaaaagcatattttag 22272327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 115
Target Start/End: Complemental strand, 22533374 - 22533319
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||||||||||||||||||| |||| | ||| |||||||| ||||||||||    
T  22533374 accagggaccaaaacccaaactcgctatatatacagggaccaaaagcatattttag 22533319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 122
Target Start/End: Complemental strand, 38455501 - 38455442
Alignment:
Q  63 agggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttagtcaaata 122  Q
    |||||||||||| |||| || | |||||||||  ||||||||||||||||||||||||||    
T  38455501 agggaccaaaactcaaattcactatatttgcaaggaccaaaaacatattttagtcaaata 38455442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 115
Target Start/End: Complemental strand, 39439981 - 39439926
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||| ||||||| |||||| ||||||||||||| |||||||| ||||||||||    
T  39439981 accagggtccaaaactcaaactagccatatttgcagggaccaaaatcatattttag 39439926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 60 - 121
Target Start/End: Original strand, 4183981 - 4184042
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttagtcaaat 121  Q
    ||||||||||||||||||||| | | |||||||||| ||| |||| |||||||||| |||||    
T  4183981 accagggaccaaaacccaaacgcactatatttgcagggactaaaagcatattttagccaaat 4184042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 115
Target Start/End: Original strand, 41847184 - 41847237
Alignment:
Q  62 cagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||||||| |||| |||| |||||||||||||| |||| ||||||||||    
T  41847184 cagggaccaaaactcaaattcgctatatttgcagagactaaaagcatattttag 41847237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 3031545 - 3031600
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||||||||||||||| |||   ||||||||| ||| |||||||||||||||||||    
T  3031545 accagggaccaaaacctaaatgagccatatttacagggaccaaaaacatattttag 3031600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 30124225 - 30124280
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||||||||| |||||| ||  ||||||||| |||||||| ||||||||||    
T  30124225 accagggaccaaaactcaaacttgctttatttgcagggaccaaaagcatattttag 30124280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 38456732 - 38456787
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||||||||||||||| ||| | || |||||||||| |||||||| ||||||||||    
T  38456732 accagggaccaaaacctaaatttgctatatttgcagggaccaaaagcatattttag 38456787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 115
Target Start/End: Complemental strand, 38658538 - 38658483
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||||||||||||||||||| |||| |||||||||  ||||| || ||||||||||    
T  38658538 accagggaccaaaacccaaattcgctatatttgcatggaccagaagcatattttag 38658483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 114
Target Start/End: Original strand, 41357375 - 41357422
Alignment:
Q  67 accaaaacccaaactcgccatatttgcagagaccaaaaacatatttta 114  Q
    |||||||||||||||| ||||||||||   ||||||||||||||||||    
T  41357375 accaaaacccaaactcaccatatttgcgaggaccaaaaacatatttta 41357422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 115
Target Start/End: Complemental strand, 6783630 - 6783580
Alignment:
Q  65 ggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||||||||  |||| || |||||||||||| |||||||||||||||||||    
T  6783630 ggaccaaaattcaaattcaccatatttgcagtgaccaaaaacatattttag 6783580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 120
Target Start/End: Original strand, 10873225 - 10873283
Alignment:
Q  62 cagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttagtcaaa 120  Q
    ||||||| |||||| ||||  | |||||||||||||||||||| |||||||||| ||||    
T  10873225 cagggactaaaaccaaaacgaggcatatttgcagagaccaaaaccatattttagccaaa 10873283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 115
Target Start/End: Complemental strand, 20984201 - 20984148
Alignment:
Q  62 cagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||| |||||| ||||  ||||||||||||| |||||||| ||||||||||    
T  20984201 cagggactaaaaccaaaacgagccatatttgcagggaccaaaaccatattttag 20984148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 117
Target Start/End: Complemental strand, 45516454 - 45516397
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttagtc 117  Q
    ||||| |||||||||||||| |||| |||||| ||  ||| |||||||||||||||||    
T  45516454 accagagaccaaaacccaaattcgctatatttacatggactaaaaacatattttagtc 45516397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 112
Target Start/End: Complemental strand, 1376992 - 1376940
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattt 112  Q
    |||||||||||||| ||||| | || |||||||||| |||||||| |||||||    
T  1376992 accagggaccaaaatccaaattggctatatttgcagggaccaaaatcatattt 1376940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 112
Target Start/End: Original strand, 1385557 - 1385609
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattt 112  Q
    |||||||||||||| ||||| | || |||||||||| |||||||| |||||||    
T  1385557 accagggaccaaaatccaaattggctatatttgcagggaccaaaaccatattt 1385609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 34963609 - 34963669
Alignment:
Q  62 cagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttagtcaaata 122  Q
    ||||||| |||||| ||||  | ||||||||||| |||||||| |||||||||| ||||||    
T  34963609 cagggactaaaaccaaaacgagacatatttgcagggaccaaaaccatattttagccaaata 34963669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 2e-17; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 60 - 121
Target Start/End: Complemental strand, 22204112 - 22204051
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttagtcaaat 121  Q
    ||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||| |||||    
T  22204112 accagggactaaaacccaaactcgctatatttgcagggaccaaaaacatattttagccaaat 22204051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 60 - 120
Target Start/End: Original strand, 42359348 - 42359408
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttagtcaaa 120  Q
    |||||||||||||| |||||||||| |||||||||| ||||||||||||||||||| ||||    
T  42359348 accagggaccaaaatccaaactcgctatatttgcagggaccaaaaacatattttagccaaa 42359408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 65 - 115
Target Start/End: Complemental strand, 41933870 - 41933820
Alignment:
Q  65 ggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  41933870 ggaccaaaacccaaactcgctatatttgcagagaccaaaatcatattttag 41933820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 115
Target Start/End: Original strand, 3880501 - 3880553
Alignment:
Q  63 agggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||||||||||    
T  3880501 agggaccaaaacccaaactcgctatatttgcaggaaccaaaaacatattttag 3880553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 115
Target Start/End: Original strand, 32699319 - 32699371
Alignment:
Q  63 agggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||||||||||||||||||||| |||||| ||| |||||||||||||||||||    
T  32699319 agggaccaaaacccaaactcgctatatttacagggaccaaaaacatattttag 32699371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 115
Target Start/End: Complemental strand, 16573435 - 16573380
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||| |||||||||||||| |||||||||||| ||||||||||| ||||||||||    
T  16573435 accagagaccaaaacccaaattcgccatatttgtagagaccaaaagcatattttag 16573380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 33137230 - 33137285
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||| ||||||||||||||| |||||||||| || ||||||||||||||||    
T  33137230 accagggactaaaacccaaactcgctatatttgcagggatcaaaaacatattttag 33137285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 115
Target Start/End: Complemental strand, 45618342 - 45618287
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||||||||||||||||||| |||||||||| |||||||| ||||| ||||    
T  45618342 accagggaccaaaacccaaactcgctatatttgcagggaccaaaagcatatattag 45618287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 54121702 - 54121757
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||||||||||||||||||||||||| ||||||||| || ||||| ||||||||||    
T  54121702 accagggaccaaaacccaaactcgccgtatttgcagggagcaaaatcatattttag 54121757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 115
Target Start/End: Complemental strand, 34659761 - 34659708
Alignment:
Q  62 cagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||||||||  |||||||||||||||||| |||||||| ||||||||||    
T  34659761 cagggaccaaaaccttaactcgccatatttgcagggaccaaaagcatattttag 34659708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 114
Target Start/End: Original strand, 41935078 - 41935126
Alignment:
Q  66 gaccaaaacccaaactcgccatatttgcagagaccaaaaacatatttta 114  Q
    ||||||||||||||||||  |||||||||| ||||||||||||||||||    
T  41935078 gaccaaaacccaaactcgttatatttgcagggaccaaaaacatatttta 41935126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 67 - 115
Target Start/End: Complemental strand, 44705349 - 44705301
Alignment:
Q  67 accaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||||||| || | ||||||||||||||||||||||||||||||    
T  44705349 accaaaacccaaattcactatatttgcagagaccaaaaacatattttag 44705301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 115
Target Start/End: Complemental strand, 3879143 - 3879088
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||||||||||||| |||||||||| |||||||||| || ||||| ||||||||||    
T  3879143 accagggaccaaaatccaaactcgctatatttgcagggatcaaaagcatattttag 3879088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 115
Target Start/End: Complemental strand, 19674471 - 19674416
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||||||||| ||||||||| |||||||||  |||||||| ||||||||||    
T  19674471 accagggaccaaaactcaaactcgctatatttgcaaggaccaaaagcatattttag 19674416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 45619733 - 45619788
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||||||| ||||||| |||||||| |||||||||| ||| |||||||||||||||    
T  45619733 accagggaacaaaacctaaactcgctatatttgcagggactaaaaacatattttag 45619788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 115
Target Start/End: Original strand, 5259171 - 5259208
Alignment:
Q  78 aactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||||||||||||||||| |||||||||||||||||||    
T  5259171 aactcgccatatttgcagggaccaaaaacatattttag 5259208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 115
Target Start/End: Original strand, 19675624 - 19675677
Alignment:
Q  62 cagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||||||||||| |||||||||  |||||||||| |||||||| ||||||||||    
T  19675624 cagggaccaaaatccaaactcgttatatttgcagggaccaaaagcatattttag 19675677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 127
Target Start/End: Original strand, 26412529 - 26412594
Alignment:
Q  62 cagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttagtcaaatatatat 127  Q
    ||||||| |||||| ||||  ||||||||||||| |||||||| |||||||||| |||| ||||||    
T  26412529 cagggactaaaaccaaaacgagccatatttgcagggaccaaaaccatattttagccaaaaatatat 26412594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 115
Target Start/End: Complemental strand, 33134945 - 33134893
Alignment:
Q  63 agggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||| | ||||||||| ||||||||||| || ||||||||||||||||    
T  33134945 agggaccaatatccaaactcgtcatatttgcagggatcaaaaacatattttag 33134893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 112
Target Start/End: Complemental strand, 54120811 - 54120759
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattt 112  Q
    |||||| |||||||| ||||||||| ||||||| ||| |||||||||||||||    
T  54120811 accaggaaccaaaactcaaactcgctatatttgaagaaaccaaaaacatattt 54120759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 117
Target Start/End: Complemental strand, 16916118 - 16916067
Alignment:
Q  66 gaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttagtc 117  Q
    ||||||||| ||||||| |||||||||||| ||||||||  |||||||||||    
T  16916118 gaccaaaactcaaactcaccatatttgcagggaccaaaagtatattttagtc 16916067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 95
Target Start/End: Complemental strand, 40198631 - 40198596
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcag 95  Q
    ||||||||||||||||||||||||| ||||||||||    
T  40198631 accagggaccaaaacccaaactcgctatatttgcag 40198596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 115
Target Start/End: Complemental strand, 42358089 - 42358034
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||||||| |||||| ||||||  | |||||||||| |||||||||||||||||||    
T  42358089 accagggatcaaaactcaaacttcctatatttgcagggaccaaaaacatattttag 42358034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 115
Target Start/End: Complemental strand, 4211617 - 4211563
Alignment:
Q  61 ccagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||||||||| ||||  | ||||||||||| |||||||| ||||||||||    
T  4211617 ccagggaccaaaaccaaaacgaggcatatttgcagggaccaaaaccatattttag 4211563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 114
Target Start/End: Original strand, 17371847 - 17371901
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatatttta 114  Q
    |||||||||||||||||||| |||  |||||||||| || ||||| |||||||||    
T  17371847 accagggaccaaaacccaaattcgttatatttgcagggatcaaaagcatatttta 17371901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 115
Target Start/End: Original strand, 12152438 - 12152491
Alignment:
Q  62 cagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||||||||||||| ||||  | ||||||||||| |||||||| ||||||||||    
T  12152438 cagggaccaaaaccaaaacgagacatatttgcagggaccaaaaccatattttag 12152491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 115
Target Start/End: Complemental strand, 14487857 - 14487804
Alignment:
Q  62 cagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||||||||||||| ||||  | ||||||||||| |||||||| ||||||||||    
T  14487857 cagggaccaaaaccaaaacgaggcatatttgcagggaccaaaaccatattttag 14487804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 115
Target Start/End: Complemental strand, 46292447 - 46292394
Alignment:
Q  62 cagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||||||||||||| ||||  | ||||||||||| |||||||| ||||||||||    
T  46292447 cagggaccaaaaccaaaacgaggcatatttgcagggaccaaaaccatattttag 46292394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 114
Target Start/End: Complemental strand, 5797536 - 5797484
Alignment:
Q  62 cagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatatttta 114  Q
    ||||||| |||||| ||||  | |||||||||||||||||||| |||||||||    
T  5797536 cagggactaaaaccaaaacgagacatatttgcagagaccaaaatcatatttta 5797484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 114
Target Start/End: Complemental strand, 35054713 - 35054665
Alignment:
Q  66 gaccaaaacccaaactcgccatatttgcagagaccaaaaacatatttta 114  Q
    |||||||||||||| |||| |||||||||| ||| |||| |||||||||    
T  35054713 gaccaaaacccaaattcgctatatttgcagggactaaaatcatatttta 35054665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 115
Target Start/End: Complemental strand, 38166545 - 38166497
Alignment:
Q  67 accaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||| |||||||||| |||||||||| ||  |||||||||||||||    
T  38166545 accaaaatccaaactcgctatatttgcagggattaaaaacatattttag 38166497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 104
Target Start/End: Original strand, 44706366 - 44706410
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaa 104  Q
    |||||||| ||||||||||||||| ||||||| ||| ||||||||    
T  44706366 accagggatcaaaacccaaactcgtcatatttacagtgaccaaaa 44706410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 63 - 115
Target Start/End: Original strand, 1140 - 1192
Alignment:
Q  63 agggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  1140 agggaccaaaactcaaactcgccatatttgcagagaccaaaaatatattttag 1192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 45; Significance: 9e-17; HSPs: 4)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 60 - 112
Target Start/End: Complemental strand, 344994 - 344942
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattt 112  Q
    |||||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  344994 accagggaccaaaacccaaactcgccatatttgcagggaccaaaatcatattt 344942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 115
Target Start/End: Original strand, 345902 - 345954
Alignment:
Q  63 agggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||||||||||| |||| |||||||||| |||||||||||||||||||    
T  345902 agggaccaaaacccaaattcgctatatttgcagggaccaaaaacatattttag 345954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 63 - 115
Target Start/End: Complemental strand, 374389 - 374337
Alignment:
Q  63 agggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||||||||||||||||||||| |||||||||| || ||||| ||||||||||    
T  374389 agggaccaaaacccaaactcgctatatttgcagggatcaaaatcatattttag 374337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 115
Target Start/End: Original strand, 376381 - 376426
Alignment:
Q  70 aaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||||||||| |||||||||| |||||||| ||||||||||    
T  376381 aaaacccaaactcgctatatttgcagggaccaaaagcatattttag 376426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 11524 - 11579
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||||||||||||||  ||| |||||||||| |||||||||||||||||||    
T  11524 accagggaccaaaacccaaatacgctatatttgcagggaccaaaaacatattttag 11579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 433 - 488
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||||||||||||||||| | |||||||||| |||||||| ||||||||||    
T  433 accagggaccaaaacccaaactcactatatttgcagggaccaaaatcatattttag 488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 30909 - 30964
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||||||||||||||||| | |||||||||| |||||||| ||||||||||    
T  30909 accagggaccaaaacccaaactcactatatttgcagggaccaaaaccatattttag 30964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 115
Target Start/End: Complemental strand, 29786 - 29731
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||||||||||||| |||||||||   ||||||||| |||||||| ||||||||||    
T  29786 accagggaccaaaatccaaactcgttttatttgcagggaccaaaagcatattttag 29731  T

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Target: scaffold0001 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 120987 - 121042
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||||||||||||||||||  |||||||||| |||||||| ||||||||||    
T  120987 accagggaccaaaacccaaactcgttatatttgcagggaccaaaagcatattttag 121042  T

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Target: scaffold0001; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 115
Target Start/End: Complemental strand, 119650 - 119595
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||||||||| |||| |||| |||||||||| |||||||| ||||||||||    
T  119650 accagggaccaaaactcaaattcgctatatttgcagggaccaaaagcatattttag 119595  T

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Target: scaffold0095 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 115
Target Start/End: Original strand, 42759 - 42812
Alignment:
Q  62 cagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    ||||||||||||| |||||||||||||||||||  |||||||| ||||||||||    
T  42759 cagggaccaaaactcaaactcgccatatttgcaaggaccaaaagcatattttag 42812  T

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Target: scaffold0562 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0562
Description:

Target: scaffold0562; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 115
Target Start/End: Complemental strand, 9979 - 9924
Alignment:
Q  60 accagggaccaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 115  Q
    |||||||||||||| |||||||||| |||||||||| || ||||| ||||||||||    
T  9979 accagggaccaaaatccaaactcgctatatttgcagggatcaaaagcatattttag 9924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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