View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15324_low_38 (Length: 312)

Name: NF15324_low_38
Description: NF15324
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15324_low_38
NF15324_low_38
[»] chr6 (56 HSPs)
chr6 (53-294)||(5000457-5000696)
chr6 (155-294)||(10339056-10339196)
chr6 (155-294)||(16766686-16766825)
chr6 (1-60)||(5000273-5000332)
chr6 (156-223)||(32978842-32978909)
chr6 (155-265)||(18367854-18367964)
chr6 (167-291)||(5970051-5970175)
chr6 (155-223)||(24645530-24645598)
chr6 (155-223)||(28152147-28152215)
chr6 (155-278)||(34073280-34073401)
chr6 (155-281)||(7248360-7248486)
chr6 (166-291)||(8713971-8714097)
chr6 (155-284)||(9629382-9629511)
chr6 (155-284)||(9107301-9107430)
chr6 (155-276)||(31384927-31385047)
chr6 (155-223)||(4877992-4878059)
chr6 (155-223)||(34595183-34595251)
chr6 (162-212)||(3398683-3398733)
chr6 (155-221)||(13360315-13360380)
chr6 (155-265)||(16488521-16488631)
chr6 (154-284)||(26562688-26562818)
chr6 (150-282)||(7265530-7265651)
chr6 (183-284)||(8931561-8931662)
chr6 (225-294)||(19040341-19040410)
chr6 (155-223)||(28715344-28715412)
chr6 (155-294)||(17435188-17435327)
chr6 (190-284)||(4040465-4040559)
chr6 (204-290)||(9195734-9195820)
chr6 (157-239)||(23130405-23130487)
chr6 (155-282)||(1532241-1532365)
chr6 (155-212)||(8776910-8776967)
chr6 (155-223)||(6898223-6898291)
chr6 (220-288)||(9025490-9025558)
chr6 (226-294)||(9658868-9658936)
chr6 (223-275)||(11784215-11784267)
chr6 (155-223)||(13364647-13364715)
chr6 (156-230)||(8389411-8389485)
chr6 (153-285)||(11352357-11352491)
chr6 (231-294)||(13851725-13851788)
chr6 (191-294)||(25038038-25038141)
chr6 (184-294)||(32313393-32313504)
chr6 (220-294)||(9027167-9027241)
chr6 (155-201)||(9027238-9027284)
chr6 (166-224)||(23771626-23771684)
chr6 (155-201)||(31959221-31959267)
chr6 (156-201)||(9025448-9025493)
chr6 (175-276)||(9522898-9522999)
chr6 (155-280)||(10294110-10294235)
chr6 (155-208)||(12236723-12236776)
chr6 (175-244)||(21223717-21223786)
chr6 (166-219)||(24831861-24831914)
chr6 (155-223)||(7378028-7378096)
chr6 (149-201)||(7625187-7625239)
chr6 (155-223)||(7977772-7977840)
chr6 (219-291)||(10888969-10889041)
chr6 (231-291)||(30866151-30866211)
[»] chr1 (65 HSPs)
chr1 (155-284)||(9828043-9828172)
chr1 (155-284)||(25361885-25362010)
chr1 (180-291)||(9629856-9629967)
chr1 (155-263)||(5944303-5944411)
chr1 (155-263)||(47989517-47989625)
chr1 (158-222)||(5898211-5898275)
chr1 (183-294)||(27471525-27471636)
chr1 (155-283)||(1486646-1486768)
chr1 (155-223)||(22515829-22515897)
chr1 (155-263)||(31694641-31694749)
chr1 (155-223)||(40258875-40258943)
chr1 (155-294)||(40917740-40917877)
chr1 (155-294)||(6414933-6415071)
chr1 (155-234)||(6427513-6427592)
chr1 (155-283)||(34371714-34371843)
chr1 (169-223)||(43492450-43492504)
chr1 (176-294)||(17831485-17831601)
chr1 (202-279)||(44482234-44482311)
chr1 (167-223)||(1815306-1815362)
chr1 (155-223)||(38078603-38078671)
chr1 (155-293)||(17754301-17754439)
chr1 (220-294)||(20157346-20157420)
chr1 (153-223)||(29163321-29163391)
chr1 (173-290)||(38503313-38503428)
chr1 (166-275)||(16164257-16164366)
chr1 (154-223)||(42359390-42359459)
chr1 (176-221)||(52284764-52284809)
chr1 (155-207)||(9690215-9690267)
chr1 (186-284)||(26238078-26238172)
chr1 (155-223)||(46348325-46348393)
chr1 (155-223)||(51410074-51410142)
chr1 (240-295)||(34298424-34298479)
chr1 (224-294)||(2896121-2896191)
chr1 (155-229)||(18556387-18556461)
chr1 (155-197)||(22881569-22881611)
chr1 (155-265)||(25934634-25934744)
chr1 (155-201)||(29144322-29144368)
chr1 (240-294)||(36878450-36878504)
chr1 (155-201)||(46940750-46940796)
chr1 (155-208)||(17778617-17778670)
chr1 (166-223)||(18190061-18190118)
chr1 (155-219)||(34741899-34741963)
chr1 (220-276)||(7918207-7918263)
chr1 (155-234)||(15765795-15765875)
chr1 (155-219)||(16297223-16297287)
chr1 (155-219)||(33202956-33203020)
chr1 (205-280)||(21038086-21038161)
chr1 (155-294)||(36905986-36906124)
chr1 (240-294)||(398781-398835)
chr1 (232-282)||(28674801-28674851)
chr1 (167-221)||(40181922-40181976)
chr1 (154-283)||(48147967-48148097)
chr1 (155-201)||(52903317-52903363)
chr1 (175-224)||(2896083-2896132)
chr1 (166-275)||(6612113-6612222)
chr1 (155-212)||(12919005-12919062)
chr1 (155-244)||(17408730-17408819)
chr1 (150-223)||(19637817-19637890)
chr1 (155-224)||(27965942-27966011)
chr1 (240-284)||(1262883-1262927)
chr1 (240-284)||(12443476-12443520)
chr1 (183-223)||(21530738-21530778)
chr1 (240-284)||(25098571-25098615)
chr1 (158-218)||(26830641-26830701)
chr1 (246-294)||(40285676-40285724)
[»] chr7 (52 HSPs)
chr7 (155-294)||(32308109-32308248)
chr7 (155-284)||(24339641-24339770)
chr7 (155-223)||(598257-598325)
chr7 (176-284)||(19206049-19206157)
chr7 (155-218)||(43027406-43027469)
chr7 (155-284)||(7438705-7438834)
chr7 (155-276)||(11665371-11665492)
chr7 (152-277)||(26033389-26033514)
chr7 (155-223)||(15680858-15680926)
chr7 (155-223)||(21880201-21880269)
chr7 (155-223)||(33994261-33994329)
chr7 (155-218)||(5409773-5409836)
chr7 (155-230)||(21831828-21831903)
chr7 (155-284)||(1433453-1433576)
chr7 (154-294)||(9408264-9408404)
chr7 (155-294)||(20549780-20549908)
chr7 (155-223)||(21864857-21864925)
chr7 (155-218)||(32093956-32094020)
chr7 (196-294)||(26329354-26329452)
chr7 (155-283)||(9778500-9778622)
chr7 (155-263)||(2334270-2334377)
chr7 (158-218)||(13770750-13770810)
chr7 (155-223)||(22484074-22484142)
chr7 (155-223)||(32287405-32287473)
chr7 (177-224)||(7973087-7973134)
chr7 (175-209)||(10043007-10043041)
chr7 (240-294)||(26733293-26733347)
chr7 (157-207)||(40287306-40287356)
chr7 (155-224)||(3554448-3554517)
chr7 (175-220)||(8234198-8234243)
chr7 (192-276)||(9933282-9933364)
chr7 (183-284)||(15902821-15902922)
chr7 (226-291)||(17851423-17851488)
chr7 (155-211)||(20545186-20545242)
chr7 (240-284)||(29787385-29787429)
chr7 (166-209)||(3294257-3294300)
chr7 (256-294)||(598197-598235)
chr7 (156-218)||(2533761-2533823)
chr7 (155-201)||(6490787-6490833)
chr7 (155-201)||(10359670-10359716)
chr7 (228-294)||(22868031-22868097)
chr7 (155-201)||(24105749-24105795)
chr7 (155-201)||(40131941-40131987)
chr7 (225-294)||(9482923-9482992)
chr7 (225-294)||(42720891-42720960)
chr7 (225-277)||(3721099-3721151)
chr7 (187-223)||(7197271-7197307)
chr7 (203-284)||(8842318-8842395)
chr7 (155-207)||(18035807-18035858)
chr7 (240-284)||(23191895-23191939)
chr7 (240-284)||(30731036-30731080)
chr7 (184-292)||(48246773-48246881)
[»] chr4 (64 HSPs)
chr4 (155-281)||(30982809-30982935)
chr4 (155-291)||(24613632-24613768)
chr4 (155-284)||(22234821-22234951)
chr4 (155-282)||(36635325-36635447)
chr4 (155-292)||(47263977-47264114)
chr4 (155-223)||(23292928-23292996)
chr4 (175-294)||(903911-904030)
chr4 (149-212)||(29205528-29205591)
chr4 (157-223)||(12797282-12797348)
chr4 (155-293)||(23861371-23861500)
chr4 (155-211)||(715547-715603)
chr4 (155-211)||(752873-752929)
chr4 (155-223)||(12895216-12895284)
chr4 (155-263)||(19312355-19312463)
chr4 (166-282)||(30522858-30522973)
chr4 (155-223)||(34306746-34306814)
chr4 (155-218)||(14465007-14465070)
chr4 (155-294)||(19482657-19482796)
chr4 (155-285)||(38148656-38148786)
chr4 (155-284)||(3947703-3947826)
chr4 (168-290)||(5832638-5832760)
chr4 (155-279)||(847955-848079)
chr4 (155-223)||(28964190-28964258)
chr4 (155-223)||(35157927-35157995)
chr4 (203-294)||(4383357-4383447)
chr4 (225-284)||(8423719-8423778)
chr4 (157-223)||(20743210-20743277)
chr4 (155-294)||(44081509-44081647)
chr4 (153-223)||(4157198-4157268)
chr4 (153-223)||(4157485-4157555)
chr4 (240-294)||(22440616-22440670)
chr4 (155-224)||(8423660-8423729)
chr4 (166-223)||(21945552-21945609)
chr4 (155-212)||(35161096-35161153)
chr4 (214-294)||(35723374-35723455)
chr4 (155-200)||(37203324-37203369)
chr4 (156-201)||(46715416-46715461)
chr4 (166-223)||(49431075-49431132)
chr4 (155-211)||(3064870-3064926)
chr4 (155-223)||(16073443-16073511)
chr4 (183-223)||(29205493-29205533)
chr4 (219-294)||(5775353-5775427)
chr4 (155-210)||(7214468-7214523)
chr4 (207-282)||(21658797-21658872)
chr4 (160-207)||(21873309-21873356)
chr4 (160-207)||(21929170-21929217)
chr4 (155-229)||(24343555-24343630)
chr4 (155-265)||(5414103-5414213)
chr4 (155-284)||(11931279-11931408)
chr4 (159-201)||(30094084-30094126)
chr4 (150-207)||(482180-482237)
chr4 (155-224)||(21345475-21345544)
chr4 (166-223)||(30103310-30103367)
chr4 (155-192)||(30299009-30299046)
chr4 (155-192)||(30327877-30327914)
chr4 (178-211)||(36409469-36409502)
chr4 (178-211)||(36423635-36423668)
chr4 (173-222)||(40179596-40179645)
chr4 (231-284)||(40613449-40613502)
chr4 (155-223)||(53381532-53381601)
chr4 (240-284)||(1747211-1747255)
chr4 (155-207)||(12884349-12884401)
chr4 (240-284)||(23293002-23293046)
chr4 (158-294)||(30838199-30838335)
[»] chr8 (48 HSPs)
chr8 (155-294)||(22651965-22652104)
chr8 (155-294)||(29510235-29510374)
chr8 (155-284)||(11944664-11944793)
chr8 (155-260)||(29447467-29447572)
chr8 (155-291)||(8343308-8343444)
chr8 (155-275)||(11803267-11803387)
chr8 (155-291)||(29447041-29447177)
chr8 (155-294)||(15816060-15816199)
chr8 (155-284)||(24362132-24362262)
chr8 (173-223)||(44462155-44462205)
chr8 (173-223)||(44469688-44469738)
chr8 (158-283)||(12570669-12570793)
chr8 (157-223)||(5813641-5813707)
chr8 (175-221)||(31557047-31557093)
chr8 (158-283)||(12570443-12570567)
chr8 (159-223)||(33405330-33405394)
chr8 (231-291)||(34897077-34897137)
chr8 (157-275)||(4122182-4122300)
chr8 (155-201)||(8343038-8343084)
chr8 (155-229)||(12402617-12402691)
chr8 (166-212)||(22943302-22943348)
chr8 (155-265)||(26902106-26902216)
chr8 (154-223)||(926729-926798)
chr8 (155-224)||(14134747-14134816)
chr8 (154-223)||(20679336-20679405)
chr8 (198-294)||(28384967-28385064)
chr8 (155-223)||(3951478-3951546)
chr8 (155-275)||(6065588-6065708)
chr8 (224-276)||(14134706-14134758)
chr8 (155-234)||(27067233-27067310)
chr8 (155-219)||(36450696-36450760)
chr8 (155-294)||(4673356-4673495)
chr8 (159-222)||(38079049-38079112)
chr8 (161-223)||(126295-126357)
chr8 (203-289)||(4611528-4611614)
chr8 (208-285)||(29776034-29776109)
chr8 (248-290)||(36934663-36934705)
chr8 (159-201)||(40064033-40064075)
chr8 (155-223)||(17751704-17751773)
chr8 (155-223)||(17760691-17760760)
chr8 (246-283)||(18067956-18067993)
chr8 (155-212)||(18407779-18407836)
chr8 (158-282)||(22197676-22197800)
chr8 (155-223)||(949207-949275)
chr8 (225-277)||(3025557-3025609)
chr8 (155-223)||(24413501-24413569)
chr8 (240-284)||(39954295-39954339)
chr8 (153-201)||(44067598-44067646)
[»] scaffold0036 (1 HSPs)
scaffold0036 (155-276)||(9678-9799)
[»] chr3 (50 HSPs)
chr3 (155-282)||(8039766-8039893)
chr3 (154-294)||(4987221-4987361)
chr3 (155-223)||(40993277-40993345)
chr3 (153-292)||(29508435-29508569)
chr3 (155-284)||(15796225-15796354)
chr3 (155-223)||(20503514-20503582)
chr3 (155-223)||(55401124-55401192)
chr3 (155-282)||(17005550-17005677)
chr3 (202-291)||(16192728-16192817)
chr3 (155-284)||(34185054-34185183)
chr3 (177-277)||(14832105-14832205)
chr3 (172-294)||(2620003-2620123)
chr3 (155-218)||(27505305-27505368)
chr3 (159-284)||(25064908-25065031)
chr3 (184-294)||(26290360-26290470)
chr3 (166-276)||(28812522-28812632)
chr3 (155-201)||(40052383-40052429)
chr3 (155-284)||(49651718-49651846)
chr3 (153-201)||(25775578-25775626)
chr3 (155-223)||(8789490-8789560)
chr3 (166-284)||(11313737-11313860)
chr3 (240-294)||(1438793-1438847)
chr3 (160-218)||(3631738-3631796)
chr3 (150-224)||(8842377-8842451)
chr3 (157-223)||(25093551-25093617)
chr3 (155-221)||(26492147-26492213)
chr3 (155-284)||(37077357-37077487)
chr3 (157-290)||(11665937-11666070)
chr3 (155-196)||(34910393-34910434)
chr3 (155-218)||(5440969-5441033)
chr3 (155-223)||(11252025-11252093)
chr3 (246-294)||(13620786-13620834)
chr3 (155-211)||(15999952-16000008)
chr3 (203-282)||(1550141-1550220)
chr3 (225-284)||(7614416-7614475)
chr3 (225-284)||(7928449-7928508)
chr3 (166-201)||(21720843-21720878)
chr3 (184-223)||(45451602-45451641)
chr3 (225-280)||(49505155-49505210)
chr3 (240-294)||(15544682-15544736)
chr3 (155-201)||(25074866-25074912)
chr3 (166-219)||(7171554-7171607)
chr3 (155-224)||(18426997-18427066)
chr3 (152-201)||(24204980-24205029)
chr3 (208-277)||(28678309-28678378)
chr3 (155-207)||(8101894-8101946)
chr3 (240-284)||(8383256-8383300)
chr3 (231-283)||(10690269-10690321)
chr3 (240-292)||(11493377-11493429)
chr3 (184-224)||(14338454-14338494)
[»] chr5 (47 HSPs)
chr5 (155-284)||(3966502-3966631)
chr5 (155-284)||(7677704-7677833)
chr5 (155-294)||(21522739-21522878)
chr5 (155-294)||(21533305-21533444)
chr5 (155-284)||(32766874-32767003)
chr5 (153-284)||(19579700-19579831)
chr5 (158-294)||(15410382-15410518)
chr5 (156-284)||(18592072-18592200)
chr5 (155-294)||(30098315-30098454)
chr5 (205-282)||(12264810-12264887)
chr5 (166-223)||(15382534-15382591)
chr5 (154-223)||(21190997-21191066)
chr5 (158-294)||(7174954-7175089)
chr5 (203-283)||(25817495-25817575)
chr5 (155-282)||(30502330-30502446)
chr5 (155-282)||(30542673-30542789)
chr5 (155-265)||(21814279-21814389)
chr5 (214-276)||(22423802-22423864)
chr5 (155-284)||(11685938-11686066)
chr5 (155-224)||(17123096-17123164)
chr5 (238-294)||(19438332-19438388)
chr5 (155-223)||(28588616-28588684)
chr5 (155-283)||(41091188-41091316)
chr5 (177-292)||(12641665-12641780)
chr5 (224-291)||(12927646-12927713)
chr5 (155-273)||(14873527-14873639)
chr5 (183-234)||(21542079-21542130)
chr5 (155-265)||(6401516-6401626)
chr5 (158-212)||(21194068-21194122)
chr5 (155-201)||(21351852-21351898)
chr5 (155-212)||(16304368-16304425)
chr5 (155-276)||(40131628-40131749)
chr5 (153-218)||(43001859-43001924)
chr5 (154-223)||(18421778-18421851)
chr5 (155-223)||(42893409-42893477)
chr5 (207-294)||(6035472-6035558)
chr5 (177-276)||(30183556-30183655)
chr5 (155-201)||(2436982-2437028)
chr5 (155-201)||(19820330-19820376)
chr5 (208-294)||(21351889-21351975)
chr5 (157-223)||(30098982-30099048)
chr5 (155-205)||(38464315-38464365)
chr5 (161-201)||(17088362-17088402)
chr5 (232-280)||(17593730-17593778)
chr5 (240-292)||(22299497-22299548)
chr5 (240-284)||(27932234-27932278)
chr5 (240-284)||(28588690-28588734)
[»] scaffold0008 (1 HSPs)
scaffold0008 (155-282)||(263303-263430)
[»] chr2 (44 HSPs)
chr2 (154-223)||(2438660-2438729)
chr2 (155-284)||(27286223-27286352)
chr2 (155-223)||(18840955-18841023)
chr2 (155-283)||(44860320-44860448)
chr2 (155-234)||(26769560-26769639)
chr2 (155-283)||(11223795-11223922)
chr2 (155-291)||(22084758-22084899)
chr2 (155-274)||(37419752-37419871)
chr2 (156-294)||(17776576-17776714)
chr2 (155-294)||(21782746-21782888)
chr2 (155-284)||(24975257-24975385)
chr2 (155-283)||(4207857-4207984)
chr2 (155-223)||(15972922-15972990)
chr2 (150-294)||(34784908-34785052)
chr2 (155-265)||(36096306-36096416)
chr2 (226-294)||(31808066-31808134)
chr2 (154-294)||(36756274-36756414)
chr2 (155-219)||(38117101-38117165)
chr2 (155-214)||(15907853-15907912)
chr2 (231-294)||(23718015-23718078)
chr2 (231-294)||(24105687-24105750)
chr2 (155-201)||(15909572-15909618)
chr2 (155-218)||(35449561-35449626)
chr2 (184-284)||(18889550-18889651)
chr2 (154-223)||(19942314-19942383)
chr2 (175-223)||(5367241-5367289)
chr2 (240-284)||(21616761-21616805)
chr2 (166-226)||(27084315-27084375)
chr2 (155-223)||(37559026-37559094)
chr2 (156-223)||(21091772-21091839)
chr2 (155-201)||(10535687-10535733)
chr2 (155-217)||(19959881-19959943)
chr2 (246-284)||(37411266-37411304)
chr2 (175-275)||(2331802-2331900)
chr2 (240-281)||(25846743-25846784)
chr2 (183-284)||(28677908-28678003)
chr2 (241-294)||(29970566-29970619)
chr2 (155-223)||(37497169-37497238)
chr2 (240-284)||(1327977-1328021)
chr2 (198-294)||(4882670-4882766)
chr2 (240-284)||(18276520-18276564)
chr2 (155-223)||(20242669-20242737)
chr2 (155-223)||(30404792-30404860)
chr2 (155-211)||(34993924-34993980)
[»] scaffold0003 (1 HSPs)
scaffold0003 (155-294)||(241583-241722)
[»] scaffold0044 (1 HSPs)
scaffold0044 (175-293)||(53170-53288)
[»] scaffold0136 (1 HSPs)
scaffold0136 (155-284)||(3780-3909)
[»] scaffold0019 (1 HSPs)
scaffold0019 (155-234)||(71774-71853)
[»] scaffold0004 (1 HSPs)
scaffold0004 (155-294)||(92796-92939)
[»] scaffold0050 (1 HSPs)
scaffold0050 (156-223)||(70327-70394)
[»] scaffold0123 (1 HSPs)
scaffold0123 (185-283)||(44486-44584)
[»] scaffold0086 (1 HSPs)
scaffold0086 (159-232)||(2979-3052)
[»] scaffold0793 (1 HSPs)
scaffold0793 (155-211)||(4823-4879)
[»] scaffold0652 (1 HSPs)
scaffold0652 (155-223)||(404-472)
[»] scaffold0053 (1 HSPs)
scaffold0053 (155-223)||(8847-8915)
[»] scaffold0039 (1 HSPs)
scaffold0039 (172-284)||(84921-85033)
[»] scaffold1528 (1 HSPs)
scaffold1528 (198-293)||(1025-1120)
[»] scaffold0361 (1 HSPs)
scaffold0361 (155-219)||(14580-14644)
[»] scaffold0168 (1 HSPs)
scaffold0168 (207-275)||(21051-21119)
[»] scaffold0020 (1 HSPs)
scaffold0020 (220-290)||(135308-135378)
[»] scaffold0011 (1 HSPs)
scaffold0011 (150-223)||(17539-17612)
[»] scaffold0697 (1 HSPs)
scaffold0697 (183-223)||(1693-1733)
[»] scaffold0085 (1 HSPs)
scaffold0085 (248-292)||(26384-26428)


Alignment Details
Target: chr6 (Bit Score: 183; Significance: 5e-99; HSPs: 56)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 53 - 294
Target Start/End: Original strand, 5000457 - 5000696
Alignment:
Q  53 tttcactgtccctctgtgtgtctatcactctctgatggacactgtgcttctccaacagttacatgacaaagaataatcnnnnnnnnnnctctcactttat 152  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          ||| ||||| ||    
T  5000457 tttctctgtccctctgtgtgtctatcactctctgatggacactgtgcttctccaacagttacatgacaaagaataatctttttttc--ctcccacttcat 5000554  T
Q  153 caatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaat 252  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5000555 caatgaagcacgaacactcttcggattagacgtgtcctggtgtcggatatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaat 5000654  T
Q  253 catgtgattttctcgaattattagcggtgtcgatgtgtcagt 294  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  5000655 catgtgattttctcgaattattagcggtgtcgacgtgtcagt 5000696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 155 - 294
Target Start/End: Original strand, 10339056 - 10339196
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaatt-atactgaatc 253  Q
    |||||||||| |||||| || |||||| |||||||| ||||||||||||||||||||| |||||||||| | |||||||| ||| |||| | |||||||     
T  10339056 atgaagcacggacactcctccgattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaccgacacggcactgacacatataattaacactgaatt 10339155  T
Q  254 atgtgattttctcgaattattagcggtgtcgatgtgtcagt 294  Q
    ||||||||||||| ||||| | |||||||||  ||||||||    
T  10339156 atgtgattttctcaaattaatcgcggtgtcggcgtgtcagt 10339196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 155 - 294
Target Start/End: Complemental strand, 16766825 - 16766686
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    |||||||||| ||| |||||||||||| ||||||||||||||||||| |||| ||||| |||||||||| ||||| ||||  |  ||||| ||||||| |    
T  16766825 atgaagcacggacattcttcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacacgacaccgacacttgtaattacactgaatta 16766726  T
Q  255 tgtgattttctcgaattattagcggtgtcgatgtgtcagt 294  Q
    ||||||||| || |||||||||| ||||||  ||||||||    
T  16766725 tgtgattttttcaaattattagctgtgtcggcgtgtcagt 16766686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 5000273 - 5000332
Alignment:
Q  1 agatgcttctgttatgaatttgtggaccatttattgagtcataagtgtactctttcactg 60  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  5000273 agatgcttctgttatgaatttgtggaccatttattgagtcataattgtactctttcactg 5000332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 156 - 223
Target Start/End: Original strand, 32978842 - 32978909
Alignment:
Q  156 tgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    ||||||||| |||||| | |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  32978842 tgaagcacggacactccttggattagacgtgtcccggtgtcggacatgtgtcgtgtccgacaccgaca 32978909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 155 - 265
Target Start/End: Complemental strand, 18367964 - 18367854
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    |||||||||| |||||| | |||| || |||||||| ||||| |||||||||||||||||||||||||| ||||| |||| ||| ||||| |||| ||      
T  18367964 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacatgtgtcgtgtctgacaccgacacgacaccgacacatataattacactgcattt 18367865  T
Q  255 tgtgattttct 265  Q
    |||||||||||    
T  18367864 tgtgattttct 18367854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 167 - 291
Target Start/End: Original strand, 5970051 - 5970175
Alignment:
Q  167 cactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctc 266  Q
    ||||| ||||||| | ||||||||| ||||||| |||||||||||| |||||||||| |||||  |||| |  ||||| ||||||| |||||||||| ||    
T  5970051 cactcctcggattgggcgtgtcccgatgtcggaaatgtgtcgtgtccgacaccgacacgacacccacatttgtaattacactgaattatgtgattttttc 5970150  T
Q  267 gaattattagcggtgtcgatgtgtc 291  Q
     |||||||| | ||||||| |||||    
T  5970151 aaattattaactgtgtcgacgtgtc 5970175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 24645598 - 24645530
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    |||||||||  |||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||    
T  24645598 atgaagcacagacactcttcggattagacgtgtcttggtgtcggacacgtgtcgtgtctgacaccgaca 24645530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 28152215 - 28152147
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    ||||||||||||||||| ||||||||| | ||||||||||||||||| |||||||||| ||||||||||    
T  28152215 atgaagcacgaacactcctcggattaggcctgtcccggtgtcggacacgtgtcgtgtccgacaccgaca 28152147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 155 - 278
Target Start/End: Original strand, 34073280 - 34073401
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    |||||||||| |||||| ||| |||||| ||||||||||||||| ||  ||||||||  |||||||||| ||||| |||  ||| ||||| ||||||| |    
T  34073280 atgaagcacggacactcctcgaattagaggtgtcccggtgtcgg-cacatgtcgtgta-gacaccgacacgacaccgacccatataattacactgaatta 34073377  T
Q  255 tgtgattttctcgaattattagcg 278  Q
    || ||||||||| |||||||||||    
T  34073378 tgagattttctcaaattattagcg 34073401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 281
Target Start/End: Complemental strand, 7248486 - 7248360
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    |||||||||| |||||| ||||||| |||||||||||||||||||||  ||| |||||  ||||||||| ||| |  ||| ||| |||||  |||||| |    
T  7248486 atgaagcacggacactcctcggatttgacgtgtcccggtgtcggacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaatta 7248387  T
Q  255 tgtgattttctcgaattattagcggtg 281  Q
    |||||||| |||  |||||||| ||||    
T  7248386 tgtgatttcctcagattattagtggtg 7248360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 291
Target Start/End: Complemental strand, 8714097 - 8713971
Alignment:
Q  166 acactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtga-ttttc 264  Q
    |||||| ||||||| | ||||||||| ||||||| |||||||||||| |||||||||| |||||  |||| |  ||||| ||||||| |||||| ||||     
T  8714097 acactcctcggattgggcgtgtcccgatgtcggaaatgtgtcgtgtccgacaccgacacgacacccacatttgtaattacactgaattatgtgatttttt 8713998  T
Q  265 tcgaattattagcggtgtcgatgtgtc 291  Q
    || |||||||| | ||||||| |||||    
T  8713997 tcaaattattaactgtgtcgacgtgtc 8713971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 284
Target Start/End: Complemental strand, 9629511 - 9629382
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacat-gacactgacatataaaattatactgaatc 253  Q
    |||||||| | |||||| |||||||||||||||| | ||||||||||  ||| ||||| ||||| ||||  ||||| |||| ||| ||||| | |||||     
T  9629511 atgaagcatggacactcctcggattagacgtgtctcagtgtcggacacatgttgtgtccgacac-gacaccgacaccgacacatataattacattgaatt 9629413  T
Q  254 atgtgattttctcgaattattagcggtgtcg 284  Q
    ||||||||||||| ||||||| |||||||||    
T  9629412 atgtgattttctcaaattattggcggtgtcg 9629382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 155 - 284
Target Start/End: Original strand, 9107301 - 9107430
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    ||||||||||  ||||| |||||||||  ||||||||||||||||||   || ||||| |||||||||| ||||| ||||  |  ||||| |||||||      
T  9107301 atgaagcacgggcactcctcggattaggtgtgtcccggtgtcggacacacgttgtgtccgacaccgacacgacaccgacacttgtaattacactgaattt 9107400  T
Q  255 tgtgattttctcgaattattagcggtgtcg 284  Q
    ||||||||| || |||||||||| ||||||    
T  9107401 tgtgattttttcaaattattagctgtgtcg 9107430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 155 - 276
Target Start/End: Complemental strand, 31385047 - 31384927
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    |||||||||| |||||| | ||||||| ||||||||||||| ||||| ||||||||||  ||| | ||| ||||||||||  |  ||||| ||||||| |    
T  31385047 atgaagcacggacactccttggattaggcgtgtcccggtgtaggacacgtgtcgtgtccaaca-ctacacgacactgacacttgtaattacactgaatta 31384949  T
Q  255 tgtgattttctcgaattattag 276  Q
    ||||||||| || |||||||||    
T  31384948 tgtgattttttcaaattattag 31384927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 4878059 - 4877992
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    |||||||||| |||||| ||||||||| ||||||| | |||||||||||||||||||| ||||||||||    
T  4878059 atgaagcacggacactcctcggattaggcgtgtcctg-tgtcggacatgtgtcgtgtccgacaccgaca 4877992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 34595251 - 34595183
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    |||||||||| |||||| |||||||||  ||||||||||||| |||| |||||||||| ||||||||||    
T  34595251 atgaagcacggacactcctcggattaggtgtgtcccggtgtcagacacgtgtcgtgtccgacaccgaca 34595183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 162 - 212
Target Start/End: Complemental strand, 3398733 - 3398683
Alignment:
Q  162 acgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtc 212  Q
    |||||||||| || |||||||||||| ||||||||||||||||||||||||    
T  3398733 acgaacactcctctgattagacgtgttccggtgtcggacatgtgtcgtgtc 3398683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 155 - 221
Target Start/End: Original strand, 13360315 - 13360380
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccga 221  Q
    |||||||||| |||||||||||||||| |||||| | ||||||||||| ||| ||||||||||||||    
T  13360315 atgaagcacggacactcttcggattaggcgtgtctcagtgtcggacat-tgttgtgtctgacaccga 13360380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 155 - 265
Target Start/End: Original strand, 16488521 - 16488631
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    |||||||||||||| || | |||| || |||||||| ||| | |||| |||||||||| |||||||||| ||||| |||| ||| ||||| |||| ||      
T  16488521 atgaagcacgaacattccttggataaggcgtgtccccgtgccagacacgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgcattt 16488620  T
Q  255 tgtgattttct 265  Q
    |||||||||||    
T  16488621 tgtgattttct 16488631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 154 - 284
Target Start/End: Complemental strand, 26562818 - 26562688
Alignment:
Q  154 aatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatc 253  Q
    ||||||| |||||||||  || |||||| | |||| |  | ||||||||||| |||||  |||||||||| ||||  |||| ||| ||||| |||||||     
T  26562818 aatgaagtacgaacacttctcagattagccatgtctctatatcggacatgtgccgtgttcgacaccgacacgacatcgacacatataattacactgaatt 26562719  T
Q  254 atgtgattttctcgaattattagcggtgtcg 284  Q
    ||||||||||||| |||| ||||| ||||||    
T  26562718 atgtgattttctcaaatttttagcagtgtcg 26562688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 282
Target Start/End: Original strand, 7265530 - 7265651
Alignment:
Q  150 tatcaatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactg 249  Q
    ||||||||||||||| || ||| ||||||||| | | | |||||||||||||||| | ||||| |||||||||         ||||||  ||||| ||||    
T  7265530 tatcaatgaagcacggacgctcctcggattaggcatattccggtgtcggacatgtattgtgtccgacaccgac---------acatat--aattacactg 7265618  T
Q  250 aatcatgtgattttctcgaattattagcggtgt 282  Q
    ||| ||||||||||||| |||||||||||||||    
T  7265619 aattatgtgattttctcaaattattagcggtgt 7265651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 284
Target Start/End: Original strand, 8931561 - 8931662
Alignment:
Q  183 cgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgt 282  Q
    |||||| | |||| ||| ||||||||  ||||||||||||| ||||  |||| ||| ||||||||||||| |||| |||||||| |||| ||||| ||||    
T  8931561 cgtgtctccgtgttggatatgtgtcgcatctgacaccgacacgacatcgacacatataattatactgaattatgttattttctcaaatttttagctgtgt 8931660  T
Q  283 cg 284  Q
    ||    
T  8931661 cg 8931662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 294
Target Start/End: Complemental strand, 19040410 - 19040341
Alignment:
Q  225 gacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagt 294  Q
    ||||| |||| ||| ||||| ||||||| ||||||||||||| |||||||||||||||||  ||||||||    
T  19040410 gacacagacacatataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagt 19040341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 28715412 - 28715344
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    |||||||||| |||||  ||| ||||| ||||||||||||||| ||| |||||||||| ||||||||||    
T  28715412 atgaagcacgtacacttctcgaattaggcgtgtcccggtgtcgaacacgtgtcgtgtccgacaccgaca 28715344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 155 - 294
Target Start/End: Complemental strand, 17435327 - 17435188
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    |||||| ||| ||||| ||| ||||||||||||||| |||||| ||| |||||||||| |||| |||||  ||||| |||  |  ||||| ||||||| |    
T  17435327 atgaagtacggacacttttcagattagacgtgtcccagtgtcgaacacgtgtcgtgtccgacatcgacaaaacactaacacttgtaattacactgaatta 17435228  T
Q  255 tgtgattttctcgaattattagcggtgtcgatgtgtcagt 294  Q
    ||| ||||| |  ||||||||||  |||||| || |||||    
T  17435227 tgtaattttttaaaattattagctatgtcgacgtatcagt 17435188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 284
Target Start/End: Complemental strand, 4040559 - 4040465
Alignment:
Q  190 cggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcg 284  Q
    |||||| ||| | ||||||||||||| | ||| | ||| | |||||||| ||||||||||||| ||| ||||||||  ||||||||| |||||||    
T  4040559 cggtgttggatacgtgtcgtgtctgatatcgagacgacgccgacatatataattatactgaataatgcgattttcttaaattattagtggtgtcg 4040465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 290
Target Start/End: Original strand, 9195734 - 9195820
Alignment:
Q  204 tgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgt 290  Q
    ||||||||| |||||| ||| ||||| |||| ||| ||||| ||| ||| |||| |||||||| |||||||||  ||||||||||||    
T  9195734 tgtcgtgtcagacacctacacgacaccgacacatataattacactaaattatgtcattttctcaaattattaggagtgtcgatgtgt 9195820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 239
Target Start/End: Original strand, 23130405 - 23130487
Alignment:
Q  157 gaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataa 239  Q
    |||||||  |||||| || |||||| | ||||||| | || |||| ||||||||||||||||| |||||||||||||| ||||    
T  23130405 gaagcacatacactcctcagattaggcatgtcccgatatcagacacgtgtcgtgtctgacaccaacatgacactgacacataa 23130487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 282
Target Start/End: Complemental strand, 1532365 - 1532241
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    |||||||||| |||||| ||| ||||||  || |||| ||| | ||||||||  ||||||||||| ||| |||||   || ||| ||||| ||||||| |    
T  1532365 atgaagcacggacactcctcgaattagatatgccccgatgtagaacatgtgtgatgtctgacaccaacacgacac---cacatataattacactgaatta 1532269  T
Q  255 tgtgattttctcgaattattagcggtgt 282  Q
    ||| ||||| || |||||||||||||||    
T  1532268 tgtaattttatcaaattattagcggtgt 1532241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 212
Target Start/End: Original strand, 8776910 - 8776967
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtc 212  Q
    |||||||||| |||||| |||||||||  ||||| |||||||||||| ||||||||||    
T  8776910 atgaagcacggacactcctcggattaggtgtgtctcggtgtcggacacgtgtcgtgtc 8776967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 6898223 - 6898291
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    ||||||||||||||||| ||||||||| |||||  |||||| ||||| |  ||||||| ||||||||||    
T  6898223 atgaagcacgaacactcatcggattaggcgtgtttcggtgttggacacgcttcgtgtccgacaccgaca 6898291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 288
Target Start/End: Original strand, 9025490 - 9025558
Alignment:
Q  220 gacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgt 288  Q
    |||| ||||| |||| ||| ||||| ||||||| ||||||||||||| |||||||||| ||||| ||||    
T  9025490 gacacgacaccgacacatataattacactgaattatgtgattttctcaaattattagcagtgtccatgt 9025558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 294
Target Start/End: Complemental strand, 9658936 - 9658868
Alignment:
Q  226 acactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagt 294  Q
    |||| |||| ||| ||||| ||||||| ||||||||||||  |||||||||||||||||  ||||||||    
T  9658936 acaccgacaaatataattacactgaattatgtgattttcttaaattattagcggtgtcggcgtgtcagt 9658868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 275
Target Start/End: Original strand, 11784215 - 11784267
Alignment:
Q  223 atgacactgacatataaaattatactgaatcatgtgattttctcgaattatta 275  Q
    ||||||| |||||||| ||||| ||||| ||||||||||||||| ||||||||    
T  11784215 atgacaccgacatatataattacactgattcatgtgattttctcaaattatta 11784267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 13364647 - 13364715
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    |||||||||  |||||| ||||| ||||||||||| |||||| ||||||| |||||||  |||||||||    
T  13364647 atgaagcacagacactcgtcggaatagacgtgtcctggtgtcagacatgtatcgtgtccaacaccgaca 13364715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 156 - 230
Target Start/End: Original strand, 8389411 - 8389485
Alignment:
Q  156 tgaagcacgaacactcttcggattagacgtgtcccggtgtcggaca-tgtgtcgtgtctgacaccgacatgacact 230  Q
    ||||||||| |||||| |||||||||  ||||||||||||||||||  |||| | ||| |||||||||||||||||    
T  8389411 tgaagcacggacactcctcggattaggtgtgtcccggtgtcggacaccgtgttg-gtccgacaccgacatgacact 8389485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 153 - 285
Target Start/End: Complemental strand, 11352491 - 11352357
Alignment:
Q  153 caatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaat 252  Q
    |||| ||||||| |||||||| || | | |||||||| | ||||||||| |||| |||||||| ||||||| |||| ||| | ||| ||||| |  ||||    
T  11352491 caataaagcacggacactctttgggtaaaacgtgtcctgatgtcggacacgtgttgtgtctgataccgacacgacattgatacatataattacaaggaat 11352392  T
Q  253 catgtgattttctcgaat--tattagcggtgtcga 285  Q
     | ||||||||||| | |  |||||||||||||||    
T  11352391 taggtgattttctcaacttatattagcggtgtcga 11352357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 231 - 294
Target Start/End: Complemental strand, 13851788 - 13851725
Alignment:
Q  231 gacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagt 294  Q
    |||| ||| ||||| ||||||| | || |||||||| |||||||||||||||||| ||||||||    
T  13851788 gacacatataattacactgaattacgttattttctcaaattattagcggtgtcgacgtgtcagt 13851725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 191 - 294
Target Start/End: Original strand, 25038038 - 25038141
Alignment:
Q  191 ggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgt 290  Q
    ||||||||||| |||||||||| |||||| |||  | || ||||| |  ||||| ||| ||| |||| |||||||| |||||||| ||||||| | ||||    
T  25038038 ggtgtcggacacgtgtcgtgtcggacaccaacacaataccgacatttgtaattacactaaattatgtaattttctcaaattattaacggtgtcaacgtgt 25038137  T
Q  291 cagt 294  Q
    ||||    
T  25038138 cagt 25038141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 184 - 294
Target Start/End: Complemental strand, 32313504 - 32313393
Alignment:
Q  184 gtgtcccggtgtcggacatgtgtc-gtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgt 282  Q
    |||||||||||| ||||||  ||| |||||||||||||||| |||||  ||| ||| ||||  | |||||||||| |||||||| | ||||||  |||||    
T  32313504 gtgtcccggtgttggacatacgtcagtgtctgacaccgacacgacacccacacatataattgcattgaatcatgttattttctcaacttattattggtgt 32313405  T
Q  283 cgatgtgtcagt 294  Q
    ||  ||||||||    
T  32313404 cggcgtgtcagt 32313393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 294
Target Start/End: Complemental strand, 9027241 - 9027167
Alignment:
Q  220 gacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagt 294  Q
    |||| ||||| |||| ||| ||||| || |||| |||||||| |||| |||||||||||||||||  ||||||||    
T  9027241 gacacgacaccgacacatataattacacggaattatgtgattatctcaaattattagcggtgtcggcgtgtcagt 9027167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 201
Target Start/End: Complemental strand, 9027284 - 9027238
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggaca 201  Q
    ||||||||| ||||||| | ||||||| |||||||||||||||||||    
T  9027284 atgaagcacaaacactccttggattagccgtgtcccggtgtcggaca 9027238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 224
Target Start/End: Complemental strand, 23771684 - 23771626
Alignment:
Q  166 acactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacat 224  Q
    ||||||||| | ||||||||||| | ||||||||||  ||||||||| |||||||||||    
T  23771684 acactcttcaggttagacgtgtctctgtgtcggacacatgtcgtgtccgacaccgacat 23771626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 201
Target Start/End: Complemental strand, 31959267 - 31959221
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggaca 201  Q
    |||||||||| |||||| |||||||||  ||||||||||||||||||    
T  31959267 atgaagcacggacactcctcggattaggtgtgtcccggtgtcggaca 31959221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 201
Target Start/End: Original strand, 9025448 - 9025493
Alignment:
Q  156 tgaagcacgaacactcttcggattagacgtgtcccggtgtcggaca 201  Q
    ||||||||| |||||  ||||||||| |||||||||||||||||||    
T  9025448 tgaagcacggacacttctcggattaggcgtgtcccggtgtcggaca 9025493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 276
Target Start/End: Complemental strand, 9522999 - 9522898
Alignment:
Q  175 ggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattatt 274  Q
    ||||||| |||||| |||||||||||| ||||||  || ||||||||||  |||| ||||  |  ||||| ||||||| |||||||||| |  |||||||    
T  9522999 ggattaggcgtgtctcggtgtcggacacgtgtcggatccgacaccgacacaacaccgacacttgtaattacactgaattatgtgatttttttaaattatt 9522900  T
Q  275 ag 276  Q
    ||    
T  9522899 ag 9522898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 280
Target Start/End: Complemental strand, 10294235 - 10294110
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    |||||||||  |||||| || ||||||  ||||||  || |||||||  ||||||||| |||||| ||| ||||| |||| ||| ||||| | ||||  |    
T  10294235 atgaagcacagacactcctcagattagctgtgtcctagtttcggacacatgtcgtgtccgacaccaacacgacaccgacacatataattacattgaaata 10294136  T
Q  255 tgtgattttctcgaattattagcggt 280  Q
    || |||| |||| |||||||||||||    
T  10294135 tgcgattatctcaaattattagcggt 10294110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 12236776 - 12236723
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcg 208  Q
    ||||||||||||||||| || | |||| |||||||||||| || ||||||||||    
T  12236776 atgaagcacgaacactcctcaggttaggcgtgtcccggtgccgaacatgtgtcg 12236723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 244
Target Start/End: Original strand, 21223717 - 21223786
Alignment:
Q  175 ggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaatta 244  Q
    ||||||| |||| |||| ||||||||| | || ||||  |||||||||| |||||||||||||| |||||    
T  21223717 ggattaggcgtgacccgttgtcggacacgcgttgtgttcgacaccgacacgacactgacatatataatta 21223786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 219
Target Start/End: Complemental strand, 24831914 - 24831861
Alignment:
Q  166 acactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacacc 219  Q
    |||||||||||||||||||||||||| |||| || || ||| |||| |||||||    
T  24831914 acactcttcggattagacgtgtcccgatgtcagatatatgttgtgtttgacacc 24831861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 7378096 - 7378028
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    |||||||||| |||||  || |||||| |||||||||||||||||    ||||||||| ||||||||||    
T  7378096 atgaagcacggacacttctcagattagccgtgtcccggtgtcggatgcatgtcgtgtccgacaccgaca 7378028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 7625239 - 7625187
Alignment:
Q  149 ttatcaatgaagcacgaacactcttcggattagacgtgtcccggtgtcggaca 201  Q
    ||||| ||||||||||||||||| | ||||||  ||||| |||||||||||||    
T  7625239 ttatctatgaagcacgaacactccttggattaagcgtgttccggtgtcggaca 7625187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 7977772 - 7977840
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    ||||||||||||||||| |  |||||| |||||  || |||||||||| ||| ||||| ||||||||||    
T  7977772 atgaagcacgaacactccttagattaggcgtgtttcgttgtcggacatatgttgtgtccgacaccgaca 7977840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 291
Target Start/End: Original strand, 10888969 - 10889041
Alignment:
Q  219 cgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtc 291  Q
    ||||| |||||| ||| ||| ||| | ||| ||| |||||||||| || |||||||||||||||| |||||||    
T  10888969 cgacacgacactaacacatataatcacactaaattatgtgattttatcaaattattagcggtgtctatgtgtc 10889041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 291
Target Start/End: Original strand, 30866151 - 30866211
Alignment:
Q  231 gacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtc 291  Q
    |||| ||| ||||| | ||||| ||||||||||||| ||||||||||||||| | ||||||    
T  30866151 gacacatataattacattgaattatgtgattttctcaaattattagcggtgttggtgtgtc 30866211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 82; Significance: 1e-38; HSPs: 65)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 155 - 284
Target Start/End: Complemental strand, 9828172 - 9828043
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||| ||||| |||| ||||||||| ||||||| |    
T  9828172 atgaagcacggacactcctcggattagacgtgtcccggtgtcggacacgtgtcgtgtctgacacggacacgacaccgacacataaaattacactgaatta 9828073  T
Q  255 tgtgattttctcgaattattagcggtgtcg 284  Q
    ||||||||| || ||||||||| |||||||    
T  9828072 tgtgattttatcaaattattagtggtgtcg 9828043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 155 - 284
Target Start/End: Complemental strand, 25362010 - 25361885
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    |||||||||| ||||||||||||||||  |||| ||||||||||||||||  |||||| |||||||||| |||||||||| ||| ||||| ||||||| |    
T  25362010 atgaagcacggacactcttcggattag--gtgttccggtgtcggacatgt--cgtgtccgacaccgacacgacactgacacatataattacactgaatta 25361915  T
Q  255 tgtgattttctcgaattattagcggtgtcg 284  Q
    |||||||||||| |||||| || |||||||    
T  25361914 tgtgattttctcaaattatcagtggtgtcg 25361885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 180 - 291
Target Start/End: Original strand, 9629856 - 9629967
Alignment:
Q  180 agacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcgg 279  Q
    ||||||||||||||||||||||||||||||||| |||| ||||| ||||| ||||  || ||| | ||||||| || ||||||| || ||||||||||||    
T  9629856 agacgtgtcccggtgtcggacatgtgtcgtgtccgacatcgacacgacaccgacacttataatcacactgaattatatgattttatcaaattattagcgg 9629955  T
Q  280 tgtcgatgtgtc 291  Q
    ||||||||||||    
T  9629956 tgtcgatgtgtc 9629967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 155 - 263
Target Start/End: Complemental strand, 5944411 - 5944303
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    ||||||||||||||||| ||||||||| ||| |||||||||||||||||||| ||||| | || ||||| ||||| ||||  || ||||| ||||||| |    
T  5944411 atgaagcacgaacactcctcggattaggcgtatcccggtgtcggacatgtgttgtgtccgtcatcgacacgacaccgacacttataattacactgaatta 5944312  T
Q  255 tgtgatttt 263  Q
    |||||||||    
T  5944311 tgtgatttt 5944303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 155 - 263
Target Start/End: Complemental strand, 47989625 - 47989517
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    |||||||||| |||||| ||||||||| ||||||||| |||| ||||||||||||||| |||||||||| ||||| ||||  |  ||||| ||||||| |    
T  47989625 atgaagcacggacactcctcggattaggcgtgtcccgatgtcagacatgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaatta 47989526  T
Q  255 tgtgatttt 263  Q
    |||||||||    
T  47989525 tgtgatttt 47989517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 158 - 222
Target Start/End: Original strand, 5898211 - 5898275
Alignment:
Q  158 aagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgac 222  Q
    ||||||| |||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  5898211 aagcacggacactcctcggattagacgtgtcccggtgttggacacgtgtcgtgtctgacaccgac 5898275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 183 - 294
Target Start/End: Original strand, 27471525 - 27471636
Alignment:
Q  183 cgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgt 282  Q
    ||||||||||||||||||| ||||||| ||  ||||||| |||||||  ||| ||  ||||| ||||||| ||||| ||||||| ||||||||||||| |    
T  27471525 cgtgtcccggtgtcggacacgtgtcgtatccaacaccgatatgacaccaacacatgtaattacactgaattatgtgcttttctcaaattattagcggtat 27471624  T
Q  283 cgatgtgtcagt 294  Q
    || |||||||||    
T  27471625 cggtgtgtcagt 27471636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 155 - 283
Target Start/End: Original strand, 1486646 - 1486768
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    |||||||||  |||||| ||||||||| ||||||||||||||||||| |||||||||      |||||| ||||| ||||  || ||||| ||||||| |    
T  1486646 atgaagcacagacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgt------ccgacacgacaccgacacttataattacactgaatta 1486739  T
Q  255 tgtgattttctcgaattattagcggtgtc 283  Q
    ||||||||| || |||||||||| |||||    
T  1486740 tgtgattttttcaaattattagctgtgtc 1486768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 22515829 - 22515897
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    |||||||||| |||||| ||||||||| |||||| |||||||||| |||||||||||| ||||||||||    
T  22515829 atgaagcacggacactcctcggattaggcgtgtctcggtgtcggatatgtgtcgtgtccgacaccgaca 22515897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 155 - 263
Target Start/End: Original strand, 31694641 - 31694749
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    |||||||||| |||||| || |||||| ||||| ||||||||| | |||||| ||||| |||||||||| ||||| ||||  |  ||||||||||||| |    
T  31694641 atgaagcacggacactcctcagattaggcgtgttccggtgtcgaatatgtgttgtgtccgacaccgacacgacaccgacacttgtaattatactgaatta 31694740  T
Q  255 tgtgatttt 263  Q
    |||||||||    
T  31694741 tgtgatttt 31694749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 40258875 - 40258943
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    |||||||| | |||||| ||||||||| ||||||| ||||||||||| |||||||||||||||||||||    
T  40258875 atgaagcatggacactcctcggattaggcgtgtcctggtgtcggacaggtgtcgtgtctgacaccgaca 40258943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 155 - 294
Target Start/End: Complemental strand, 40917877 - 40917740
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    |||||||||| ||| || ||||||||| ||||||||||||||||||| ||||||||||  ||||||||| ||||| || |  |  ||||| ||| |||      
T  40917877 atgaagcacggacagtcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacacgacaccgagacttgtaattacacttaat-- 40917780  T
Q  255 tgtgattttctcgaattattagcggtgtcgatgtgtcagt 294  Q
    ||||||||| || |||||||||| ||||||  ||||||||    
T  40917779 tgtgattttttcaaattattagctgtgtcggcgtgtcagt 40917740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 155 - 294
Target Start/End: Original strand, 6414933 - 6415071
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    |||||||||| |||||| |||||| | | ||||| ||||||| |||| |||||||||| |||| ||| ||||||| |||| ||  ||||| |||| || |    
T  6414933 atgaagcacggacactcctcggatgaaatgtgtcgcggtgtcagacacgtgtcgtgtccgacatcga-atgacaccgacacatctaattaaactgtatta 6415031  T
Q  255 tgtgattttctcgaattattagcggtgtcgatgtgtcagt 294  Q
    |||||||||||| ||| ||||||| |||||  ||||||||    
T  6415032 tgtgattttctcaaataattagcgatgtcggcgtgtcagt 6415071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 155 - 234
Target Start/End: Complemental strand, 6427592 - 6427513
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgaca 234  Q
    |||||||||| |||||| || |||||| ||||||||||||||||||| |||||||||| ||| || ||| ||||||||||    
T  6427592 atgaagcacggacactcatcagattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacgcctacacgacactgaca 6427513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 155 - 283
Target Start/End: Complemental strand, 34371843 - 34371714
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtc--ggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaat 252  Q
    ||||||||| |||||| || ||||| |||||||| |||| |   ||||| ||||||| || |||||| ||| ||||| |||| ||| ||||| |||||||    
T  34371843 atgaagcacaaacactttttggatttgacgtgtctcggtatattggacacgtgtcgtatccgacaccaacacgacaccgacacatataattacactgaat 34371744  T
Q  253 catgtgattttctcgaattattagcggtgtc 283  Q
     ||||||||||||| ||||||||||||||||    
T  34371743 tatgtgattttctc-aattattagcggtgtc 34371714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 43492450 - 43492504
Alignment:
Q  169 ctcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    ||||||||||||| ||||| |||||||||||||||||| ||||||||||||||||    
T  43492450 ctcttcggattaggcgtgtgccggtgtcggacatgtgttgtgtctgacaccgaca 43492504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 176 - 294
Target Start/End: Original strand, 17831485 - 17831601
Alignment:
Q  176 gattagacgtgtcccggtgtcggacatgtgtcg-tgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattatt 274  Q
    |||||| |||||||||||||||||||  ||||| |||| ||||| |||| |||   |||| |||  |||| ||||||| ||||||||||||| |||||||    
T  17831485 gattaggcgtgtcccggtgtcggacacatgtcggtgtccgacactgacacgac---gacacatatgattacactgaataatgtgattttctcaaattatt 17831581  T
Q  275 agcggtgtcgatgtgtcagt 294  Q
    ||||||||||  ||||||||    
T  17831582 agcggtgtcggcgtgtcagt 17831601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 202 - 279
Target Start/End: Complemental strand, 44482311 - 44482234
Alignment:
Q  202 tgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcgg 279  Q
    ||||||||||| |||||||||| ||||| |||| ||| ||||| ||||||| ||||||||||||| |||||| |||||    
T  44482311 tgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgaattatgtgattttctcaaattataagcgg 44482234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 1815362 - 1815306
Alignment:
Q  167 cactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    ||||| || |||||| |||||||||||||||||||||||||||||| ||||||||||    
T  1815362 cactcctcagattaggcgtgtcccggtgtcggacatgtgtcgtgtcggacaccgaca 1815306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 38078603 - 38078671
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    |||||||||||| |||| ||||||||| ||||||| ||||| | |||||||||||||| ||||||||||    
T  38078603 atgaagcacgaatactcctcggattaggcgtgtcctggtgttgaacatgtgtcgtgtccgacaccgaca 38078671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 155 - 293
Target Start/End: Complemental strand, 17754439 - 17754301
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    ||||||||||||||||| | ||| ||  ||||  | |||||  ||||| ||| |||||  |||||||||  ||||||||| ||| | ||| ||||||| |    
T  17754439 atgaagcacgaacactccttggactatccgtgctctggtgttagacatatgttgtgtccaacaccgacaccacactgacacatatagttacactgaatta 17754340  T
Q  255 tgtgattttctcgaattattagcggtgtcgatgtgtcag 293  Q
    ||| ||||| || ||||||||||||||||| ||||||||    
T  17754339 tgtaattttttcaaattattagcggtgtcggtgtgtcag 17754301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 220 - 294
Target Start/End: Original strand, 20157346 - 20157420
Alignment:
Q  220 gacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagt 294  Q
    |||| ||||| |||| |||  |||| ||||||| |||||||||||||  ||||||||||||||||||||||||||    
T  20157346 gacacgacaccgacacatatgattacactgaattatgtgattttctcacattattagcggtgtcgatgtgtcagt 20157420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 153 - 223
Target Start/End: Original strand, 29163321 - 29163391
Alignment:
Q  153 caatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    ||||||||||||||||||  || |||||| |||||||||||||| | || |||||||||| ||||||||||    
T  29163321 caatgaagcacgaacacttctctgattagccgtgtcccggtgtcaggcacgtgtcgtgtccgacaccgaca 29163391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 173 - 290
Target Start/End: Complemental strand, 38503428 - 38503313
Alignment:
Q  173 tcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaatta 272  Q
    |||||||||  ||||||| | ||| |||||||||| |||| |||  ||||| ||||| |||| ||| ||||| ||||||  || |||||||||| |||||    
T  38503428 tcggattaggtgtgtccctgcgtcagacatgtgtcatgtccgac--cgacaggacaccgacacatataattacactgaaatatatgattttctcaaatta 38503331  T
Q  273 ttagcggtgtcgatgtgt 290  Q
    |||||||||||| |||||    
T  38503330 ttagcggtgtcggtgtgt 38503313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 275
Target Start/End: Original strand, 16164257 - 16164366
Alignment:
Q  166 acactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttct 265  Q
    |||||||||||||||| ||||||| ||||||||||| |||| | |||  ||||| ||| |||| ||||| ||| ||||| | | ||| |||||||||| |    
T  16164257 acactcttcggattaggcgtgtcctggtgtcggacacgtgttgcgtccaacaccaacacgacaatgacacatataattacattaaattatgtgatttttt 16164356  T
Q  266 cgaattatta 275  Q
    | ||||||||    
T  16164357 caaattatta 16164366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 154 - 223
Target Start/End: Original strand, 42359390 - 42359459
Alignment:
Q  154 aatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    ||||||||||| |||||| ||||||||| |||||||||||||||||||   ||| |||| ||||||||||    
T  42359390 aatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacacgtcttgtccgacaccgaca 42359459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 221
Target Start/End: Complemental strand, 52284809 - 52284764
Alignment:
Q  176 gattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccga 221  Q
    |||||||||||||  |||||||||||||||||||||||||||||||    
T  52284809 gattagacgtgtcttggtgtcggacatgtgtcgtgtctgacaccga 52284764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 155 - 207
Target Start/End: Original strand, 9690215 - 9690267
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtc 207  Q
    ||||||||| |||||||| |||||||| ||||||||||||||||||| |||||    
T  9690215 atgaagcacaaacactctccggattaggcgtgtcccggtgtcggacacgtgtc 9690267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 186 - 284
Target Start/End: Original strand, 26238078 - 26238172
Alignment:
Q  186 gtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcg 284  Q
    ||||||| |||||||| |||| ||||| ||||||||||   |||||||| ||| | ||| ||||||| |||| |||||||| |||||||||||||||||    
T  26238078 gtcccggagtcggacacgtgttgtgtccgacaccgaca---cactgacacatata-ttacactgaattatgttattttctcaaattattagcggtgtcg 26238172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 46348325 - 46348393
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    |||||||||| |||| | |||||| || |||||| |||||||||||| |||||||||| ||||||||||    
T  46348325 atgaagcacggacacacctcggatcaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgaca 46348393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 51410142 - 51410074
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    |||||||||||| |||| | ||||||| |||||| |||||||||| | |||||||||| ||||||||||    
T  51410142 atgaagcacgaatactccttggattaggcgtgtctcggtgtcggatacgtgtcgtgtccgacaccgaca 51410074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 295
Target Start/End: Complemental strand, 34298479 - 34298424
Alignment:
Q  240 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtt 295  Q
    ||||| ||||||| ||||||||||||| ||||||||| ||||||| ||||||||||    
T  34298479 aattacactgaattatgtgattttctcaaattattagtggtgtcggtgtgtcagtt 34298424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 294
Target Start/End: Original strand, 2896121 - 2896191
Alignment:
Q  224 tgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagt 294  Q
    |||||| |||||||| |  || ||||||| ||||||||||||| |||||||||||||||||  ||||||||    
T  2896121 tgacaccgacatatatagctacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagt 2896191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 229
Target Start/End: Original strand, 18556387 - 18556461
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacac 229  Q
    |||||||||| |||||  ||||||||| |||||||| |||||||| | |||||| ||||||||||| || |||||    
T  18556387 atgaagcacggacacttctcggattaggcgtgtcccagtgtcggatacgtgtcgggtctgacaccgtcacgacac 18556461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 197
Target Start/End: Original strand, 22881569 - 22881611
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcg 197  Q
    |||||||||| |||||| |||||||||||||||||||||||||    
T  22881569 atgaagcacggacactcctcggattagacgtgtcccggtgtcg 22881611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 265
Target Start/End: Complemental strand, 25934744 - 25934634
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    |||||||||| |||||| | |||| || ||| |||| ||||| |||| |||||||||| |||||||||| || || |||| ||| ||||| |||| ||      
T  25934744 atgaagcacggacactccttggataaggcgtatccccgtgtcagacacgtgtcgtgtccgacaccgacacgataccgacacatataattacactgtattt 25934645  T
Q  255 tgtgattttct 265  Q
    |||||||||||    
T  25934644 tgtgattttct 25934634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 201
Target Start/End: Original strand, 29144322 - 29144368
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggaca 201  Q
    |||||||||| |||||||||||||||| ||||| |||||||||||||    
T  29144322 atgaagcacggacactcttcggattaggcgtgttccggtgtcggaca 29144368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 294
Target Start/End: Complemental strand, 36878504 - 36878450
Alignment:
Q  240 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagt 294  Q
    ||||| ||||||| ||||||||||||| |||||||||||||||||  ||||||||    
T  36878504 aattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagt 36878450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 201
Target Start/End: Original strand, 46940750 - 46940796
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggaca 201  Q
    ||||||||||||||||| ||||||||| ||||| |||||||||||||    
T  46940750 atgaagcacgaacactcctcggattaggcgtgttccggtgtcggaca 46940796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 17778670 - 17778617
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcg 208  Q
    ||||||||||||||||  ||||||||| | ||||||||||||||||| ||||||    
T  17778670 atgaagcacgaacacttctcggattaggcatgtcccggtgtcggacacgtgtcg 17778617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 223
Target Start/End: Original strand, 18190061 - 18190118
Alignment:
Q  166 acactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    |||||| |||||||||  |||||||||||||||||| |||| |||||||||| |||||    
T  18190061 acactcctcggattaggtgtgtcccggtgtcggacacgtgttgtgtctgacatcgaca 18190118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 219
Target Start/End: Complemental strand, 34741963 - 34741899
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatg-tgtcgtgtctgacacc 219  Q
    |||||||||| |||||||||||||||| |||||||| |||||||||| | ||||||||| ||||||    
T  34741963 atgaagcacggacactcttcggattaggcgtgtccc-gtgtcggacacgttgtcgtgtcagacacc 34741899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 276
Target Start/End: Original strand, 7918207 - 7918263
Alignment:
Q  220 gacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattag 276  Q
    |||| |||||||||| ||| ||||| ||||||| ||||||||||||| |||||||||    
T  7918207 gacacgacactgacacatataattacactgaattatgtgattttctcaaattattag 7918263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 234
Target Start/End: Complemental strand, 15765875 - 15765795
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtc-gtgtctgacaccgacatgacactgaca 234  Q
    |||||||||| |||||||||||||||| |||||||| ||||| ||||   ||| |  ||||||||||||| ||||||||||    
T  15765875 atgaagcacggacactcttcggattaggcgtgtcccagtgtcagacacacgtcggcatctgacaccgacaagacactgaca 15765795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 219
Target Start/End: Original strand, 16297223 - 16297287
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacacc 219  Q
    |||||||||| |||||| ||||||||| ||||||| |||||||||||   |||||||| ||||||    
T  16297223 atgaagcacggacactcctcggattaggcgtgtcctggtgtcggacacacgtcgtgtccgacacc 16297287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 219
Target Start/End: Complemental strand, 33203020 - 33202956
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacacc 219  Q
    |||||||||  | |||| ||||||||| |||||| |||||||||| |||| ||||||||||||||    
T  33203020 atgaagcacatatactcctcggattaggcgtgtcacggtgtcggatatgtatcgtgtctgacacc 33202956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 205 - 280
Target Start/End: Complemental strand, 21038161 - 21038086
Alignment:
Q  205 gtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggt 280  Q
    |||||||| |||||||||| |||||||||  |||  |||| ||||||| |||| |||||||  |||||||||||||    
T  21038161 gtcgtgtccgacaccgacacgacactgacgcatatgattacactgaattatgtaattttcttaaattattagcggt 21038086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 155 - 294
Target Start/End: Complemental strand, 36906124 - 36905986
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    |||||||||| |||||||| | |||||  ||||||| ||||| |||  | |||||||| ||||| ||||  || |  ||| ||| |||||  |||||| |    
T  36906124 atgaagcacggacactctt-gcattaggtgtgtcccagtgtcagacgcgggtcgtgtccgacactgacacaacgccaacacatataattactctgaatta 36906026  T
Q  255 tgtgattttctcgaattattagcggtgtcgatgtgtcagt 294  Q
    ||||||||||||  |||||||||||||| | |||||||||    
T  36906025 tgtgattttctcagattattagcggtgttggtgtgtcagt 36905986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 294
Target Start/End: Original strand, 398781 - 398835
Alignment:
Q  240 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagt 294  Q
    ||||| ||||||| |||||||||| || |||||||||||||||||  ||||||||    
T  398781 aattacactgaattatgtgattttttcaaattattagcggtgtcggcgtgtcagt 398835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 282
Target Start/End: Complemental strand, 28674851 - 28674801
Alignment:
Q  232 acatataaaattatactgaatcatgtgattttctcgaattattagcggtgt 282  Q
    ||||||| ||||||||||||| |||| |||||||| |||||||| ||||||    
T  28674851 acatatataattatactgaattatgtaattttctcaaattattaacggtgt 28674801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 40181976 - 40181922
Alignment:
Q  167 cactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccga 221  Q
    ||||| ||||||||| ||||||||||||| ||||| |||| ||||| ||||||||    
T  40181976 cactcctcggattaggcgtgtcccggtgtaggacacgtgttgtgtccgacaccga 40181922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 283
Target Start/End: Original strand, 48147967 - 48148097
Alignment:
Q  154 aatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatc 253  Q
    |||||||||| | |||||||  |||||| ||||||||||||||  ||||  |||||||  || | | ||| ||||| |||||||| ||||| |||||||     
T  48147967 aatgaagcacaaccactctttagattaggcgtgtcccggtgtcatacatacgtcgtgttcgatatcaacacgacaccgacatatataattacactgaatt 48148066  T
Q  254 atgtga-ttttctcgaattattagcggtgtc 283  Q
    || ||| |||| |  ||||||||||||||||    
T  48148067 atatgatttttttaaaattattagcggtgtc 48148097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 201
Target Start/End: Complemental strand, 52903363 - 52903317
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggaca 201  Q
    |||||||||| |||||||||| || || |||||||||||||||||||    
T  52903363 atgaagcacggacactcttcgaataagccgtgtcccggtgtcggaca 52903317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 224
Target Start/End: Original strand, 2896083 - 2896132
Alignment:
Q  175 ggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacat 224  Q
    |||||||  |||||||||| |||||||  |||||||||||||||||||||    
T  2896083 ggattaggtgtgtcccggtctcggacacatgtcgtgtctgacaccgacat 2896132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 275
Target Start/End: Original strand, 6612113 - 6612222
Alignment:
Q  166 acactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttct 265  Q
    |||||| | ||||||| ||||||| |||||||||||  | ||||||| |||| ||||| ||||| ||||  |  ||||| ||||||| |||| ||||| |    
T  6612113 acactccttggattaggcgtgtcctggtgtcggacacatatcgtgtccgacatcgacacgacaccgacacttgtaattacactgaattatgtaatttttt 6612212  T
Q  266 cgaattatta 275  Q
    | ||||||||    
T  6612213 caaattatta 6612222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 212
Target Start/End: Complemental strand, 12919062 - 12919005
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtc 212  Q
    ||||||||||||||||  |||||| || |||||||| ||||| |||| ||||||||||    
T  12919062 atgaagcacgaacacttctcggataagccgtgtccccgtgtcagacacgtgtcgtgtc 12919005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 244
Target Start/End: Complemental strand, 17408819 - 17408730
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaatta 244  Q
    |||||||||  ||||||||| ||||||  || ||  ||||||||||| ||||||||||||| ||| |||  |||| |||||||| |||||    
T  17408819 atgaagcacagacactcttcagattaggtgtatcttggtgtcggacacgtgtcgtgtctgataccaacacaacaccgacatatataatta 17408730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 19637890 - 19637817
Alignment:
Q  150 tatcaatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    |||| |||| |||| || |||| |||||||||  | |||||||||||||| |||| ||||||| ||||||||||    
T  19637890 tatctatgatgcacaaatactcctcggattaggggcgtcccggtgtcggatatgtatcgtgtccgacaccgaca 19637817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 224
Target Start/End: Original strand, 27965942 - 27966011
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacat 224  Q
    |||||||| | |||||| ||||||||| |||||||||||||| | || | | |||||||||||| |||||    
T  27965942 atgaagcatggacactcctcggattaggcgtgtcccggtgtcaggcacgaggcgtgtctgacacggacat 27966011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 284
Target Start/End: Complemental strand, 1262927 - 1262883
Alignment:
Q  240 aattatactgaatcatgtgattttctcgaattattagcggtgtcg 284  Q
    ||||||| ||||| ||||||||||||| |||||||||| ||||||    
T  1262927 aattatattgaattatgtgattttctcaaattattagctgtgtcg 1262883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 284
Target Start/End: Original strand, 12443476 - 12443520
Alignment:
Q  240 aattatactgaatcatgtgattttctcgaattattagcggtgtcg 284  Q
    ||||| ||||||| ||||||||||||| |||||||||| ||||||    
T  12443476 aattacactgaattatgtgattttctcaaattattagctgtgtcg 12443520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 21530778 - 21530738
Alignment:
Q  183 cgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    |||||||  ||||||||||||||||||||| ||||||||||    
T  21530778 cgtgtcctagtgtcggacatgtgtcgtgtccgacaccgaca 21530738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 284
Target Start/End: Original strand, 25098571 - 25098615
Alignment:
Q  240 aattatactgaatcatgtgattttctcgaattattagcggtgtcg 284  Q
    ||||| ||||||| ||||||||||||| |||||| ||||||||||    
T  25098571 aattacactgaattatgtgattttctcaaattatcagcggtgtcg 25098615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 218
Target Start/End: Complemental strand, 26830701 - 26830641
Alignment:
Q  158 aagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacac 218  Q
    ||||||| |||||| || |||||| ||||||||||| ||| ||| |||| |||||||||||    
T  26830701 aagcacggacactcctctgattaggcgtgtcccggtatcgaacacgtgtagtgtctgacac 26830641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 294
Target Start/End: Original strand, 40285676 - 40285724
Alignment:
Q  246 actgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagt 294  Q
    ||||||| ||| ||||||||| ||||||||||||||| | |||||||||    
T  40285676 actgaattatgcgattttctcaaattattagcggtgttggtgtgtcagt 40285724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 80; Significance: 2e-37; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 155 - 294
Target Start/End: Complemental strand, 32308248 - 32308109
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    |||||||| |||||||| |||||||||  ||||| |||||||||||||||||||||||  ||||||||| |||||||||| ||| ||||| ||||||| |    
T  32308248 atgaagcatgaacactcctcggattagctgtgtctcggtgtcggacatgtgtcgtgtccaacaccgacacgacactgacacatacaattacactgaatta 32308149  T
Q  255 tgtgattttctcgaattattagcggtgtcgatgtgtcagt 294  Q
    |||||||||||| |||||||||||||||||  ||||||||    
T  32308148 tgtgattttctcaaattattagcggtgtcggcgtgtcagt 32308109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 155 - 284
Target Start/End: Complemental strand, 24339770 - 24339641
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    ||||||||||  ||||| ||||||||| ||||||||||||||||| | |||||||||| |||||||||| ||||| ||||  |  ||||| ||||||| |    
T  24339770 atgaagcacgggcactcctcggattaggcgtgtcccggtgtcggatacgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaatta 24339671  T
Q  255 tgtgattttctcgaattattagcggtgtcg 284  Q
    ||||||||| || |||||||||| ||||||    
T  24339670 tgtgattttttcaaattattagctgtgtcg 24339641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 598325 - 598257
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    |||||||||| |||||  ||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  598325 atgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 598257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 176 - 284
Target Start/End: Complemental strand, 19206157 - 19206049
Alignment:
Q  176 gattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattatta 275  Q
    |||||| ||| | |||||||| || ||||||| | ||||||||| ||| ||||| |||| ||| ||||||| ||||| ||||||||||||| ||||||||    
T  19206157 gattagccgtattccggtgtcagatatgtgtcatctctgacaccaacaagacaccgacacatataattataatgaattatgtgattttctcaaattatta 19206058  T
Q  276 gcggtgtcg 284  Q
    |||||||||    
T  19206057 gcggtgtcg 19206049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 218
Target Start/End: Original strand, 43027406 - 43027469
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacac 218  Q
    |||||||||| |||||| ||||||||| ||||||||||||||||||| ||||||||||||||||    
T  43027406 atgaagcacggacactcatcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacac 43027469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 155 - 284
Target Start/End: Complemental strand, 7438834 - 7438705
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    |||||||||| |||||| | | ||||| |||||||  |||||| ||||||||||||| ||||||||||||||||| ||||  |  ||||| | ||||| |    
T  7438834 atgaagcacggacactccttgaattaggcgtgtcctagtgtcgcacatgtgtcgtgtttgacaccgacatgacaccgacacttgtaattacattgaatta 7438735  T
Q  255 tgtgattttctcgaattattagcggtgtcg 284  Q
    ||||||||| || |||||||| | ||||||    
T  7438734 tgtgattttttcaaattattaactgtgtcg 7438705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 155 - 276
Target Start/End: Original strand, 11665371 - 11665492
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    |||||||||| ||| || ||| |||||| ||||  |||||||||||| |||||||||  |||||||||||||||  ||||  || ||||| ||||||| |    
T  11665371 atgaagcacggacattcctcgtattagatgtgtttcggtgtcggacacgtgtcgtgttcgacaccgacatgacatcgacacttataattagactgaatta 11665470  T
Q  255 tgtgattttctcgaattattag 276  Q
    ||||||||| || |||||||||    
T  11665471 tgtgattttttcaaattattag 11665492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 152 - 277
Target Start/End: Original strand, 26033389 - 26033514
Alignment:
Q  152 tcaatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaa 251  Q
    |||||||| |||| |||||| |||||||||  ||||| |||| ||||||| ||||| ||||||||||||||| || || ||||  |  ||||| ||||||    
T  26033389 tcaatgaaacacggacactcctcggattaggtgtgtcgcggtatcggacacgtgtcatgtctgacaccgacacgagaccgacacttgtaattacactgaa 26033488  T
Q  252 tcatgtgattttctcgaattattagc 277  Q
    | |||||||||| || ||||||||||    
T  26033489 ttatgtgattttttcaaattattagc 26033514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 15680926 - 15680858
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    |||||||||| |||||| ||| |||||||||||| |||||||||||| |||||||||| ||||||||||    
T  15680926 atgaagcacggacactcctcgaattagacgtgtctcggtgtcggacacgtgtcgtgtccgacaccgaca 15680858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 21880269 - 21880201
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    |||||||||| |||||  ||||||||| ||||||| |||||||||||||||||||||| ||||||||||    
T  21880269 atgaagcacggacacttctcggattaggcgtgtcctggtgtcggacatgtgtcgtgtccgacaccgaca 21880201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 33994329 - 33994261
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    ||||| ||||||||||| | ||||||| |||||| |||||| |||||||||||||||||||||||||||    
T  33994329 atgaaacacgaacactccttggattaggcgtgtctcggtgttggacatgtgtcgtgtctgacaccgaca 33994261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 155 - 218
Target Start/End: Original strand, 5409773 - 5409836
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacac 218  Q
    |||||||||| |||||| ||||||||| ||||||||||||||||||| |||||||||| |||||    
T  5409773 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacac 5409836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 155 - 230
Target Start/End: Complemental strand, 21831903 - 21831828
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacact 230  Q
    |||||||| ||||||||||  |||||||| |||| || ||||| ||||||||||||| ||||||||||||||||||    
T  21831903 atgaagcatgaacactcttaagattagacttgtctcgatgtcgcacatgtgtcgtgtttgacaccgacatgacact 21831828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 284
Target Start/End: Complemental strand, 1433576 - 1433453
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    |||||||||| |||||| ||||||||||||||||| |||||||||||  |||| |||      |||||| ||||| |||| ||| ||||| ||  ||| |    
T  1433576 atgaagcacggacactcctcggattagacgtgtcctggtgtcggacacatgtcttgt------ccgacacgacaccgacacatataattacaccaaatga 1433483  T
Q  255 tgtgattttctcgaattattagcggtgtcg 284  Q
    |||||||||||| |||||||| ||||||||    
T  1433482 tgtgattttctcaaattattaacggtgtcg 1433453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 154 - 294
Target Start/End: Original strand, 9408264 - 9408404
Alignment:
Q  154 aatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatc 253  Q
    ||||||||||| ||| |||||||||||| |||||   ||||||||| || | |||||||||||||||| | ||||| ||||  |  ||||| ||| |||     
T  9408264 aatgaagcacggacattcttcggattaggcgtgttttggtgtcggatatatatcgtgtctgacaccgatacgacaccgacacttgtaattacactaaatt 9408363  T
Q  254 atgtgattttctcgaattattagcggtgtcgatgtgtcagt 294  Q
    |||||||||| || ||||||||   |||||| |||||||||    
T  9408364 atgtgattttttcaaattattaattgtgtcggtgtgtcagt 9408404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 294
Target Start/End: Complemental strand, 20549908 - 20549780
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    ||||||||||  ||||| ||||||||| |||||| |  |||||||||||||| ||||| ||||||||||         |||||||  ||| ||||||| |    
T  20549908 atgaagcacgggcactcctcggattaggcgtgtctcattgtcggacatgtgttgtgtccgacaccgaca---------catataa--ttacactgaatta 20549820  T
Q  255 tgtgattttctcgaattattagcggtgtcgatgtgtcagt 294  Q
     ||||||||||| ||||||||||||||||| |||||||||    
T  20549819 cgtgattttctcaaattattagcggtgtcggtgtgtcagt 20549780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 21864925 - 21864857
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    |||||||||  |||||| ||| ||||||||||||||||||||||||| |||||||||| |||| |||||    
T  21864925 atgaagcacagacactcctcgaattagacgtgtcccggtgtcggacacgtgtcgtgtccgacagcgaca 21864857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 218
Target Start/End: Original strand, 32093956 - 32094020
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgt-cccggtgtcggacatgtgtcgtgtctgacac 218  Q
    ||||||||||||||||| ||||||||| ||||| |||||||||||||| |||||||||| |||||    
T  32093956 atgaagcacgaacactcctcggattaggcgtgtccccggtgtcggacacgtgtcgtgtccgacac 32094020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 196 - 294
Target Start/End: Original strand, 26329354 - 26329452
Alignment:
Q  196 cggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagt 294  Q
    |||||| ||||||||||||||||||||| ||| | |||| ||| ||||| |||||||  |||| ||||||| |||||||| || |||||  ||||||||    
T  26329354 cggacacgtgtcgtgtctgacaccgacacgacgccgacacatataattacactgaattgtgtgtttttctcaaattattaacgatgtcggcgtgtcagt 26329452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 283
Target Start/End: Complemental strand, 9778622 - 9778500
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    |||||||||| |||||| | ||||||| ||||||||||||||||||| |||| ||||      |||||| ||||| ||||  |  ||||||||||||| |    
T  9778622 atgaagcacggacactccttggattaggcgtgtcccggtgtcggacacgtgttgtgt------ccgacacgacaccgacacttgtaattatactgaatta 9778529  T
Q  255 tgtgattttctcgaattattagcggtgtc 283  Q
    ||||||||| || |||||| ||| |||||    
T  9778528 tgtgattttttcaaattatcagctgtgtc 9778500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 155 - 263
Target Start/End: Complemental strand, 2334377 - 2334270
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    ||||| |||| |||||| |||||||||||||||  | ||||||||||||||||||||| |||| ||||| ||||| ||||  |  ||||| ||| ||| |    
T  2334377 atgaaacacggacactcctcggattagacgtgtttcagtgtcggacatgtgtcgtgtccgaca-cgacacgacaccgacacttgtaattacactaaatta 2334279  T
Q  255 tgtgatttt 263  Q
    |||||||||    
T  2334278 tgtgatttt 2334270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 158 - 218
Target Start/End: Complemental strand, 13770810 - 13770750
Alignment:
Q  158 aagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacac 218  Q
    ||||||| |||||||||||||||| ||||| ||||||||||||| |||| ||||| |||||    
T  13770810 aagcacggacactcttcggattaggcgtgttccggtgtcggacacgtgttgtgtccgacac 13770750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 22484142 - 22484074
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    |||||||||| |||||  |||||| |||| |||| || ||||||||||||||| |||||||||||||||    
T  22484142 atgaagcacggacacttctcggatcagacatgtctcgatgtcggacatgtgtcatgtctgacaccgaca 22484074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 32287405 - 32287473
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    |||||||||| |||||| |||||||||  ||||||||||||||||||  |||| |||| ||||||||||    
T  32287405 atgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacttgtcatgtccgacaccgaca 32287473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 7973087 - 7973134
Alignment:
Q  177 attagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacat 224  Q
    ||||||||||||||| ||||||||||||||||||||| ||||| ||||    
T  7973087 attagacgtgtcccgatgtcggacatgtgtcgtgtctcacaccaacat 7973134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 209
Target Start/End: Complemental strand, 10043041 - 10043007
Alignment:
Q  175 ggattagacgtgtcccggtgtcggacatgtgtcgt 209  Q
    |||||||||||||||||||||||||||||||||||    
T  10043041 ggattagacgtgtcccggtgtcggacatgtgtcgt 10043007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 294
Target Start/End: Complemental strand, 26733347 - 26733293
Alignment:
Q  240 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagt 294  Q
    ||||| ||||||| |||||||||| || |||||||||||||||||| ||||||||    
T  26733347 aattagactgaattatgtgattttgtcaaattattagcggtgtcgacgtgtcagt 26733293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 207
Target Start/End: Original strand, 40287306 - 40287356
Alignment:
Q  157 gaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtc 207  Q
    |||||||| |||||| ||||||||| | |||||||||||||||||||||||    
T  40287306 gaagcacggacactcctcggattaggcatgtcccggtgtcggacatgtgtc 40287356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 224
Target Start/End: Original strand, 3554448 - 3554517
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacat 224  Q
    |||||||||  |||||||||| |||||||||||| | ||||  || |||||||||||| |||||||||||    
T  3554448 atgaagcacagacactcttcgaattagacgtgtctcagtgttagatatgtgtcgtgtccgacaccgacat 3554517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 220
Target Start/End: Complemental strand, 8234243 - 8234198
Alignment:
Q  175 ggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccg 220  Q
    ||||||| |||||| ||||||||||||||||||||||| |||||||    
T  8234243 ggattaggcgtgtctcggtgtcggacatgtgtcgtgtccgacaccg 8234198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 276
Target Start/End: Complemental strand, 9933364 - 9933282
Alignment:
Q  192 gtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattag 276  Q
    ||||| ||||||||||||||| |||||||||| |||||||||| ||  || | |||||||  |||||||||| || |||||||||    
T  9933364 gtgtcagacatgtgtcgtgtccgacaccgacacgacactgacacat--aagtttactgaaatatgtgattttttcaaattattag 9933282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 284
Target Start/End: Complemental strand, 15902922 - 15902821
Alignment:
Q  183 cgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgt 282  Q
    ||||||| ||| |||| ||||||||||||| || |||||||  |||| |||| ||| ||||| ||| ||| |||||||||| || ||||||||  |||||    
T  15902922 cgtgtcctggtctcgggcatgtgtcgtgtccgataccgacacaacaccgacacatataattacactaaattatgtgattttatcaaattattattggtgt 15902823  T
Q  283 cg 284  Q
    ||    
T  15902822 cg 15902821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 226 - 291
Target Start/End: Complemental strand, 17851488 - 17851423
Alignment:
Q  226 acactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtc 291  Q
    |||| |||| ||| ||||| ||||||| ||||||||||||  ||||||||||||| ||||||||||    
T  17851488 acacagacacatataattacactgaattatgtgattttctaaaattattagcggtatcgatgtgtc 17851423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 211
Target Start/End: Original strand, 20545186 - 20545242
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgt 211  Q
    |||||||||  |||||| ||| |||| ||||||||| ||||||||||||||||||||    
T  20545186 atgaagcacagacactcctcgaattaaacgtgtccccgtgtcggacatgtgtcgtgt 20545242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 284
Target Start/End: Original strand, 29787385 - 29787429
Alignment:
Q  240 aattatactgaatcatgtgattttctcgaattattagcggtgtcg 284  Q
    ||||| ||||||| ||||||||||||| |||||||||||||||||    
T  29787385 aattacactgaattatgtgattttctcaaattattagcggtgtcg 29787429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 166 - 209
Target Start/End: Original strand, 3294257 - 3294300
Alignment:
Q  166 acactcttcggattagacgtgtcccggtgtcggacatgtgtcgt 209  Q
    |||||||||||||||| ||||||||||||| ||||| |||||||    
T  3294257 acactcttcggattaggcgtgtcccggtgttggacacgtgtcgt 3294300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 294
Target Start/End: Complemental strand, 598235 - 598197
Alignment:
Q  256 gtgattttctcgaattattagcggtgtcgatgtgtcagt 294  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  598235 gtgattttcttaaattattagcggtgtcgatgtgtcagt 598197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 218
Target Start/End: Original strand, 2533761 - 2533823
Alignment:
Q  156 tgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacac 218  Q
    |||||||||||||||| ||||||||  |||||||||| |||||| | |||| |||||| ||||    
T  2533761 tgaagcacgaacactcctcggattacgcgtgtcccggcgtcggatacgtgttgtgtcttacac 2533823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 201
Target Start/End: Complemental strand, 6490833 - 6490787
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggaca 201  Q
    |||||||||| |||||| ||||||||  |||||||||||||||||||    
T  6490833 atgaagcacggacactcctcggattaagcgtgtcccggtgtcggaca 6490787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 201
Target Start/End: Complemental strand, 10359716 - 10359670
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggaca 201  Q
    |||||||||| ||||  ||||||||||||||||| ||||||||||||    
T  10359716 atgaagcacggacacctttcggattagacgtgtctcggtgtcggaca 10359670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 294
Target Start/End: Complemental strand, 22868097 - 22868031
Alignment:
Q  228 actgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagt 294  Q
    ||||||| ||| ||||| ||||||| |||||||||||||  |||||||| |||||||  ||||||||    
T  22868097 actgacacatataattacactgaattatgtgattttctcatattattagtggtgtcggcgtgtcagt 22868031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 201
Target Start/End: Complemental strand, 24105795 - 24105749
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggaca 201  Q
    ||||||||| ||||||| |||| |||| |||||||||||||||||||    
T  24105795 atgaagcacaaacactcctcgggttaggcgtgtcccggtgtcggaca 24105749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 201
Target Start/End: Original strand, 40131941 - 40131987
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggaca 201  Q
    |||||||||  |||||| |||||||||||||||||| ||||||||||    
T  40131941 atgaagcacagacactcctcggattagacgtgtccctgtgtcggaca 40131987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 294
Target Start/End: Complemental strand, 9482992 - 9482923
Alignment:
Q  225 gacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagt 294  Q
    ||||| |||| ||| ||||| |||||||  |||||||||||| |||||| |||| ||||| |||||||||    
T  9482992 gacaccgacacatataattacactgaattgtgtgattttctcaaattatcagcgatgtcggtgtgtcagt 9482923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 294
Target Start/End: Original strand, 42720891 - 42720960
Alignment:
Q  225 gacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagt 294  Q
    |||||||||| ||| ||||| | | ||| |||||||||| || |||||||||||||||| | ||||||||    
T  42720891 gacactgacacatataattacatttaattatgtgattttttcaaattattagcggtgtcaacgtgtcagt 42720960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 277
Target Start/End: Complemental strand, 3721151 - 3721099
Alignment:
Q  225 gacactgacatataaaattatactgaatcatgtgattttctcgaattattagc 277  Q
    ||||| |||| ||| ||||||||| ||| ||||||||||||| ||||||||||    
T  3721151 gacaccgacacatataattatactaaattatgtgattttctcaaattattagc 3721099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 223
Target Start/End: Original strand, 7197271 - 7197307
Alignment:
Q  187 tcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    |||||||||||||||||||| ||||| ||||||||||    
T  7197271 tcccggtgtcggacatgtgttgtgtccgacaccgaca 7197307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 284
Target Start/End: Original strand, 8842318 - 8842395
Alignment:
Q  203 gtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcg 284  Q
    ||||||||||  ||||||||| |||||||||| |||    || || |||||||||||||||||| |||| ||||| ||||||    
T  8842318 gtgtcgtgtccaacaccgacaagacactgacacata----tacacagaatcatgtgattttctcaaattcttagcagtgtcg 8842395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 207
Target Start/End: Original strand, 18035807 - 18035858
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtc 207  Q
    |||||||||| |||||| ||||||||||||||| || ||||| ||||||||||    
T  18035807 atgaagcacggacactcctcggattagacgtgttcc-gtgtcagacatgtgtc 18035858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 284
Target Start/End: Complemental strand, 23191939 - 23191895
Alignment:
Q  240 aattatactgaatcatgtgattttctcgaattattagcggtgtcg 284  Q
    ||||| ||||||  ||||||||||||| |||||||||||||||||    
T  23191939 aattacactgaaatatgtgattttctcaaattattagcggtgtcg 23191895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 284
Target Start/End: Complemental strand, 30731080 - 30731036
Alignment:
Q  240 aattatactgaatcatgtgattttctcgaattattagcggtgtcg 284  Q
    ||||| ||||||| ||||||||||||| ||||||| |||||||||    
T  30731080 aattacactgaattatgtgattttctcaaattattcgcggtgtcg 30731036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 292
Target Start/End: Original strand, 48246773 - 48246881
Alignment:
Q  184 gtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtc 283  Q
    |||||||  |||||||||||||||||||| ||||  |||||||||| |   |||| ||||| | ||| |  |||||||||||| ||||| || | |||||    
T  48246773 gtgtcccaatgtcggacatgtgtcgtgtccgacattgacatgacaccggtttatataattacattgagttgtgtgattttctcaaattaataacagtgtc 48246872  T
Q  284 gatgtgtca 292  Q
    || ||||||    
T  48246873 gacgtgtca 48246881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 71; Significance: 4e-32; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 155 - 281
Target Start/End: Original strand, 30982809 - 30982935
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    |||||||||| |||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||| ||||  || ||||| ||||||  |    
T  30982809 atgaagcacggacactctttggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacacgacaccgacacttataattacactgaaata 30982908  T
Q  255 tgtgattttctcgaattattagcggtg 281  Q
    |||||||||||| ||| ||||||||||    
T  30982909 tgtgattttctcaaatcattagcggtg 30982935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 155 - 291
Target Start/End: Original strand, 24613632 - 24613768
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    |||||||||| |||||| | ||||||||||||||| |||||| |||| ||||||||||||||||||||||||||| ||||  |  | ||| | ||||| |    
T  24613632 atgaagcacggacactcctaggattagacgtgtcctggtgtcagacacgtgtcgtgtctgacaccgacatgacaccgacacttgtacttacattgaatta 24613731  T
Q  255 tgtgattttctcgaattattagcggtgtcgatgtgtc 291  Q
    |||||||||||| |||||||||  ||||||| |||||    
T  24613732 tgtgattttctcaaattattagttgtgtcgacgtgtc 24613768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 155 - 284
Target Start/End: Original strand, 22234821 - 22234951
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    ||||||||||||||||  |||||||||  |||||| ||||||||||| |||||||||| |||||||||| ||||| |||| ||| ||||| ||||||| |    
T  22234821 atgaagcacgaacacttctcggattagctgtgtcctggtgtcggacacgtgtcgtgtcagacaccgacacgacaccgacacatagaattacactgaatta 22234920  T
Q  255 tgtga-ttttctcgaattattagcggtgtcg 284  Q
    ||||| |||| || |||| ||||||||||||    
T  22234921 tgtgatttttttcaaatttttagcggtgtcg 22234951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 155 - 282
Target Start/End: Complemental strand, 36635447 - 36635325
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    |||||||||| |||||||||||||||| |||||||||||||| |||  ||||||||||||||||     | ||||  ||| ||| ||||| ||||||| |    
T  36635447 atgaagcacggacactcttcggattaggcgtgtcccggtgtctgacgcgtgtcgtgtctgacac-----tcacacgaacacatataattacactgaatta 36635353  T
Q  255 tgtgattttctcgaattattagcggtgt 282  Q
    |||||||||||| ||||||||| |||||    
T  36635352 tgtgattttctcaaattattagtggtgt 36635325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 155 - 292
Target Start/End: Complemental strand, 47264114 - 47263977
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    |||||||||  || ||||||||||||| ||||||| |||||| |||||||||||| ||||||||| ||||||||  ||||| |  ||||| || |||| |    
T  47264114 atgaagcacagacgctcttcggattaggcgtgtcctggtgtcagacatgtgtcgtatctgacaccaacatgacatcgacatttgtaattacacagaatta 47264015  T
Q  255 tgtgattttctcgaattattagcggtgtcgatgtgtca 292  Q
    |||||||||  | ||||||||||  |||||| ||||||    
T  47264014 tgtgatttttacaaattattagctatgtcgacgtgtca 47263977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 23292928 - 23292996
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    |||||||||| |||||| ||||||||| ||||||||||||||||||| |||||||||| ||||||||||    
T  23292928 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgaca 23292996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 175 - 294
Target Start/End: Complemental strand, 904030 - 903911
Alignment:
Q  175 ggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattatt 274  Q
    |||||||| ||||||| ||||||||||  |||||||||  ||||||| | || ||||| | ||| ||||| ||||||| ||||||||||||| |||||||    
T  904030 ggattagatgtgtcccagtgtcggacacatgtcgtgtccaacaccgatacgatactgatacatataattacactgaattatgtgattttctcaaattatt 903931  T
Q  275 agcggtgtcgatgtgtcagt 294  Q
    | ||||| || |||||||||    
T  903930 aacggtgccggtgtgtcagt 903911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 149 - 212
Target Start/End: Complemental strand, 29205591 - 29205528
Alignment:
Q  149 ttatcaatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtc 212  Q
    ||||| ||||||||||||||||| ||||||||| |||||||| |||||||||||||||||||||    
T  29205591 ttatctatgaagcacgaacactcctcggattaggcgtgtcccagtgtcggacatgtgtcgtgtc 29205528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 223
Target Start/End: Original strand, 12797282 - 12797348
Alignment:
Q  157 gaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    |||||||||||| || ||||||||||| |||||||||||| ||||||| ||||||| ||||||||||    
T  12797282 gaagcacgaacattcctcggattagacttgtcccggtgtcagacatgtatcgtgtccgacaccgaca 12797348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 293
Target Start/End: Original strand, 23861371 - 23861500
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    ||||||||||||||||||| | ||||| ||||||  |||| | |||||||||||| ||||||||||||         ||||||| ||||| | |||||||    
T  23861371 atgaagcacgaacactctttgaattaggcgtgtcttggtgacagacatgtgtcgtatctgacaccgac---------acatatataattacattgaatca 23861461  T
Q  255 tgtgattttctcgaattattagcggtgtcgatgtgtcag 293  Q
    ||||||||| || | ||||||||||||||| ||| ||||    
T  23861462 tgtgattttatcaatttattagcggtgtcggtgtttcag 23861500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 211
Target Start/End: Original strand, 715547 - 715603
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgt 211  Q
    |||||||||| |||||| ||||||||| |||||||| ||||||||||||||||||||    
T  715547 atgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgt 715603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 211
Target Start/End: Original strand, 752873 - 752929
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgt 211  Q
    |||||||||| |||||| ||||||||| |||||||| ||||||||||||||||||||    
T  752873 atgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgt 752929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 12895216 - 12895284
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    ||||||||||||||||| ||||||||| ||||||||| ||||||| |  ||||||||| ||||||||||    
T  12895216 atgaagcacgaacactcctcggattaggcgtgtcccgatgtcggatacatgtcgtgtccgacaccgaca 12895284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 263
Target Start/End: Complemental strand, 19312463 - 19312355
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    ||||| |||| |||||  || ||||||||||||| |||||||||||| ||||||| || |||| ||||| ||||| || |  || ||||| |||||||||    
T  19312463 atgaaacacggacacttctcagattagacgtgtctcggtgtcggacacgtgtcgtatccgacaacgacacgacaccgatacttataattacactgaatca 19312364  T
Q  255 tgtgatttt 263  Q
    |||||||||    
T  19312363 tgtgatttt 19312355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 166 - 282
Target Start/End: Original strand, 30522858 - 30522973
Alignment:
Q  166 acactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttct 265  Q
    |||||||| |||||||||||||| ||||||| || ||||||||||| |||| ||||   ||| |  ||||||| | ||| ||||||| ||||||||||||    
T  30522858 acactctttggattagacgtgtctcggtgtcagatatgtgtcgtgtttgacgccgatccgac-ccaacatatatagttacactgaattatgtgattttct 30522956  T
Q  266 cgaattattagcggtgt 282  Q
    | ||| |||||||||||    
T  30522957 caaataattagcggtgt 30522973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 34306746 - 34306814
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    |||||||||||||| || || |||||| |||||| |||||||||||| |||||||||| ||||||||||    
T  34306746 atgaagcacgaacattcctcagattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgaca 34306814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 155 - 218
Target Start/End: Original strand, 14465007 - 14465070
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacac 218  Q
    |||||||||| |||||| || ||||||||||||||| |||||| ||| ||||||||||||||||    
T  14465007 atgaagcacggacactcctcagattagacgtgtcccagtgtcgaacacgtgtcgtgtctgacac 14465070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 155 - 294
Target Start/End: Complemental strand, 19482796 - 19482657
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    ||||||||||||||||| |||||||||  ||||||| |||||||||| ||||||||||  | ||||||| |||||  |||  |  ||||| || |||| |    
T  19482796 atgaagcacgaacactcctcggattaggtgtgtcccagtgtcggacacgtgtcgtgtccaataccgacacgacaccaacacttgtaattacaccgaatta 19482697  T
Q  255 tgtgattttctcgaattattagcggtgtcgatgtgtcagt 294  Q
    |||||| || || |||||||||  ||||||  ||||||||    
T  19482696 tgtgatattttcaaattattagttgtgtcggcgtgtcagt 19482657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 155 - 285
Target Start/End: Original strand, 38148656 - 38148786
Alignment:
Q  155 atgaagcacgaacact-cttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatc 253  Q
    |||||| ||||||||| ||||| || || ||||| || ||||| || | ||||||||||  ||||| ||| ||||  ||||| |||||||| |||||||     
T  38148656 atgaagtacgaacacttcttcgaat-aggcgtgttccagtgtcagatacgtgtcgtgtccaacaccaacacgacatcgacatttaaaattacactgaatt 38148754  T
Q  254 atgtgattttctcgaattattagcggtgtcga 285  Q
    ||||||||||||| || |||||||||||||||    
T  38148755 atgtgattttctcaaactattagcggtgtcga 38148786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 155 - 284
Target Start/End: Original strand, 3947703 - 3947826
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    |||||||||| |||||| |||||||||  |||||| ||||||||||| |||||||||      |||||| ||||||||||  |  ||||| ||||||| |    
T  3947703 atgaagcacggacactcctcggattaggtgtgtcctggtgtcggacacgtgtcgtgt------ccgacacgacactgacacttgtaattacactgaatta 3947796  T
Q  255 tgtgattttctcgaattattagcggtgtcg 284  Q
    || |||||| || |||||||||| ||||||    
T  3947797 tgcgattttttcaaattattagctgtgtcg 3947826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 168 - 290
Target Start/End: Original strand, 5832638 - 5832760
Alignment:
Q  168 actcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcg 267  Q
    |||| ||||||||||||||||   |||||||||  |||||||||||||| | ||||  ||||  ||| | | || |||||| |||||| ||||||||||     
T  5832638 actcatcggattagacgtgtcttagtgtcggactcgtgtcgtgtctgacgcagacactacaccaacacaaataactatactaaatcatatgattttctca 5832737  T
Q  268 aattattagcggtgtcgatgtgt 290  Q
    |||||||||| ||||||| ||||    
T  5832738 aattattagcagtgtcgacgtgt 5832760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 155 - 279
Target Start/End: Complemental strand, 848079 - 847955
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    ||||| |||| |||||| | |||||||  ||||||||||||  |||| || ||||||| |||||| ||| ||||| ||||  |  ||||||| ||||| |    
T  848079 atgaaacacggacactccttggattaggtgtgtcccggtgttcgacacgtttcgtgtccgacaccaacaagacaccgacacttgtaattatagtgaatta 847980  T
Q  255 tgtgattttctcgaattattagcgg 279  Q
    ||| |||||||| ||||||||||||    
T  847979 tgtaattttctcaaattattagcgg 847955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 28964190 - 28964258
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    |||||||| | |||||| ||||||||| |||||||| |||||||| |||||||||||| ||||| ||||    
T  28964190 atgaagcatggacactcctcggattaggcgtgtcccagtgtcggatatgtgtcgtgtccgacacagaca 28964258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 35157927 - 35157995
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    |||||||||| |||||  ||||||||  ||||| ||||||| |||||||||||||||| ||||||||||    
T  35157927 atgaagcacggacacttctcggattaagcgtgttccggtgttggacatgtgtcgtgtcagacaccgaca 35157995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 294
Target Start/End: Complemental strand, 4383447 - 4383357
Alignment:
Q  203 gtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagt 294  Q
    ||||||||| ||||||||||| ||||||||||| |  ||||| ||||||| |||||||||| || |||||||||  || |||| ||||||||    
T  4383447 gtgtcgtgtttgacaccgacacgacactgacatttgtaattacactgaattatgtgatttt-tcaaattattagttgtatcgacgtgtcagt 4383357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 284
Target Start/End: Original strand, 8423719 - 8423778
Alignment:
Q  225 gacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcg 284  Q
    ||||| ||||| || ||||| ||||||| ||||||||||||| |||||||||||||||||    
T  8423719 gacaccgacatttataattacactgaattatgtgattttctcaaattattagcggtgtcg 8423778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 223
Target Start/End: Original strand, 20743210 - 20743277
Alignment:
Q  157 gaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtc-gtgtctgacaccgaca 223  Q
    |||||||| |||||| |||||||||| |||| ||||||||||||| ||||| |||||||||| |||||    
T  20743210 gaagcacggacactcatcggattagatgtgttccggtgtcggacacgtgtcggtgtctgacatcgaca 20743277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 155 - 294
Target Start/End: Original strand, 44081509 - 44081647
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    |||||||||||||||||||| |||||||| |||| | |||||| ||| ||||||||| ||| |  |||| | |||||||| ||| ||||| | | ||| |    
T  44081509 atgaagcacgaacactcttcagattagacatgtctcagtgtcgaacacgtgtcgtgtttgata-tgacacggcactgacacatataattacattaaatta 44081607  T
Q  255 tgtgattttctcgaattattagcggtgtcgatgtgtcagt 294  Q
    | ||||||| || |||||||| || | ||| |||||||||    
T  44081608 tatgattttttcaaattattaacgatatcggtgtgtcagt 44081647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 223
Target Start/End: Complemental strand, 4157268 - 4157198
Alignment:
Q  153 caatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    |||||||||||  |||||| ||| |||||  || || ||||||||||||||||||||||| ||||||||||    
T  4157268 caatgaagcacagacactcctcgaattaggtgtttctcggtgtcggacatgtgtcgtgtccgacaccgaca 4157198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 223
Target Start/End: Complemental strand, 4157555 - 4157485
Alignment:
Q  153 caatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    ||||||||||   |||||| ||| ||||| ||| || ||||||||||||||||||||||| ||||||||||    
T  4157555 caatgaagcatagacactcctcgaattaggcgtttctcggtgtcggacatgtgtcgtgtccgacaccgaca 4157485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 294
Target Start/End: Original strand, 22440616 - 22440670
Alignment:
Q  240 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagt 294  Q
    ||||| ||||||| ||||||||||||| |||||||| |||||||||||| |||||    
T  22440616 aattacactgaattatgtgattttctcaaattattaacggtgtcgatgtatcagt 22440670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 224
Target Start/End: Original strand, 8423660 - 8423729
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacat 224  Q
    |||| ||||| |||||  || |||||| |||||||||||||||||||  ||||||||| |||||||||||    
T  8423660 atgacgcacggacacttctccgattaggcgtgtcccggtgtcggacagctgtcgtgtccgacaccgacat 8423729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 223
Target Start/End: Complemental strand, 21945609 - 21945552
Alignment:
Q  166 acactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    |||||| ||||||||| |||||  |||||||||||||||||| |||| ||||||||||    
T  21945609 acactcctcggattaggcgtgttgcggtgtcggacatgtgtcatgtccgacaccgaca 21945552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 212
Target Start/End: Complemental strand, 35161153 - 35161096
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtc 212  Q
    |||||||||| ||||| ||||||||||  |||| ||||||||||||| ||||||||||    
T  35161153 atgaagcacggacacttttcggattaggtgtgttccggtgtcggacacgtgtcgtgtc 35161096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 294
Target Start/End: Original strand, 35723374 - 35723455
Alignment:
Q  214 gacaccgacatgacactgacatataaaattatactgaatcatgtg-attttctcgaattattagcggtgtcgatgtgtcagt 294  Q
    |||||||| | |||||||||| ||| ||||| | ||||| ||||| |||||||| |||||||||||||||||  ||||||||    
T  35723374 gacaccgatacgacactgacacatataattacattgaattatgtgtattttctcaaattattagcggtgtcggcgtgtcagt 35723455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 37203369 - 37203324
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggac 200  Q
    |||||||||| |||||  ||||||||||||||||||||||||||||    
T  37203369 atgaagcacggacacttctcggattagacgtgtcccggtgtcggac 37203324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 156 - 201
Target Start/End: Original strand, 46715416 - 46715461
Alignment:
Q  156 tgaagcacgaacactcttcggattagacgtgtcccggtgtcggaca 201  Q
    |||||||||||||||| ||||||||||| ||| |||||||||||||    
T  46715416 tgaagcacgaacactcctcggattagacatgtgccggtgtcggaca 46715461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 223
Target Start/End: Complemental strand, 49431132 - 49431075
Alignment:
Q  166 acactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    |||||| |||||| || ||||||||||||| ||||| |||||||||| ||||||||||    
T  49431132 acactcctcggataaggcgtgtcccggtgttggacacgtgtcgtgtccgacaccgaca 49431075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 211
Target Start/End: Original strand, 3064870 - 3064926
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgt 211  Q
    |||||||||| |||||| ||||||||| |||||| | | ||||||||||||||||||    
T  3064870 atgaagcacggacactcctcggattaggcgtgtctcagagtcggacatgtgtcgtgt 3064926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 16073511 - 16073443
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    |||||||| | |||||| ||||||||| ||||||   ||||||||||||| ||||||| ||||||||||    
T  16073511 atgaagcatggacactcctcggattaggcgtgtcttagtgtcggacatgtatcgtgtccgacaccgaca 16073443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 29205533 - 29205493
Alignment:
Q  183 cgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    ||||||||||||||||||||||||||||||  |||||||||    
T  29205533 cgtgtcccggtgtcggacatgtgtcgtgtccaacaccgaca 29205493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 294
Target Start/End: Original strand, 5775353 - 5775427
Alignment:
Q  219 cgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagt 294  Q
    ||||||||||| |||| ||| ||||| ||| ||| ||||||||||||| ||||||||  ||||||| |||||||||    
T  5775353 cgacatgacaccgacacatataattacacttaattatgtgattttctcaaattattaatggtgtcg-tgtgtcagt 5775427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 155 - 210
Target Start/End: Original strand, 7214468 - 7214523
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtg 210  Q
    ||||||||| |||| || ||||||||| | | ||||||||||||||||||||||||    
T  7214468 atgaagcacaaacaatcatcggattaggcatttcccggtgtcggacatgtgtcgtg 7214523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 282
Target Start/End: Original strand, 21658797 - 21658872
Alignment:
Q  207 cgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgt 282  Q
    |||||| ||||| ||||||| || ||||  |||||||||| | ||| ||||||||||||| ||||||||| |||||    
T  21658797 cgtgtccgacactgacatgaaaccgacacttaaaattatagtaaattatgtgattttctcaaattattagtggtgt 21658872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 160 - 207
Target Start/End: Original strand, 21873309 - 21873356
Alignment:
Q  160 gcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtc 207  Q
    |||| ||||||| | ||||||||||||||||||||||||||| |||||    
T  21873309 gcacaaacactccttggattagacgtgtcccggtgtcggacacgtgtc 21873356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 160 - 207
Target Start/End: Original strand, 21929170 - 21929217
Alignment:
Q  160 gcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtc 207  Q
    |||| ||||||| | ||||||||||||||||||||||||||| |||||    
T  21929170 gcacaaacactccttggattagacgtgtcccggtgtcggacacgtgtc 21929217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 155 - 229
Target Start/End: Complemental strand, 24343630 - 24343555
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtc-gtgtctgacaccgacatgacac 229  Q
    |||||||||| |||||| || || ||| ||||||||||||||||||| | ||| ||||| |||||||||| |||||    
T  24343630 atgaagcacggacactcctcagaataggcgtgtcccggtgtcggacacgcgtcggtgtcggacaccgacacgacac 24343555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 265
Target Start/End: Original strand, 5414103 - 5414213
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    |||||||||| |||||| | |||| ||  ||||||| ||||| |||| |||||||||| ||||| |||| ||||| || | ||| ||||| |||| ||      
T  5414103 atgaagcacggacactccttggataaggtgtgtccctgtgtcagacacgtgtcgtgtccgacactgacacgacaccgatacatataattacactgcattt 5414202  T
Q  255 tgtgattttct 265  Q
    |||||||||||    
T  5414203 tgtgattttct 5414213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 284
Target Start/End: Complemental strand, 11931408 - 11931279
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtc-gtgtctgacaccgacatgacactgacatataaaattatactgaatc 253  Q
    |||||||||| ||||||   |||||||  |||||| ||||||||||||| ||| ||||| || ||||||||||||  |||| ||| | ||| ||| |||     
T  11931408 atgaagcacggacactccatggattaggtgtgtcctggtgtcggacatgcgtcggtgtc-gataccgacatgacatcgacacatatatttacactaaatt 11931310  T
Q  254 atgtgattttctcgaattattagcggtgtcg 284  Q
    |||||||||| ||  ||||||| ||||||||    
T  11931309 atgtgattttttcatattattaacggtgtcg 11931279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 201
Target Start/End: Complemental strand, 30094126 - 30094084
Alignment:
Q  159 agcacgaacactcttcggattagacgtgtcccggtgtcggaca 201  Q
    |||||| |||||||||||||||| |||||||||||||| ||||    
T  30094126 agcacggacactcttcggattaggcgtgtcccggtgtccgaca 30094084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 207
Target Start/End: Original strand, 482180 - 482237
Alignment:
Q  150 tatcaatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtc 207  Q
    ||||||||||||| | |||||| ||||||||||||||| | |||||| |||| |||||    
T  482180 tatcaatgaagcatggacactcatcggattagacgtgttcaggtgtcagacacgtgtc 482237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 224
Target Start/End: Original strand, 21345475 - 21345544
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacat 224  Q
    |||||||||  | |||| ||||||||| | ||| ||||||| ||| |||| |||||||||||||||||||    
T  21345475 atgaagcacacatactcctcggattaggcatgtaccggtgttggatatgtatcgtgtctgacaccgacat 21345544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 223
Target Start/End: Original strand, 30103310 - 30103367
Alignment:
Q  166 acactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    |||||| |||||||||| |||||| | |||| ||||| |||||||| |||||||||||    
T  30103310 acactcctcggattagatgtgtcctgatgtcagacatatgtcgtgtttgacaccgaca 30103367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 192
Target Start/End: Complemental strand, 30299046 - 30299009
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccgg 192  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  30299046 atgaagcacggacactcctcggattagacgtgtcccgg 30299009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 192
Target Start/End: Complemental strand, 30327914 - 30327877
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccgg 192  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  30327914 atgaagcacggacactcctcggattagacgtgtcccgg 30327877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 211
Target Start/End: Original strand, 36409469 - 36409502
Alignment:
Q  178 ttagacgtgtcccggtgtcggacatgtgtcgtgt 211  Q
    |||||||||||||||||| |||||||||||||||    
T  36409469 ttagacgtgtcccggtgtaggacatgtgtcgtgt 36409502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 211
Target Start/End: Original strand, 36423635 - 36423668
Alignment:
Q  178 ttagacgtgtcccggtgtcggacatgtgtcgtgt 211  Q
    |||||||||||||||||| |||||||||||||||    
T  36423635 ttagacgtgtcccggtgtaggacatgtgtcgtgt 36423668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 222
Target Start/End: Original strand, 40179596 - 40179645
Alignment:
Q  173 tcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgac 222  Q
    ||||||||| ||||||  ||||||| |||||||||||||| |||||||||    
T  40179596 tcggattaggcgtgtcatggtgtcgaacatgtgtcgtgtccgacaccgac 40179645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 284
Target Start/End: Complemental strand, 40613502 - 40613449
Alignment:
Q  231 gacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcg 284  Q
    |||| ||| ||||| ||||||| ||||||||||||| || ||||||||||||||    
T  40613502 gacacatataattacactgaattatgtgattttctcaaaatattagcggtgtcg 40613449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 53381532 - 53381601
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtc-gtgtctgacaccgaca 223  Q
    |||||||||| |||||| |||||||||  |||||||||||||||| | | ||| ||||| ||||||||||    
T  53381532 atgaagcacggacactcctcggattaggtgtgtcccggtgtcggatacgcgtcagtgtccgacaccgaca 53381601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 284
Target Start/End: Complemental strand, 1747255 - 1747211
Alignment:
Q  240 aattatactgaatcatgtgattttctcgaattattagcggtgtcg 284  Q
    ||||| ||||||| ||||||||||||| | |||||||||||||||    
T  1747255 aattaaactgaattatgtgattttctcaatttattagcggtgtcg 1747211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 207
Target Start/End: Original strand, 12884349 - 12884401
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtc 207  Q
    |||||||||| |||||| |||||||||||||| |||| ||||| ||| |||||    
T  12884349 atgaagcacggacactcctcggattagacgtgccccgatgtcgaacacgtgtc 12884401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 284
Target Start/End: Original strand, 23293002 - 23293046
Alignment:
Q  240 aattatactgaatcatgtgattttctcgaattattagcggtgtcg 284  Q
    ||||||||||||| |||||||||| || |||||||||| ||||||    
T  23293002 aattatactgaattatgtgattttttcaaattattagctgtgtcg 23293046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 294
Target Start/End: Complemental strand, 30838335 - 30838199
Alignment:
Q  158 aagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgt 257  Q
    ||||||| |||||| |||| |||| ||||||  ||||||||||| |||||| ||| ||||| |||| ||||| || |  || ||||| ||| ||| || |    
T  30838335 aagcacggacactcctcgggttaggcgtgtcttggtgtcggacacgtgtcgcgtccgacactgacacgacaccgatacttataattacactaaattatat 30838236  T
Q  258 gattttctcgaattattagcggtgtcgatgtgtcagt 294  Q
     ||||| || |||||||||| || |||| || |||||    
T  30838235 aattttatcaaattattagcagtatcgacgtatcagt 30838199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 68; Significance: 2e-30; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 155 - 294
Target Start/End: Complemental strand, 22652104 - 22651965
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||  ||||||||| |||||||||| ||||| ||||  |  ||||||| ||||| |    
T  22652104 atgaagcacggacactcctcggattagacgtgtcccggtgtcggacacatgtcgtgtccgacaccgacacgacaccgacacttgtaattatattgaatta 22652005  T
Q  255 tgtgattttctcgaattattagcggtgtcgatgtgtcagt 294  Q
    ||||||||| || |||||||||| ||||||  ||||||||    
T  22652004 tgtgattttttcaaattattagctgtgtcggcgtgtcagt 22651965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 155 - 294
Target Start/End: Original strand, 29510235 - 29510374
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    |||||||||| |||||| |||||||||  |||||||||||||||||| | |||||||| ||||||||||  |||| ||||  |  |||||||||||||      
T  29510235 atgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacactacaccgacacttgtaattatactgaattt 29510334  T
Q  255 tgtgattttctcgaattattagcggtgtcgatgtgtcagt 294  Q
    ||||||||| || |||||||||| ||||||  ||||||||    
T  29510335 tgtgattttttcaaattattagctgtgtcggcgtgtcagt 29510374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 155 - 284
Target Start/End: Complemental strand, 11944793 - 11944664
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    ||||||||||||||||| ||||||||| |||||| |||||||||| |  |||||||| ||||| | ||| ||||| |||| ||| ||||| ||||| | |    
T  11944793 atgaagcacgaacactcatcggattaggcgtgtctcggtgtcggatacatgtcgtgtatgacatcaacacgacaccgacacatataattacactgagtta 11944694  T
Q  255 tgtgattttctcgaattattagcggtgtcg 284  Q
    ||||||||| || |||||||| | ||||||    
T  11944693 tgtgattttatcaaattattaacagtgtcg 11944664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 155 - 260
Target Start/End: Complemental strand, 29447572 - 29447467
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    |||||||||| |||||| || |||||||| |||||||||||||||||  |||||||||||||||||||| |||||  ||| ||| ||||| ||| ||| |    
T  29447572 atgaagcacggacactcctccgattagacctgtcccggtgtcggacacatgtcgtgtctgacaccgacacgacaccaacacatataattacacttaatta 29447473  T
Q  255 tgtgat 260  Q
    ||||||    
T  29447472 tgtgat 29447467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 155 - 291
Target Start/End: Complemental strand, 8343444 - 8343308
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    |||||||||  |||||||||||||||| ||||||||||||||||||| |||||||||| |||||    | ||||||||||  |  ||||| ||| ||| |    
T  8343444 atgaagcacagacactcttcggattaggcgtgtcccggtgtcggacacgtgtcgtgtcggacacgtgtacgacactgacacttgtaattacactaaatta 8343345  T
Q  255 tgtgattttctcgaattattagcggtgtcgatgtgtc 291  Q
    ||||||||| || ||||||||||  ||||| ||||||    
T  8343344 tgtgattttttcaaattattagctatgtcggtgtgtc 8343308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 155 - 275
Target Start/End: Complemental strand, 11803387 - 11803267
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    |||||||||| |||||| ||||||||||||||| || |||||||||||||||||| ||  ||||| |||  ||||  ||| ||| ||||| ||||||| |    
T  11803387 atgaagcacggacactcctcggattagacgtgtacctgtgtcggacatgtgtcgtatccaacaccaacacaacaccaacacatataattacactgaatta 11803288  T
Q  255 tgtgattttctcgaattatta 275  Q
    |||||||||||  ||||||||    
T  11803287 tgtgattttcttaaattatta 11803267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 155 - 291
Target Start/End: Original strand, 29447041 - 29447177
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    |||||||||| |||||| | ||||||| ||||||| |||||| ||||  ||||||||| |||||||||||||||| ||||  |  | ||| | ||||| |    
T  29447041 atgaagcacggacactcctaggattaggcgtgtcctggtgtcagacacatgtcgtgtccgacaccgacatgacaccgacacttgtagttacattgaatta 29447140  T
Q  255 tgtgattttctcgaattattagcggtgtcgatgtgtc 291  Q
    |||||||||||| |||||||||  ||||||| |||||    
T  29447141 tgtgattttctcaaattattagttgtgtcgacgtgtc 29447177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 294
Target Start/End: Original strand, 15816060 - 15816199
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    |||||||||| |||||  ||||||||| |||||||||||||||||   |||||||||| |||||| ||| ||||| ||||  || ||||| ||| ||| |    
T  15816060 atgaagcacggacacttctcggattaggcgtgtcccggtgtcggattcgtgtcgtgtccgacaccaacacgacaccgacacttataattacactaaatta 15816159  T
Q  255 tgtgattttctcgaattattagcggtgtcgatgtgtcagt 294  Q
    ||||||||| || |||||||||  ||||||  ||||||||    
T  15816160 tgtgattttttcaaattattagttgtgtcggcgtgtcagt 15816199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 155 - 284
Target Start/End: Original strand, 24362132 - 24362262
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctg-acaccgacatgacactgacatataaaattatactgaatc 253  Q
    |||||||| | |||||||||  |||||||||    ||||| |||||| |||||||||| | ||||||||| |||| ||||| ||| ||||| |||||||     
T  24362132 atgaagcatggacactcttcaaattagacgttattcggtgccggacacgtgtcgtgtccggacaccgacacgacattgacacatataattacactgaatt 24362231  T
Q  254 atgtgattttctcgaattattagcggtgtcg 284  Q
    |||||||| |||| |||||||||||||||||    
T  24362232 atgtgattctctcaaattattagcggtgtcg 24362262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 173 - 223
Target Start/End: Original strand, 44462155 - 44462205
Alignment:
Q  173 tcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  44462155 tcggattagacgtgtcccggtgtcggacatgtatcgtgtctgacaccgaca 44462205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 173 - 223
Target Start/End: Original strand, 44469688 - 44469738
Alignment:
Q  173 tcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  44469688 tcggattagacgtgtcccggtgtcggacatgtatcgtgtctgacaccgaca 44469738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 158 - 283
Target Start/End: Original strand, 12570669 - 12570793
Alignment:
Q  158 aagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgt 257  Q
    ||||||| ||| ||||| |||||| ||||||| ||||||||||| |||| |||||||||||||| |  ||||  ||||||| ||||| ||| ||| |||     
T  12570669 aagcacggacaatcttcagattaggcgtgtcctggtgtcggacacgtgtagtgtctgacaccgata-cacaccaacatatataattacacttaattatgc 12570767  T
Q  258 gattttctcgaattattagcggtgtc 283  Q
    | ||||||  ||||||||||||||||    
T  12570768 gtttttcttaaattattagcggtgtc 12570793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 157 - 223
Target Start/End: Complemental strand, 5813707 - 5813641
Alignment:
Q  157 gaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    |||||||| |||||| ||  ||||| ||||||||||||||||||| |||||||||| ||||||||||    
T  5813707 gaagcacggacactcctccaattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgaca 5813641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 175 - 221
Target Start/End: Complemental strand, 31557093 - 31557047
Alignment:
Q  175 ggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccga 221  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||    
T  31557093 ggattaggcgtgtcctggtgtcggacatgtgtcgtgtctgacaccga 31557047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 283
Target Start/End: Original strand, 12570443 - 12570567
Alignment:
Q  158 aagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgt 257  Q
    ||||||| ||| ||||| |||||| ||||||| ||||||||||| |||| |||||||||||||| |  |||  |||| ||| ||||| ||| ||| ||||    
T  12570443 aagcacggacaatcttcagattaggcgtgtcctggtgtcggacacgtgtagtgtctgacaccgata-cacatcgacacatataattacacttaattatgt 12570541  T
Q  258 gattttctcgaattattagcggtgtc 283  Q
    | ||||||  |||||||||| |||||    
T  12570542 gtttttcttaaattattagcagtgtc 12570567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 159 - 223
Target Start/End: Original strand, 33405330 - 33405394
Alignment:
Q  159 agcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    |||||| |||||| | ||||||| ||||||| |||||| ||||||||||||||| ||||||||||    
T  33405330 agcacggacactcattggattagccgtgtccaggtgtcagacatgtgtcgtgtccgacaccgaca 33405394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 231 - 291
Target Start/End: Complemental strand, 34897137 - 34897077
Alignment:
Q  231 gacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtc 291  Q
    |||| ||| ||||| ||||||| ||||||||||||| |||||||||||||||||| |||||    
T  34897137 gacacatataattacactgaattatgtgattttctcaaattattagcggtgtcgacgtgtc 34897077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 275
Target Start/End: Original strand, 4122182 - 4122300
Alignment:
Q  157 gaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatg 256  Q
    |||||||| |||||||| ||||||||||||| ||||||||  ||| ||||||||| |||||  ||||  |||| |||| ||| ||||| | ||||| ||     
T  4122182 gaagcacggacactctttggattagacgtgttccggtgtccaacacgtgtcgtgtttgacattgacacaacaccgacacatataattacaatgaattata 4122281  T
Q  257 tgattttctcgaattatta 275  Q
    | ||||| || ||||||||    
T  4122282 taattttatctaattatta 4122300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 201
Target Start/End: Complemental strand, 8343084 - 8343038
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggaca 201  Q
    |||||||||  |||||||||||||||| |||||||||||||||||||    
T  8343084 atgaagcacagacactcttcggattaggcgtgtcccggtgtcggaca 8343038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 229
Target Start/End: Original strand, 12402617 - 12402691
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacac 229  Q
    ||||||||||||||||||||  |||| |||||| |||||||||| ||||||| ||||  |||| ||||| |||||    
T  12402617 atgaagcacgaacactcttcaaattatacgtgttccggtgtcgggcatgtgttgtgttcgacatcgacacgacac 12402691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 212
Target Start/End: Original strand, 22943302 - 22943348
Alignment:
Q  166 acactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtc 212  Q
    |||||| ||||||||| ||||||||||||||||||| ||||||||||    
T  22943302 acactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtc 22943348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 265
Target Start/End: Original strand, 26902106 - 26902216
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    |||||||||| |||||| || ||| || |||||||| ||| | |||| |||||||||| |||||  | | ||||| |||| ||| ||||| ||||||| |    
T  26902106 atgaagcacggacactcctcagataaggcgtgtccccgtgccagacacgtgtcgtgtccgacactcatacgacaccgacacatataattacactgaatta 26902205  T
Q  255 tgtgattttct 265  Q
    |||||||||||    
T  26902206 tgtgattttct 26902216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 154 - 223
Target Start/End: Original strand, 926729 - 926798
Alignment:
Q  154 aatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    ||||||||||| |||||| |||||| |  | ||||||||||||||||| |||||| ||| ||||||||||    
T  926729 aatgaagcacggacactcctcggataaagcatgtcccggtgtcggacacgtgtcgcgtccgacaccgaca 926798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 224
Target Start/End: Complemental strand, 14134816 - 14134747
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacat 224  Q
    ||||| |||| |||||| ||| ||||| ||||||| |||| |||||| ||||||||| ||||||||||||    
T  14134816 atgaaacacggacactcctcgaattaggcgtgtcctggtgacggacacgtgtcgtgtttgacaccgacat 14134747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 154 - 223
Target Start/End: Original strand, 20679336 - 20679405
Alignment:
Q  154 aatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    ||||||||| | |||||| |||| | || ||||||||||||||||||| |||| | ||||||||||||||    
T  20679336 aatgaagcatggacactcctcggttaaggcgtgtcccggtgtcggacacgtgttgcgtctgacaccgaca 20679405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 294
Target Start/End: Original strand, 28384967 - 28385064
Alignment:
Q  198 gacatgtgt-cgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagt 294  Q
    ||||||||| |||||||||||| |||||||||| |||| ||| ||||| ||||||| ||| |||||  ||  ||||||| |||||||| | |||||||    
T  28384967 gacatgtgtacgtgtctgacactgacatgacaccgacacatataattacactgaattatgagatttattcatattattaacggtgtcggtatgtcagt 28385064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 3951478 - 3951546
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    |||||||||| | |||| | ||||||| ||||| || ||||| |||| |||||||||||||||||||||    
T  3951478 atgaagcacggaaactccttggattaggcgtgttcccgtgtcagacacgtgtcgtgtctgacaccgaca 3951546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 275
Target Start/End: Original strand, 6065588 - 6065708
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    |||||||||| |||||| | | ||||  ||||| |||||||||||||||||||||||| ||||  |||| || | |||   ||  |||||||||| || |    
T  6065588 atgaagcacggacactccttgaattatgcgtgttccggtgtcggacatgtgtcgtgtccgacattgacacgatattgattcatgtaattatactgtatta 6065687  T
Q  255 tgtgattttctcgaattatta 275  Q
    ||||||||| | |||||||||    
T  6065688 tgtgattttttagaattatta 6065708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 276
Target Start/End: Complemental strand, 14134758 - 14134706
Alignment:
Q  224 tgacactgacatataaaattatactgaatcatgtgattttctcgaattattag 276  Q
    |||||| |||||||| ||||| ||||||| ||||||||||||| |||||||||    
T  14134758 tgacaccgacatatataattacactgaattatgtgattttctcaaattattag 14134706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 234
Target Start/End: Original strand, 27067233 - 27067310
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgaca 234  Q
    |||||||||| |||||| |||||||||||  || |||||||  ||||  ||||||||| |||||||||| ||||||||||    
T  27067233 atgaagcacggacactcctcggattagac--gttccggtgttcgacacatgtcgtgtccgacaccgacacgacactgaca 27067310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 219
Target Start/End: Original strand, 36450696 - 36450760
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacacc 219  Q
    |||||||||  |||||| ||||||||| ||||||| ||||||||||| | |||||||| ||||||    
T  36450696 atgaagcacagacactcctcggattaggcgtgtcctggtgtcggacacgcgtcgtgtccgacacc 36450760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 155 - 294
Target Start/End: Original strand, 4673356 - 4673495
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    |||||||||  |||||| | ||||||| ||||| ||||||||||| ||| |||||||| |||| | ||| |||||||| |  |  ||||| |||||||      
T  4673356 atgaagcacagacactccttggattaggcgtgttccggtgtcggatatgcgtcgtgtccgacatcaacaagacactgatacttgtaattacactgaattt 4673455  T
Q  255 tgtgattttctcgaattattagcggtgtcgatgtgtcagt 294  Q
    | ||||||| || |||||||| | ||||||  ||||||||    
T  4673456 tatgattttttcaaattattatctgtgtcggcgtgtcagt 4673495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 159 - 222
Target Start/End: Complemental strand, 38079112 - 38079049
Alignment:
Q  159 agcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgac 222  Q
    |||||| ||||| ||| ||||| ||||| |||||||||||||||| |||||||| |||| ||||    
T  38079112 agcacggacacttttcagattatacgtggcccggtgtcggacatgcgtcgtgtccgacatcgac 38079049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 223
Target Start/End: Original strand, 126295 - 126357
Alignment:
Q  161 cacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    |||| |||||| ||||||||| ||||||||||| | ||||| |||||||||| ||||| ||||    
T  126295 cacggacactcctcggattagccgtgtcccggtattggacacgtgtcgtgtccgacactgaca 126357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 289
Target Start/End: Complemental strand, 4611614 - 4611528
Alignment:
Q  203 gtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtg 289  Q
    |||||||||| || |||||||   ||| || | ||| ||||| ||||||| |||| |||||||| ||||||||||||||||| ||||    
T  4611614 gtgtcgtgtccgataccgacacagcaccgagacatataattacactgaattatgttattttctcaaattattagcggtgtcggtgtg 4611528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 285
Target Start/End: Complemental strand, 29776109 - 29776034
Alignment:
Q  208 gtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcga 285  Q
    ||||| ||||| ||| | |||| |||||||||  ||||||||||| | ||||||||||| |||||||||| |||||||    
T  29776109 gtgtccgacactgacttaacaccgacatataa--ttatactgaattacgtgattttctcaaattattagcagtgtcga 29776034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 290
Target Start/End: Complemental strand, 36934705 - 36934663
Alignment:
Q  248 tgaatcatgtgattttctcgaattattagcggtgtcgatgtgt 290  Q
    ||||| |||||||||| ||||||||||||||||||||| ||||    
T  36934705 tgaattatgtgattttttcgaattattagcggtgtcgacgtgt 36934663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 201
Target Start/End: Complemental strand, 40064075 - 40064033
Alignment:
Q  159 agcacgaacactcttcggattagacgtgtcccggtgtcggaca 201  Q
    |||||| |||||| |||||||||| ||||||||||||||||||    
T  40064075 agcacggacactcctcggattagatgtgtcccggtgtcggaca 40064033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 17751773 - 17751704
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtc-gtgtctgacaccgaca 223  Q
    ||||||| || |||||| ||||||||| ||||||||||||||||  ||| ||| ||||| ||||||||||    
T  17751773 atgaagcgcggacactcctcggattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgaca 17751704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 17760760 - 17760691
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtc-gtgtctgacaccgaca 223  Q
    ||||||| || |||||| ||||||||| ||||||||||||||||  ||| ||| ||||| ||||||||||    
T  17760760 atgaagcgcggacactcctcggattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgaca 17760691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 283
Target Start/End: Original strand, 18067956 - 18067993
Alignment:
Q  246 actgaatcatgtgattttctcgaattattagcggtgtc 283  Q
    ||||||| ||||||||||||| ||||||||||||||||    
T  18067956 actgaattatgtgattttctcaaattattagcggtgtc 18067993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 212
Target Start/End: Complemental strand, 18407836 - 18407779
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtc 212  Q
    |||||||||| |||||| ||  ||||| |||||||  |||||||||||||||||||||    
T  18407836 atgaagcacggacactcctccaattaggcgtgtcctagtgtcggacatgtgtcgtgtc 18407779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 282
Target Start/End: Original strand, 22197676 - 22197800
Alignment:
Q  158 aagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca-tgacactgacatataaaattatactgaatcatg 256  Q
    ||||||| |||||| || |||||| ||||  ||||||||||||| ||||| |||| |||| ||||| |||||||||||  |  ||||| ||| ||| |||    
T  22197676 aagcacggacactcctcagattaggcgtgatccggtgtcggacacgtgtcatgtccgaca-cgacactgacactgacacttgtaattacactaaattatg 22197774  T
Q  257 tgattttctcgaattattagcggtgt 282  Q
    ||| ||| || |||||||||| ||||    
T  22197775 tgaatttttcaaattattagctgtgt 22197800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 949207 - 949275
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    |||||||||||||| || || ||||||  ||||| |||||||||| ||||||||| || | ||||||||    
T  949207 atgaagcacgaacattcctcagattaggagtgtctcggtgtcggatatgtgtcgtatccggcaccgaca 949275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 277
Target Start/End: Complemental strand, 3025609 - 3025557
Alignment:
Q  225 gacactgacatataaaattatactgaatcatgtgattttctcgaattattagc 277  Q
    ||||||||||  || ||||| ||||||| ||||||||||||| ||||||||||    
T  3025609 gacactgacacctataattacactgaattatgtgattttctcaaattattagc 3025557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 24413501 - 24413569
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    |||||||||| |||||  ||||||||||||||||||| ||| ||||| |  ||||||| ||||| ||||    
T  24413501 atgaagcacggacacttctcggattagacgtgtcccgctgttggacacgcatcgtgtccgacactgaca 24413569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 284
Target Start/End: Original strand, 39954295 - 39954339
Alignment:
Q  240 aattatactgaatcatgtgattttctcgaattattagcggtgtcg 284  Q
    ||||| ||| ||| ||||||||||||| |||||||||||||||||    
T  39954295 aattacactaaattatgtgattttctcaaattattagcggtgtcg 39954339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 201
Target Start/End: Complemental strand, 44067646 - 44067598
Alignment:
Q  153 caatgaagcacgaacactcttcggattagacgtgtcccggtgtcggaca 201  Q
    |||||||||||| |||||| ||| ||||| ||||||| |||||||||||    
T  44067646 caatgaagcacggacactcctcgaattaggcgtgtcctggtgtcggaca 44067598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 155 - 276
Target Start/End: Original strand, 9678 - 9799
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    |||||||||| |||||| |||||||| |||||||||| |||| |||| ||||||||||||||||| ||| ||||| |||| ||| ||||| ||||||| |    
T  9678 atgaagcacggacactcctcggattatacgtgtcccgatgtcagacaagtgtcgtgtctgacaccaacacgacaccgacacatataattacactgaatta 9777  T
Q  255 tgtgattttctcgaattattag 276  Q
     ||||||||||| |||||||||    
T  9778 agtgattttctcaaattattag 9799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 1e-25; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 155 - 282
Target Start/End: Original strand, 8039766 - 8039893
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    |||||||||  | |||||||||||||  |||||||||||||||||||||| || |||| |||||||||| ||||| |||| ||| ||||| ||||||| |    
T  8039766 atgaagcacagatactcttcggattaagcgtgtcccggtgtcggacatgtctcatgtccgacaccgacacgacaccgacacatataattacactgaatta 8039865  T
Q  255 tgtgattttctcgaattattagcggtgt 282  Q
    | | |||||||| |||||||||||||||    
T  8039866 tataattttctcaaattattagcggtgt 8039893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 154 - 294
Target Start/End: Original strand, 4987221 - 4987361
Alignment:
Q  154 aatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatc 253  Q
    ||||||| ||| |||||| ||||||||| ||||||||||||||||||| ||||||||||  ||||||||| | |||  |||  |  ||||| |||||||     
T  4987221 aatgaagtacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacacgtcaccaacacttgtaattacactgaatt 4987320  T
Q  254 atgtgattttctcgaattattagcggtgtcgatgtgtcagt 294  Q
    |||||||||| || |||||||||| ||||||  ||||||||    
T  4987321 atgtgattttttcaaattattagctgtgtcggcgtgtcagt 4987361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 40993277 - 40993345
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    |||||||| | |||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  40993277 atgaagcatggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgaca 40993345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 153 - 292
Target Start/End: Complemental strand, 29508569 - 29508435
Alignment:
Q  153 caatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaat 252  Q
    |||||||||||| |||||  | |||||||||||||||||||||||||| ||||||||||| |||||| ||||      |||| ||| ||||| |||||||    
T  29508569 caatgaagcacggacacttcttggattagacgtgtcccggtgtcggacgtgtgtcgtgtccgacaccaacat-----cgacacatataattacactgaat 29508475  T
Q  253 catgtgattttctcgaattattagcggtgtcgatgtgtca 292  Q
     || ||||||| || ||||||||| ||| ||| |||||||    
T  29508474 tatatgattttttcaaattattagtggtatcggtgtgtca 29508435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 155 - 284
Target Start/End: Original strand, 15796225 - 15796354
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    ||||||||||||||||||| ||||||| ||||| ||||||| ||||| |||| ||||| |||||| ||| ||||| ||||  |  ||||| ||||||| |    
T  15796225 atgaagcacgaacactctttggattaggcgtgttccggtgttggacacgtgttgtgtccgacacctacacgacaccgacaattgtaattacactgaatta 15796324  T
Q  255 tgtgattttctcgaattattagcggtgtcg 284  Q
    | ||||||| || |||||||| | ||||||    
T  15796325 tatgattttttcaaattattaactgtgtcg 15796354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 20503582 - 20503514
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    |||||||||| |||||| ||||||||| |||||||||||||| |||||||||||||||  |||||||||    
T  20503582 atgaagcacggacactcctcggattaggcgtgtcccggtgtcagacatgtgtcgtgtccaacaccgaca 20503514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 55401192 - 55401124
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    |||||||||| |||||| ||||||||| |||||| |||||||||||| |||||||||| ||||||||||    
T  55401192 atgaagcacggacactcctcggattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgaca 55401124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 155 - 282
Target Start/End: Original strand, 17005550 - 17005677
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    ||||||||| ||||||| |||||||||| |||||| |||||| |||| ||||  ||||||||||| |||  |||| ||||  || ||||| ||||||| |    
T  17005550 atgaagcacaaacactcctcggattagaggtgtcctggtgtcagacacgtgttatgtctgacaccaacacaacaccgacacttataattacactgaatta 17005649  T
Q  255 tgtgattttctcgaattattagcggtgt 282  Q
    | ||||||| || ||||||||| |||||    
T  17005650 tatgattttatcaaattattagtggtgt 17005677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 202 - 291
Target Start/End: Original strand, 16192728 - 16192817
Alignment:
Q  202 tgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtc 291  Q
    |||||||||||||||||||||| ||||   ||| ||| ||||| ||||||| |||| |||||||| |||||||| |||||||| ||||||    
T  16192728 tgtgtcgtgtctgacaccgacacgacatcaacacatataattacactgaattatgttattttctcaaattattaacggtgtcggtgtgtc 16192817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 155 - 284
Target Start/End: Original strand, 34185054 - 34185183
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    |||||||||| |||||| ||||||||| |||||||||||||||||||  |||| |||| ||||  |||| ||||| ||||  |  ||||| |||||||      
T  34185054 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacatgtcttgtccgacatggacacgacaccgacacttgtaattacactgaattg 34185153  T
Q  255 tgtgattttctcgaattattagcggtgtcg 284  Q
    ||||||||| |  |||||||||| ||||||    
T  34185154 tgtgattttttgaaattattagccgtgtcg 34185183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 177 - 277
Target Start/End: Complemental strand, 14832205 - 14832105
Alignment:
Q  177 attagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattag 276  Q
    ||||| ||||||||||||||||||| |||||||||| || ||||||| ||||||||||  |  ||||| | ||| | |||||||||| || |||||||||    
T  14832205 attaggcgtgtcccggtgtcggacacgtgtcgtgtccgataccgacacgacactgacacttgtaattacattgagttatgtgattttttcaaattattag 14832106  T
Q  277 c 277  Q
    |    
T  14832105 c 14832105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 294
Target Start/End: Original strand, 2620003 - 2620123
Alignment:
Q  172 ttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaatt 271  Q
    |||||||||| ||||||||| || |||||||||||||||||| |||||| || |||||  ||| ||  | ||| ||| ||| ||||||||||||| |||     
T  2620003 ttcggattaggcgtgtcccgatgccggacatgtgtcgtgtctaacaccgccacgacaccaacacat--agttacacttaattatgtgattttctcaaatg 2620100  T
Q  272 attagcggtgtcgatgtgtcagt 294  Q
    ||||| |||||||  ||||||||    
T  2620101 attagtggtgtcggcgtgtcagt 2620123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 155 - 218
Target Start/End: Complemental strand, 27505368 - 27505305
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacac 218  Q
    |||||||||| |||||| ||||||||| | ||||||||||||||||| |||||||||| |||||    
T  27505368 atgaagcacggacactcctcggattaggcatgtcccggtgtcggacacgtgtcgtgtcagacac 27505305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 159 - 284
Target Start/End: Complemental strand, 25065031 - 25064908
Alignment:
Q  159 agcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtg 258  Q
    ||||||||||||| |||||| |  |||||||||||||| |||| |||||||||| |||||| ||| || ||  ||| ||  ||||| ||| ||| |||||    
T  25065031 agcacgaacactcctcggataaaccgtgtcccggtgtcagacacgtgtcgtgtccgacaccaacacgataccaacacat--aattacactaaattatgtg 25064934  T
Q  259 attttctcgaattattagcggtgtcg 284  Q
    ||||| || ||| |||||||||||||    
T  25064933 attttttcaaatcattagcggtgtcg 25064908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 184 - 294
Target Start/End: Complemental strand, 26290470 - 26290360
Alignment:
Q  184 gtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtc 283  Q
    |||||| ||||||||||||||| ||| || |||||||  | |||||||||| ||| ||||| || |||  ||||||||||||| ||||||||  ||||||    
T  26290470 gtgtcctggtgtcggacatgtgccgtttccgacaccggaacgacactgacacatataattaaaccgaactatgtgattttctcaaattattaatggtgtc 26290371  T
Q  284 gatgtgtcagt 294  Q
    |  ||||||||    
T  26290370 ggcgtgtcagt 26290360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 166 - 276
Target Start/End: Complemental strand, 28812632 - 28812522
Alignment:
Q  166 acactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttct 265  Q
    |||||| ||||||||| ||||||| | |||||||||||| |||||||||||||| ||| ||||| ||||  |  || || ||||||| |||||||||  |    
T  28812632 acactcctcggattaggcgtgtcctgctgtcggacatgtatcgtgtctgacaccaacacgacaccgacacttgtaactacactgaattatgtgatttctt 28812533  T
Q  266 cgaattattag 276  Q
    | |||||||||    
T  28812532 caaattattag 28812522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 155 - 201
Target Start/End: Complemental strand, 40052429 - 40052383
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggaca 201  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||||    
T  40052429 atgaagcacgaacactcctcggattaggcgtgtcccggtgtcggaca 40052383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 284
Target Start/End: Original strand, 49651718 - 49651846
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    |||||||||| |||||  |||||||||  |||||||||||||||| |||||||||||| |   |||||| ||||| ||||  |  ||||| | ||||| |    
T  49651718 atgaagcacggacacttctcggattaggtgtgtcccggtgtcggatatgtgtcgtgtccg-gtccgacacgacaccgacacttgtaattacagtgaatta 49651816  T
Q  255 tgtgattttctcgaattattagcggtgtcg 284  Q
    ||||||||| || |||||||||| ||||||    
T  49651817 tgtgattttttcaaattattagccgtgtcg 49651846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 153 - 201
Target Start/End: Complemental strand, 25775626 - 25775578
Alignment:
Q  153 caatgaagcacgaacactcttcggattagacgtgtcccggtgtcggaca 201  Q
    ||||||||||||||||||| ||||||||| ||||||| |||||||||||    
T  25775626 caatgaagcacgaacactcctcggattaggcgtgtcctggtgtcggaca 25775578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 8789490 - 8789560
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtg--tcgtgtctgacaccgaca 223  Q
    |||||||||| |||||| ||||||||| |||||| ||||||| ||||||||  ||||||| ||||||||||    
T  8789490 atgaagcacggacactcctcggattaggcgtgtctcggtgtccgacatgtgtgtcgtgtccgacaccgaca 8789560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 284
Target Start/End: Original strand, 11313737 - 11313860
Alignment:
Q  166 acactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacac-----cgacatgacactgacatataaaattatactgaatcatgtgat 260  Q
    |||||||| |||||||  ||||||| |||||  ||| ||| ||||||||||||     ||||| |||||| ||| ||| ||||| ||| ||| |||||||    
T  11313737 acactcttaggattaggagtgtcccagtgtcaaacacgtgacgtgtctgacactaacacgacacgacactaacacatataattacactaaattatgtgat 11313836  T
Q  261 tttctcgaattattagcggtgtcg 284  Q
    |||||| |||||||||| ||||||    
T  11313837 tttctcaaattattagcagtgtcg 11313860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 294
Target Start/End: Complemental strand, 1438847 - 1438793
Alignment:
Q  240 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagt 294  Q
    ||||||||||||| ||||||||||||| |||| |||||| ||||| |||||||||    
T  1438847 aattatactgaattatgtgattttctcaaattgttagcgatgtcggtgtgtcagt 1438793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 218
Target Start/End: Complemental strand, 3631796 - 3631738
Alignment:
Q  160 gcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacac 218  Q
    ||||| |||||| ||||| ||| ||||||| |||||||||||||||||||||| |||||    
T  3631796 gcacggacactcctcggactaggcgtgtcctggtgtcggacatgtgtcgtgtccgacac 3631738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 224
Target Start/End: Complemental strand, 8842451 - 8842377
Alignment:
Q  150 tatcaatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacat 224  Q
    |||| |||||||||| |||||| ||||||||| |||||| |  | ||  ||||||||||||||||||||||||||    
T  8842451 tatctatgaagcacggacactcctcggattaggcgtgtctcaatatctaacatgtgtcgtgtctgacaccgacat 8842377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 223
Target Start/End: Complemental strand, 25093617 - 25093551
Alignment:
Q  157 gaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    |||||||||||||||||| ||||||| |||   | ||||||||||||||| ||||| ||||||||||    
T  25093617 gaagcacgaacactcttcagattagaagtgcttcagtgtcggacatgtgttgtgtccgacaccgaca 25093551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 221
Target Start/End: Original strand, 26492147 - 26492213
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccga 221  Q
    ||||||| || ||| || ||||||||||||||||  |||||| ||||||||||||||| ||||||||    
T  26492147 atgaagcgcggacattcctcggattagacgtgtcttggtgtcagacatgtgtcgtgtccgacaccga 26492213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 284
Target Start/End: Complemental strand, 37077487 - 37077357
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtc-gtgtctgacaccgacatgacactgacatataaaattatactgaatc 253  Q
    |||||||||| ||| || | |||||||  ||||||| |||||||||||| ||| ||||  ||||||||||||||| ||||| |||  |||  | |||||     
T  37077487 atgaagcacggacattccttggattaggtgtgtccccgtgtcggacatgcgtccgtgtacgacaccgacatgacaatgacacatatgattccattgaatt 37077388  T
Q  254 atgtgattttctcgaattattagcggtgtcg 284  Q
    |||| || ||||| |||||||| ||||||||    
T  37077387 atgttatattctcaaattattatcggtgtcg 37077357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 290
Target Start/End: Complemental strand, 11666070 - 11665937
Alignment:
Q  157 gaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatg 256  Q
    |||||||| |||||| | | ||||| ||||| ||| | || |||| ||||||||||| ||| | ||| ||||| |||| ||| ||||| ||| |||  ||    
T  11666070 gaagcacggacactccttgaattaggcgtgttccgatatcagacacgtgtcgtgtctaacatcaacacgacaccgacacatataattacactaaattgtg 11665971  T
Q  257 tgattttctcgaattattagcggtgtcgatgtgt 290  Q
    ||||||| || ||||||||||| ||||| |||||    
T  11665970 tgattttatcaaattattagcgttgtcggtgtgt 11665937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 196
Target Start/End: Complemental strand, 34910434 - 34910393
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtc 196  Q
    |||||||||| |||||| ||||||||||||||||||||||||    
T  34910434 atgaagcacggacactcctcggattagacgtgtcccggtgtc 34910393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 218
Target Start/End: Original strand, 5440969 - 5441033
Alignment:
Q  155 atgaagcacgaacactcttcggattagac-gtgtcccggtgtcggacatgtgtcgtgtctgacac 218  Q
    |||||||||| |||||| ||| ||||| | ||||| |||||| ||||||||||||||||||||||    
T  5440969 atgaagcacggacactcctcgaattaggccgtgtctcggtgttggacatgtgtcgtgtctgacac 5441033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 11252093 - 11252025
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    |||||||||  |||||| ||||||||| ||||| ||| || |||||| |||| ||||||||||||||||    
T  11252093 atgaagcacagacactcctcggattaggcgtgttccgatgccggacacgtgttgtgtctgacaccgaca 11252025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 294
Target Start/End: Original strand, 13620786 - 13620834
Alignment:
Q  246 actgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagt 294  Q
    ||||||||||||||||||||| ||||| ||||||||||||  |||||||    
T  13620786 actgaatcatgtgattttctcaaattactagcggtgtcgacatgtcagt 13620834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 211
Target Start/End: Original strand, 15999952 - 16000008
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgt 211  Q
    |||| ||||| |||||| | ||||||| ||||||||||||||||||| |||||||||    
T  15999952 atgatgcacggacactccttggattaggcgtgtcccggtgtcggacacgtgtcgtgt 16000008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 282
Target Start/End: Complemental strand, 1550220 - 1550141
Alignment:
Q  203 gtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgt 282  Q
    ||||||||||  |||| |||| ||||||||||  || ||||| |||||||  ||||||||| || |||||||||||||||    
T  1550220 gtgtcgtgtcgaacactgacacgacactgacacctataattacactgaatagtgtgattttttcaaattattagcggtgt 1550141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 284
Target Start/End: Original strand, 7614416 - 7614475
Alignment:
Q  225 gacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcg 284  Q
    ||||| |||||||| ||||||||||||| ||||||||||||  |||||||| | ||||||    
T  7614416 gacaccgacatatataattatactgaattatgtgattttcttaaattattaactgtgtcg 7614475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 284
Target Start/End: Complemental strand, 7928508 - 7928449
Alignment:
Q  225 gacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcg 284  Q
    ||||| |||| ||| ||||| ||||||| |||||||||| || |||||||||||||||||    
T  7928508 gacaccgacacatataattacactgaattatgtgattttttcaaattattagcggtgtcg 7928449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 166 - 201
Target Start/End: Complemental strand, 21720878 - 21720843
Alignment:
Q  166 acactcttcggattagacgtgtcccggtgtcggaca 201  Q
    |||||| |||||||||||||||||||||||||||||    
T  21720878 acactcatcggattagacgtgtcccggtgtcggaca 21720843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 184 - 223
Target Start/End: Complemental strand, 45451641 - 45451602
Alignment:
Q  184 gtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    ||||| ||||||||||||||||||||||| ||||||||||    
T  45451641 gtgtctcggtgtcggacatgtgtcgtgtccgacaccgaca 45451602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 280
Target Start/End: Original strand, 49505155 - 49505210
Alignment:
Q  225 gacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggt 280  Q
    |||||||||| ||| ||||| ||| ||| ||||||||||||| |||||||||||||    
T  49505155 gacactgacacatataattacactaaattatgtgattttctcaaattattagcggt 49505210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 294
Target Start/End: Complemental strand, 15544736 - 15544682
Alignment:
Q  240 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagt 294  Q
    |||||||| |||| |||||||||| || |||||||||||||||| | ||||||||    
T  15544736 aattatacagaattatgtgattttatcaaattattagcggtgtcaacgtgtcagt 15544682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 201
Target Start/End: Complemental strand, 25074912 - 25074866
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggaca 201  Q
    ||||||||||||||||| |||||||||  ||||||| ||||||||||    
T  25074912 atgaagcacgaacactcctcggattaggtgtgtcccagtgtcggaca 25074866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 219
Target Start/End: Complemental strand, 7171607 - 7171554
Alignment:
Q  166 acactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacacc 219  Q
    |||||| | ||||||| |||||| |||||||||||| |||||||||| ||||||    
T  7171607 acactccttggattaggcgtgtcgcggtgtcggacacgtgtcgtgtccgacacc 7171554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 224
Target Start/End: Complemental strand, 18427066 - 18426997
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacat 224  Q
    ||||| |||| |||||| || ||||||  ||||||||||| |||||| ||||||| || |||||||||||    
T  18427066 atgaaacacggacactcctcagattaggtgtgtcccggtgccggacacgtgtcgtatccgacaccgacat 18426997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 201
Target Start/End: Original strand, 24204980 - 24205029
Alignment:
Q  152 tcaatgaagcacgaacactcttcggattagacgtgtcccggtgtcggaca 201  Q
    ||||||||||||| |||||| ||| ||||| ||||||| |||||||||||    
T  24204980 tcaatgaagcacggacactcctcgaattaggcgtgtcctggtgtcggaca 24205029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 277
Target Start/End: Complemental strand, 28678378 - 28678309
Alignment:
Q  208 gtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagc 277  Q
    |||||||||||| ||| ||||| |||| ||| ||||||||| ||| |||||||||| |  ||||||||||    
T  28678378 gtgtctgacaccaacacgacaccgacacatacaattatactaaattatgtgattttattaaattattagc 28678309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 207
Target Start/End: Original strand, 8101894 - 8101946
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtc 207  Q
    ||||||||||||||||| || |||||||||||| || ||||| |||| |||||    
T  8101894 atgaagcacgaacactcctcagattagacgtgtaccagtgtccgacacgtgtc 8101946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 284
Target Start/End: Complemental strand, 8383300 - 8383256
Alignment:
Q  240 aattatactgaatcatgtgattttctcgaattattagcggtgtcg 284  Q
    ||||| ||||||| || |||||||||| |||||||||||||||||    
T  8383300 aattacactgaattatatgattttctcaaattattagcggtgtcg 8383256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 283
Target Start/End: Original strand, 10690269 - 10690321
Alignment:
Q  231 gacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtc 283  Q
    |||| ||| ||||| ||||||| |||||||||||||  |||||||||||||||    
T  10690269 gacaaatataattacactgaattatgtgattttctcagattattagcggtgtc 10690321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 292
Target Start/End: Original strand, 11493377 - 11493429
Alignment:
Q  240 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtca 292  Q
    ||||| ||||||| |||||||||||||  |||||||| |||||||| ||||||    
T  11493377 aattacactgaattatgtgattttctcacattattagtggtgtcgacgtgtca 11493429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 224
Target Start/End: Original strand, 14338454 - 14338494
Alignment:
Q  184 gtgtcccggtgtcggacatgtgtcgtgtctgacaccgacat 224  Q
    ||||||||||||| || | ||||||||||||||||||||||    
T  14338454 gtgtcccggtgtccgatacgtgtcgtgtctgacaccgacat 14338494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 2e-24; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 155 - 284
Target Start/End: Complemental strand, 3966631 - 3966502
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    |||||||||| |||||| ||||||||||||||||||  ||| |||||  ||| ||||| ||||| |||| ||||| |||| ||| ||||| |||||||      
T  3966631 atgaagcacggacactcctcggattagacgtgtccctctgttggacacatgttgtgtccgacactgacacgacaccgacacatataattacactgaattg 3966532  T
Q  255 tgtgattttctcgaattattagcggtgtcg 284  Q
    |||||||||||| |||||||||||||||||    
T  3966531 tgtgattttctcaaattattagcggtgtcg 3966502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 155 - 284
Target Start/End: Complemental strand, 7677833 - 7677704
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    |||||||||  || ||| ||||||||| ||||||||||||||||||||||| |||||| |||||||||| ||||| ||||  |  ||||  ||||||| |    
T  7677833 atgaagcaccgactctcctcggattaggcgtgtcccggtgtcggacatgtgacgtgtcagacaccgacacgacaccgacacttctaattgcactgaatta 7677734  T
Q  255 tgtgattttctcgaattattagcggtgtcg 284  Q
    ||||||||| || |||||||||| ||||||    
T  7677733 tgtgattttttcaaattattagctgtgtcg 7677704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 155 - 294
Target Start/End: Complemental strand, 21522878 - 21522739
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    |||| ||||| |||||||| ||||||| |||||||||||| |||||| |||||||||| |||||||||| ||||| ||||  |  ||||| ||||||| |    
T  21522878 atgatgcacggacactctttggattaggcgtgtcccggtgccggacacgtgtcgtgtccgacaccgacacgacaccgacaattgtaattacactgaatta 21522779  T
Q  255 tgtgattttctcgaattattagcggtgtcgatgtgtcagt 294  Q
    ||| ||||| |  |||||||||| ||||||  ||||||||    
T  21522778 tgttattttttaaaattattagctgtgtcggcgtgtcagt 21522739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 155 - 294
Target Start/End: Complemental strand, 21533444 - 21533305
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    |||| ||||| |||||||| ||||||| |||||||||||| |||||| |||||||||| |||||||||| ||||| ||||  |  ||||| ||||||| |    
T  21533444 atgatgcacggacactctttggattaggcgtgtcccggtgccggacacgtgtcgtgtccgacaccgacacgacaccgacaattgtaattacactgaatta 21533345  T
Q  255 tgtgattttctcgaattattagcggtgtcgatgtgtcagt 294  Q
    ||| ||||| |  |||||||||| ||||||  ||||||||    
T  21533344 tgttattttttaaaattattagctgtgtcggcgtgtcagt 21533305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 155 - 284
Target Start/End: Original strand, 32766874 - 32767003
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    |||||||||| |||||| || |||||||||| ||| ||||||||||| ||||||| |  |||||||||| |||||  ||| ||| ||||| | |||||      
T  32766874 atgaagcacggacactcctcagattagacgtatcctggtgtcggacacgtgtcgttttcgacaccgacacgacacaaacacatataattacattgaattg 32766973  T
Q  255 tgtgattttctcgaattattagcggtgtcg 284  Q
    || ||||||||| |||||||||||||||||    
T  32766974 tgcgattttctcaaattattagcggtgtcg 32767003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 153 - 284
Target Start/End: Complemental strand, 19579831 - 19579700
Alignment:
Q  153 caatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaat 252  Q
    ||||||| |||| |||||| ||||||||| |||||||||||||  ||||| ||||||||| ||||| |||| ||||| ||||  |  ||||  ||| |||    
T  19579831 caatgaaacacgtacactcctcggattaggcgtgtcccggtgttagacatatgtcgtgtccgacactgacacgacaccgacacttgtaattgcactaaat 19579732  T
Q  253 catgtgattttctcgaattattagcggtgtcg 284  Q
     ||||||||||||| |||||||||| ||||||    
T  19579731 tatgtgattttctcaaattattagctgtgtcg 19579700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 158 - 294
Target Start/End: Original strand, 15410382 - 15410518
Alignment:
Q  158 aagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgt 257  Q
    |||||||||||||| |||| |||||||||||||||||| |||||  |||||| ||  ||| |||||  ||||  ||| |||  |||| |||||||||| |    
T  15410382 aagcacgaacactcctcggcttagacgtgtcccggtgttggacacttgtcgtatcgaacatcgacacaacaccaacacatatgattacactgaatcatat 15410481  T
Q  258 gattttctcgaattattagcggtgtcgatgtgtcagt 294  Q
     |||||||  |||||||||||||||||  ||||||||    
T  15410482 aattttcttaaattattagcggtgtcggcgtgtcagt 15410518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 156 - 284
Target Start/End: Complemental strand, 18592200 - 18592072
Alignment:
Q  156 tgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcat 255  Q
    ||||||||| |||||| ||| ||||| ||||||||| |||| |||| |||| ||||| |||||||||| ||||| | || ||| ||||| | ||||| ||    
T  18592200 tgaagcacggacactcatcgaattagccgtgtcccgatgtcagacacgtgttgtgtccgacaccgacacgacaccggcacatataattacattgaattat 18592101  T
Q  256 gtgattttctcgaattattagcggtgtcg 284  Q
    || |||||||  || ||||||||||||||    
T  18592100 gtaattttcttaaaatattagcggtgtcg 18592072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 155 - 294
Target Start/End: Complemental strand, 30098454 - 30098315
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    |||||||||| ||| || |||||||||  |||||| |||||| |||| |||||||||| ||||| |||  || || ||||| || ||||| | ||||| |    
T  30098454 atgaagcacggacattcctcggattaggtgtgtcctggtgtctgacacgtgtcgtgtccgacactgactcgataccgacatctataattacattgaatta 30098355  T
Q  255 tgtgattttctcgaattattagcggtgtcgatgtgtcagt 294  Q
    |||||||||||| |||||||| |||| |||  ||||||||    
T  30098354 tgtgattttctcaaattattaacggtttcgtcgtgtcagt 30098315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 205 - 282
Target Start/End: Original strand, 12264810 - 12264887
Alignment:
Q  205 gtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgt 282  Q
    ||||| ||||||||||| |||||| ||||| ||| ||||| |||||||||||| |||||||| ||| |||||||||||    
T  12264810 gtcgtatctgacaccgatatgacattgacacatataattacactgaatcatgtaattttctcaaataattagcggtgt 12264887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 166 - 223
Target Start/End: Complemental strand, 15382591 - 15382534
Alignment:
Q  166 acactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||  |||||||||    
T  15382591 acactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccaacaccgaca 15382534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 154 - 223
Target Start/End: Original strand, 21190997 - 21191066
Alignment:
Q  154 aatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    ||||||||||| |||||| ||||||||| |||||||||| |||||||| |||| ||||| ||||||||||    
T  21190997 aatgaagcacggacactcctcggattaggcgtgtcccggagtcggacacgtgttgtgtccgacaccgaca 21191066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 294
Target Start/End: Original strand, 7174954 - 7175089
Alignment:
Q  158 aagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgt 257  Q
    |||||||||||||  ||  ||||| ||||||||  | ||||||| |||| |||| ||||| ||||| ||  |||||| ||| |||||| |  ||| ||||    
T  7174954 aagcacgaacacttctcaaattaggcgtgtccccttatcggacacgtgttgtgt-tgacatcgacacgatgctgacacatataattatgccaaattatgt 7175052  T
Q  258 gattttctcgaattattagcggtgtcgatgtgtcagt 294  Q
    ||||||||| |||||||| ||||||||||||||||||    
T  7175053 gattttctcaaattattaacggtgtcgatgtgtcagt 7175089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 203 - 283
Target Start/End: Complemental strand, 25817575 - 25817495
Alignment:
Q  203 gtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtc 283  Q
    ||||| |||||||||||||||||| ||||||| ||| ||| |||||||||||| ||||||| |  |||||||||| |||||    
T  25817575 gtgtcatgtctgacaccgacatgatactgacacatataatcatactgaatcatatgatttttttaaattattagcagtgtc 25817495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 282
Target Start/End: Original strand, 30502330 - 30502446
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    |||||||||||||| || | ||||||| | |||||| ||||||||||||||||||||| ||||||||||         |||||||  ||| ||||||| |    
T  30502330 atgaagcacgaacaatccttggattaggcatgtcccagtgtcggacatgtgtcgtgtccgacaccgaca---------catataa--ttacactgaatta 30502418  T
Q  255 tgtgattttctcgaattattagcggtgt 282  Q
     ||||||||||| |||||||||||||||    
T  30502419 agtgattttctcaaattattagcggtgt 30502446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 282
Target Start/End: Original strand, 30542673 - 30542789
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    |||||||||||||| || | ||||||| | |||||| ||||||||||||||||||||| ||||||||||         |||||||  ||| ||||||| |    
T  30542673 atgaagcacgaacaatccttggattaggcatgtcccagtgtcggacatgtgtcgtgtccgacaccgaca---------catataa--ttacactgaatta 30542761  T
Q  255 tgtgattttctcgaattattagcggtgt 282  Q
     ||||||||||| |||||||||||||||    
T  30542762 agtgattttctcaaattattagcggtgt 30542789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 155 - 265
Target Start/End: Complemental strand, 21814389 - 21814279
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    |||||||||||||| || | |||| || |||||||| ||| | |||| |||||||||| |||||||||| ||||| |||| ||| ||||| |||| ||      
T  21814389 atgaagcacgaacattccttggataaggcgtgtccccgtgccagacacgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgcattt 21814290  T
Q  255 tgtgattttct 265  Q
    |||||||||||    
T  21814289 tgtgattttct 21814279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 214 - 276
Target Start/End: Original strand, 22423802 - 22423864
Alignment:
Q  214 gacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattag 276  Q
    |||||||||| ||||| |||||||| ||||||| ||||| ||||||||||||| |||||||||    
T  22423802 gacaccgacacgacaccgacatatataattatattgaattatgtgattttctcaaattattag 22423864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 284
Target Start/End: Complemental strand, 11686066 - 11685938
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    |||||||||| |||||| || |||||| |||| |  ||| | ||||| |||||||||| |||||||| | ||||| |||| ||| ||||| ||| ||| |    
T  11686066 atgaagcacggacactcctccgattagccgtgccttggttttggacacgtgtcgtgtccgacaccga-acgacaccgacacatataattacactaaatta 11685968  T
Q  255 tgtgattttctcgaattattagcggtgtcg 284  Q
    || || |||||| |||||||||||||||||    
T  11685967 tgcgactttctcaaattattagcggtgtcg 11685938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 224
Target Start/End: Complemental strand, 17123164 - 17123096
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacat 224  Q
    |||||||||| |||||| ||||||||| ||||||||| |||||||||||| |||||||  ||||||||||    
T  17123164 atgaagcacggacactcctcggattaggcgtgtcccg-tgtcggacatgtttcgtgtccaacaccgacat 17123096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 238 - 294
Target Start/End: Complemental strand, 19438388 - 19438332
Alignment:
Q  238 aaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagt 294  Q
    ||||||| ||||||| ||||||||||||| |||||| |||| |||||||||||||||    
T  19438388 aaaattacactgaattatgtgattttctcaaattatcagcgatgtcgatgtgtcagt 19438332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 28588616 - 28588684
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    |||||||| | |||||||||||||||  ||||||| |||||| || |||||||||||| ||||||||||    
T  28588616 atgaagcatggacactcttcggattaagcgtgtcctggtgtcagatatgtgtcgtgtccgacaccgaca 28588684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 155 - 283
Target Start/End: Original strand, 41091188 - 41091316
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    ||||||||||||||||| || ||||||||||| |  |||||  ||||  ||||| ||| ||||  |||| ||||  |||| ||| ||||| ||||||| |    
T  41091188 atgaagcacgaacactcctcagattagacgtgccttggtgttagacacatgtcgcgtccgacattgacacgacatcgacacatataattacactgaatta 41091287  T
Q  255 tgtgattttctcgaattattagcggtgtc 283  Q
    |||||||||||| ||| |||||| |||||    
T  41091288 tgtgattttctcaaatcattagcagtgtc 41091316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 292
Target Start/End: Complemental strand, 12641780 - 12641665
Alignment:
Q  177 attagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattag 276  Q
    |||||||||||| | |||||| ||| |||| |||||||||||| ||| ||||||||||  |  ||||||||| ||| |||||||||| |  ||||||||     
T  12641780 attagacgtgtctccgtgtcgaacacgtgttgtgtctgacaccaacacgacactgacacgtgcaattatactaaattatgtgatttttttaaattattaa 12641681  T
Q  277 cggtgtcgatgtgtca 292  Q
    |  |||||| ||||||    
T  12641680 ctatgtcgacgtgtca 12641665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 291
Target Start/End: Complemental strand, 12927713 - 12927646
Alignment:
Q  224 tgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtc 291  Q
    ||||||||||||||| ||||| ||| ||| || |||||||||| ||||||||||| ||||| ||||||    
T  12927713 tgacactgacatatataattacactaaattatatgattttctcaaattattagcgatgtcggtgtgtc 12927646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 155 - 273
Target Start/End: Complemental strand, 14873639 - 14873527
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    |||||||||| |||||| ||||||||| ||||||||||||| ||||| |||| | ||      |||||||||||| |||| ||| ||||| ||| ||| |    
T  14873639 atgaagcacggacactcctcggattaggcgtgtcccggtgttggacacgtgttgcgt------ccgacatgacaccgacacatataattacactaaatta 14873546  T
Q  255 tgtgattttctcgaattat 273  Q
    |||| ||||||| ||||||    
T  14873545 tgtgcttttctcaaattat 14873527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 234
Target Start/End: Complemental strand, 21542130 - 21542079
Alignment:
Q  183 cgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgaca 234  Q
    ||||||||||||||||||| |||||||||| |||||||||| ||||| ||||    
T  21542130 cgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacgacaccgaca 21542079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 265
Target Start/End: Complemental strand, 6401626 - 6401516
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    |||||||||| |||||| | |||| || ||| |||| ||||| |||| |||||||||| ||||| |||| ||||| |||| ||| ||||| |||| ||      
T  6401626 atgaagcacggacactccttggataaggcgtatccccgtgtcagacacgtgtcgtgtccgacactgacacgacaccgacacatataattacactgtattt 6401527  T
Q  255 tgtgattttct 265  Q
    |||||||||||    
T  6401526 tgtgattttct 6401516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 212
Target Start/End: Original strand, 21194068 - 21194122
Alignment:
Q  158 aagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtc 212  Q
    ||||||| |||||| ||||||||| |||| ||||||||| |||||||||||||||    
T  21194068 aagcacggacactcctcggattaggcgtgccccggtgtctgacatgtgtcgtgtc 21194122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 201
Target Start/End: Original strand, 21351852 - 21351898
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggaca 201  Q
    |||||||||| |||||||||||||||||||||| || ||||||||||    
T  21351852 atgaagcacggacactcttcggattagacgtgttccagtgtcggaca 21351898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 212
Target Start/End: Original strand, 16304368 - 16304425
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtc 212  Q
    |||||||||| ||| || |||||||||||||||| ||||||||| || ||||||||||    
T  16304368 atgaagcacggacattcctcggattagacgtgtctcggtgtcgggcacgtgtcgtgtc 16304425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 276
Target Start/End: Complemental strand, 40131749 - 40131628
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    ||||| |||| |||||| | ||| ||||||||||||  |||| ||||   ||||||||||||| ||| | ||||| || || || ||||| ||||||| |    
T  40131749 atgaaacacggacactccttggagtagacgtgtcccaatgtcagacacaagtcgtgtctgacatcgatacgacaccgatatttataattaaactgaatta 40131650  T
Q  255 tgtgattttctcgaattattag 276  Q
    ||||||||| || |||||||||    
T  40131649 tgtgattttttcaaattattag 40131628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 153 - 218
Target Start/End: Complemental strand, 43001924 - 43001859
Alignment:
Q  153 caatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacac 218  Q
    |||||||||||| |||||| ||||||||| ||||||| |||||  |||| |||||||||| |||||    
T  43001924 caatgaagcacggacactcctcggattaggcgtgtccaggtgtttgacacgtgtcgtgtccgacac 43001859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 223
Target Start/End: Original strand, 18421778 - 18421851
Alignment:
Q  154 aatgaagcacgaacactcttcggattagacgtgtc----ccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    ||||||||||  |||||| ||||||||||||||||    |||||| ||||||||||||||||| ||| ||||||    
T  18421778 aatgaagcacagacactcctcggattagacgtgtcagtcccggtgccggacatgtgtcgtgtccgacgccgaca 18421851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 42893477 - 42893409
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    |||||||| | |||||| ||  ||||| ||||||| ||||||||||| |||| ||||||||||||||||    
T  42893477 atgaagcatggacactcctcatattaggcgtgtcctggtgtcggacacgtgttgtgtctgacaccgaca 42893409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 6035558 - 6035472
Alignment:
Q  207 cgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagt 294  Q
    |||||||| |||||||| ||||| |||| ||| ||||| ||||||| || | |||| ||| |||||||||||||||||  ||||||||    
T  6035558 cgtgtctgtcaccgacacgacaccgacaaatataattacactgaattatattattt-ctcaaattattagcggtgtcggcgtgtcagt 6035472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 177 - 276
Target Start/End: Complemental strand, 30183655 - 30183556
Alignment:
Q  177 attagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattag 276  Q
    ||||| |||||||| |||||||||| ||||||||||||| ||| ||| ||||| ||||  |  ||||| || |||| ||||||| || || |||||||||    
T  30183655 attaggcgtgtcccagtgtcggacacgtgtcgtgtctgataccaacacgacaccgacacttgtaattaaaccgaataatgtgatattttcaaattattag 30183556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 201
Target Start/End: Complemental strand, 2437028 - 2436982
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggaca 201  Q
    ||||||||||||||||| ||||||||| ||||||  |||||||||||    
T  2437028 atgaagcacgaacactcctcggattaggcgtgtcttggtgtcggaca 2436982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 201
Target Start/End: Original strand, 19820330 - 19820376
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggaca 201  Q
    |||||||||| |||||| || |||||| |||||||||||||||||||    
T  19820330 atgaagcacggacactcctctgattaggcgtgtcccggtgtcggaca 19820376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 294
Target Start/End: Original strand, 21351889 - 21351975
Alignment:
Q  208 gtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagt 294  Q
    ||||| |||||||||||||||| ||||  |  ||||| ||||||| |||||| ||| || |||||||||  |||||| |||||||||    
T  21351889 gtgtcggacaccgacatgacaccgacacttgtaattacactgaattatgtgactttttccaattattagttgtgtcggtgtgtcagt 21351975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 223
Target Start/End: Original strand, 30098982 - 30099048
Alignment:
Q  157 gaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    ||||||||||||||| | |||| || |||||||| ||||| |||| ||||||| || ||||||||||    
T  30098982 gaagcacgaacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtatccgacaccgaca 30099048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 205
Target Start/End: Original strand, 38464315 - 38464365
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtg 205  Q
    |||||||||  |||||| |||||||||  ||||||||||||||||||||||    
T  38464315 atgaagcacagacactcctcggattaggtgtgtcccggtgtcggacatgtg 38464365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 201
Target Start/End: Complemental strand, 17088402 - 17088362
Alignment:
Q  161 cacgaacactcttcggattagacgtgtcccggtgtcggaca 201  Q
    |||| |||||| ||||||||| |||||||||||||||||||    
T  17088402 cacggacactcctcggattaggcgtgtcccggtgtcggaca 17088362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 280
Target Start/End: Original strand, 17593730 - 17593778
Alignment:
Q  232 acatataaaattatactgaatcatgtgattttctcgaattattagcggt 280  Q
    ||||||| ||||| ||||||| | ||||||||||| |||||||||||||    
T  17593730 acatatataattacactgaattacgtgattttctcaaattattagcggt 17593778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 292
Target Start/End: Original strand, 22299497 - 22299548
Alignment:
Q  240 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtca 292  Q
    |||||||||||||||||||||||| |  |||||||||| |||||| |||||||    
T  22299497 aattatactgaatcatgtgatttt-ttaaattattagctgtgtcggtgtgtca 22299548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 284
Target Start/End: Complemental strand, 27932278 - 27932234
Alignment:
Q  240 aattatactgaatcatgtgattttctcgaattattagcggtgtcg 284  Q
    ||||| ||||||| |||| |||||||| |||||||||||||||||    
T  27932278 aattacactgaattatgtaattttctcaaattattagcggtgtcg 27932234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 284
Target Start/End: Original strand, 28588690 - 28588734
Alignment:
Q  240 aattatactgaatcatgtgattttctcgaattattagcggtgtcg 284  Q
    ||||| ||||||| ||||||||||||| |||||||| ||||||||    
T  28588690 aattacactgaattatgtgattttctcaaattattaccggtgtcg 28588734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 155 - 282
Target Start/End: Original strand, 263303 - 263430
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    ||||| |||| |||||| ||||||||| ||||||  ||| ||| ||| ||||||||||||||||||||| ||||||||||  || ||||| ||||||| |    
T  263303 atgaaccacggacactcctcggattaggcgtgtcttggtatcgaacacgtgtcgtgtctgacaccgacacgacactgacacttataattacactgaatta 263402  T
Q  255 tgtgattttctcgaattattagcggtgt 282  Q
    |||| ||||||| |||||||||| ||||    
T  263403 tgtggttttctcaaattattagcagtgt 263430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 5e-22; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 154 - 223
Target Start/End: Original strand, 2438660 - 2438729
Alignment:
Q  154 aatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    ||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  2438660 aatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgaca 2438729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 155 - 284
Target Start/End: Original strand, 27286223 - 27286352
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    |||||||||  ||||||||  |||||||  |||||||||||||||||||||||||||| |||| |||||||||| |||||  || ||||| ||| ||| |    
T  27286223 atgaagcacagacactctttagattagatatgtcccggtgtcggacatgtgtcgtgtccgacatcgacatgacattgacacctataattacacttaatta 27286322  T
Q  255 tgtgattttctcgaattattagcggtgtcg 284  Q
    |||||| || || ||||||||||| |||||    
T  27286323 tgtgatcttatcaaattattagcgttgtcg 27286352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 18840955 - 18841023
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    |||||||||| |||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  18840955 atgaagcacggacactcctcggattaggtgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 18841023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 155 - 283
Target Start/End: Complemental strand, 44860448 - 44860320
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    |||||||||| |||||| ||| |||||  |||||||| |||||||||  |||||||||  ||||| ||| ||||| |||| ||| ||||| ||||||| |    
T  44860448 atgaagcacggacactcctcgaattaggtgtgtcccgatgtcggacacatgtcgtgtccaacaccaacacgacaccgacacatataattacactgaatta 44860349  T
Q  255 tgtgattttctcgaattattagcggtgtc 283  Q
    || ||||||||| ||||||||||||||||    
T  44860348 tgcgattttctcaaattattagcggtgtc 44860320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 234
Target Start/End: Complemental strand, 26769639 - 26769560
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgaca 234  Q
    |||||||||| |||||| ||||||||| |||||||| |||||||||| |||||||||| || ||||||||||||| ||||    
T  26769639 atgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacatgacaccgaca 26769560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 155 - 283
Target Start/End: Original strand, 11223795 - 11223922
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    |||||||||| |||||| || |||||| |||||||||||||| |||| |||||||||| |||||| ||||||||| ||||  |  ||||| ||||||| |    
T  11223795 atgaagcacggacactcctcagattaggcgtgtcccggtgtcagaca-gtgtcgtgtccgacacctacatgacaccgacacttgtaattacactgaatta 11223893  T
Q  255 tgtgattttctcgaattattagcggtgtc 283  Q
    ||| ||||| || || ||||||| |||||    
T  11223894 tgttattttttcaaaatattagctgtgtc 11223922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 155 - 291
Target Start/End: Original strand, 22084758 - 22084899
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtg---tcggacatgtgtcgtgtctgacaccgacatgacactg--acatataaaattatactg 249  Q
    |||||||||  |||||| ||||||||| ||||||||||||   || |||| |||| ||||| ||||| |||| || || |  ||||||||||||| ||||    
T  22084758 atgaagcacagacactcatcggattaggcgtgtcccggtggtgtcagacacgtgttgtgtccgacactgacacgataccggcacatataaaattacactg 22084857  T
Q  250 aatcatgtgattttctcgaattattagcggtgtcgatgtgtc 291  Q
    ||| || |||||||||| |||||||| |||||| ||||||||    
T  22084858 aattatatgattttctcaaattattaacggtgttgatgtgtc 22084899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 155 - 274
Target Start/End: Complemental strand, 37419871 - 37419752
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    |||||||||| |||||| ||||||||| ||||||||||||||||||| |  ||||||| |||||||||| ||||| | ||  |  ||||| |||||||      
T  37419871 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgcatcgtgtccgacaccgacacgacaccggcacttgtaattacactgaattt 37419772  T
Q  255 tgtgattttctcgaattatt 274  Q
    ||||||||| || |||||||    
T  37419771 tgtgattttttcaaattatt 37419752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 156 - 294
Target Start/End: Complemental strand, 17776714 - 17776576
Alignment:
Q  156 tgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcat 255  Q
    ||||||||| |||||| ||||||||| | |||||||  ||||||||   ||||||||  |||||||| ||||||||||| ||| ||||| ||||| | ||    
T  17776714 tgaagcacggacactcctcggattaggcctgtcccgaggtcggacacacgtcgtgtccaacaccgacttgacactgacacatataattacactgacttat 17776615  T
Q  256 gtgattttctcgaattattagcggtgtcgatgtgtcagt 294  Q
    ||| ||||||  ||||||||  ||| ||| |||||||||    
T  17776614 gtggttttcttaaattattattggtatcggtgtgtcagt 17776576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 294
Target Start/End: Original strand, 21782746 - 21782888
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgaca----tataaaattatactga 250  Q
    |||||||||| ||||||  | |||||||||||||||||||| ||||| |||||||| |||||||| |||  |||| ||||     | | ||||| |||||    
T  21782746 atgaagcacggacactccacagattagacgtgtcccggtgttggacacgtgtcgtgcctgacaccaacacaacac-gacaccggcacataattacactga 21782844  T
Q  251 atcatgtgattttctcgaattattagcggtgtcgatgtgtcagt 294  Q
    || ||||||||||||| |||||||||| ||||||  ||||||||    
T  21782845 attatgtgattttctcaaattattagcagtgtcggcgtgtcagt 21782888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 155 - 284
Target Start/End: Original strand, 24975257 - 24975385
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    |||||||||| |||||| || |||||||  |||||| ||||||||||  ||| ||||||||||| |||| ||||| |||  ||| | ||| ||||||| |    
T  24975257 atgaagcacggacactcctcagattagatttgtcccagtgtcggacacatgt-gtgtctgacacggacacgacaccgacgcatatatttacactgaatta 24975355  T
Q  255 tgtgattttctcgaattattagcggtgtcg 284  Q
    |  ||||||||| |||||||||||||||||    
T  24975356 tacgattttctcaaattattagcggtgtcg 24975385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 283
Target Start/End: Complemental strand, 4207984 - 4207857
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    ||||| || ||||||||||||||||| ||||||  |||||||| ||| |||||||||| |||||||||| || || |||| ||| ||||| ||| ||| |    
T  4207984 atgaaacatgaacactcttcggattaaacgtgtttcggtgtcgaacacgtgtcgtgtccgacaccgacacgataccgaca-atataattacactaaatta 4207886  T
Q  255 tgtgattttctcgaattattagcggtgtc 283  Q
    || | |||| || ||||||||| ||||||    
T  4207885 tgcgcttttttcaaattattagtggtgtc 4207857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 15972990 - 15972922
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    |||||||||| ||| ||||||||||||  ||||||||| |||||||| |||||||||| ||||||||||    
T  15972990 atgaagcacggacattcttcggattaggtgtgtcccggcgtcggacacgtgtcgtgtccgacaccgaca 15972922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 150 - 294
Target Start/End: Original strand, 34784908 - 34785052
Alignment:
Q  150 tatcaatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactg 249  Q
    |||| |||||||||  |||||| ||| || || |||||||| ||||| |||| |||||||||| || ||||||| ||||| |||| ||| ||||| |||     
T  34784908 tatctatgaagcacagacactcctcgaataaggcgtgtccccgtgtcagacaggtgtcgtgtccgataccgacacgacaccgacacatataattacacta 34785007  T
Q  250 aatcatgtgattttctcgaattattagcggtgtcgatgtgtcagt 294  Q
    ||| ||||||||||||  ||  |||||  |||||| |||||||||    
T  34785008 aattatgtgattttctaaaaaaattagttgtgtcggtgtgtcagt 34785052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 155 - 265
Target Start/End: Original strand, 36096306 - 36096416
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    |||||||||| |||||||| || | || |||||||| ||||| |||| |||||||||| |||| ||||| ||||| |||| ||| ||||| |||| ||      
T  36096306 atgaagcacggacactctttggttaaggcgtgtccccgtgtcagacacgtgtcgtgtccgacatcgacacgacaccgacaaatataattacactgcattt 36096405  T
Q  255 tgtgattttct 265  Q
    |||||||||||    
T  36096406 tgtgattttct 36096416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 226 - 294
Target Start/End: Complemental strand, 31808134 - 31808066
Alignment:
Q  226 acactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagt 294  Q
    ||||||||| ||| ||||| ||||||| |||||||||| |  ||||||||||||||||| |||||||||    
T  31808134 acactgacacatataattacactgaattatgtgattttgttaaattattagcggtgtcggtgtgtcagt 31808066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 154 - 294
Target Start/End: Original strand, 36756274 - 36756414
Alignment:
Q  154 aatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatc 253  Q
    ||||||||||  |||||| | ||||||| |||||  ||||||||||||||||| ||||  |||||  ||| ||||| ||||  || ||||| |||||||     
T  36756274 aatgaagcacagacactcctaggattaggcgtgttgcggtgtcggacatgtgttgtgttcgacactaacacgacaccgacacttataattacactgaatt 36756373  T
Q  254 atgtgattttctcgaattattagcggtgtcgatgtgtcagt 294  Q
    |||| ||||  || |||||||||  ||||||| ||||||||    
T  36756374 atgttatttcttcaaattattagttgtgtcgacgtgtcagt 36756414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 155 - 219
Target Start/End: Original strand, 38117101 - 38117165
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacacc 219  Q
    |||||||||| |||| | ||||||||| ||||||||||||||||||| |||| ||||| ||||||    
T  38117101 atgaagcacggacacccctcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacacc 38117165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 155 - 214
Target Start/End: Original strand, 15907853 - 15907912
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctg 214  Q
    |||||||||| |||||| || |||| | ||||||||||||||||| ||||||||||||||    
T  15907853 atgaagcacggacactcatcagattgggcgtgtcccggtgtcggatatgtgtcgtgtctg 15907912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 231 - 294
Target Start/End: Complemental strand, 23718078 - 23718015
Alignment:
Q  231 gacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagt 294  Q
    |||| ||| ||||| ||||||| |||||| |||||| ||||||||||||||||| |||||||||    
T  23718078 gacacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagt 23718015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 231 - 294
Target Start/End: Complemental strand, 24105750 - 24105687
Alignment:
Q  231 gacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagt 294  Q
    |||| ||| ||||| ||||||| |||||| |||||| ||||||||||||||||| |||||||||    
T  24105750 gacacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagt 24105687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 201
Target Start/End: Original strand, 15909572 - 15909618
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggaca 201  Q
    ||||||||||||||||||||| ||||| |||||||| ||||||||||    
T  15909572 atgaagcacgaacactcttcgaattaggcgtgtccctgtgtcggaca 15909618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 218
Target Start/End: Complemental strand, 35449626 - 35449561
Alignment:
Q  155 atgaagcacgaacactcttcggattaga--cgtgtcccggtgtcggacatgtgtcgtgtctgacac 218  Q
    |||||||||  |||||| ||||||||||  ||||| | ||||||||||||||||||||||||||||    
T  35449626 atgaagcacagacactcctcggattagagacgtgttctggtgtcggacatgtgtcgtgtctgacac 35449561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 284
Target Start/End: Original strand, 18889550 - 18889651
Alignment:
Q  184 gtgtcccggtgtcggacatgtgtcg-tgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgt 282  Q
    |||||| ||||||||||||| |||| |||| |||||  ||| ||||| |||| |||  |||| ||||||| ||||||||||||| | |||||||||| ||    
T  18889550 gtgtccgggtgtcggacatgcgtcggtgtccgacacaaacaagacaccgacacatatgattacactgaattatgtgattttctcaatttattagcggcgt 18889649  T
Q  283 cg 284  Q
    ||    
T  18889650 cg 18889651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 154 - 223
Target Start/End: Complemental strand, 19942383 - 19942314
Alignment:
Q  154 aatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    ||||||||| | |||||| ||||||||| |||||||||||||| ||||  || |||||| ||||||||||    
T  19942383 aatgaagcatggacactcctcggattaggcgtgtcccggtgtcagacacatgccgtgtccgacaccgaca 19942314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 223
Target Start/End: Complemental strand, 5367289 - 5367241
Alignment:
Q  175 ggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    ||||||| |||||||||| |||||| |||||||||||| ||||||||||    
T  5367289 ggattaggcgtgtcccggagtcggatatgtgtcgtgtccgacaccgaca 5367241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 284
Target Start/End: Complemental strand, 21616805 - 21616761
Alignment:
Q  240 aattatactgaatcatgtgattttctcgaattattagcggtgtcg 284  Q
    ||||| ||||||| ||||||||||||| |||||||||||||||||    
T  21616805 aattacactgaattatgtgattttctcaaattattagcggtgtcg 21616761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 226
Target Start/End: Complemental strand, 27084375 - 27084315
Alignment:
Q  166 acactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatga 226  Q
    |||||| || |||||| |||||| |||||| ||||| |||||||||| |||||||||||||    
T  27084375 acactcctccgattaggcgtgtctcggtgttggacacgtgtcgtgtccgacaccgacatga 27084315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 37559094 - 37559026
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    |||||||||| |||||| ||||||||  ||||| ||||||||||||| |||||  ||| ||||||||||    
T  37559094 atgaagcacggacactcctcggattaagcgtgtaccggtgtcggacacgtgtcaagtccgacaccgaca 37559026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 156 - 223
Target Start/End: Complemental strand, 21091839 - 21091772
Alignment:
Q  156 tgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    ||||||||| |||||||||||| |||  ||||||||||||| |||| ||| | |||||||||| ||||    
T  21091839 tgaagcacggacactcttcggaataggtgtgtcccggtgtccgacaggtggcttgtctgacactgaca 21091772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 201
Target Start/End: Original strand, 10535687 - 10535733
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggaca 201  Q
    ||||||||||||||||| ||||||||| ||||||| |||||| ||||    
T  10535687 atgaagcacgaacactcctcggattaggcgtgtcctggtgtcagaca 10535733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 217
Target Start/End: Complemental strand, 19959943 - 19959881
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgaca 217  Q
    |||||||||  | |||||| |||||||||| ||| ||||||||||||  ||||||||||||||    
T  19959943 atgaagcaccgatactctttggattagacgcgtctcggtgtcggacacttgtcgtgtctgaca 19959881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 284
Target Start/End: Original strand, 37411266 - 37411304
Alignment:
Q  246 actgaatcatgtgattttctcgaattattagcggtgtcg 284  Q
    ||||||| ||||||||||||| |||||||||||||||||    
T  37411266 actgaattatgtgattttctcaaattattagcggtgtcg 37411304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 275
Target Start/End: Complemental strand, 2331900 - 2331802
Alignment:
Q  175 ggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattatt 274  Q
    ||||||| ||||||| |||||| |||| |||  ||| | ||||| |||| ||||| |||| |||||  || ||||||| ||||||||||||| |||||||    
T  2331900 ggattaggcgtgtcctggtgtcagacacgtgctgtgcccgacactgacacgacaccgacacataaa--tacactgaattatgtgattttctcaaattatt 2331803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 281
Target Start/End: Complemental strand, 25846784 - 25846743
Alignment:
Q  240 aattatactgaatcatgtgattttctcgaattattagcggtg 281  Q
    ||||| ||||||||||||||||||||| ||||||||| ||||    
T  25846784 aattacactgaatcatgtgattttctcaaattattagtggtg 25846743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 284
Target Start/End: Complemental strand, 28678003 - 28677908
Alignment:
Q  183 cgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgt 282  Q
    |||||||| ||||||||||  |||||||| |||||||||||     |  ||||||||  ||| ||||||| |||||||||| || |||||||||||||||    
T  28678003 cgtgtccctgtgtcggacacttgtcgtgtttgacaccgacac----cgaacatataa--ttacactgaattatgtgattttttcaaattattagcggtgt 28677910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 294
Target Start/End: Original strand, 29970566 - 29970619
Alignment:
Q  241 attatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagt 294  Q
    |||| ||||||  ||| ||||||||| |||||||||||||||| ||||||||||    
T  29970566 attacactgaactatgcgattttctcaaattattagcggtgtcaatgtgtcagt 29970619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 37497238 - 37497169
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcg-tgtctgacaccgaca 223  Q
    |||||||||| |||||  | ||||||| | |||||||||| || |||||||||| |||||||||||||||    
T  37497238 atgaagcacggacacttctgggattagccatgtcccggtgccgaacatgtgtcggtgtctgacaccgaca 37497169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 284
Target Start/End: Complemental strand, 1328021 - 1327977
Alignment:
Q  240 aattatactgaatcatgtgattttctcgaattattagcggtgtcg 284  Q
    |||||||||||||  | |||||||||| |||||||||||||||||    
T  1328021 aattatactgaattttatgattttctcaaattattagcggtgtcg 1327977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 294
Target Start/End: Original strand, 4882670 - 4882766
Alignment:
Q  198 gacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagt 294  Q
    ||||||| |||||||||||||||||| ||||  ||||  |  ||||| ||||||| || | ||||| || ||| ||||||||| |||| ||||||||    
T  4882670 gacatgtatcgtgtctgacaccgacacgacatcgacacttgtaattacactgaattatatcattttttcaaataattagcggtatcgacgtgtcagt 4882766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 284
Target Start/End: Complemental strand, 18276564 - 18276520
Alignment:
Q  240 aattatactgaatcatgtgattttctcgaattattagcggtgtcg 284  Q
    ||||| ||||||| | ||||||||||| |||||||||||||||||    
T  18276564 aattacactgaattaagtgattttctcaaattattagcggtgtcg 18276520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 20242669 - 20242737
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    |||||||||  ||||||||||||| || |||||||  ||||| |||| |||| ||||| ||||||||||    
T  20242669 atgaagcacagacactcttcggataaggcgtgtcctcgtgtcagacacgtgttgtgtccgacaccgaca 20242737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 30404792 - 30404860
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    ||||||||| ||| ||  || |||||| | ||||| |||||||||||||||||||||| ||| ||||||    
T  30404792 atgaagcacaaacgcttctcagattaggcatgtcctggtgtcggacatgtgtcgtgtccgacgccgaca 30404860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 211
Target Start/End: Original strand, 34993924 - 34993980
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgt 211  Q
    ||||||||||||||||| | | ||||| |||||||| ||||||||||  ||||||||    
T  34993924 atgaagcacgaacactccttgaattaggcgtgtcccagtgtcggacacatgtcgtgt 34993980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 155 - 294
Target Start/End: Complemental strand, 241722 - 241583
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    |||||||||| |||||  ||||||||| ||||||||||||||||||| |||||||||| |||||| ||| ||||| ||||   | ||||| ||| ||| |    
T  241722 atgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccaacacgacaccgacactcataattacactaaatta 241623  T
Q  255 tgtgattttctcgaattattagcggtgtcgatgtgtcagt 294  Q
    |||||||||  | |||||||||| ||||||  ||||||||    
T  241622 tgtgatttttccaaattattagctgtgtcggcgtgtcagt 241583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 175 - 293
Target Start/End: Complemental strand, 53288 - 53170
Alignment:
Q  175 ggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattatt 274  Q
    |||||| |||||||||||||||||||| ||||| |||| |||||||||| | ||| ||||  || ||||| ||||||| ||||||||||||| |||||||    
T  53288 ggattaaacgtgtcccggtgtcggacacgtgtcatgtccgacaccgacacggcaccgacacttataattacactgaattatgtgattttctcaaattatt 53189  T
Q  275 agcggtgtcgatgtgtcag 293  Q
     ||||| |||  |||||||    
T  53188 ggcggtatcggcgtgtcag 53170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 155 - 284
Target Start/End: Original strand, 3780 - 3909
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 254  Q
    |||||||| | |||||| ||||||||| |||||| || |||||||||||||||||||| |||||| ||| ||||||||||  |  ||||| ||||||| |    
T  3780 atgaagcaaggacactcctcggattaggcgtgtctcgatgtcggacatgtgtcgtgtccgacaccaacacgacactgacacttgtaattacactgaatta 3879  T
Q  255 tgtgattttctcgaattattagcggtgtcg 284  Q
    ||||||||| |  |||||||| | ||||||    
T  3880 tgtgatttttttaaattattaaccgtgtcg 3909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 234
Target Start/End: Complemental strand, 71853 - 71774
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgaca 234  Q
    |||||||||  |||||| ||||||||| ||||||||||||||||||| |||| ||||| |||||||||| ||||||||||    
T  71853 atgaagcaccgacactcctcggattagtcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacacgacactgaca 71774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 155 - 294
Target Start/End: Complemental strand, 92939 - 92796
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctga----caccgacatgacactgacatataaaattatactga 250  Q
    |||||||||| |||||| ||||||||| ||||||| |||||| ||||||||||||||| ||    |||| |||  | |||||||  |  ||||| |||||    
T  92939 atgaagcacggacactcctcggattaggcgtgtccaggtgtccgacatgtgtcgtgtccgacacccaccaacacaaaactgacacttgtaattacactga 92840  T
Q  251 atcatgtgattttctcgaattattagcggtgtcgatgtgtcagt 294  Q
    || |||| |||||||| |||||||||||||||||  ||||||||    
T  92839 attatgtaattttctcaaattattagcggtgtcggcgtgtcagt 92796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 156 - 223
Target Start/End: Complemental strand, 70394 - 70327
Alignment:
Q  156 tgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    |||||||||||||||| ||||||||| | ||||| ||||||||||| |||||||||| ||||||||||    
T  70394 tgaagcacgaacactcatcggattaggcatgtcctggtgtcggacacgtgtcgtgtccgacaccgaca 70327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 283
Target Start/End: Original strand, 44486 - 44584
Alignment:
Q  185 tgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtc 283  Q
    |||||| |||||||||| |||| |||||  ||||||||| || || |||| ||| ||||| ||||||| ||||||||||||| |||| |||||||||||    
T  44486 tgtcccagtgtcggacacgtgttgtgtccaacaccgacacgataccgacacatataattacactgaattatgtgattttctcaaatttttagcggtgtc 44584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 159 - 232
Target Start/End: Complemental strand, 3052 - 2979
Alignment:
Q  159 agcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactga 232  Q
    |||||| |||||| ||||||||| ||||| ||||||||| ||| ||||||||||||| ||||||| ||||||||    
T  3052 agcacggacactcctcggattaggcgtgttccggtgtcgaacacgtgtcgtgtctgataccgacacgacactga 2979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 211
Target Start/End: Original strand, 4823 - 4879
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgt 211  Q
    |||||||||| |||||| ||||||||| |||||||| ||||||||||||||||||||    
T  4823 atgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgt 4879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 404 - 472
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    |||||||||| |||||| |||||||||  |||||||||||||||||| | |||||||| ||||||||||    
T  404 atgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccgaca 472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 8915 - 8847
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    |||||||||| | |||| || |||||| |||||| |||||||||||| |||||||||| ||||||||||    
T  8915 atgaagcacggagactcctcagattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgaca 8847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 172 - 284
Target Start/End: Original strand, 84921 - 85033
Alignment:
Q  172 ttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaatt 271  Q
    |||||||||| ||||||| | ||||||||| |||| ||||  |||| ||||||||||| |||||||| ||||| ||  ||| || |||||||||  ||||    
T  84921 ttcggattaggcgtgtcctgttgtcggacacgtgttgtgttcgacatcgacatgacaccgacatatataattacacataattatatgattttcttaaatt 85020  T
Q  272 attagcggtgtcg 284  Q
    | ||| |||||||    
T  85021 agtagtggtgtcg 85033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1528 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 198 - 293
Target Start/End: Complemental strand, 1120 - 1025
Alignment:
Q  198 gacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcag 293  Q
    ||||| ||| |||||  |||||||||  ||||||||| ||| | ||| ||||||| |||| ||||| || ||||||||||||||||| ||||||||    
T  1120 gacatttgttgtgtccaacaccgacaccacactgacacatatagttacactgaattatgtaattttttcaaattattagcggtgtcggtgtgtcag 1025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 219
Target Start/End: Complemental strand, 14644 - 14580
Alignment:
Q  155 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacacc 219  Q
    |||||||||| |||||| |  |||||| |||||| |||||||||||| |||||||||| ||||||    
T  14644 atgaagcacgtacactccttcgattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacacc 14580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 275
Target Start/End: Complemental strand, 21119 - 21051
Alignment:
Q  207 cgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattatta 275  Q
    ||||||||||||||||| || || |||| ||| |||||||| || | ||||||||||||| ||||||||    
T  21119 cgtgtctgacaccgacacgataccgacacatataattataccgacttatgtgattttctcaaattatta 21051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 290
Target Start/End: Original strand, 135308 - 135378
Alignment:
Q  220 gacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgt 290  Q
    |||| ||||| |||| ||| ||||| || |||| ||||||||||||| |||||||||| |||||| |||||    
T  135308 gacacgacaccgacacatataattacacagaattatgtgattttctcaaattattagcagtgtcggtgtgt 135378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 17539 - 17612
Alignment:
Q  150 tatcaatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    |||| |||||||||| | ||||  | |||||| |||||||||||||||||||| | | |||||| |||||||||    
T  17539 tatctatgaagcacggaaactcagctgattaggcgtgtcccggtgtcggacatatattgtgtctaacaccgaca 17612  T

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Target: scaffold0697 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 1733 - 1693
Alignment:
Q  183 cgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 223  Q
    |||||||  ||||||||||||||||||||| ||||||||||    
T  1733 cgtgtcctagtgtcggacatgtgtcgtgtccgacaccgaca 1693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 248 - 292
Target Start/End: Complemental strand, 26428 - 26384
Alignment:
Q  248 tgaatcatgtgattttctcgaattattagcggtgtcgatgtgtca 292  Q
    ||||| ||||||||||||| ||||||||| |||||||| ||||||    
T  26428 tgaattatgtgattttctcaaattattagtggtgtcgacgtgtca 26384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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