View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15324_high_48 (Length: 245)

Name: NF15324_high_48
Description: NF15324
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15324_high_48
NF15324_high_48
[»] scaffold0012 (3 HSPs)
scaffold0012 (16-230)||(180086-180300)
scaffold0012 (45-151)||(150204-150309)
scaffold0012 (185-228)||(33564-33608)
[»] chr4 (30 HSPs)
chr4 (56-160)||(27716938-27717042)
chr4 (184-230)||(49072536-49072582)
chr4 (185-230)||(13589452-13589497)
chr4 (186-230)||(7185195-7185239)
chr4 (186-228)||(18277254-18277296)
chr4 (184-222)||(18493441-18493479)
chr4 (186-228)||(27961849-27961891)
chr4 (185-226)||(15012621-15012662)
chr4 (189-230)||(15212947-15212988)
chr4 (185-230)||(37956355-37956400)
chr4 (186-226)||(7964108-7964148)
chr4 (186-230)||(19560207-19560250)
chr4 (186-226)||(41255705-41255745)
chr4 (186-230)||(47467706-47467750)
chr4 (186-230)||(54362610-54362654)
chr4 (186-228)||(15045704-15045746)
chr4 (186-228)||(15108678-15108720)
chr4 (186-228)||(30231832-30231874)
chr4 (184-230)||(14902102-14902150)
chr4 (185-230)||(41916127-41916172)
chr4 (186-222)||(819261-819297)
chr4 (186-230)||(10375353-10375397)
chr4 (186-230)||(38765524-38765568)
chr4 (186-228)||(12244243-12244285)
chr4 (184-230)||(40904289-40904334)
chr4 (185-218)||(54399218-54399251)
chr4 (186-230)||(10236653-10236696)
chr4 (186-228)||(17145050-17145094)
chr4 (186-218)||(17867878-17867910)
chr4 (185-217)||(23269243-23269275)
[»] chr8 (39 HSPs)
chr8 (185-230)||(23351046-23351091)
chr8 (186-228)||(22745551-22745593)
chr8 (184-228)||(5855431-5855475)
chr8 (186-230)||(18040917-18040961)
chr8 (186-230)||(45464489-45464533)
chr8 (185-227)||(21258843-21258885)
chr8 (184-230)||(31590833-31590879)
chr8 (184-230)||(33610357-33610403)
chr8 (186-228)||(39446072-39446114)
chr8 (185-230)||(22314927-22314972)
chr8 (185-230)||(22723967-22724012)
chr8 (185-230)||(24240433-24240477)
chr8 (186-230)||(22496605-22496649)
chr8 (184-228)||(23157627-23157670)
chr8 (186-230)||(23223326-23223370)
chr8 (186-230)||(24551958-24552001)
chr8 (186-230)||(33529302-33529346)
chr8 (183-230)||(19330710-19330757)
chr8 (186-228)||(15934070-15934112)
chr8 (186-228)||(23159054-23159096)
chr8 (184-230)||(24968657-24968702)
chr8 (189-230)||(24908628-24908669)
chr8 (189-230)||(24910849-24910890)
chr8 (188-228)||(25297037-25297078)
chr8 (188-228)||(25759057-25759098)
chr8 (186-227)||(26696013-26696053)
chr8 (186-230)||(29307314-29307359)
chr8 (186-226)||(17503008-17503048)
chr8 (186-230)||(23218698-23218741)
chr8 (186-226)||(27232425-27232465)
chr8 (185-228)||(23151154-23151196)
chr8 (189-228)||(26012311-26012350)
chr8 (186-228)||(22735195-22735237)
chr8 (186-228)||(41506235-41506277)
chr8 (186-227)||(18260815-18260855)
chr8 (189-230)||(20175139-20175180)
chr8 (189-230)||(20219866-20219907)
chr8 (185-228)||(23150676-23150720)
chr8 (194-230)||(45558313-45558349)
[»] chr7 (31 HSPs)
chr7 (186-230)||(33560491-33560535)
chr7 (185-230)||(9723185-9723230)
chr7 (186-230)||(20582940-20582984)
chr7 (186-230)||(31502040-31502084)
chr7 (185-230)||(13352802-13352847)
chr7 (185-230)||(17923331-17923376)
chr7 (185-230)||(21675106-21675151)
chr7 (186-222)||(3050444-3050480)
chr7 (186-226)||(13275654-13275694)
chr7 (187-230)||(9251283-9251326)
chr7 (195-230)||(45150407-45150442)
chr7 (186-228)||(9612187-9612229)
chr7 (186-228)||(9839758-9839800)
chr7 (186-228)||(16914313-16914355)
chr7 (185-227)||(18078878-18078920)
chr7 (196-230)||(45146208-45146242)
chr7 (186-230)||(14268232-14268277)
chr7 (185-230)||(14935998-14936042)
chr7 (185-230)||(15363591-15363635)
chr7 (185-230)||(17927119-17927164)
chr7 (187-228)||(48357464-48357505)
chr7 (187-230)||(9318923-9318966)
chr7 (185-228)||(18150660-18150703)
chr7 (186-228)||(4485571-4485613)
chr7 (186-227)||(15977195-15977236)
chr7 (189-230)||(44304378-44304419)
chr7 (186-222)||(47480404-47480441)
chr7 (185-217)||(12193219-12193251)
chr7 (185-217)||(13378359-13378391)
chr7 (185-217)||(21537171-21537203)
chr7 (185-228)||(49047003-49047047)
[»] chr1 (16 HSPs)
chr1 (186-230)||(36355598-36355642)
chr1 (186-228)||(22828751-22828793)
chr1 (184-228)||(19603988-19604032)
chr1 (185-228)||(22142680-22142723)
chr1 (186-228)||(17609749-17609791)
chr1 (186-230)||(8537308-8537352)
chr1 (186-230)||(8602547-8602591)
chr1 (184-228)||(38033007-38033051)
chr1 (185-230)||(33398166-33398211)
chr1 (186-230)||(16646809-16646853)
chr1 (184-216)||(51626998-51627030)
chr1 (188-226)||(25094709-25094747)
chr1 (184-217)||(16246375-16246408)
chr1 (185-230)||(20839210-20839254)
chr1 (186-227)||(52401449-52401490)
chr1 (188-228)||(21195821-21195861)
[»] scaffold0123 (1 HSPs)
scaffold0123 (185-228)||(11772-11815)
[»] scaffold0006 (1 HSPs)
scaffold0006 (185-228)||(196636-196679)
[»] chr6 (27 HSPs)
chr6 (185-228)||(15079075-15079118)
chr6 (185-230)||(25655008-25655053)
chr6 (186-230)||(18506716-18506760)
chr6 (186-230)||(32352845-32352889)
chr6 (188-230)||(17082510-17082552)
chr6 (186-228)||(21265754-21265796)
chr6 (184-230)||(33537694-33537740)
chr6 (185-230)||(29157837-29157882)
chr6 (186-230)||(17547038-17547082)
chr6 (186-230)||(19171402-19171446)
chr6 (186-230)||(21932056-21932100)
chr6 (186-230)||(22582128-22582172)
chr6 (186-230)||(22584918-22584962)
chr6 (186-230)||(22589749-22589793)
chr6 (186-230)||(22848885-22848929)
chr6 (188-230)||(116438-116480)
chr6 (186-228)||(33325568-33325610)
chr6 (186-228)||(35135342-35135384)
chr6 (185-230)||(22461477-22461522)
chr6 (185-230)||(34967680-34967725)
chr6 (186-230)||(15889097-15889141)
chr6 (186-230)||(23223601-23223645)
chr6 (186-226)||(31466925-31466965)
chr6 (186-230)||(18628914-18628960)
chr6 (200-230)||(16887204-16887234)
chr6 (186-228)||(21624018-21624060)
chr6 (202-230)||(15004289-15004317)
[»] chr3 (34 HSPs)
chr3 (185-228)||(14081372-14081415)
chr3 (186-228)||(47784070-47784112)
chr3 (186-230)||(39657418-39657462)
chr3 (184-228)||(40940022-40940066)
chr3 (185-228)||(38810318-38810361)
chr3 (186-228)||(11060316-11060358)
chr3 (185-227)||(12487105-12487147)
chr3 (188-230)||(17586265-17586307)
chr3 (185-222)||(38168778-38168815)
chr3 (185-226)||(43426895-43426936)
chr3 (186-230)||(4161580-4161623)
chr3 (185-232)||(11328291-11328338)
chr3 (187-230)||(13300779-13300822)
chr3 (184-230)||(15521837-15521884)
chr3 (185-223)||(11403457-11403495)
chr3 (186-232)||(16881004-16881050)
chr3 (185-230)||(18970762-18970808)
chr3 (187-228)||(33368317-33368358)
chr3 (186-230)||(17758052-17758096)
chr3 (186-230)||(19059372-19059416)
chr3 (186-230)||(25103346-25103389)
chr3 (186-230)||(38375051-38375095)
chr3 (186-230)||(40038285-40038329)
chr3 (188-228)||(55193531-55193571)
chr3 (187-230)||(13311435-13311478)
chr3 (185-227)||(6713204-6713246)
chr3 (184-230)||(11639127-11639172)
chr3 (186-228)||(12032360-12032402)
chr3 (185-230)||(18747961-18748007)
chr3 (186-228)||(34560675-34560717)
chr3 (186-230)||(6224433-6224476)
chr3 (186-230)||(8605692-8605735)
chr3 (186-230)||(10913733-10913777)
chr3 (188-228)||(11881583-11881623)
[»] scaffold0342 (1 HSPs)
scaffold0342 (184-230)||(13163-13209)
[»] chr5 (20 HSPs)
chr5 (186-228)||(21110595-21110637)
chr5 (188-228)||(433329-433369)
chr5 (186-230)||(3420358-3420402)
chr5 (186-226)||(37984245-37984285)
chr5 (186-228)||(3674762-3674804)
chr5 (186-228)||(23467331-23467373)
chr5 (185-230)||(26559180-26559225)
chr5 (186-230)||(21215796-21215840)
chr5 (186-230)||(32965047-32965091)
chr5 (186-228)||(7729319-7729361)
chr5 (186-228)||(19349911-19349953)
chr5 (186-230)||(6457473-6457517)
chr5 (186-230)||(11966152-11966196)
chr5 (186-230)||(16596367-16596411)
chr5 (186-230)||(16834680-16834724)
chr5 (186-230)||(22886436-22886480)
chr5 (186-230)||(23418117-23418161)
chr5 (184-228)||(2032674-2032718)
chr5 (186-230)||(11762856-11762899)
chr5 (186-228)||(22662015-22662059)
[»] chr2 (15 HSPs)
chr2 (186-228)||(723264-723306)
chr2 (186-228)||(24885540-24885582)
chr2 (186-230)||(43646732-43646776)
chr2 (186-229)||(16292180-16292223)
chr2 (186-228)||(68869-68911)
chr2 (185-227)||(24293851-24293893)
chr2 (186-230)||(6095500-6095544)
chr2 (186-230)||(9638251-9638295)
chr2 (186-230)||(19660775-19660819)
chr2 (185-228)||(19433137-19433180)
chr2 (188-230)||(19667421-19667463)
chr2 (186-230)||(24086760-24086805)
chr2 (188-228)||(7322405-7322445)
chr2 (185-230)||(25595868-25595912)
chr2 (186-218)||(22579207-22579239)
[»] scaffold0193 (1 HSPs)
scaffold0193 (185-230)||(5418-5463)
[»] scaffold0151 (1 HSPs)
scaffold0151 (185-230)||(21721-21766)
[»] scaffold0022 (2 HSPs)
scaffold0022 (185-230)||(67343-67388)
scaffold0022 (186-230)||(132682-132725)
[»] scaffold0149 (1 HSPs)
scaffold0149 (186-230)||(32729-32773)
[»] scaffold0357 (1 HSPs)
scaffold0357 (185-228)||(7235-7278)
[»] scaffold0643 (1 HSPs)
scaffold0643 (186-228)||(384-426)
[»] scaffold0095 (1 HSPs)
scaffold0095 (186-228)||(33034-33076)
[»] scaffold0057 (1 HSPs)
scaffold0057 (184-230)||(6690-6736)
[»] scaffold0130 (1 HSPs)
scaffold0130 (185-230)||(26351-26396)
[»] scaffold0669 (1 HSPs)
scaffold0669 (186-226)||(2862-2902)
[»] scaffold0561 (1 HSPs)
scaffold0561 (186-230)||(2302-2346)
[»] scaffold0385 (1 HSPs)
scaffold0385 (186-230)||(11984-12027)
[»] scaffold0231 (1 HSPs)
scaffold0231 (186-230)||(12047-12091)
[»] scaffold0025 (1 HSPs)
scaffold0025 (184-228)||(86380-86424)
[»] scaffold0084 (1 HSPs)
scaffold0084 (186-229)||(3541-3584)
[»] scaffold0047 (1 HSPs)
scaffold0047 (183-222)||(19287-19326)
[»] scaffold0013 (1 HSPs)
scaffold0013 (192-227)||(6440-6475)
[»] scaffold1272 (1 HSPs)
scaffold1272 (186-228)||(1129-1171)
[»] scaffold0598 (1 HSPs)
scaffold0598 (186-228)||(4056-4098)
[»] scaffold0165 (1 HSPs)
scaffold0165 (188-230)||(30808-30850)
[»] scaffold0009 (1 HSPs)
scaffold0009 (186-228)||(70307-70349)
[»] scaffold0634 (1 HSPs)
scaffold0634 (185-230)||(6263-6308)
[»] scaffold0601 (1 HSPs)
scaffold0601 (186-227)||(233-274)
[»] scaffold0507 (1 HSPs)
scaffold0507 (185-230)||(901-946)
[»] scaffold0315 (1 HSPs)
scaffold0315 (186-227)||(11859-11900)
[»] scaffold0032 (1 HSPs)
scaffold0032 (186-227)||(115552-115593)
[»] scaffold0004 (2 HSPs)
scaffold0004 (185-230)||(87200-87245)
scaffold0004 (186-230)||(28317-28360)
[»] scaffold0389 (1 HSPs)
scaffold0389 (184-228)||(11350-11394)
[»] scaffold0090 (1 HSPs)
scaffold0090 (186-230)||(33811-33854)
[»] scaffold0026 (1 HSPs)
scaffold0026 (184-228)||(89196-89240)
[»] scaffold0447 (2 HSPs)
scaffold0447 (185-216)||(5461-5492)
scaffold0447 (185-216)||(10075-10106)
[»] scaffold0383 (1 HSPs)
scaffold0383 (185-216)||(8070-8101)
[»] scaffold0080 (1 HSPs)
scaffold0080 (185-228)||(23070-23112)
[»] scaffold1932 (1 HSPs)
scaffold1932 (186-228)||(733-775)
[»] scaffold0700 (1 HSPs)
scaffold0700 (186-228)||(3346-3388)
[»] scaffold0483 (1 HSPs)
scaffold0483 (186-228)||(7512-7554)
[»] scaffold0396 (1 HSPs)
scaffold0396 (186-228)||(11020-11062)
[»] scaffold0387 (1 HSPs)
scaffold0387 (185-230)||(312-358)
[»] scaffold0173 (1 HSPs)
scaffold0173 (185-222)||(6071-6109)
[»] scaffold0218 (1 HSPs)
scaffold0218 (186-227)||(27157-27198)
[»] scaffold0125 (1 HSPs)
scaffold0125 (186-222)||(43781-43818)
[»] scaffold0031 (1 HSPs)
scaffold0031 (185-218)||(96583-96616)
[»] scaffold0017 (1 HSPs)
scaffold0017 (197-230)||(13647-13680)
[»] scaffold0589 (1 HSPs)
scaffold0589 (185-228)||(8680-8724)
[»] scaffold0406 (1 HSPs)
scaffold0406 (186-230)||(14858-14902)
[»] scaffold0305 (1 HSPs)
scaffold0305 (185-217)||(10361-10393)
[»] scaffold0092 (1 HSPs)
scaffold0092 (186-218)||(4205-4237)
[»] scaffold0065 (1 HSPs)
scaffold0065 (186-230)||(67339-67383)
[»] scaffold0014 (1 HSPs)
scaffold0014 (186-226)||(160197-160237)


Alignment Details
Target: scaffold0012 (Bit Score: 171; Significance: 6e-92; HSPs: 3)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 16 - 230
Target Start/End: Original strand, 180086 - 180300
Alignment:
Q  16 accaaacaaataattatagttataacgggccacaaccccgcacacacgaagcatgtaaggtggaaatgcttaagccaatgttctgagtttattaagctat 115  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| |    
T  180086 accaaacaaataattatagttataacaggccacaacccctcacacacgaagcatgtaacgaggaaatgcttaagccaatgttctgagtttattaagcttt 180185  T
Q  116 atgacgtaacacaacctccaagcacgagacccatgagagcgaaatttattaatacttctatagtgaacattgtaacagcccgattttcgctagatttatt 215  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | ||||||||  ||||||||||||||||||||    
T  180186 atgacataacacaacctccaagcacgagacccatgagagcgaaacttattaatacttctatagtgaatactgtaacagttcgattttcgctagatttatt 180285  T
Q  216 tttaattgttttaat 230  Q
    |||||||||||||||    
T  180286 tttaattgttttaat 180300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 45 - 151
Target Start/End: Original strand, 150204 - 150309
Alignment:
Q  45 ccacaaccccgcacacacgaagcatgtaaggtggaaatgcttaagccaatgttctgagtttattaagctatatgacgtaacacaacctccaagcacgaga 144  Q
    |||||||||| ||| ||| || |||||||||  ||| ||||||| | ||||||| ||||||||| |||| |||||||| |||||||| ||||||||||||    
T  150204 ccacaacccc-cacgcacaaaccatgtaaggaagaactgcttaatcaaatgttcggagtttattgagctttatgacgtcacacaacccccaagcacgaga 150302  T
Q  145 cccatga 151  Q
    || ||||    
T  150303 cctatga 150309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 228
Target Start/End: Original strand, 33564 - 33608
Alignment:
Q  185 ttgtaacagcccgatttt-cgctagatttatttttaattgtttta 228  Q
    |||||||||||||||||| | ||||||||||||||||||||||||    
T  33564 ttgtaacagcccgatttttctctagatttatttttaattgtttta 33608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 4e-19; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 56 - 160
Target Start/End: Original strand, 27716938 - 27717042
Alignment:
Q  56 cacacacgaagcatgtaaggtggaaatgcttaagccaatgttctgagtttattaagctatatgacgtaacacaacctccaagcacgagacccatgagagc 155  Q
    |||||||||||||||||| | ||||||||||||||||||| ||||||  |||| || | |||||| |||||||||| | |||||||||||| |||| ||     
T  27716938 cacacacgaagcatgtaaagaggaaatgcttaagccaatgatctgagcctattgagatttatgacataacacaacccctaagcacgagacctatgaaagt 27717037  T
Q  156 gaaat 160  Q
    |||||    
T  27717038 gaaat 27717042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 184 - 230
Target Start/End: Complemental strand, 49072582 - 49072536
Alignment:
Q  184 attgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  49072582 attgtaacagcccgattttcgctagatttatttttaattgttttaat 49072536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 185 - 230
Target Start/End: Original strand, 13589452 - 13589497
Alignment:
Q  185 ttgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  13589452 ttgtaacagcccgattttcgctagaattatttttaattgttttaat 13589497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 7185195 - 7185239
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    |||||||||| ||||||||||||||||||||||||||||||||||    
T  7185195 tgtaacagcctgattttcgctagatttatttttaattgttttaat 7185239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 186 - 228
Target Start/End: Complemental strand, 18277296 - 18277254
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgtttta 228  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  18277296 tgtaacagcccgatttttgctagatttatttttaattgtttta 18277254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 184 - 222
Target Start/End: Original strand, 18493441 - 18493479
Alignment:
Q  184 attgtaacagcccgattttcgctagatttatttttaatt 222  Q
    |||||||||||||||||||||||||||||||||||||||    
T  18493441 attgtaacagcccgattttcgctagatttatttttaatt 18493479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 186 - 228
Target Start/End: Complemental strand, 27961891 - 27961849
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgtttta 228  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  27961891 tgtaacagcccgatttttgctagatttatttttaattgtttta 27961849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 226
Target Start/End: Original strand, 15012621 - 15012662
Alignment:
Q  185 ttgtaacagcccgattttcgctagatttatttttaattgttt 226  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  15012621 ttgtaacagcccgattttcgttagatttatttttaattgttt 15012662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 230
Target Start/End: Original strand, 15212947 - 15212988
Alignment:
Q  189 aacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  15212947 aacaacccgattttcgctagatttatttttaattgttttaat 15212988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 230
Target Start/End: Original strand, 37956355 - 37956400
Alignment:
Q  185 ttgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||    
T  37956355 ttgtaacagcccaatttttgctagatttatttttaattgttttaat 37956400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 226
Target Start/End: Original strand, 7964108 - 7964148
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttt 226  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  7964108 tgtaacagcccgattttcgttagatttatttttaattgttt 7964148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 19560250 - 19560207
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  19560250 tgtaacagcccgattttcgctaga-ttatttttaattgttttaat 19560207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 226
Target Start/End: Original strand, 41255705 - 41255745
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttt 226  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  41255705 tgtaacagcccgattttcgttagatttatttttaattgttt 41255745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 47467706 - 47467750
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||    
T  47467706 tgtaacaacccgattttcgctagaattatttttaattgttttaat 47467750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 54362610 - 54362654
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||    
T  54362610 tgtaacagcccaattttcgctagatttatttttaattattttaat 54362654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 186 - 228
Target Start/End: Complemental strand, 15045746 - 15045704
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgtttta 228  Q
    ||||||||||||||||||| ||||||||||||||||| |||||    
T  15045746 tgtaacagcccgattttcgatagatttatttttaattatttta 15045704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 186 - 228
Target Start/End: Original strand, 15108678 - 15108720
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgtttta 228  Q
    ||||||||||||||||||| ||||||||||||||||| |||||    
T  15108678 tgtaacagcccgattttcgatagatttatttttaattatttta 15108720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 186 - 228
Target Start/End: Original strand, 30231832 - 30231874
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgtttta 228  Q
    |||||||| ||||||||| ||||||||||||||||||||||||    
T  30231832 tgtaacagtccgattttcactagatttatttttaattgtttta 30231874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 184 - 230
Target Start/End: Complemental strand, 14902150 - 14902102
Alignment:
Q  184 attgtaacagcccgattttcgctagatttattt--ttaattgttttaat 230  Q
    ||||||||||| |||||||||||||||||||||  ||||||||||||||    
T  14902150 attgtaacagctcgattttcgctagatttattttattaattgttttaat 14902102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 185 - 230
Target Start/End: Original strand, 41916127 - 41916172
Alignment:
Q  185 ttgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    ||||||||| |||||||| |||||| ||||||||||||||||||||    
T  41916127 ttgtaacagtccgatttttgctagaattatttttaattgttttaat 41916172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 222
Target Start/End: Original strand, 819261 - 819297
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaatt 222  Q
    ||||||||||||||||| |||||||||||||||||||    
T  819261 tgtaacagcccgatttttgctagatttatttttaatt 819297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 10375397 - 10375353
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    ||||||| ||||||||||| |||| ||||||||||||||||||||    
T  10375397 tgtaacaacccgattttcgttagaattatttttaattgttttaat 10375353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 38765568 - 38765524
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    ||||||| || ||||||||||| ||||||||||||||||||||||    
T  38765568 tgtaacaacctgattttcgctacatttatttttaattgttttaat 38765524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 228
Target Start/End: Original strand, 12244243 - 12244285
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgtttta 228  Q
    ||||| ||||||||||||| ||||||||||||||||| |||||    
T  12244243 tgtaatagcccgattttcgttagatttatttttaattatttta 12244285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 230
Target Start/End: Original strand, 40904289 - 40904334
Alignment:
Q  184 attgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    ||||||||||||||||||||| |||| ||| ||||||||||||||||    
T  40904289 attgtaacagcccgattttcgatagaatta-ttttaattgttttaat 40904334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 185 - 218
Target Start/End: Complemental strand, 54399251 - 54399218
Alignment:
Q  185 ttgtaacagcccgattttcgctagatttattttt 218  Q
    ||||||||||||||||||||||||| ||||||||    
T  54399251 ttgtaacagcccgattttcgctagaattattttt 54399218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 10236653 - 10236696
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    ||||||||||| ||||||| |||||||| ||||||||||||||||    
T  10236653 tgtaacagccctattttcgttagattta-ttttaattgttttaat 10236696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 228
Target Start/End: Original strand, 17145050 - 17145094
Alignment:
Q  186 tgtaacagcccgatttt-cgctagattta-tttttaattgtttta 228  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||    
T  17145050 tgtaacagcccgatttttcgctagatttattttttaattgtttta 17145094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 218
Target Start/End: Complemental strand, 17867910 - 17867878
Alignment:
Q  186 tgtaacagcccgattttcgctagatttattttt 218  Q
    ||||||| |||||||||||||||||||||||||    
T  17867910 tgtaacaacccgattttcgctagatttattttt 17867878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 217
Target Start/End: Original strand, 23269243 - 23269275
Alignment:
Q  185 ttgtaacagcccgattttcgctagatttatttt 217  Q
    ||||||||||||||||||||||| |||||||||    
T  23269243 ttgtaacagcccgattttcgctatatttatttt 23269275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 2e-17; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 23351091 - 23351046
Alignment:
Q  185 ttgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  23351091 ttgtaacagcccgattttcgctagatttatttttaattgttttaat 23351046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 186 - 228
Target Start/End: Complemental strand, 22745593 - 22745551
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgtttta 228  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  22745593 tgtaacagcccgattttcgctagatttatttttaattgtttta 22745551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 184 - 228
Target Start/End: Complemental strand, 5855475 - 5855431
Alignment:
Q  184 attgtaacagcccgattttcgctagatttatttttaattgtttta 228  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  5855475 attgtaacagcccgatttttgctagatttatttttaattgtttta 5855431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 18040917 - 18040961
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  18040917 tgtaacagcccgattttcgctagaattatttttaattgttttaat 18040961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 45464489 - 45464533
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    ||||||||||| |||||||||||||||||||||||||||||||||    
T  45464489 tgtaacagcccaattttcgctagatttatttttaattgttttaat 45464533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 227
Target Start/End: Original strand, 21258843 - 21258885
Alignment:
Q  185 ttgtaacagcccgattttcgctagatttatttttaattgtttt 227  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  21258843 ttgtaacagcccgattttcgcaagatttatttttaattgtttt 21258885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 184 - 230
Target Start/End: Complemental strand, 31590879 - 31590833
Alignment:
Q  184 attgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||    
T  31590879 attgtaacagcctgattttcgctagaattatttttaattgttttaat 31590833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 184 - 230
Target Start/End: Original strand, 33610357 - 33610403
Alignment:
Q  184 attgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||    
T  33610357 attgtaacaactcgattttcgctagatttatttttaattgttttaat 33610403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 186 - 228
Target Start/End: Original strand, 39446072 - 39446114
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgtttta 228  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  39446072 tgtaacagcccaattttcgctagatttatttttaattgtttta 39446114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 22314972 - 22314927
Alignment:
Q  185 ttgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||    
T  22314972 ttgtaacagcccgatttttgctagatttaattttaattgttttaat 22314927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 22724012 - 22723967
Alignment:
Q  185 ttgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||    
T  22724012 ttgtaacagcccgattttcgctagacttatttttaattattttaat 22723967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 24240477 - 24240433
Alignment:
Q  185 ttgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  24240477 ttgtaacagcccgattttcgctagattta-ttttaattgttttaat 24240433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 22496605 - 22496649
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||    
T  22496605 tgtaacagtccgattttcgctagaattatttttaattgttttaat 22496649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 228
Target Start/End: Original strand, 23157627 - 23157670
Alignment:
Q  184 attgtaacagcccgattttcgctagatttatttttaattgtttta 228  Q
    |||||||||||||||||||||||||||||| ||||||||||||||    
T  23157627 attgtaacagcccgattttcgctagattta-ttttaattgtttta 23157670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 23223326 - 23223370
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||    
T  23223326 tgtaacaacccaattttcgctagatttatttttaattgttttaat 23223370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 24551958 - 24552001
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  24551958 tgtaacagcccgattttcgctaga-ttatttttaattgttttaat 24552001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 33529346 - 33529302
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    |||||||||||||||||||||| |||||||| |||||||||||||    
T  33529346 tgtaacagcccgattttcgctatatttatttataattgttttaat 33529302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 230
Target Start/End: Original strand, 19330710 - 19330757
Alignment:
Q  183 cattgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    |||||||||||||||||||||  |||||||| ||||||||||||||||    
T  19330710 cattgtaacagcccgattttctttagatttagttttaattgttttaat 19330757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 186 - 228
Target Start/End: Complemental strand, 15934112 - 15934070
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgtttta 228  Q
    ||||| ||||||||||||||||||||||||||||||| |||||    
T  15934112 tgtaatagcccgattttcgctagatttatttttaattatttta 15934070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 186 - 228
Target Start/End: Complemental strand, 23159096 - 23159054
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgtttta 228  Q
    ||||||| ||||||||||| |||||||||||||||||||||||    
T  23159096 tgtaacaacccgattttcgttagatttatttttaattgtttta 23159054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 230
Target Start/End: Original strand, 24968657 - 24968702
Alignment:
Q  184 attgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||    
T  24968657 attgtaacagctcgattttcgctagattta-ttttaattgttttaat 24968702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 230
Target Start/End: Complemental strand, 24908669 - 24908628
Alignment:
Q  189 aacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    |||||||||||||||| ||||||||||||||||| |||||||    
T  24908669 aacagcccgattttcgttagatttatttttaattattttaat 24908628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 230
Target Start/End: Complemental strand, 24910890 - 24910849
Alignment:
Q  189 aacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    |||||||||||||||| ||||||||||||||||| |||||||    
T  24910890 aacagcccgattttcgttagatttatttttaattattttaat 24910849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 228
Target Start/End: Complemental strand, 25297078 - 25297037
Alignment:
Q  188 taacagcccgattttcgctagatttat-ttttaattgtttta 228  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  25297078 taacagcccgattttcgctagatttattttttaattgtttta 25297037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 228
Target Start/End: Complemental strand, 25759098 - 25759057
Alignment:
Q  188 taacagcccgattttcgctagatttat-ttttaattgtttta 228  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  25759098 taacagcccgattttcgctagatttattttttaattgtttta 25759057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 227
Target Start/End: Original strand, 26696013 - 26696053
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgtttt 227  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  26696013 tgtaacagcccgattttcgctagattta-ttttaattgtttt 26696053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 29307359 - 29307314
Alignment:
Q  186 tgtaacagcccgattttcgctagatttat-ttttaattgttttaat 230  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||    
T  29307359 tgtaacagcccgattttcgttagatttattttttaattgttttaat 29307314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 226
Target Start/End: Complemental strand, 17503048 - 17503008
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttt 226  Q
    ||||||| ||| |||||||||||||||||||||||||||||    
T  17503048 tgtaacaacccaattttcgctagatttatttttaattgttt 17503008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 23218741 - 23218698
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||    
T  23218741 tgtaacaacccgattttcgctaga-ttatttttaattgttttaat 23218698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 226
Target Start/End: Original strand, 27232425 - 27232465
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttt 226  Q
    ||||||||||| |||||| ||||||||||||||||||||||    
T  27232425 tgtaacagcccaattttcactagatttatttttaattgttt 27232465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 228
Target Start/End: Original strand, 23151154 - 23151196
Alignment:
Q  185 ttgtaacagcccgattttcgctagatttatttttaattgtttta 228  Q
    |||||||| |||||||||||||||||||| ||||||||||||||    
T  23151154 ttgtaacaacccgattttcgctagattta-ttttaattgtttta 23151196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 228
Target Start/End: Complemental strand, 26012350 - 26012311
Alignment:
Q  189 aacagcccgattttcgctagatttatttttaattgtttta 228  Q
    ||||||| |||||||| |||||||||||||||||||||||    
T  26012350 aacagcctgattttcgttagatttatttttaattgtttta 26012311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 228
Target Start/End: Original strand, 22735195 - 22735237
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgtttta 228  Q
    ||||| ||| ||||||||| |||||||||||||||||||||||    
T  22735195 tgtaatagctcgattttcgttagatttatttttaattgtttta 22735237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 228
Target Start/End: Original strand, 41506235 - 41506277
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgtttta 228  Q
    ||||||||||||||||||| |||| |||||||||||| |||||    
T  41506235 tgtaacagcccgattttcgttagaattatttttaattatttta 41506277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 227
Target Start/End: Original strand, 18260815 - 18260855
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgtttt 227  Q
    ||||||||||||||||| |||||| |||||||||||||||||    
T  18260815 tgtaacagcccgatttttgctaga-ttatttttaattgtttt 18260855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 230
Target Start/End: Original strand, 20175139 - 20175180
Alignment:
Q  189 aacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    |||||| |||||||||||||||||| ||| ||||||||||||    
T  20175139 aacagctcgattttcgctagatttaatttcaattgttttaat 20175180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 230
Target Start/End: Original strand, 20219866 - 20219907
Alignment:
Q  189 aacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    |||||| |||||||||||||||||| ||| ||||||||||||    
T  20219866 aacagctcgattttcgctagatttaatttcaattgttttaat 20219907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 228
Target Start/End: Complemental strand, 23150720 - 23150676
Alignment:
Q  185 ttgtaacagcccgattttcgctagatttat-ttttaattgtttta 228  Q
    |||||||||||||||||| | ||||||||| ||||||||||||||    
T  23150720 ttgtaacagcccgattttggttagatttattttttaattgtttta 23150676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 230
Target Start/End: Original strand, 45558313 - 45558349
Alignment:
Q  194 cccgattttcgctagatttatttttaattgttttaat 230  Q
    |||||||||||||| | ||||||||||||||||||||    
T  45558313 cccgattttcgctataattatttttaattgttttaat 45558349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 9e-17; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 33560535 - 33560491
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  33560535 tgtaacagcccgattttcgctagatttatttttaattgttttaat 33560491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 185 - 230
Target Start/End: Original strand, 9723185 - 9723230
Alignment:
Q  185 ttgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  9723185 ttgtaacagcccgattttcgctagaattatttttaattgttttaat 9723230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 20582940 - 20582984
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    |||||||||||||| ||||||||||||||||||||||||||||||    
T  20582940 tgtaacagcccgatattcgctagatttatttttaattgttttaat 20582984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 31502084 - 31502040
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    ||||||| |||||||||||||||||||||||||||||||||||||    
T  31502084 tgtaacaacccgattttcgctagatttatttttaattgttttaat 31502040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 13352847 - 13352802
Alignment:
Q  185 ttgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||    
T  13352847 ttgtaacatcccgatttttgctagatttatttttaattgttttaat 13352802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 17923376 - 17923331
Alignment:
Q  185 ttgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    |||||| |||||||||||||||||||||| ||||||||||||||||    
T  17923376 ttgtaatagcccgattttcgctagatttaattttaattgttttaat 17923331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 230
Target Start/End: Original strand, 21675106 - 21675151
Alignment:
Q  185 ttgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||    
T  21675106 ttgtaacagcccaattttcgctagaattatttttaattgttttaat 21675151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 222
Target Start/End: Complemental strand, 3050480 - 3050444
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaatt 222  Q
    |||||||||||||||||||||||||||||||||||||    
T  3050480 tgtaacagcccgattttcgctagatttatttttaatt 3050444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 226
Target Start/End: Complemental strand, 13275694 - 13275654
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttt 226  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  13275694 tgtaacagctcgattttcgctagatttatttttaattgttt 13275654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 187 - 230
Target Start/End: Complemental strand, 9251326 - 9251283
Alignment:
Q  187 gtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    |||| |||||||||||||||||| ||||||||||||||||||||    
T  9251326 gtaatagcccgattttcgctagaattatttttaattgttttaat 9251283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 195 - 230
Target Start/End: Complemental strand, 45150442 - 45150407
Alignment:
Q  195 ccgattttcgctagatttatttttaattgttttaat 230  Q
    ||||||||||||||||||||||||||||||||||||    
T  45150442 ccgattttcgctagatttatttttaattgttttaat 45150407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 186 - 228
Target Start/End: Complemental strand, 9612229 - 9612187
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgtttta 228  Q
    ||||||||||||||||||| |||||||||||||||||| ||||    
T  9612229 tgtaacagcccgattttcgttagatttatttttaattgcttta 9612187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 186 - 228
Target Start/End: Complemental strand, 9839800 - 9839758
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgtttta 228  Q
    ||||||||||||||||||| |||||||||||||||||| ||||    
T  9839800 tgtaacagcccgattttcgttagatttatttttaattgcttta 9839758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 186 - 228
Target Start/End: Original strand, 16914313 - 16914355
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgtttta 228  Q
    |||||||  ||||||||||||||||||||||||||||||||||    
T  16914313 tgtaacaaaccgattttcgctagatttatttttaattgtttta 16914355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 185 - 227
Target Start/End: Original strand, 18078878 - 18078920
Alignment:
Q  185 ttgtaacagcccgattttcgctagatttatttttaattgtttt 227  Q
    |||||||||| |||||||||||||| |||||||||||||||||    
T  18078878 ttgtaacagctcgattttcgctagaattatttttaattgtttt 18078920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 196 - 230
Target Start/End: Complemental strand, 45146242 - 45146208
Alignment:
Q  196 cgattttcgctagatttatttttaattgttttaat 230  Q
    |||||||||||||||||||||||||||||||||||    
T  45146242 cgattttcgctagatttatttttaattgttttaat 45146208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 14268232 - 14268277
Alignment:
Q  186 tgtaacagcccgattttcgctagattta-tttttaattgttttaat 230  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||    
T  14268232 tgtaacagcccgattttcgttagatttattttttaattgttttaat 14268277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 14936042 - 14935998
Alignment:
Q  185 ttgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    |||||| |||||||||||||||||||||| ||||||||||||||||    
T  14936042 ttgtaatagcccgattttcgctagattta-ttttaattgttttaat 14935998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 15363635 - 15363591
Alignment:
Q  185 ttgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    |||||| |||||||||||||||||||||| ||||||||||||||||    
T  15363635 ttgtaatagcccgattttcgctagattta-ttttaattgttttaat 15363591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 17927164 - 17927119
Alignment:
Q  185 ttgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    |||||||||||||||||| | |||||||| ||||||||||||||||    
T  17927164 ttgtaacagcccgatttttgttagatttaattttaattgttttaat 17927119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 48357505 - 48357464
Alignment:
Q  187 gtaacagcccgattttcgctagatttatttttaattgtttta 228  Q
    ||||||||||| ||||||||||||||||||||||| ||||||    
T  48357505 gtaacagcccggttttcgctagatttatttttaatcgtttta 48357464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 9318923 - 9318966
Alignment:
Q  187 gtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    |||| ||||||||||| |||||| ||||||||||||||||||||    
T  9318923 gtaaaagcccgattttagctagaattatttttaattgttttaat 9318966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 228
Target Start/End: Original strand, 18150660 - 18150703
Alignment:
Q  185 ttgtaacagcccgattttcgctagatttatttttaattgtttta 228  Q
    |||||||| ||||||||||||||| |||| ||||||||||||||    
T  18150660 ttgtaacaacccgattttcgctagttttaattttaattgtttta 18150703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 228
Target Start/End: Complemental strand, 4485613 - 4485571
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgtttta 228  Q
    ||||||| ||||||||||||||||||| |||| ||||||||||    
T  4485613 tgtaacaacccgattttcgctagatttgttttaaattgtttta 4485571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 227
Target Start/End: Original strand, 15977195 - 15977236
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgtttt 227  Q
    |||||||||| ||||||| ||||||||| |||||||||||||    
T  15977195 tgtaacagcctgattttcactagatttaattttaattgtttt 15977236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 230
Target Start/End: Original strand, 44304378 - 44304419
Alignment:
Q  189 aacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    |||||| |||||||||||||||||| ||| ||||||||||||    
T  44304378 aacagctcgattttcgctagatttaatttcaattgttttaat 44304419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 222
Target Start/End: Original strand, 47480404 - 47480441
Alignment:
Q  186 tgtaacagcccgatttt-cgctagatttatttttaatt 222  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  47480404 tgtaacagcccgatttttcgctagatttatttttaatt 47480441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 217
Target Start/End: Complemental strand, 12193251 - 12193219
Alignment:
Q  185 ttgtaacagcccgattttcgctagatttatttt 217  Q
    |||||||||||||||||||| ||||||||||||    
T  12193251 ttgtaacagcccgattttcgttagatttatttt 12193219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 217
Target Start/End: Complemental strand, 13378391 - 13378359
Alignment:
Q  185 ttgtaacagcccgattttcgctagatttatttt 217  Q
    |||||||||||||||||||| ||||||||||||    
T  13378391 ttgtaacagcccgattttcgttagatttatttt 13378359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 217
Target Start/End: Original strand, 21537171 - 21537203
Alignment:
Q  185 ttgtaacagcccgattttcgctagatttatttt 217  Q
    |||||||||| ||||||||||||||||||||||    
T  21537171 ttgtaacagctcgattttcgctagatttatttt 21537203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 228
Target Start/End: Original strand, 49047003 - 49047047
Alignment:
Q  185 ttgtaacagcccgattttcgctagattta-tttttaattgtttta 228  Q
    |||||||||||| ||||| |||||||||| |||||||||||||||    
T  49047003 ttgtaacagcccaatttttgctagatttattttttaattgtttta 49047047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 9e-17; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 36355598 - 36355642
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  36355598 tgtaacagcccgattttcgctagatttatttttaattgttttaat 36355642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 186 - 228
Target Start/End: Original strand, 22828751 - 22828793
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgtttta 228  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  22828751 tgtaacagcccgattttcgctagatttatttttaattgtttta 22828793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 184 - 228
Target Start/End: Complemental strand, 19604032 - 19603988
Alignment:
Q  184 attgtaacagcccgattttcgctagatttatttttaattgtttta 228  Q
    |||||||||| ||||||||||||||||||||||||||||||||||    
T  19604032 attgtaacagtccgattttcgctagatttatttttaattgtttta 19603988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 185 - 228
Target Start/End: Original strand, 22142680 - 22142723
Alignment:
Q  185 ttgtaacagcccgattttcgctagatttatttttaattgtttta 228  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  22142680 ttgtaacagcccgattttcgttagatttatttttaattgtttta 22142723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 186 - 228
Target Start/End: Complemental strand, 17609791 - 17609749
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgtttta 228  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  17609791 tgtaacagcccgattttcgcgagatttatttttaattgtttta 17609749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 8537308 - 8537352
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    |||||||||| |||||||| |||||||||||||||||||||||||    
T  8537308 tgtaacagcctgattttcgttagatttatttttaattgttttaat 8537352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 8602547 - 8602591
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    |||||||||| |||||||| |||||||||||||||||||||||||    
T  8602547 tgtaacagcctgattttcgttagatttatttttaattgttttaat 8602591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 228
Target Start/End: Original strand, 38033007 - 38033051
Alignment:
Q  184 attgtaacagcccgattttcgctagatttatttttaattgtttta 228  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||    
T  38033007 attgtaacagtccgattttcgctaaatttatttttaattgtttta 38033051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 33398211 - 33398166
Alignment:
Q  185 ttgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    |||||||| |||||||||||||||| ||||| ||||||||||||||    
T  33398211 ttgtaacatcccgattttcgctagaattattcttaattgttttaat 33398166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 16646853 - 16646809
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    |||||||| ||||||||| |||||||||||||||||| |||||||    
T  16646853 tgtaacagtccgattttccctagatttatttttaattattttaat 16646809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 216
Target Start/End: Original strand, 51626998 - 51627030
Alignment:
Q  184 attgtaacagcccgattttcgctagatttattt 216  Q
    |||||||||||||||||||||||||||||||||    
T  51626998 attgtaacagcccgattttcgctagatttattt 51627030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 226
Target Start/End: Complemental strand, 25094747 - 25094709
Alignment:
Q  188 taacagcccgattttcgctagatttatttttaattgttt 226  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  25094747 taacagcccgattttcgctataattatttttaattgttt 25094709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 217
Target Start/End: Complemental strand, 16246408 - 16246375
Alignment:
Q  184 attgtaacagcccgattttcgctagatttatttt 217  Q
    ||||||||| ||||||||||||||||||||||||    
T  16246408 attgtaacaacccgattttcgctagatttatttt 16246375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 20839254 - 20839210
Alignment:
Q  185 ttgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    ||||||||||||||||||||||||| ||| |||||||| |||||||    
T  20839254 ttgtaacagcccgattttcgctagaatta-ttttaattattttaat 20839210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 227
Target Start/End: Complemental strand, 52401490 - 52401449
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgtttt 227  Q
    |||||||| | |||||||| ||||||||||||||||||||||    
T  52401490 tgtaacagtctgattttcgttagatttatttttaattgtttt 52401449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 228
Target Start/End: Complemental strand, 21195861 - 21195821
Alignment:
Q  188 taacagcccgattttcgctagatttatttttaattgtttta 228  Q
    ||||| |||||| |||| |||||||||||||||||||||||    
T  21195861 taacatcccgatattcgttagatttatttttaattgtttta 21195821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 185 - 228
Target Start/End: Complemental strand, 11815 - 11772
Alignment:
Q  185 ttgtaacagcccgattttcgctagatttatttttaattgtttta 228  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  11815 ttgtaacagcccgattttcgctagatttatttttaattgtttta 11772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 185 - 228
Target Start/End: Original strand, 196636 - 196679
Alignment:
Q  185 ttgtaacagcccgattttcgctagatttatttttaattgtttta 228  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  196636 ttgtaacagcccgattttcgctagatttatttttaattgtttta 196679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 4e-16; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 185 - 228
Target Start/End: Original strand, 15079075 - 15079118
Alignment:
Q  185 ttgtaacagcccgattttcgctagatttatttttaattgtttta 228  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  15079075 ttgtaacagcccgattttcgctagatttatttttaattgtttta 15079118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 25655053 - 25655008
Alignment:
Q  185 ttgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  25655053 ttgtaacagcccgatttttgctagatttatttttaattgttttaat 25655008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 18506716 - 18506760
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    ||||||| |||||||||||||||||||||||||||||||||||||    
T  18506716 tgtaacaacccgattttcgctagatttatttttaattgttttaat 18506760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 32352889 - 32352845
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    |||||||||||||||||||||| ||||||||||||||||||||||    
T  32352889 tgtaacagcccgattttcgctatatttatttttaattgttttaat 32352845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 188 - 230
Target Start/End: Original strand, 17082510 - 17082552
Alignment:
Q  188 taacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  17082510 taacatcccgattttcgctagatttatttttaattgttttaat 17082552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 186 - 228
Target Start/End: Complemental strand, 21265796 - 21265754
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgtttta 228  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  21265796 tgtaacagcccgattttcgctagagttatttttaattgtttta 21265754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 184 - 230
Target Start/End: Original strand, 33537694 - 33537740
Alignment:
Q  184 attgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||    
T  33537694 attgtaacagttcgattttcgctagatttatttttaattgttttaat 33537740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 230
Target Start/End: Original strand, 29157837 - 29157882
Alignment:
Q  185 ttgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||    
T  29157837 ttgttacagcccgattttcgctagaattatttttaattgttttaat 29157882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 17547038 - 17547082
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||    
T  17547038 tgtaagagcccaattttcgctagatttatttttaattgttttaat 17547082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 19171446 - 19171402
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||    
T  19171446 tgtaacaacccaattttcgctagatttatttttaattgttttaat 19171402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 21932100 - 21932056
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||    
T  21932100 tgtaatagcccgatttttgctagatttatttttaattgttttaat 21932056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 22582128 - 22582172
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    |||||||||||||||||||||||||||||| |||||| |||||||    
T  22582128 tgtaacagcccgattttcgctagatttattcttaattcttttaat 22582172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 22584918 - 22584962
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    |||||||||||||||||||||||||||||| |||||| |||||||    
T  22584918 tgtaacagcccgattttcgctagatttattcttaattcttttaat 22584962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 22589749 - 22589793
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    |||||||||||||||||||||||||||||| |||||| |||||||    
T  22589749 tgtaacagcccgattttcgctagatttattcttaattcttttaat 22589793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 22848929 - 22848885
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||    
T  22848929 tgtaacagccccattttcgttagatttatttttaattgttttaat 22848885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 188 - 230
Target Start/End: Original strand, 116438 - 116480
Alignment:
Q  188 taacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    ||||||| |||||||||||||| ||||||||||||||||||||    
T  116438 taacagctcgattttcgctagaattatttttaattgttttaat 116480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 186 - 228
Target Start/End: Complemental strand, 33325610 - 33325568
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgtttta 228  Q
    ||||||| |||||||||||||||||||||||||| ||||||||    
T  33325610 tgtaacaacccgattttcgctagatttatttttatttgtttta 33325568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 186 - 228
Target Start/End: Original strand, 35135342 - 35135384
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgtttta 228  Q
    ||||||||||||||||||| |||||||||||||| ||||||||    
T  35135342 tgtaacagcccgattttcgttagatttatttttatttgtttta 35135384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 185 - 230
Target Start/End: Original strand, 22461477 - 22461522
Alignment:
Q  185 ttgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    |||||||| |||||||||||||||| ||||||||||| ||||||||    
T  22461477 ttgtaacaacccgattttcgctagaattatttttaatcgttttaat 22461522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 34967725 - 34967680
Alignment:
Q  185 ttgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    ||||||||| ||||||||||||||| ||||||| ||||||||||||    
T  34967725 ttgtaacaggccgattttcgctagaattattttcaattgttttaat 34967680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 15889097 - 15889141
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    ||||||| ||||||||||| |||| ||||||||||||||||||||    
T  15889097 tgtaacaacccgattttcgttagaattatttttaattgttttaat 15889141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 23223645 - 23223601
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    ||||||||||| ||||||| |||| ||||||||||||||||||||    
T  23223645 tgtaacagcccaattttcgttagaattatttttaattgttttaat 23223601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 226
Target Start/End: Original strand, 31466925 - 31466965
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttt 226  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  31466925 tgtaacagtccgattttcgttagatttatttttaattgttt 31466965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 18628914 - 18628960
Alignment:
Q  186 tgtaacagcccgattttcgctagattta--tttttaattgttttaat 230  Q
    ||||||||||| ||||||||||||||||  |||||||||||||||||    
T  18628914 tgtaacagcccaattttcgctagatttatttttttaattgttttaat 18628960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 230
Target Start/End: Original strand, 16887204 - 16887234
Alignment:
Q  200 tttcgctagatttatttttaattgttttaat 230  Q
    |||||||||||||||||||||||||||||||    
T  16887204 tttcgctagatttatttttaattgttttaat 16887234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 228
Target Start/End: Complemental strand, 21624060 - 21624018
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgtttta 228  Q
    ||||||||||||||||||| ||||||| ||||||||| |||||    
T  21624060 tgtaacagcccgattttcgttagatttgtttttaattatttta 21624018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 230
Target Start/End: Original strand, 15004289 - 15004317
Alignment:
Q  202 tcgctagatttatttttaattgttttaat 230  Q
    |||||||||||||||||||||||||||||    
T  15004289 tcgctagatttatttttaattgttttaat 15004317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 4e-16; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 185 - 228
Target Start/End: Complemental strand, 14081415 - 14081372
Alignment:
Q  185 ttgtaacagcccgattttcgctagatttatttttaattgtttta 228  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  14081415 ttgtaacagcccgattttcgctagatttatttttaattgtttta 14081372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 186 - 228
Target Start/End: Original strand, 47784070 - 47784112
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgtttta 228  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  47784070 tgtaacagcccgattttcgctagatttatttttaattgtttta 47784112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 39657462 - 39657418
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    ||||||| |||||||||||||||||||||||||||||||||||||    
T  39657462 tgtaacaacccgattttcgctagatttatttttaattgttttaat 39657418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 184 - 228
Target Start/End: Complemental strand, 40940066 - 40940022
Alignment:
Q  184 attgtaacagcccgattttcgctagatttatttttaattgtttta 228  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  40940066 attgtaacagcccgattttcactagatttatttttaattgtttta 40940022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 185 - 228
Target Start/End: Original strand, 38810318 - 38810361
Alignment:
Q  185 ttgtaacagcccgattttcgctagatttatttttaattgtttta 228  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  38810318 ttgtaacagcccgattttcgttagatttatttttaattgtttta 38810361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 186 - 228
Target Start/End: Original strand, 11060316 - 11060358
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgtttta 228  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  11060316 tgtaacagcccgattttcactagatttatttttaattgtttta 11060358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 227
Target Start/End: Original strand, 12487105 - 12487147
Alignment:
Q  185 ttgtaacagcccgattttcgctagatttatttttaattgtttt 227  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  12487105 ttgtaacagcccgatttttgctagatttatttttaattgtttt 12487147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 188 - 230
Target Start/End: Original strand, 17586265 - 17586307
Alignment:
Q  188 taacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  17586265 taacagcccgattttcgctagaattatttttaattgttttaat 17586307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 38168815 - 38168778
Alignment:
Q  185 ttgtaacagcccgattttcgctagatttatttttaatt 222  Q
    ||||||||||||||||||||||||||||||||||||||    
T  38168815 ttgtaacagcccgattttcgctagatttatttttaatt 38168778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 226
Target Start/End: Original strand, 43426895 - 43426936
Alignment:
Q  185 ttgtaacagcccgattttcgctagatttatttttaattgttt 226  Q
    ||||||||||||||||||||||||| ||||||||||||||||    
T  43426895 ttgtaacagcccgattttcgctagaattatttttaattgttt 43426936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 4161580 - 4161623
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  4161580 tgtaacagcccgattttcgctagattta-ttttaattgttttaat 4161623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 232
Target Start/End: Original strand, 11328291 - 11328338
Alignment:
Q  185 ttgtaacagcccgattttcgctagatttatttttaattgttttaattg 232  Q
    |||||||| ||||||||||||||||||||||||||||| |||| ||||    
T  11328291 ttgtaacaacccgattttcgctagatttatttttaattatttttattg 11328338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 13300779 - 13300822
Alignment:
Q  187 gtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    ||||||||| |||||| |||||||||||||||||||||||||||    
T  13300779 gtaacagcctgatttttgctagatttatttttaattgttttaat 13300822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 230
Target Start/End: Complemental strand, 15521884 - 15521837
Alignment:
Q  184 attgtaacagcccgattttcgctagatttat-ttttaattgttttaat 230  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||    
T  15521884 attgtaacagcctgattttcgctagatttattttttaattgttttaat 15521837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 185 - 223
Target Start/End: Complemental strand, 11403495 - 11403457
Alignment:
Q  185 ttgtaacagcccgattttcgctagatttatttttaattg 223  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  11403495 ttgtaacagcccgattttcgctagattaatttttaattg 11403457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 16881050 - 16881004
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttttaattg 232  Q
    ||||||||||||||||||| ||||||||||||||||| |||| ||||    
T  16881050 tgtaacagcccgattttcgttagatttatttttaattatttttattg 16881004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 18970808 - 18970762
Alignment:
Q  185 ttgtaacagcccgattttcgctagatttat-ttttaattgttttaat 230  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||    
T  18970808 ttgtaactgcccgattttcgctagatttattttttaattgttttaat 18970762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 187 - 228
Target Start/End: Original strand, 33368317 - 33368358
Alignment:
Q  187 gtaacagcccgattttcgctagatttatttttaattgtttta 228  Q
    |||||| ||||||||||| |||||||||||||||||||||||    
T  33368317 gtaacaacccgattttcgttagatttatttttaattgtttta 33368358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 17758052 - 17758096
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    ||||| ||||||||||| |||||| ||||||||||||||||||||    
T  17758052 tgtaatagcccgatttttgctagaattatttttaattgttttaat 17758096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 19059372 - 19059416
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    ||||| ||||||||||| |||||| ||||||||||||||||||||    
T  19059372 tgtaatagcccgatttttgctagaattatttttaattgttttaat 19059416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 25103346 - 25103389
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||    
T  25103346 tgtaacagtccgattttcgctagattta-ttttaattgttttaat 25103389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 38375051 - 38375095
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    |||||||||  ||||||||||||| ||||||||||||||||||||    
T  38375051 tgtaacagcttgattttcgctagaattatttttaattgttttaat 38375095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 40038285 - 40038329
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    |||||||||||||||||||||| ||||| |||| |||||||||||    
T  40038285 tgtaacagcccgattttcgctaaatttaattttgattgttttaat 40038329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 228
Target Start/End: Complemental strand, 55193571 - 55193531
Alignment:
Q  188 taacagcccgattttcgctagatttatttttaattgtttta 228  Q
    |||||||||||||||||| ||||||||||||||| ||||||    
T  55193571 taacagcccgattttcgcaagatttatttttaatcgtttta 55193531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 13311435 - 13311478
Alignment:
Q  187 gtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    |||||||||  ||||| |||||||||||||||||||||||||||    
T  13311435 gtaacagcctaatttttgctagatttatttttaattgttttaat 13311478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 227
Target Start/End: Original strand, 6713204 - 6713246
Alignment:
Q  185 ttgtaacagcccgattttcgctagatttatttttaattgtttt 227  Q
    |||||||| |||||||| ||||| |||||||||||||||||||    
T  6713204 ttgtaacaacccgatttccgctaaatttatttttaattgtttt 6713246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 230
Target Start/End: Complemental strand, 11639172 - 11639127
Alignment:
Q  184 attgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    |||||||||||||||||||||||||| ||| ||| ||||||||||||    
T  11639172 attgtaacagcccgattttcgctagaatta-tttaaattgttttaat 11639127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 228
Target Start/End: Complemental strand, 12032402 - 12032360
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgtttta 228  Q
    ||||||||||||||||||| |||| |||||||||||| |||||    
T  12032402 tgtaacagcccgattttcgttagaattatttttaattatttta 12032360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 18748007 - 18747961
Alignment:
Q  185 ttgtaacagcccgattttcgctagatttat-ttttaattgttttaat 230  Q
    |||||| ||||||||||||| ||||||||| ||||||||||||||||    
T  18748007 ttgtaatagcccgattttcgttagatttattttttaattgttttaat 18747961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 228
Target Start/End: Complemental strand, 34560717 - 34560675
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgtttta 228  Q
    ||||||| ||||||||| | |||||||||||||||||||||||    
T  34560717 tgtaacaacccgatttttgttagatttatttttaattgtttta 34560675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 6224433 - 6224476
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    |||||||||| ||||||| ||||||||| ||||||||||||||||    
T  6224433 tgtaacagcctgattttcactagattta-ttttaattgttttaat 6224476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 8605735 - 8605692
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    ||||||| || ||||||||||||||||| ||||||||||||||||    
T  8605735 tgtaacaacctgattttcgctagattta-ttttaattgttttaat 8605692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 10913777 - 10913733
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    |||||||||||||||||  ||| | ||||||||||||||||||||    
T  10913777 tgtaacagcccgattttgactataattatttttaattgttttaat 10913733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 228
Target Start/End: Original strand, 11881583 - 11881623
Alignment:
Q  188 taacagcccgattttcgctagatttatttttaattgtttta 228  Q
    ||||||||||||||||| |||||||||||||| || |||||    
T  11881583 taacagcccgattttcgttagatttatttttacttatttta 11881623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 184 - 230
Target Start/End: Complemental strand, 13209 - 13163
Alignment:
Q  184 attgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||    
T  13209 attgtaacagcccgattttcgctagatttatttctaattgttttaat 13163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 186 - 228
Target Start/End: Complemental strand, 21110637 - 21110595
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgtttta 228  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  21110637 tgtaacagcccgattttcgctagatttatttttaattgtttta 21110595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 188 - 228
Target Start/End: Complemental strand, 433369 - 433329
Alignment:
Q  188 taacagcccgattttcgctagatttatttttaattgtttta 228  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  433369 taacagcccgattttcgctagatttatttttaattgtttta 433329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 3420358 - 3420402
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    |||||||||||||||||| ||||||||||||||||||||||||||    
T  3420358 tgtaacagcccgattttcactagatttatttttaattgttttaat 3420402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 186 - 226
Target Start/End: Complemental strand, 37984285 - 37984245
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttt 226  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  37984285 tgtaacagcccgattttcgctagatttatttttaattgttt 37984245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 186 - 228
Target Start/End: Complemental strand, 3674804 - 3674762
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgtttta 228  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  3674804 tgtaacagtccgattttcgctagatttatttttaattgtttta 3674762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 186 - 228
Target Start/End: Complemental strand, 23467373 - 23467331
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgtttta 228  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  23467373 tgtaacagcccgattttcgttagatttatttttaattgtttta 23467331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 230
Target Start/End: Original strand, 26559180 - 26559225
Alignment:
Q  185 ttgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||    
T  26559180 ttgtaacagtctgattttcgctagatttatttttaattgttttaat 26559225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 21215796 - 21215840
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    ||||||||||| | |||||||||||||||||||||||||||||||    
T  21215796 tgtaacagcccaaatttcgctagatttatttttaattgttttaat 21215840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 32965047 - 32965091
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    ||||||||||||||||| | |||||||||||||||||||||||||    
T  32965047 tgtaacagcccgatttttgttagatttatttttaattgttttaat 32965091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 186 - 228
Target Start/End: Complemental strand, 7729361 - 7729319
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgtttta 228  Q
    ||||||||||| ||||||||||||||||||||||||| |||||    
T  7729361 tgtaacagcccaattttcgctagatttatttttaattatttta 7729319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 186 - 228
Target Start/End: Complemental strand, 19349953 - 19349911
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgtttta 228  Q
    ||||||||| |||||||||||||||||||||| ||||||||||    
T  19349953 tgtaacagctcgattttcgctagatttattttgaattgtttta 19349911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 6457517 - 6457473
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    ||||||| ||||||||||| |||| ||||||||||||||||||||    
T  6457517 tgtaacaacccgattttcgttagaattatttttaattgttttaat 6457473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 11966196 - 11966152
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    |||||||| ||||||||| ||||| ||||||||||||||||||||    
T  11966196 tgtaacagtccgattttcactagaattatttttaattgttttaat 11966152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 16596411 - 16596367
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    |||||||| |||||||| ||||||||||||||||| |||||||||    
T  16596411 tgtaacagtccgatttttgctagatttatttttaactgttttaat 16596367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 16834680 - 16834724
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    |||||||||| |||||||||||||  |||||||||||||||||||    
T  16834680 tgtaacagcctgattttcgctagaaatatttttaattgttttaat 16834724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 22886480 - 22886436
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    ||||||||||| ||||||| |||||||||||||||| ||||||||    
T  22886480 tgtaacagcccaattttcgttagatttatttttaatggttttaat 22886436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 23418161 - 23418117
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    ||||||||||||||||| |||| | ||||||||||||||||||||    
T  23418161 tgtaacagcccgatttttgctaaaattatttttaattgttttaat 23418117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 228
Target Start/End: Complemental strand, 2032718 - 2032674
Alignment:
Q  184 attgtaacagcccgattttcgctagatttatttttaattgtttta 228  Q
    ||||||||||||||||||| | |||| |||||||||||| |||||    
T  2032718 attgtaacagcccgatttttgttagaattatttttaattatttta 2032674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 11762856 - 11762899
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    |||||||| || |||||||||||||||| ||||||||||||||||    
T  11762856 tgtaacagtccaattttcgctagattta-ttttaattgttttaat 11762899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 228
Target Start/End: Original strand, 22662015 - 22662059
Alignment:
Q  186 tgtaacagcccgatttt-cgctagattta-tttttaattgtttta 228  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||    
T  22662015 tgtaacagcccgatttttcgctagatttattttttaattgtttta 22662059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 186 - 228
Target Start/End: Complemental strand, 723306 - 723264
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgtttta 228  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  723306 tgtaacagcccgattttcgctagatttatttttaattgtttta 723264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 186 - 228
Target Start/End: Complemental strand, 24885582 - 24885540
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgtttta 228  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  24885582 tgtaacagcccgattttcgctagatttatttttaattgtttta 24885540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 43646776 - 43646732
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  43646776 tgtaatagcccgattttcgctagatttatttttaattgttttaat 43646732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 186 - 229
Target Start/End: Original strand, 16292180 - 16292223
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttttaa 229  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  16292180 tgtaacagcccgattttcgctagatttattttcaattgttttaa 16292223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 186 - 228
Target Start/End: Complemental strand, 68911 - 68869
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgtttta 228  Q
    ||||||| |||||||||||||||||||||||||||||||||||    
T  68911 tgtaacaacccgattttcgctagatttatttttaattgtttta 68869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 227
Target Start/End: Original strand, 24293851 - 24293893
Alignment:
Q  185 ttgtaacagcccgattttcgctagatttatttttaattgtttt 227  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  24293851 ttgtaacagcccgattttcgttagatttatttttaattgtttt 24293893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 6095544 - 6095500
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||    
T  6095544 tgtaacagcccgattttcgctagaattattttaaattgttttaat 6095500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 9638295 - 9638251
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    |||||||||||||||||||||| | ||||||||||||||||||||    
T  9638295 tgtaacagcccgattttcgctaaaattatttttaattgttttaat 9638251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 19660819 - 19660775
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    ||||||| || ||||||||||||||||||||||||||||||||||    
T  19660819 tgtaacaacctgattttcgctagatttatttttaattgttttaat 19660775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 228
Target Start/End: Original strand, 19433137 - 19433180
Alignment:
Q  185 ttgtaacagcccgattttcgctagatttatttttaattgtttta 228  Q
    |||||||||  |||||||||||||||||||||||||||||||||    
T  19433137 ttgtaacagttcgattttcgctagatttatttttaattgtttta 19433180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 188 - 230
Target Start/End: Complemental strand, 19667463 - 19667421
Alignment:
Q  188 taacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    ||||| |||||||||||||||||||||||||| ||||||||||    
T  19667463 taacaacccgattttcgctagatttatttttacttgttttaat 19667421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 24086760 - 24086805
Alignment:
Q  186 tgtaacagcccgattttcgctagattta-tttttaattgttttaat 230  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||    
T  24086760 tgtaacagcccgattttcgctagatttattttttaattattttaat 24086805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 228
Target Start/End: Complemental strand, 7322445 - 7322405
Alignment:
Q  188 taacagcccgattttcgctagatttatttttaattgtttta 228  Q
    ||||||| |||||||||||||||||| ||||||||||||||    
T  7322445 taacagctcgattttcgctagatttaattttaattgtttta 7322405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 25595912 - 25595868
Alignment:
Q  185 ttgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    |||||||||||| |||||||||||| ||| ||||||||||||||||    
T  25595912 ttgtaacagcccaattttcgctagaatta-ttttaattgttttaat 25595868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 218
Target Start/End: Original strand, 22579207 - 22579239
Alignment:
Q  186 tgtaacagcccgattttcgctagatttattttt 218  Q
    ||||||||||| |||||||||||||||||||||    
T  22579207 tgtaacagccctattttcgctagatttattttt 22579239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 5463 - 5418
Alignment:
Q  185 ttgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  5463 ttgtaacagcccgattttcgttagatttatttttaattgttttaat 5418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 185 - 230
Target Start/End: Original strand, 21721 - 21766
Alignment:
Q  185 ttgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  21721 ttgtaacagcccgatttttgctagatttatttttaattgttttaat 21766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 185 - 230
Target Start/End: Original strand, 67343 - 67388
Alignment:
Q  185 ttgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||    
T  67343 ttgtaacagtccgattttcgctagatttatttttaattgttttaat 67388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 132725 - 132682
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    ||||||||||||||||| |||||| ||| ||||||||||||||||    
T  132725 tgtaacagcccgatttttgctagaatta-ttttaattgttttaat 132682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 32729 - 32773
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    |||||||| ||||||||||||||||||||||||||||||||||||    
T  32729 tgtaacagtccgattttcgctagatttatttttaattgttttaat 32773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 185 - 228
Target Start/End: Complemental strand, 7278 - 7235
Alignment:
Q  185 ttgtaacagcccgattttcgctagatttatttttaattgtttta 228  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  7278 ttgtaacagcccgattttcgctagagttatttttaattgtttta 7235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0643 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0643
Description:

Target: scaffold0643; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 186 - 228
Target Start/End: Complemental strand, 426 - 384
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgtttta 228  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  426 tgtaacagcccgatttttgctagatttatttttaattgtttta 384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 186 - 228
Target Start/End: Original strand, 33034 - 33076
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgtttta 228  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  33034 tgtaacagcccaattttcgctagatttatttttaattgtttta 33076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 184 - 230
Target Start/End: Complemental strand, 6736 - 6690
Alignment:
Q  184 attgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||    
T  6736 attgtaacaacccgattttcgatagatttatttttaattgttttaat 6690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 230
Target Start/End: Original strand, 26351 - 26396
Alignment:
Q  185 ttgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||    
T  26351 ttgtaacagcccgattctcgttagatttatttttaattgttttaat 26396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0669 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0669
Description:

Target: scaffold0669; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 226
Target Start/End: Original strand, 2862 - 2902
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttt 226  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  2862 tgtaatagcccgattttcgctagatttatttttaattgttt 2902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0561 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 2302 - 2346
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  2302 tgtaacagcccaattttcgctagaattatttttaattgttttaat 2346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 11984 - 12027
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  11984 tgtaacagcccgattttcgctaga-ttatttttaattgttttaat 12027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 12047 - 12091
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||    
T  12047 tgtaacatcccgattttcgttagatttatttttaattgttttaat 12091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 228
Target Start/End: Complemental strand, 86424 - 86380
Alignment:
Q  184 attgtaacagcccgattttcgctagatttatttttaattgtttta 228  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||    
T  86424 attgtaacagcccaattttcgttagatttatttttaattgtttta 86380  T

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Target: scaffold0084 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 229
Target Start/End: Complemental strand, 3584 - 3541
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttttaa 229  Q
    ||||||||||||||||| |||||||||| |||||||||||||||    
T  3584 tgtaacagcccgatttttgctagatttaattttaattgttttaa 3541  T

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Target: scaffold0047 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 222
Target Start/End: Original strand, 19287 - 19326
Alignment:
Q  183 cattgtaacagcccgattttcgctagatttatttttaatt 222  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  19287 cattgtaacagtccgattttcgctagatttatttttaatt 19326  T

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Target: scaffold0013 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 227
Target Start/End: Original strand, 6440 - 6475
Alignment:
Q  192 agcccgattttcgctagatttatttttaattgtttt 227  Q
    ||||||||||||||||||||||||||||||||||||    
T  6440 agcccgattttcgctagatttatttttaattgtttt 6475  T

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Target: scaffold1272 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold1272
Description:

Target: scaffold1272; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 186 - 228
Target Start/End: Complemental strand, 1171 - 1129
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgtttta 228  Q
    ||||||||||||||||||| ||||||||||||||||| |||||    
T  1171 tgtaacagcccgattttcgttagatttatttttaattatttta 1129  T

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Target: scaffold0598 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 186 - 228
Target Start/End: Complemental strand, 4098 - 4056
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgtttta 228  Q
    ||||||||||||||||||| ||||||||||||||||| |||||    
T  4098 tgtaacagcccgattttcgttagatttatttttaattatttta 4056  T

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Target: scaffold0165 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 188 - 230
Target Start/End: Complemental strand, 30850 - 30808
Alignment:
Q  188 taacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    ||||||||||||||| |||||||| ||||||||||||||||||    
T  30850 taacagcccgatttttgctagattaatttttaattgttttaat 30808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 186 - 228
Target Start/End: Complemental strand, 70349 - 70307
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgtttta 228  Q
    |||||||||||||||||||||| |||||||||||||| |||||    
T  70349 tgtaacagcccgattttcgctatatttatttttaattatttta 70307  T

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Target: scaffold0634 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 6308 - 6263
Alignment:
Q  185 ttgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    |||||||||||||||| | | |||||||||||||||||||||||||    
T  6308 ttgtaacagcccgattcttgttagatttatttttaattgttttaat 6263  T

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Target: scaffold0601 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 227
Target Start/End: Original strand, 233 - 274
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgtttt 227  Q
    |||||||||||||||||||||||| ||||| |||||||||||    
T  233 tgtaacagcccgattttcgctagaattattattaattgtttt 274  T

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Target: scaffold0507 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 185 - 230
Target Start/End: Original strand, 901 - 946
Alignment:
Q  185 ttgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    |||||||||||||||||||| |||| |||||||||||| |||||||    
T  901 ttgtaacagcccgattttcgttagaattatttttaattattttaat 946  T

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Target: scaffold0315 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 227
Target Start/End: Original strand, 11859 - 11900
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgtttt 227  Q
    ||||||| ||||||||||| ||||||||||||||||||||||    
T  11859 tgtaacaacccgattttcgttagatttatttttaattgtttt 11900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 227
Target Start/End: Original strand, 115552 - 115593
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgtttt 227  Q
    |||||||||||||||||| ||||||||| |||||||||||||    
T  115552 tgtaacagcccgattttcactagatttaattttaattgtttt 115593  T

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Target: scaffold0004 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 87245 - 87200
Alignment:
Q  185 ttgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    |||||||  |||||||||||||||| ||||||||||||||||||||    
T  87245 ttgtaacttcccgattttcgctagaattatttttaattgttttaat 87200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 28360 - 28317
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    |||||||||||||||||| ||||| ||| ||||||||||||||||    
T  28360 tgtaacagcccgattttcactagaatta-ttttaattgttttaat 28317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 228
Target Start/End: Complemental strand, 11394 - 11350
Alignment:
Q  184 attgtaacagcccgattttcgctagatttatttttaattgtttta 228  Q
    ||||||||||||||||||||| |||| |||||||||||| |||||    
T  11394 attgtaacagcccgattttcgttagaattatttttaattatttta 11350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 33811 - 33854
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||    
T  33811 tgtaacagcccgatttttgctagattta-ttttaattgttttaat 33854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 228
Target Start/End: Original strand, 89196 - 89240
Alignment:
Q  184 attgtaacagcccgattttcgctagatttatttttaattgtttta 228  Q
    |||||||||  | ||||||||||||||||||||||||||||||||    
T  89196 attgtaacaatcagattttcgctagatttatttttaattgtttta 89240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 216
Target Start/End: Complemental strand, 5492 - 5461
Alignment:
Q  185 ttgtaacagcccgattttcgctagatttattt 216  Q
    ||||||||||||||||||||||||||||||||    
T  5492 ttgtaacagcccgattttcgctagatttattt 5461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 216
Target Start/End: Complemental strand, 10106 - 10075
Alignment:
Q  185 ttgtaacagcccgattttcgctagatttattt 216  Q
    ||||||||||||||||||||||||||||||||    
T  10106 ttgtaacagcccgattttcgctagatttattt 10075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 216
Target Start/End: Complemental strand, 8101 - 8070
Alignment:
Q  185 ttgtaacagcccgattttcgctagatttattt 216  Q
    ||||||||||||||||||||||||||||||||    
T  8101 ttgtaacagcccgattttcgctagatttattt 8070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 228
Target Start/End: Original strand, 23070 - 23112
Alignment:
Q  185 ttgtaacagcccgattttcgctagatttatttttaattgtttta 228  Q
    |||||||||||||||||||| |||||||| ||||||||||||||    
T  23070 ttgtaacagcccgattttcgttagattta-ttttaattgtttta 23112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1932 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1932
Description:

Target: scaffold1932; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 228
Target Start/End: Original strand, 733 - 775
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgtttta 228  Q
    ||||||||||||||||||| || | ||||||||||||||||||    
T  733 tgtaacagcccgattttcgttaaaattatttttaattgtttta 775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0700 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0700
Description:

Target: scaffold0700; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 228
Target Start/End: Complemental strand, 3388 - 3346
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgtttta 228  Q
    ||||||||||||||||||| ||||| |||||||||||| ||||    
T  3388 tgtaacagcccgattttcgttagatctatttttaattggttta 3346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 228
Target Start/End: Complemental strand, 7554 - 7512
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgtttta 228  Q
    ||||||||||| ||||||| ||||||||||||||||| |||||    
T  7554 tgtaacagcccaattttcgttagatttatttttaattatttta 7512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 228
Target Start/End: Original strand, 11020 - 11062
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgtttta 228  Q
    ||||||||||| |||||||||||||||| ||||| ||||||||    
T  11020 tgtaacagccctattttcgctagatttacttttagttgtttta 11062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 230
Target Start/End: Original strand, 312 - 358
Alignment:
Q  185 ttgtaacagcccgattttcgctagattta-tttttaattgttttaat 230  Q
    ||||||||||| |||||||| |||||||| |||||||||||||||||    
T  312 ttgtaacagcctgattttcgttagatttattttttaattgttttaat 358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 6109 - 6071
Alignment:
Q  185 ttgtaacagcccgatttt-cgctagatttatttttaatt 222  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  6109 ttgtaacagcccgatttttcgctagatttatttttaatt 6071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 227
Target Start/End: Complemental strand, 27198 - 27157
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgtttt 227  Q
    ||||| ||||| |||||||||||||||| |||||||||||||    
T  27198 tgtaatagcccaattttcgctagatttaattttaattgtttt 27157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 222
Target Start/End: Complemental strand, 43818 - 43781
Alignment:
Q  186 tgtaacagcccgatttt-cgctagatttatttttaatt 222  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  43818 tgtaacagcccgatttttcgctagatttatttttaatt 43781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 185 - 218
Target Start/End: Original strand, 96583 - 96616
Alignment:
Q  185 ttgtaacagcccgattttcgctagatttattttt 218  Q
    |||||||||||||||||||| |||||||||||||    
T  96583 ttgtaacagcccgattttcgatagatttattttt 96616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 197 - 230
Target Start/End: Complemental strand, 13680 - 13647
Alignment:
Q  197 gattttcgctagatttatttttaattgttttaat 230  Q
    |||||| |||||||||||||||||||||||||||    
T  13680 gatttttgctagatttatttttaattgttttaat 13647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 228
Target Start/End: Complemental strand, 8724 - 8680
Alignment:
Q  185 ttgtaacagcccgattttcgctagatttat-ttttaattgtttta 228  Q
    |||| ||| ||||||||||||||||||||| ||||||||||||||    
T  8724 ttgttacaacccgattttcgctagatttattttttaattgtttta 8680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0406 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 14902 - 14858
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    |||||||| | ||||||||||||| || |||||||||||||||||    
T  14902 tgtaacagtctgattttcgctagaattttttttaattgttttaat 14858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 217
Target Start/End: Complemental strand, 10393 - 10361
Alignment:
Q  185 ttgtaacagcccgattttcgctagatttatttt 217  Q
    |||||||||| ||||||||||||||||||||||    
T  10393 ttgtaacagctcgattttcgctagatttatttt 10361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 218
Target Start/End: Complemental strand, 4237 - 4205
Alignment:
Q  186 tgtaacagcccgattttcgctagatttattttt 218  Q
    ||||||||||||||||||| |||||||||||||    
T  4237 tgtaacagcccgattttcgttagatttattttt 4205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 67339 - 67383
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttttaat 230  Q
    ||||||| |||||||||||||||| ||||||||| ||||| ||||    
T  67339 tgtaacaacccgattttcgctagaattatttttatttgttataat 67383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 226
Target Start/End: Complemental strand, 160237 - 160197
Alignment:
Q  186 tgtaacagcccgattttcgctagatttatttttaattgttt 226  Q
    ||||| ||||||||||| |||| ||||||||||||||||||    
T  160237 tgtaatagcccgatttttgctaaatttatttttaattgttt 160197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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