View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15324_high_6 (Length: 569)

Name: NF15324_high_6
Description: NF15324
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15324_high_6
NF15324_high_6
[»] chr3 (13 HSPs)
chr3 (142-562)||(1022076-1022493)
chr3 (175-562)||(1007081-1007465)
chr3 (179-558)||(1013587-1013966)
chr3 (179-558)||(997197-997576)
chr3 (18-147)||(1003932-1004058)
chr3 (18-147)||(1021929-1022055)
chr3 (179-302)||(989023-989146)
chr3 (53-84)||(968171-968202)
chr3 (257-319)||(1931450-1931512)
chr3 (257-319)||(1937276-1937338)
chr3 (277-318)||(1891349-1891390)
chr3 (123-152)||(13497790-13497819)
chr3 (123-151)||(1941042-1941070)
[»] chr4 (3 HSPs)
chr4 (282-540)||(22672196-22672442)
chr4 (123-151)||(20020256-20020284)
chr4 (179-227)||(22672518-22672566)
[»] chr5 (9 HSPs)
chr5 (123-155)||(20292561-20292593)
chr5 (123-155)||(20301009-20301041)
chr5 (123-155)||(20305422-20305454)
chr5 (123-155)||(20309826-20309858)
chr5 (116-149)||(23691510-23691543)
chr5 (118-151)||(23754502-23754535)
chr5 (118-151)||(23774536-23774569)
chr5 (118-151)||(23819957-23819990)
chr5 (118-151)||(23861489-23861522)
[»] chr8 (1 HSPs)
chr8 (117-151)||(31144865-31144899)


Alignment Details
Target: chr3 (Bit Score: 295; Significance: 1e-165; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 295; E-Value: 1e-165
Query Start/End: Original strand, 142 - 562
Target Start/End: Original strand, 1022076 - 1022493
Alignment:
Q  142 aaaattcaagagagcgactacctctaagggaatttatgatgtatggcttcggatatgatgttgttagcgataattacaaggttgtgtctgttttaagtgt 241  Q
    ||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||     
T  1022076 aaaattcaagagaccgactacctctaaggggaattatgatgtatggcttcggatatgatgttgttaacgataattacaaggttgtgtctgttttacgtgc 1022175  T
Q  242 atgtgaatgtatcagtggtaattttgttaagaaagatgaagtgaaggttcatactttgggtgccaattcatggaaaagaatttcaatgttaccttttgct 341  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  1022176 atgtgaatgtatcagtggtaattttgttaagaaagatgaagtgaaggttcatactttgggtgccaattcatggaaaagaattccaatgttcccttttgct 1022275  T
Q  342 gttgtccctattcagaaatctgggcaatgtgtgagcggaacgattaattggttggtttctaaagataccaagaaaagtcaatgttttatcctttctttag 441  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||  ||||||||||||||||||| |||||| |||    
T  1022276 gttgtccctattcagaaatctggccaatgtgtgagcggcacgattaattggctggtttctaaagatactgagaaaagtcaatgttttattctttctctag 1022375  T
Q  442 atatgaagaacgattcttaccaaaaggttttgttgcccaatgatattggtaaggttgatgcttgtacttttcacttgagtgttcttagggattgtttgac 541  Q
    |||||| ||| |||||||||||||||||||| |||||||||||   ||||||||| ||||  ||| |||| |||||||||||| |||||||||| |||||    
T  1022376 atatgaggaaagattcttaccaaaaggtttttttgcccaatga---tggtaaggtagatggatgttctttgcacttgagtgtttttagggattgcttgac 1022472  T
Q  542 tatgctttgtggtgatgatgt 562  Q
      || ||||||||||||||||    
T  1022473 cgtgttttgtggtgatgatgt 1022493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 175 - 562
Target Start/End: Original strand, 1007081 - 1007465
Alignment:
Q  175 ttatgatgtatggcttcggatatgatgttgttagcgataattacaaggttgtgtctgttttaagtgtatgtgaatgtatcagtggtaattttgttaagaa 274  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  1007081 ttatgatgtatggcttcggatatgatgttgttaacgataattacaaggttgtgtctgttttacgtgcatgtgaatgtatcagtggtaattttgttaagaa 1007180  T
Q  275 agatgaagtgaaggttcatactttgggtgccaattcatggaaaagaatttcaatgttaccttttgctgttgtccctattcagaaatctgggcaatgtgtg 374  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  1007181 agatgaagtgaaggttcatactttgggtgccaattcatggaaaagaattccaatgttcccttttgctgttgtccctattcagaaatctggccaatgtgtg 1007280  T
Q  375 agcggaacgattaattggttggtttctaaagataccaagaaaagtcaatgttttatcctttctttagatatgaagaacgattcttaccaaaaggttttgt 474  Q
    ||||| |||||||||||| ||||||||||||||||  ||||||||||||||||||| |||||| ||||||||| ||| |||||||||||||||||||| |    
T  1007281 agcggcacgattaattggctggtttctaaagatactgagaaaagtcaatgttttattctttctctagatatgaggaaagattcttaccaaaaggtttttt 1007380  T
Q  475 tgcccaatgatattggtaaggttgatgcttgtacttttcacttgagtgttcttagggattgtttgactatgctttgtggtgatgatgt 562  Q
    ||||||||||   ||||||||| ||||  ||| |||| |||||||||||| |||||||||| |||||  || ||||||||||||||||    
T  1007381 tgcccaatga---tggtaaggtagatggatgttctttgcacttgagtgtttttagggattgcttgaccgtgttttgtggtgatgatgt 1007465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 179 - 558
Target Start/End: Original strand, 1013587 - 1013966
Alignment:
Q  179 gatgtatggcttcggatatgatgttgttagcgataattacaaggttgtgtctgttttaagtgtatgtgaatgtatcagtggtaattttgttaagaaagat 278  Q
    |||||||||||||||||||||   |||||| |||||||||||||||||| |||||||| |||| | ||| |  |  |||  || ||| ||||| || |||    
T  1013587 gatgtatggcttcggatatgaccctgttagtgataattacaaggttgtgactgttttacgtgtgtttgattacagtagtcatattttagttaaaaatgat 1013686  T
Q  279 gaagtgaaggttcatactttgggtgccaattcatggaaaagaatttcaatgttaccttttgctgttgtccctattcagaa---atctgggcaatgtgtga 375  Q
    ||||| |||||| |||||||||||  ||||||||||||||| |||||| |||| |||| | ||||| ||||  |||||     ||||||| |||||||||    
T  1013687 gaagttaaggtttatactttgggtatcaattcatggaaaagcatttcagtgttcccttattctgttttccccgttcagcggctatctgggaaatgtgtga 1013786  T
Q  376 gcggaacgattaattggttggtttctaaagataccaagaaaagtcaatgttttatcctttctttagatatgaagaacgattcttaccaaaaggttttgtt 475  Q
    | || |||||||||||||||| ||| |||||| | ||| ||||| ||| |||||| |||||| | ||| ||| |||||| ||||||||| |||||| |||    
T  1013787 gtggcacgattaattggttggcttcaaaagattctaagcaaagtaaatattttattctttctcttgatttgatgaacgagtcttaccaagaggtttcgtt 1013886  T
Q  476 gcccaatgatattggtaaggttgatgcttgtacttttcacttgagtgttcttagggattgtttgactatgctttgtggtgatg 558  Q
    ||||||| |   ||||||||| ||||| |||| |||||||||||||||||| |||||||| ||||  ||| ||| ||||||||    
T  1013887 gcccaatta---tggtaaggtagatgcatgtaattttcacttgagtgttctcagggattgcttgatcatgttttctggtgatg 1013966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 179 - 558
Target Start/End: Original strand, 997197 - 997576
Alignment:
Q  179 gatgtatggcttcggatatgatgttgttagcgataattacaaggttgtgtctgttttaagtgtatgtgaatgtatcagtggtaattttgttaagaaagat 278  Q
    |||||||||||||||||||||   |||||| |||||||||||||||||| |||||||| |||| | ||| |  |  |||  || ||| ||||| |  |||    
T  997197 gatgtatggcttcggatatgaccctgttagtgataattacaaggttgtgactgttttacgtgtgtttgattacagtagtcatattttagttaaaagtgat 997296  T
Q  279 gaagtgaaggttcatactttgggtgccaattcatggaaaagaatttcaatgttaccttttgctgttgtccctattcagaa---atctgggcaatgtgtga 375  Q
    ||||| |||||| |||||||||||  ||||||||||||||| |||||| |||| |||| | ||||| ||||  ||||| |   ||||||| |||||||||    
T  997297 gaagttaaggtttatactttgggtatcaattcatggaaaagcatttcagtgttcccttattctgttttccccgttcagcagctatctgggaaatgtgtga 997396  T
Q  376 gcggaacgattaattggttggtttctaaagataccaagaaaagtcaatgttttatcctttctttagatatgaagaacgattcttaccaaaaggttttgtt 475  Q
    | || |||||||||||| ||| ||| |||||| | ||| ||||| ||| |||||| |||||| | ||| ||| |||||| ||||||||| |||||| |||    
T  997397 gtggcacgattaattggctggcttcaaaagattctaagcaaagtaaatattttattctttctcttgatttgatgaacgagtcttaccaagaggtttcgtt 997496  T
Q  476 gcccaatgatattggtaaggttgatgcttgtacttttcacttgagtgttcttagggattgtttgactatgctttgtggtgatg 558  Q
    ||||||| |   ||||||||| ||||| |||| |||||||||||||||||| |||||||| ||||  ||| ||| ||||||||    
T  997497 gcccaatta---tggtaaggtagatgcatgtaattttcacttgagtgttctcagggattgcttgatcatgttttctggtgatg 997576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 18 - 147
Target Start/End: Original strand, 1003932 - 1004058
Alignment:
Q  18 aactcaagcattctctttgctattctgtttctttagttggctcatgcaatggcatcctatgtcttgctgtatatcatgtaggatcagctttgattcagtt 117  Q
    |||||||||||||||||||| ||   ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  1003932 aactcaagcattctctttgcaat---gtttccttagttggctcatgcaatggcatcctatgtcttgctgtatattatgtaggatcagctttgattcagtt 1004028  T
Q  118 tcgactgtggaacccttccattagaaaatt 147  Q
    ||||||||||||||||||||||||||||||    
T  1004029 tcgactgtggaacccttccattagaaaatt 1004058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 18 - 147
Target Start/End: Original strand, 1021929 - 1022055
Alignment:
Q  18 aactcaagcattctctttgctattctgtttctttagttggctcatgcaatggcatcctatgtcttgctgtatatcatgtaggatcagctttgattcagtt 117  Q
    |||||||||||||||||||| ||   ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  1021929 aactcaagcattctctttgcaat---gtttccttagttggctcatgcaatggcatcctatgtcttgctgtatattatgtaggatcagctttgattcagtt 1022025  T
Q  118 tcgactgtggaacccttccattagaaaatt 147  Q
    ||||||||||||||||||||||||||||||    
T  1022026 tcgactgtggaacccttccattagaaaatt 1022055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 179 - 302
Target Start/End: Original strand, 989023 - 989146
Alignment:
Q  179 gatgtatggcttcggatatgatgttgttagcgataattacaaggttgt-gtctgttttaagtgtatgtgaatgtatcagtggtaattttgttaagaaaga 277  Q
    ||||||||||||||||||||||  |||| | ||||||||||||||||| |||| ||||| || ||  ||| | ||  | | ||||||||||| | ||| |    
T  989023 gatgtatggcttcggatatgatcctgttggtgataattacaaggttgtagtct-ttttacgtttaattgattctaatattagtaattttgttgacaaata 989121  T
Q  278 tgaagtgaaggttcatactttgggt 302  Q
    | |||||||||||||||||||||||    
T  989122 taaagtgaaggttcatactttgggt 989146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 84
Target Start/End: Original strand, 968171 - 968202
Alignment:
Q  53 gttggctcatgcaatggcatcctatgtcttgc 84  Q
    ||||||||||||||||||||||||||||||||    
T  968171 gttggctcatgcaatggcatcctatgtcttgc 968202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 257 - 319
Target Start/End: Complemental strand, 1931512 - 1931450
Alignment:
Q  257 tggtaattttgttaagaaagatgaagtgaaggttcatactttgggtgccaattcatggaaaag 319  Q
    ||||||||||||| | ||  ||||||||||||||||||||||||   ||||||| ||||||||    
T  1931512 tggtaattttgttgacaaccatgaagtgaaggttcatactttggacaccaattcttggaaaag 1931450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 257 - 319
Target Start/End: Complemental strand, 1937338 - 1937276
Alignment:
Q  257 tggtaattttgttaagaaagatgaagtgaaggttcatactttgggtgccaattcatggaaaag 319  Q
    ||||||||||||| | ||  |||||||||||||||||||||||||  ||||||  ||||||||    
T  1937338 tggtaattttgttgacaaccatgaagtgaaggttcatactttgggcaccaattgttggaaaag 1937276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 318
Target Start/End: Complemental strand, 1891390 - 1891349
Alignment:
Q  277 atgaagtgaaggttcatactttgggtgccaattcatggaaaa 318  Q
    |||||||||||||||||||||||||  ||||||| |||||||    
T  1891390 atgaagtgaaggttcatactttgggcaccaattcttggaaaa 1891349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 152
Target Start/End: Original strand, 13497790 - 13497819
Alignment:
Q  123 tgtggaacccttccattagaaaattcaaga 152  Q
    ||||||||||||||||||||||||||||||    
T  13497790 tgtggaacccttccattagaaaattcaaga 13497819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 151
Target Start/End: Complemental strand, 1941070 - 1941042
Alignment:
Q  123 tgtggaacccttccattagaaaattcaag 151  Q
    |||||||||||||||||||||||||||||    
T  1941070 tgtggaacccttccattagaaaattcaag 1941042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 4e-21; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 282 - 540
Target Start/End: Complemental strand, 22672442 - 22672196
Alignment:
Q  282 gtgaaggttcatactttgggtgccaattcatggaaaagaatttcaatgttaccttttgctgttgtccctattcagaaatctgggcaatgtgtgagcggaa 381  Q
    ||||||||| ||| ||||||| |||||||||||||||| ||| ||||||| |||| || || |   || ||| || ||||||||||||||||||| || |    
T  22672442 gtgaaggtttataatttgggtaccaattcatggaaaagcattccaatgttcccttatgttgcttcacccattgagcaatctgggcaatgtgtgagtggca 22672343  T
Q  382 cgattaattggttggtttctaaagataccaagaaaagtcaatgttttatcctttctttagatatgaagaacgattcttaccaaaaggttttgttgcccaa 481  Q
    ||||||||||||||| ||||         ||||||||||||||||||||  ||||| | ||| ||  ||| || |||||| || || |||||||||||||    
T  22672342 cgattaattggttggcttct---------aagaaaagtcaatgttttattatttctcttgatttggggaatgagtcttacaaagagattttgttgcccaa 22672252  T
Q  482 tgatattggtaaggttgatgcttgtacttttcacttgagtgttcttagggattgtttga 540  Q
    | |   |||  |||| |||||| ||| ||| | |||||||||||| |||||||| ||||    
T  22672251 tta---tggagaggtagatgctcgtattttgctcttgagtgttctcagggattgcttga 22672196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 151
Target Start/End: Complemental strand, 20020284 - 20020256
Alignment:
Q  123 tgtggaacccttccattagaaaattcaag 151  Q
    |||||||||||||||||||||||||||||    
T  20020284 tgtggaacccttccattagaaaattcaag 20020256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 22672566 - 22672518
Alignment:
Q  179 gatgtatggcttcggatatgatgttgttagcgataattacaaggttgtg 227  Q
    ||||||| |||||||||||||   |||||| ||||||||||||||||||    
T  22672566 gatgtattgcttcggatatgaccctgttagtgataattacaaggttgtg 22672518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 33; Significance: 0.000000003; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 123 - 155
Target Start/End: Original strand, 20292561 - 20292593
Alignment:
Q  123 tgtggaacccttccattagaaaattcaagagag 155  Q
    |||||||||||||||||||||||||||||||||    
T  20292561 tgtggaacccttccattagaaaattcaagagag 20292593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 123 - 155
Target Start/End: Original strand, 20301009 - 20301041
Alignment:
Q  123 tgtggaacccttccattagaaaattcaagagag 155  Q
    |||||||||||||||||||||||||||||||||    
T  20301009 tgtggaacccttccattagaaaattcaagagag 20301041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 123 - 155
Target Start/End: Original strand, 20305422 - 20305454
Alignment:
Q  123 tgtggaacccttccattagaaaattcaagagag 155  Q
    |||||||||||||||||||||||||||||||||    
T  20305422 tgtggaacccttccattagaaaattcaagagag 20305454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 123 - 155
Target Start/End: Original strand, 20309826 - 20309858
Alignment:
Q  123 tgtggaacccttccattagaaaattcaagagag 155  Q
    |||||||||||||||||||||||||||||||||    
T  20309826 tgtggaacccttccattagaaaattcaagagag 20309858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 149
Target Start/End: Original strand, 23691510 - 23691543
Alignment:
Q  116 tttcgactgtggaacccttccattagaaaattca 149  Q
    |||||| |||||||||||||||||||||||||||    
T  23691510 tttcgattgtggaacccttccattagaaaattca 23691543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 151
Target Start/End: Complemental strand, 23754535 - 23754502
Alignment:
Q  118 tcgactgtggaacccttccattagaaaattcaag 151  Q
    |||| |||||||||||||||||||||||||||||    
T  23754535 tcgattgtggaacccttccattagaaaattcaag 23754502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 151
Target Start/End: Complemental strand, 23774569 - 23774536
Alignment:
Q  118 tcgactgtggaacccttccattagaaaattcaag 151  Q
    |||| |||||||||||||||||||||||||||||    
T  23774569 tcgattgtggaacccttccattagaaaattcaag 23774536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 151
Target Start/End: Complemental strand, 23819990 - 23819957
Alignment:
Q  118 tcgactgtggaacccttccattagaaaattcaag 151  Q
    |||| |||||||||||||||||||||||||||||    
T  23819990 tcgattgtggaacccttccattagaaaattcaag 23819957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 151
Target Start/End: Complemental strand, 23861522 - 23861489
Alignment:
Q  118 tcgactgtggaacccttccattagaaaattcaag 151  Q
    |||| |||||||||||||||||||||||||||||    
T  23861522 tcgattgtggaacccttccattagaaaattcaag 23861489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 117 - 151
Target Start/End: Complemental strand, 31144899 - 31144865
Alignment:
Q  117 ttcgactgtggaacccttccattagaaaattcaag 151  Q
    ||||| |||||||||||||||||||||||||||||    
T  31144899 ttcgattgtggaacccttccattagaaaattcaag 31144865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University