View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15324_low_68 (Length: 208)

Name: NF15324_low_68
Description: NF15324
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15324_low_68
NF15324_low_68
[»] chr7 (1 HSPs)
chr7 (12-74)||(55260-55322)


Alignment Details
Target: chr7 (Bit Score: 59; Significance: 3e-25; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 55260 - 55322
Alignment:
12 catcatcaattatatttaatagaaattgtggtagtagtaaacacaaatgttatagaactattg 74  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
55260 catcatcaattatatttaatagaaattgtggtagtagcaaacacaaatgttatagaactattg 55322  T

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