View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15326_low_6 (Length: 434)

Name: NF15326_low_6
Description: NF15326
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15326_low_6
NF15326_low_6
[»] chr4 (33 HSPs)
chr4 (247-431)||(5937838-5938022)
chr4 (247-433)||(39732727-39732913)
chr4 (247-428)||(50523866-50524047)
chr4 (44-162)||(50523663-50523781)
chr4 (44-162)||(39732998-39733116)
chr4 (44-148)||(5937685-5937789)
chr4 (66-162)||(53663449-53663545)
chr4 (44-159)||(49723971-49724086)
chr4 (44-162)||(30418185-30418303)
chr4 (247-399)||(8503719-8503871)
chr4 (66-162)||(45105994-45106090)
chr4 (66-162)||(48407140-48407236)
chr4 (247-353)||(16203089-16203195)
chr4 (77-162)||(8510346-8510430)
chr4 (66-162)||(22606173-22606270)
chr4 (44-162)||(28963660-28963778)
chr4 (44-162)||(29385836-29385954)
chr4 (247-317)||(28911614-28911684)
chr4 (44-162)||(38767979-38768097)
chr4 (69-162)||(16202915-16203007)
chr4 (44-149)||(53403908-53404013)
chr4 (82-158)||(28911770-28911846)
chr4 (78-162)||(51677286-51677369)
chr4 (247-298)||(26457163-26457214)
chr4 (255-354)||(24038094-24038193)
chr4 (255-354)||(24246614-24246713)
chr4 (255-354)||(31431068-31431167)
chr4 (255-354)||(39382990-39383089)
chr4 (247-298)||(51677154-51677205)
chr4 (255-317)||(18140485-18140547)
chr4 (255-317)||(49127698-49127760)
chr4 (324-362)||(51677112-51677150)
chr4 (257-317)||(53404116-53404176)
[»] chr2 (22 HSPs)
chr2 (247-426)||(44002571-44002750)
chr2 (247-423)||(37551484-37551661)
chr2 (44-162)||(44002835-44002953)
chr2 (247-376)||(19860227-19860356)
chr2 (44-138)||(19860454-19860548)
chr2 (44-162)||(43342068-43342186)
chr2 (66-162)||(37640575-37640671)
chr2 (247-353)||(43694961-43695067)
chr2 (66-162)||(7473706-7473802)
chr2 (44-162)||(32497002-32497120)
chr2 (88-162)||(37996905-37996979)
chr2 (44-162)||(35457978-35458094)
chr2 (44-133)||(17481005-17481094)
chr2 (70-162)||(12015674-12015765)
chr2 (255-351)||(33598118-33598214)
chr2 (69-137)||(43695176-43695243)
chr2 (255-354)||(14379734-14379833)
chr2 (255-354)||(31686820-31686919)
chr2 (255-354)||(31786773-31786872)
chr2 (255-354)||(40254418-40254517)
chr2 (255-354)||(44282568-44282667)
chr2 (257-355)||(12015933-12016031)
[»] chr5 (27 HSPs)
chr5 (247-433)||(40979337-40979522)
chr5 (247-431)||(19375401-19375585)
chr5 (247-417)||(10900065-10900235)
chr5 (44-162)||(10900320-10900437)
chr5 (44-162)||(40979607-40979722)
chr5 (46-162)||(11018223-11018339)
chr5 (64-162)||(8958315-8958413)
chr5 (48-162)||(41742017-41742131)
chr5 (66-162)||(41039950-41040046)
chr5 (252-315)||(2526319-2526382)
chr5 (66-162)||(31905619-31905716)
chr5 (69-162)||(33387517-33387609)
chr5 (85-158)||(2526466-2526538)
chr5 (247-317)||(53662-53732)
chr5 (342-431)||(25256860-25256951)
chr5 (342-431)||(25320651-25320742)
chr5 (247-327)||(33387691-33387771)
chr5 (44-162)||(25256601-25256724)
chr5 (44-162)||(25320392-25320515)
chr5 (255-353)||(29367461-29367559)
chr5 (252-330)||(33082906-33082984)
chr5 (119-162)||(53534-53577)
chr5 (255-354)||(29542474-29542573)
chr5 (255-317)||(3260871-3260933)
chr5 (255-317)||(14082924-14082986)
chr5 (255-317)||(33115067-33115129)
chr5 (255-317)||(42663467-42663529)
[»] chr3 (38 HSPs)
chr3 (247-434)||(50392815-50393002)
chr3 (247-429)||(30809730-30809912)
chr3 (44-162)||(30810896-30811014)
chr3 (247-423)||(44610819-44610995)
chr3 (44-162)||(50392614-50392730)
chr3 (247-376)||(45489106-45489235)
chr3 (44-162)||(28182558-28182677)
chr3 (44-162)||(45488900-45489018)
chr3 (68-162)||(48181257-48181352)
chr3 (66-162)||(39251665-39251761)
chr3 (44-162)||(45150786-45150904)
chr3 (252-353)||(44328656-44328757)
chr3 (71-162)||(42274705-42274796)
chr3 (44-162)||(11263879-11263997)
chr3 (66-162)||(53687191-53687287)
chr3 (67-162)||(51229915-51230010)
chr3 (247-353)||(28883687-28883793)
chr3 (68-162)||(44610644-44610735)
chr3 (44-162)||(48254295-48254413)
chr3 (44-137)||(44328866-44328957)
chr3 (47-114)||(33330088-33330154)
chr3 (69-158)||(28883882-28883970)
chr3 (252-316)||(40237333-40237397)
chr3 (85-162)||(42074580-42074653)
chr3 (255-353)||(21985363-21985461)
chr3 (247-317)||(51407497-51407567)
chr3 (44-136)||(40237482-40237572)
chr3 (255-354)||(51129047-51129146)
chr3 (255-353)||(41535811-41535909)
chr3 (255-348)||(46797771-46797865)
chr3 (255-317)||(47697110-47697172)
chr3 (117-162)||(51407652-51407697)
chr3 (278-354)||(47141457-47141533)
chr3 (250-353)||(39267554-39267657)
chr3 (255-317)||(1527642-1527704)
chr3 (255-317)||(42074425-42074487)
chr3 (255-317)||(52692038-52692100)
chr3 (66-114)||(33025622-33025670)
[»] scaffold0184 (2 HSPs)
scaffold0184 (247-428)||(9689-9870)
scaffold0184 (44-101)||(9549-9606)
[»] chr1 (39 HSPs)
chr1 (247-429)||(41512065-41512247)
chr1 (49-162)||(41512332-41512445)
chr1 (247-429)||(24075443-24075625)
chr1 (247-423)||(42137696-42137865)
chr1 (247-384)||(3850860-3850997)
chr1 (47-159)||(42137496-42137608)
chr1 (44-162)||(46033469-46033587)
chr1 (44-162)||(47655679-47655797)
chr1 (66-162)||(44740333-44740429)
chr1 (44-162)||(13509732-13509850)
chr1 (44-162)||(49430820-49430938)
chr1 (254-348)||(1762219-1762314)
chr1 (68-162)||(4485000-4485094)
chr1 (47-162)||(45179519-45179633)
chr1 (44-162)||(11050892-11051010)
chr1 (106-162)||(24075710-24075766)
chr1 (83-162)||(6706318-6706397)
chr1 (247-317)||(11829110-11829180)
chr1 (247-313)||(31100461-31100527)
chr1 (66-162)||(50031017-50031114)
chr1 (247-353)||(27065022-27065128)
chr1 (44-162)||(27067323-27067440)
chr1 (76-160)||(11829264-11829347)
chr1 (69-162)||(1762406-1762497)
chr1 (252-354)||(7593233-7593335)
chr1 (120-162)||(27416752-27416794)
chr1 (255-354)||(15353302-15353401)
chr1 (255-354)||(26821456-26821555)
chr1 (255-354)||(36496084-36496183)
chr1 (255-354)||(38627612-38627711)
chr1 (255-354)||(38843225-38843324)
chr1 (255-354)||(50979268-50979367)
chr1 (247-317)||(11051157-11051227)
chr1 (255-317)||(27000299-27000361)
chr1 (255-317)||(51488528-51488590)
chr1 (44-124)||(7385454-7385534)
chr1 (70-162)||(20473622-20473714)
chr1 (70-162)||(20557839-20557931)
chr1 (255-354)||(5271536-5271635)
[»] chr8 (25 HSPs)
chr8 (249-376)||(2025487-2025614)
chr8 (44-162)||(2025701-2025819)
chr8 (247-421)||(7636372-7636545)
chr8 (44-162)||(36821418-36821537)
chr8 (44-162)||(22936362-22936479)
chr8 (66-162)||(35164195-35164291)
chr8 (247-353)||(3590071-3590177)
chr8 (68-154)||(35802160-35802246)
chr8 (44-162)||(13015867-13015984)
chr8 (50-162)||(3590259-3590368)
chr8 (66-162)||(45276217-45276312)
chr8 (44-162)||(8416851-8416970)
chr8 (48-114)||(38023160-38023226)
chr8 (71-131)||(7637448-7637507)
chr8 (255-354)||(30210468-30210567)
chr8 (255-354)||(30984334-30984433)
chr8 (255-317)||(34774380-34774442)
chr8 (278-354)||(629480-629556)
chr8 (44-108)||(924267-924331)
chr8 (118-156)||(33165986-33166024)
chr8 (255-317)||(35164384-35164446)
chr8 (256-317)||(924134-924195)
chr8 (255-296)||(13015733-13015774)
chr8 (82-162)||(37683968-37684047)
chr8 (312-376)||(38022939-38023003)
[»] chr7 (33 HSPs)
chr7 (247-422)||(19544467-19544642)
chr7 (274-431)||(47158248-47158405)
chr7 (247-422)||(298655-298830)
chr7 (252-423)||(47085689-47085860)
chr7 (66-162)||(26826560-26826656)
chr7 (71-162)||(43664635-43664725)
chr7 (44-162)||(15000056-15000174)
chr7 (44-159)||(30825380-30825495)
chr7 (44-162)||(25472556-25472674)
chr7 (44-162)||(47158015-47158132)
chr7 (247-351)||(32450750-32450854)
chr7 (44-159)||(30139620-30139735)
chr7 (44-162)||(47085480-47085597)
chr7 (44-162)||(26827559-26827673)
chr7 (68-162)||(298476-298569)
chr7 (247-317)||(39857110-39857180)
chr7 (69-162)||(25970621-25970714)
chr7 (71-156)||(1999990-2000073)
chr7 (247-314)||(2000163-2000230)
chr7 (47-132)||(11341647-11341731)
chr7 (47-162)||(25191657-25191771)
chr7 (44-162)||(26169763-26169880)
chr7 (252-338)||(40233445-40233531)
chr7 (60-133)||(39857253-39857325)
chr7 (255-354)||(25341477-25341576)
chr7 (255-354)||(31012435-31012534)
chr7 (47-162)||(32450939-32451052)
chr7 (250-353)||(4035455-4035558)
chr7 (247-318)||(45202503-45202574)
chr7 (255-317)||(41064642-41064704)
chr7 (117-154)||(45202666-45202703)
chr7 (257-353)||(39958428-39958524)
chr7 (255-307)||(47238972-47239024)
[»] chr6 (10 HSPs)
chr6 (247-422)||(20838490-20838665)
chr6 (247-353)||(30134144-30134250)
chr6 (44-162)||(27825187-27825305)
chr6 (252-315)||(4146847-4146910)
chr6 (85-158)||(4146992-4147064)
chr6 (255-332)||(27825042-27825119)
chr6 (102-162)||(20838345-20838405)
chr6 (44-162)||(10683343-10683461)
chr6 (255-354)||(30018847-30018946)
chr6 (91-159)||(30134334-30134401)
[»] scaffold0097 (1 HSPs)
scaffold0097 (66-162)||(32876-32972)
[»] scaffold0702 (1 HSPs)
scaffold0702 (257-376)||(4569-4687)
[»] scaffold0662 (1 HSPs)
scaffold0662 (257-376)||(3411-3529)
[»] scaffold0069 (1 HSPs)
scaffold0069 (67-162)||(16999-17094)
[»] scaffold0006 (1 HSPs)
scaffold0006 (67-162)||(91724-91819)
[»] scaffold0808 (1 HSPs)
scaffold0808 (76-162)||(4276-4362)
[»] scaffold0068 (1 HSPs)
scaffold0068 (66-162)||(37884-37980)


Alignment Details
Target: chr4 (Bit Score: 157; Significance: 2e-83; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 247 - 431
Target Start/End: Original strand, 5937838 - 5938022
Alignment:
Q  247 tttattggagaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctaaacca 346  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  5937838 tttattggagaattgattctagctaactcaaaagctaggaattgtagcttcatccataattgcttttggagatgagaattgattttgagaagctgaacca 5937937  T
Q  347 aacatgttggaattgcaagttttcacttttaaagctaccataagtgcttttaagaggtatagaagctgaaccaaacacactctta 431  Q
    |||||| |||||||||||||||||||||||  |||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  5937938 aacatgctggaattgcaagttttcacttttgtagctaccagaagtgcttttaagaggtgtagaagctgaaccaaacacactctta 5938022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 247 - 433
Target Start/End: Complemental strand, 39732913 - 39732727
Alignment:
Q  247 tttattggagaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctaaacca 346  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  39732913 tttattggagaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctgaacca 39732814  T
Q  347 aacatgttggaattgcaagttttcacttttaaagctaccataagtgcttttaagaggtatagaagctgaaccaaacacactcttaat 433  Q
    |||||||||||||||||| ||||||| ||| ||||||||| ||||||||||||||| | ||||||||||||||||||||||| ||||    
T  39732813 aacatgttggaattgcaaattttcacctttgaagctaccagaagtgcttttaagagttgtagaagctgaaccaaacacactcataat 39732727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 247 - 428
Target Start/End: Original strand, 50523866 - 50524047
Alignment:
Q  247 tttattggagaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctaaacca 346  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||    
T  50523866 tttattggagaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagttgaacca 50523965  T
Q  347 aacatgttggaattgcaagttttcacttttaaagctaccataagtgcttttaagaggtatagaagctgaaccaaacacactc 428  Q
    ||||| ||| |||||||||| ||||||||| |||||| || || |||||||| ||||| |||||||||||||||||||||||    
T  50523966 aacatattgaaattgcaagtgttcacttttgaagctatcagaaatgcttttaggaggtgtagaagctgaaccaaacacactc 50524047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 44 - 162
Target Start/End: Original strand, 50523663 - 50523781
Alignment:
Q  44 tacagtaaatttgaaaggaaataccgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagtttt 143  Q
    ||||||||||||||||||||| |||||||| ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  50523663 tacagtaaatttgaaaggaaacaccgtaaatgaaaatctaaaatttggtaactcatgaccataaatattttatgggggctaatttggttcgttaaatttt 50523762  T
Q  144 ctgattaaatttggttcat 162  Q
    |||||||||||||||||||    
T  50523763 ctgattaaatttggttcat 50523781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 44 - 162
Target Start/End: Complemental strand, 39733116 - 39732998
Alignment:
Q  44 tacagtaaatttgaaaggaaataccgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagtttt 143  Q
    ||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| |||||    
T  39733116 tacagtaaatttgaaaggaaacaccgtgaaggacaatccaaaacttggtaactcatgaccataaatattttatgggggttaatttggtttgttatgtttt 39733017  T
Q  144 ctgattaaatttggttcat 162  Q
    |||||||||||||||||||    
T  39733016 ctgattaaatttggttcat 39732998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 44 - 148
Target Start/End: Original strand, 5937685 - 5937789
Alignment:
Q  44 tacagtaaatttgaaaggaaataccgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagtttt 143  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  5937685 tacagcaaatttgaaaggaaacaccgtaaaggaaaatccaaaacttggtaactcatgatcataaatattttatgggggctaatttggttcgttaagtttt 5937784  T
Q  144 ctgat 148  Q
    |||||    
T  5937785 ctgat 5937789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 66 - 162
Target Start/End: Original strand, 53663449 - 53663545
Alignment:
Q  66 accgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagttttctgattaaatttggttcat 162  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||   |||||||||| ||||||||||||||||||||||||||||||||||    
T  53663449 accgtaaaggaaaatccaaaatttggtaactcatgaccataaacatttttcaggggctaattaggttcgttaagttttctgattaaatttggttcat 53663545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 44 - 159
Target Start/End: Complemental strand, 49724086 - 49723971
Alignment:
Q  44 tacagtaaatttgaaaggaaataccgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagtttt 143  Q
    |||| ||||| ||||  |||| ||||||||||||||||||||| ||||||||||||||||||||| |||||    || ||||||||||||||||| ||||    
T  49724086 tacaataaatctgaatagaaacaccgtaaaggaaaatccaaaatttggtaactcatgaccataaacatttttcaaggactaatttggttcgttaattttt 49723987  T
Q  144 ctgattaaatttggtt 159  Q
    ||||||||||||||||    
T  49723986 ctgattaaatttggtt 49723971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 44 - 162
Target Start/End: Original strand, 30418185 - 30418303
Alignment:
Q  44 tacagtaaatttgaaaggaaataccgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagtttt 143  Q
    ||||||||||||||| ||  ||||||||||| ||||| ||||| | | ||| ||||||||||||| |||||  ||||||||||||| |||||||||||||    
T  30418185 tacagtaaatttgaatggggataccgtaaagaaaaattcaaaattggataagtcatgaccataaacatttttcgggggctaatttgattcgttaagtttt 30418284  T
Q  144 ctgattaaatttggttcat 162  Q
    || ||||||||||||||||    
T  30418285 ctaattaaatttggttcat 30418303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 247 - 399
Target Start/End: Complemental strand, 8503871 - 8503719
Alignment:
Q  247 tttattggagaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctaaacca 346  Q
    ||||||||| |||||||||||| |||| |||||| ||||||||||||||||| | | ||||| |||| |||||||||||| ||||||| ||  | ||||     
T  8503871 tttattggaaaattgattctagttaacacaaaagttaggaattgtagcttcaactaaaattgattttagagatgagaattaattttgaaaaattgaaccg 8503772  T
Q  347 aacatgttggaattgcaagttttcacttttaaagctaccataagtgcttttaa 399  Q
    |||  ||||||||||  |||||||||| ||||||||| || ||||| ||||||    
T  8503771 aactcgttggaattgttagttttcactattaaagctatcagaagtgtttttaa 8503719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 45106090 - 45105994
Alignment:
Q  66 accgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagttttctgattaaatttggttcat 162  Q
    |||||||||||||||  |||||||||||||||||||||||||| | |||  ||||||||| |||||| |||||||||||| ||||||||||||||||    
T  45106090 accgtaaaggaaaatttaaaacttggtaactcatgaccataaacaattttcgggggctaaattggttggttaagttttcttattaaatttggttcat 45105994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 48407236 - 48407140
Alignment:
Q  66 accgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagttttctgattaaatttggttcat 162  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||  ||||||||||||| |||| || ||||| ||||||||||| ||||||    
T  48407236 accgtaaaggaaaattcaaaatttggtaactcatgaccataaatatttttcgggggctaatttgattcgctacgttttatgattaaattttgttcat 48407140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 247 - 353
Target Start/End: Original strand, 16203089 - 16203195
Alignment:
Q  247 tttattggagaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctaaacca 346  Q
    |||| |||||||||||||||||  |||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||  | ||  ||||| |||||    
T  16203089 tttaatggagaattgattctagtcaactcaaaagctaggaattgtagcttcaaccaaaattgcttttggagaagagaattgcatctgtaaagctgaacca 16203188  T
Q  347 aacatgt 353  Q
    |||||||    
T  16203189 aacatgt 16203195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 77 - 162
Target Start/End: Complemental strand, 8510430 - 8510346
Alignment:
Q  77 aaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagttttctgattaaatttggttcat 162  Q
    |||||||||||||| ||| |||||||||||| |||||| | ||| |||||||||||||||||||||||||||||||||||||||||    
T  8510430 aaatccaaaacttgataattcatgaccataattattttctaggg-ctaatttggttcgttaagttttctgattaaatttggttcat 8510346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 66 - 162
Target Start/End: Original strand, 22606173 - 22606270
Alignment:
Q  66 accgtaaaggaaaatccaaaacttggtaa-ctcatgaccataaatattttatgggggctaatttggttcgttaagttttctgattaaatttggttcat 162  Q
    ||||||||||||||| ||||| |||| || |||||||||||||| |||||  |||||||||||||||||| |||||||||||||||||||| ||||||    
T  22606173 accgtaaaggaaaattcaaaatttggcaaactcatgaccataaacatttttcgggggctaatttggttcgctaagttttctgattaaattttgttcat 22606270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 44 - 162
Target Start/End: Original strand, 28963660 - 28963778
Alignment:
Q  44 tacagtaaatttgaaaggaaataccgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagtttt 143  Q
    ||||||||||||||| ||| | ||||||||| ||||| ||||| ||| ||| ||||||||||||| |||||    ||||||||||  |||||||||||||    
T  28963660 tacagtaaatttgaatggagacaccgtaaagaaaaattcaaaatttgataagtcatgaccataaacatttttcaagggctaatttaattcgttaagtttt 28963759  T
Q  144 ctgattaaatttggttcat 162  Q
    || ||||||||||||||||    
T  28963760 ctaattaaatttggttcat 28963778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 44 - 162
Target Start/End: Original strand, 29385836 - 29385954
Alignment:
Q  44 tacagtaaatttgaaaggaaataccgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagtttt 143  Q
    ||||||||||||||| ||  | ||||||||  ||||| ||||| | ||||| |||||||| ||||||||||  |||||||||||||||||||||| ||||    
T  29385836 tacagtaaatttgaatggggacaccgtaaataaaaattcaaaattgggtaagtcatgaccttaaatatttttcgggggctaatttggttcgttaaatttt 29385935  T
Q  144 ctgattaaatttggttcat 162  Q
    || |||||||||| |||||    
T  29385936 ctaattaaatttgattcat 29385954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 247 - 317
Target Start/End: Complemental strand, 28911684 - 28911614
Alignment:
Q  247 tttattggagaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggag 317  Q
    |||| ||||||||||||| ||| ||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  28911684 tttaatggagaattgattttagttaactcaaaagttaggaattgtagcttcatccacaattgcttttggag 28911614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 44 - 162
Target Start/End: Complemental strand, 38768097 - 38767979
Alignment:
Q  44 tacagtaaatttgaaaggaaataccgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagtttt 143  Q
    |||||||||| |||| ||  | ||||||||| ||||| ||||| ||||||||||| ||||||||| |||||   || |||||||||||||| ||||||||    
T  38768097 tacagtaaatctgaatggggacaccgtaaagaaaaattcaaaatttggtaactcacgaccataaacatttttcaggtgctaatttggttcgctaagtttt 38767998  T
Q  144 ctgattaaatttggttcat 162  Q
    | |||||||||| ||||||    
T  38767997 ccgattaaattttgttcat 38767979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 69 - 162
Target Start/End: Original strand, 16202915 - 16203007
Alignment:
Q  69 gtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagttttctgattaaatttggttcat 162  Q
    |||||| |||||| ||||||||||||||||||||||||||||||||   | ||||||||| |||| |||| |||| ||||||||||||||||||    
T  16202915 gtaaagaaaaatctaaaacttggtaactcatgaccataaatatttt-ccgaggctaatttagttcattaatttttttgattaaatttggttcat 16203007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 44 - 149
Target Start/End: Original strand, 53403908 - 53404013
Alignment:
Q  44 tacagtaaatttgaaaggaaataccgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagtttt 143  Q
    |||||||||| |||| ||  | ||||||||| ||||| || || ||||||||||||||||||||| |||||  || |||||||||||||||||| |||||    
T  53403908 tacagtaaatctgaatggggacaccgtaaagaaaaattcagaatttggtaactcatgaccataaacatttttcggtggctaatttggttcgttatgtttt 53404007  T
Q  144 ctgatt 149  Q
    ||||||    
T  53404008 ctgatt 53404013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 82 - 158
Target Start/End: Complemental strand, 28911846 - 28911770
Alignment:
Q  82 caaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgtt-aagttttctgattaaatttggt 158  Q
    |||||||||||||||||||  |||||||||||||| ||||||||||||||||||| || |||| ||||||||||||||    
T  28911846 caaaacttggtaactcatgttcataaatattttat-ggggctaatttggttcgttaaatttttttgattaaatttggt 28911770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 78 - 162
Target Start/End: Complemental strand, 51677369 - 51677286
Alignment:
Q  78 aatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagttttctgattaaatttggttcat 162  Q
    |||||||||||||||||||||||| |||||||||||  | || |||||||||| ||||| | |||| ||||||||||||||||||    
T  51677369 aatccaaaacttggtaactcatgatcataaatatttcct-ggagctaatttggatcgttgaattttttgattaaatttggttcat 51677286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 247 - 298
Target Start/End: Complemental strand, 26457214 - 26457163
Alignment:
Q  247 tttattggagaattgattctagctaactcaaaagctaggaattgtagcttca 298  Q
    |||||||||||||||||||||| |||| |||||||||| |||||||||||||    
T  26457214 tttattggagaattgattctagttaacccaaaagctagaaattgtagcttca 26457163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 255 - 354
Target Start/End: Original strand, 24038094 - 24038193
Alignment:
Q  255 agaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctaaaccaaacatgtt 354  Q
    ||||||||||||||  || | | ||||||||||||||||||||| | ||||||||||||||||   | ||   ||||||| |||| ||||||||||||||    
T  24038094 agaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaacatgtt 24038193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 255 - 354
Target Start/End: Complemental strand, 24246713 - 24246614
Alignment:
Q  255 agaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctaaaccaaacatgtt 354  Q
    ||||||||||||||  || | | ||||||||||||||||||||| | ||||||||||||||||   | ||   ||||||| |||| ||||||||||||||    
T  24246713 agaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaacatgtt 24246614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 255 - 354
Target Start/End: Original strand, 31431068 - 31431167
Alignment:
Q  255 agaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctaaaccaaacatgtt 354  Q
    ||||||||||||||  || | | ||||||||||||||||||||| | ||||||||||||||||   | ||   ||||||| |||| ||||||||||||||    
T  31431068 agaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaacatgtt 31431167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 255 - 354
Target Start/End: Original strand, 39382990 - 39383089
Alignment:
Q  255 agaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctaaaccaaacatgtt 354  Q
    ||||||||||||||  || | | ||| ||||||||||||||||| | ||||||||||||||||   | ||   ||||||| |||| ||||||||||||||    
T  39382990 agaattgattctaggaaagtaagaagttaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaacatgtt 39383089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 298
Target Start/End: Complemental strand, 51677205 - 51677154
Alignment:
Q  247 tttattggagaattgattctagctaactcaaaagctaggaattgtagcttca 298  Q
    |||| |||| ||||||||||||  |||||||||| |||||||||||||||||    
T  51677205 tttaatggaaaattgattctagtaaactcaaaagttaggaattgtagcttca 51677154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 255 - 317
Target Start/End: Complemental strand, 18140547 - 18140485
Alignment:
Q  255 agaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggag 317  Q
    ||||||||||||||  || | | ||||||||||||||||||||| | | ||||||||||||||    
T  18140547 agaattgattctaggaaagtaagaagctaggaattgtagcttcaactaaaattgcttttggag 18140485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 255 - 317
Target Start/End: Complemental strand, 49127760 - 49127698
Alignment:
Q  255 agaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggag 317  Q
    ||||||||||||||  || | | ||||||||||||||||||||| | | ||||||||||||||    
T  49127760 agaattgattctaggaaagtaagaagctaggaattgtagcttcaactaaaattgcttttggag 49127698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 362
Target Start/End: Complemental strand, 51677150 - 51677112
Alignment:
Q  324 attgattttgagaagctaaaccaaacatgttggaattgc 362  Q
    ||||||||||||||||| |||||||||||||| ||||||    
T  51677150 attgattttgagaagctgaaccaaacatgttgaaattgc 51677112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 257 - 317
Target Start/End: Original strand, 53404116 - 53404176
Alignment:
Q  257 aattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggag 317  Q
    ||||||||||||  ||  |||||||||||||||||||||| |   ||||||||||||||||    
T  53404116 aattgattctaggaaaaccaaaagctaggaattgtagctttaaggagaattgcttttggag 53404176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 156; Significance: 1e-82; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 247 - 426
Target Start/End: Complemental strand, 44002750 - 44002571
Alignment:
Q  247 tttattggagaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctaaacca 346  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  44002750 tttattggagaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttagagatgagaattgattttgagaagctgaacca 44002651  T
Q  347 aacatgttggaattgcaagttttcacttttaaagctaccataagtgcttttaagaggtatagaagctgaaccaaacacac 426  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| | |||||||||||||||||||||    
T  44002650 aacatgttggaattgcaagttttcacttttgaagctaccagaagtgcttttaagagttgtagaagctgaaccaaacacac 44002571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 247 - 423
Target Start/End: Complemental strand, 37551661 - 37551484
Alignment:
Q  247 tttattggagaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgag-aagctaaacc 345  Q
    |||||||||||||||||||||| ||||||| || |||||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||| ||||||    
T  37551661 tttattggagaattgattctagttaactcagaaactaggaattgtagcttcaaccagaattgcttttggatatgagaattgattttgagaaagttaaacc 37551562  T
Q  346 aaacatgttggaattgcaagttttcacttttaaagctaccataagtgcttttaagaggtatagaagctgaaccaaaca 423  Q
    |||||| |||||||| | ||||||||||||| ||||||||| ||||||| ||||  ||| || ||| |||||||||||    
T  37551561 aaacatattggaattactagttttcacttttgaagctaccagaagtgctcttaaagggtgtataagttgaaccaaaca 37551484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 44 - 162
Target Start/End: Complemental strand, 44002953 - 44002835
Alignment:
Q  44 tacagtaaatttgaaaggaaataccgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagtttt 143  Q
    |||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  44002953 tacagtaaatttgaaatgaaacaccgtaaaggacaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggtttgttatgtttt 44002854  T
Q  144 ctgattaaatttggttcat 162  Q
    |||||||||||||||||||    
T  44002853 ctgattaaatttggttcat 44002835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 247 - 376
Target Start/End: Complemental strand, 19860356 - 19860227
Alignment:
Q  247 tttattggagaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctaaacca 346  Q
    |||||||||||||||||| ||| ||||||||||| || |||||||| ||||| | | |||||||||| |||||||||||||||||||||||| |||||||    
T  19860356 tttattggagaattgattatagttaactcaaaagttaagaattgtaacttcacctaaaattgcttttagagatgagaattgattttgagaagttaaacca 19860257  T
Q  347 aacatgttggaattgcaagttttcactttt 376  Q
    ||||||||||||| |  |||||||||||||    
T  19860256 aacatgttggaatcgttagttttcactttt 19860227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 44 - 138
Target Start/End: Complemental strand, 19860548 - 19860454
Alignment:
Q  44 tacagtaaatttgaaaggaaataccgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaa 138  Q
    |||||||||| |||| |||||  ||||||||||||||||||||||||||||||||| |||||||||||||| |||  ||||||||||||||||||    
T  19860548 tacagtaaatctgaacggaaacgccgtaaaggaaaatccaaaacttggtaactcataaccataaatattttctggaagctaatttggttcgttaa 19860454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 44 - 162
Target Start/End: Original strand, 43342068 - 43342186
Alignment:
Q  44 tacagtaaatttgaaaggaaataccgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagtttt 143  Q
    ||||||||||||||| ||  | || |||||| ||||| ||||| ||||||| |||||||||||||||||||   ||||||||||||||| ||||||||||    
T  43342068 tacagtaaatttgaatggggacactgtaaagaaaaattcaaaatttggtaagtcatgaccataaatatttttcaggggctaatttggtttgttaagtttt 43342167  T
Q  144 ctgattaaatttggttcat 162  Q
    || ||||||||||||||||    
T  43342168 ctaattaaatttggttcat 43342186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 66 - 162
Target Start/End: Original strand, 37640575 - 37640671
Alignment:
Q  66 accgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagttttctgattaaatttggttcat 162  Q
    ||||||||||||||| ||||| ||| ||||||||||||||||| |||||   |||| ||||||||||||||||||||||||||||||||| ||||||    
T  37640575 accgtaaaggaaaattcaaaatttgttaactcatgaccataaacatttttcaggggttaatttggttcgttaagttttctgattaaattttgttcat 37640671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 247 - 353
Target Start/End: Complemental strand, 43695067 - 43694961
Alignment:
Q  247 tttattggagaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctaaacca 346  Q
    |||| ||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||| ||||  ||| |||||||| |||||  ||||| |||||    
T  43695067 tttaatggagaattgattctagttaactcaaaagttaggaattgtagcttcagccagaattgtttttacagaagagaattgcttttgtaaagctgaacca 43694968  T
Q  347 aacatgt 353  Q
    |||||||    
T  43694967 aacatgt 43694961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 7473802 - 7473706
Alignment:
Q  66 accgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagttttctgattaaatttggttcat 162  Q
    |||||||||||||||  |||| ||||||| ||||||||||||| |||||  |||||||||||||||||  |||||||||||||||||||| ||||||    
T  7473802 accgtaaaggaaaatttaaaatttggtaattcatgaccataaacatttttcgggggctaatttggttcactaagttttctgattaaattttgttcat 7473706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 44 - 162
Target Start/End: Original strand, 32497002 - 32497120
Alignment:
Q  44 tacagtaaatttgaaaggaaataccgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagtttt 143  Q
    |||||||||| |||| ||  | || ||||||||||||| |||| |||  |||| ||||||||||| |||||  |||   |||||||||||||||||||||    
T  32497002 tacagtaaatctgaatggggacactgtaaaggaaaatctaaaatttgacaactgatgaccataaacatttttcgggtaataatttggttcgttaagtttt 32497101  T
Q  144 ctgattaaatttggttcat 162  Q
    ||||||||||||| |||||    
T  32497102 ctgattaaatttgattcat 32497120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 88 - 162
Target Start/End: Complemental strand, 37996979 - 37996905
Alignment:
Q  88 ttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagttttctgattaaatttggttcat 162  Q
    |||||||||||| | |||||| ||||| |||  ||||||||| |||||||||||||| |||||||||||||||||    
T  37996979 ttggtaactcattatcataaacattttttggaagctaatttgattcgttaagttttccgattaaatttggttcat 37996905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 44 - 162
Target Start/End: Original strand, 35457978 - 35458094
Alignment:
Q  44 tacagtaaatttgaaaggaaataccgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagtttt 143  Q
    ||||||||||||||| ||  | |||||||||  |||| ||||| |||||||  |  ||| ||||| |||||  |||||||||||||||||||||||||||    
T  35457978 tacagtaaatttgaatggggacaccgtaaagagaaatgcaaaatttggtaagac--gactataaacatttttcgggggctaatttggttcgttaagtttt 35458075  T
Q  144 ctgattaaatttggttcat 162  Q
    || ||||||| || |||||    
T  35458076 ctaattaaatatgattcat 35458094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 44 - 133
Target Start/End: Complemental strand, 17481094 - 17481005
Alignment:
Q  44 tacagtaaatttgaaaggaaataccgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttc 133  Q
    ||||||||||||||| ||  | | ||||||| |||||  |||| ||||||| |||||| ||||||||||||  |||||||||||||||||    
T  17481094 tacagtaaatttgaatggggacatcgtaaagaaaaatttaaaatttggtaagtcatgatcataaatatttttcgggggctaatttggttc 17481005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 70 - 162
Target Start/End: Original strand, 12015674 - 12015765
Alignment:
Q  70 taaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagttttctgattaaatttggttcat 162  Q
    ||||| |||| | |||| ||||||| ||||||||||||||||||||| | ||||||||| |||||| || |||| | || |||||||||||||    
T  12015674 taaagaaaaacctaaaatttggtaaatcatgaccataaatattttat-gaggctaatttcgttcgtcaaattttttaatcaaatttggttcat 12015765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 255 - 351
Target Start/End: Original strand, 33598118 - 33598214
Alignment:
Q  255 agaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctaaaccaaacat 351  Q
    ||||||||||||| | |||||||||||||||| |  ||||||||   | ||||||||||||| | |||||||| |||||| |||  |||||||||||    
T  33598118 agaattgattctaccaaactcaaaagctaggattcctagcttcaaagaaaattgcttttggacacgagaattgcttttgaaaagtcaaaccaaacat 33598214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 69 - 137
Target Start/End: Complemental strand, 43695243 - 43695176
Alignment:
Q  69 gtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgtta 137  Q
    |||||| |||||||||||||||||||||  ||||| | |||||||| | ||||||||||||||||||||    
T  43695243 gtaaagaaaaatccaaaacttggtaactgttgaccgtgaatatttt-ttggggctaatttggttcgtta 43695176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 255 - 354
Target Start/End: Complemental strand, 14379833 - 14379734
Alignment:
Q  255 agaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctaaaccaaacatgtt 354  Q
    ||||||||||||||  || | | ||||||||||||||||||||| | ||||||||||||||||   | ||   ||||||| |||| ||||||||||||||    
T  14379833 agaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaacatgtt 14379734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 255 - 354
Target Start/End: Original strand, 31686820 - 31686919
Alignment:
Q  255 agaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctaaaccaaacatgtt 354  Q
    ||||||||||||||  || | | ||||||||||||||||||||| | ||||||||||||||||   | ||   ||||||| |||| ||||||||||||||    
T  31686820 agaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaacatgtt 31686919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 255 - 354
Target Start/End: Complemental strand, 31786872 - 31786773
Alignment:
Q  255 agaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctaaaccaaacatgtt 354  Q
    ||||||||||||||  || | | ||||||||||||||||||||| | ||||||||||||||||   | ||   ||||||| |||| ||||||||||||||    
T  31786872 agaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaacatgtt 31786773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 255 - 354
Target Start/End: Complemental strand, 40254517 - 40254418
Alignment:
Q  255 agaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctaaaccaaacatgtt 354  Q
    ||||||||||||||  || | | ||||||||||||||||||||| | ||||||||||||||||   | ||   ||||||| |||| ||||||||||||||    
T  40254517 agaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaacatgtt 40254418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 255 - 354
Target Start/End: Complemental strand, 44282667 - 44282568
Alignment:
Q  255 agaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctaaaccaaacatgtt 354  Q
    ||||||||||||||  || | | ||||||||||||||||||||| | ||||||||||||||||   | ||   ||||||| |||| ||||||||||||||    
T  44282667 agaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaacatgtt 44282568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 257 - 355
Target Start/End: Original strand, 12015933 - 12016031
Alignment:
Q  257 aattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctaaaccaaacatgttg 355  Q
    |||||||||||  ||||||||||  | |||||| |||||||| | | |||||||| | ||||| | |||| ||||||| ||| | ||||||||||||||    
T  12015933 aattgattctaattaactcaaaaatttggaattatagcttcaactaaaattgcttatagagattaaaattaattttgaaaagttgaaccaaacatgttg 12016031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 155; Significance: 4e-82; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 247 - 433
Target Start/End: Complemental strand, 40979522 - 40979337
Alignment:
Q  247 tttattggagaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctaaacca 346  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  40979522 tttattggagaattgattatagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgataagctgaacca 40979423  T
Q  347 aacatgttggaattgcaagttttcacttttaaagctaccataagtgcttttaagaggtatagaagctgaaccaaacacactcttaat 433  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||| |||||||||||||||    
T  40979422 aacatgttggaattgcaagttttcacttttgaagcta-cataagtgcttttaagaggtgtagaagctgaactaaacacactcttaat 40979337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 247 - 431
Target Start/End: Original strand, 19375401 - 19375585
Alignment:
Q  247 tttattggagaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctaaacca 346  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  19375401 tttattagagaattgattctagctaactcaaaagttaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagcttaacca 19375500  T
Q  347 aacatgttggaattgcaagttttcacttttaaagctaccataagtgcttttaagaggtatagaagctgaaccaaacacactctta 431  Q
    |||| ||||||||||||||||||||||||| ||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||    
T  19375501 aacacgttggaattgcaagttttcacttttgaagctaccagaagtgtttttaagaggtgtagaagctgaaccaaacacactctta 19375585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 247 - 417
Target Start/End: Complemental strand, 10900235 - 10900065
Alignment:
Q  247 tttattggagaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctaaacca 346  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  10900235 tttattggagaattgattctagctaactcaaaagttaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctgaacca 10900136  T
Q  347 aacatgttggaattgcaagttttcacttttaaagctaccataagtgcttttaagaggtatagaagctgaac 417  Q
    |||||||||||||||||| ||||||||||| ||| ||||| ||||| ||||||||||| || |||||||||    
T  10900135 aacatgttggaattgcaaattttcacttttgaagttaccagaagtgtttttaagaggtgtaaaagctgaac 10900065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 44 - 162
Target Start/End: Complemental strand, 10900437 - 10900320
Alignment:
Q  44 tacagtaaatttgaaaggaaataccgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagtttt 143  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  10900437 tacagtaaatttgaaaggaaacactgtaaaggaaaatccaaaacttggtaactcatgaccataaatcttttat-ggggctaatttggttcgttaagtttt 10900339  T
Q  144 ctgattaaatttggttcat 162  Q
    |||||||||||||||||||    
T  10900338 ctgattaaatttggttcat 10900320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 44 - 162
Target Start/End: Complemental strand, 40979722 - 40979607
Alignment:
Q  44 tacagtaaatttgaaaggaaataccgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagtttt 143  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| |  ||||||||||||||||||||||| |||||||||| |||| |||||    
T  40979722 tacagtaaatttgaaaggaaacaccgtaaaggaaaatccaaaacttggtaatt--tgaccataaatattttatggggg-taatttggtttgttatgtttt 40979626  T
Q  144 ctgattaaatttggttcat 162  Q
    |||||||||||||||||||    
T  40979625 ctgattaaatttggttcat 40979607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 46 - 162
Target Start/End: Original strand, 11018223 - 11018339
Alignment:
Q  46 cagtaaatttgaaaggaaataccgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagttttct 145  Q
    ||||||||||||| ||  | |||||||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||| |||||||| |    
T  11018223 cagtaaatttgaatggggacaccgtaaaggaaaatccaaaacttggtagctcatgaccataaatattttacaggggctaatttggttcgctaagtttttt 11018322  T
Q  146 gattaaatttggttcat 162  Q
    |||||||||||||||||    
T  11018323 gattaaatttggttcat 11018339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 64 - 162
Target Start/End: Original strand, 8958315 - 8958413
Alignment:
Q  64 ataccgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagttttctgattaaatttggttcat 162  Q
    |||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||| |||||||||| ||||||||| |||||||||||||||||||    
T  8958315 ataccgtaaaggaaaatccaaaacatggtaattcatgaccataaacattttatgggggttaatttggttggttaagtttcctgattaaatttggttcat 8958413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 48 - 162
Target Start/End: Original strand, 41742017 - 41742131
Alignment:
Q  48 gtaaatttgaaaggaaataccgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagttttctga 147  Q
    |||||| |||| ||| | ||||||||| |||||  |||| ||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||| |    
T  41742017 gtaaatctgaatggagacaccgtaaagaaaaatttaaaatttggtaagtcatgaccataaatattttttgggcgctaatttggttcgttaagttttctaa 41742116  T
Q  148 ttaaatttggttcat 162  Q
    |||||||||||||||    
T  41742117 ttaaatttggttcat 41742131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 66 - 162
Target Start/End: Original strand, 41039950 - 41040046
Alignment:
Q  66 accgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagttttctgattaaatttggttcat 162  Q
    ||||||||||||||| ||||| ||||||||||||||||||||| |||||  ||||||||||||| || | |||||||||||||||||||| ||||||    
T  41039950 accgtaaaggaaaattcaaaatttggtaactcatgaccataaacatttttcgggggctaatttgatttgctaagttttctgattaaattttgttcat 41040046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 252 - 315
Target Start/End: Complemental strand, 2526382 - 2526319
Alignment:
Q  252 tggagaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttgg 315  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  2526382 tggagaattgattctagttaactcaaaagctaggaattgtagcttcatccagaattgcttttgg 2526319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 31905716 - 31905619
Alignment:
Q  66 accgtaaaggaaaatccaaaacttggtaactc-atgaccataaatattttatgggggctaatttggttcgttaagttttctgattaaatttggttcat 162  Q
    ||||||||| ||||| ||||| || |||| || ||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||    
T  31905716 accgtaaagaaaaattcaaaattttgtaagtctatgaccataaatattttttgggcgctaatttggttcgttaagttttctaattaaatttggttcat 31905619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 69 - 162
Target Start/End: Original strand, 33387517 - 33387609
Alignment:
Q  69 gtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagttttctgattaaatttggttcat 162  Q
    |||||| |||||||||||||| |||||||||||||||||||||||| | | ||||||||| |||| |||| |||| ||||||||||||||||||    
T  33387517 gtaaagaaaaatccaaaacttagtaactcatgaccataaatattttct-gaggctaatttagttcattaatttttttgattaaatttggttcat 33387609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 2526538 - 2526466
Alignment:
Q  85 aacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagttttctgattaaatttggt 158  Q
    |||||||||||||||| || |||||||||||||||| ||||||||||||||||| |||| ||||||||||||||    
T  2526538 aacttggtaactcatgtccgtaaatattttatgggg-ctaatttggttcgttaaattttttgattaaatttggt 2526466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 247 - 317
Target Start/End: Original strand, 53662 - 53732
Alignment:
Q  247 tttattggagaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggag 317  Q
    ||||||||| |||||||| ||| |||| |||||||||||||||||||||||| ||| ||||||||||||||    
T  53662 tttattggataattgattatagttaacccaaaagctaggaattgtagcttcaaccataattgcttttggag 53732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 431
Target Start/End: Original strand, 25256860 - 25256951
Alignment:
Q  342 aaccaaacatgttggaattgcaagttttcacttttaaagctaccataagtgctttt--aagaggtatagaagctgaaccaaacacactctta 431  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||| || |||||||  | || ||||||||| ||||  ||||| |||||||    
T  25256860 aaccaaacatgttggaattgctagttttcacttttgaagctaccagaattgcttttgaaggatgtatagaagttgaaataaacaaactctta 25256951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 431
Target Start/End: Original strand, 25320651 - 25320742
Alignment:
Q  342 aaccaaacatgttggaattgcaagttttcacttttaaagctaccataagtgctttt--aagaggtatagaagctgaaccaaacacactctta 431  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||| || |||||||  | || ||||||||| ||||  ||||| |||||||    
T  25320651 aaccaaacatgttggaattgctagttttcacttttgaagctaccagaattgcttttgaaggatgtatagaagttgaaataaacaaactctta 25320742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 247 - 327
Target Start/End: Original strand, 33387691 - 33387771
Alignment:
Q  247 tttattggagaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattg 327  Q
    |||| ||||||||||||| | |  |||||||||| ||||||||||||||||| ||||||||| ||||||||| || |||||    
T  33387691 tttaatggagaattgattatggtcaactcaaaagttaggaattgtagcttcaaccagaattgtttttggagaagaaaattg 33387771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 44 - 162
Target Start/End: Original strand, 25256601 - 25256724
Alignment:
Q  44 tacagtaaatttgaaaggaaataccgtaaaggaaaatccaaaacttggtaactcatgaccataaatat-----tttatgggggctaatttggttcgttaa 138  Q
    ||||||||||||| | ||||| | ||||||| ||| ||||||| |||||||||||  |||||||||||     |||   | ||||||||||||||||||     
T  25256601 tacagtaaatttggacggaaaaatcgtaaagaaaattccaaaatttggtaactcacaaccataaatataaatattttctgaggctaatttggttcgttat 25256700  T
Q  139 gttttctgattaaatttggttcat 162  Q
     |||| ||||||||||||||||||    
T  25256701 attttttgattaaatttggttcat 25256724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 44 - 162
Target Start/End: Original strand, 25320392 - 25320515
Alignment:
Q  44 tacagtaaatttgaaaggaaataccgtaaaggaaaatccaaaacttggtaactcatgaccataaatat-----tttatgggggctaatttggttcgttaa 138  Q
    ||||||||||||| | ||||| | ||||||| ||| ||||||| |||||||||||  |||||||||||     |||   | ||||||||||||||||||     
T  25320392 tacagtaaatttggacggaaaaatcgtaaagaaaattccaaaatttggtaactcacaaccataaatataaatattttctgaggctaatttggttcgttat 25320491  T
Q  139 gttttctgattaaatttggttcat 162  Q
     |||| ||||||||||||||||||    
T  25320492 attttttgattaaatttggttcat 25320515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 255 - 353
Target Start/End: Original strand, 29367461 - 29367559
Alignment:
Q  255 agaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctaaaccaaacatgt 353  Q
    ||||||||||||| | |||||||||| ||||| || ||||||||   | ||||||||||||| | |||||||| |||||| |||| ||| |||||||||    
T  29367461 agaattgattctaccaaactcaaaagttaggatttctagcttcaaagaaaattgcttttggacaagagaattgtttttgaaaagccaaaacaaacatgt 29367559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 252 - 330
Target Start/End: Original strand, 33082906 - 33082984
Alignment:
Q  252 tggagaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgatt 330  Q
    ||||||||||||||||| ||||||||||| | ||||| ||||||| | ||||||||  ||||||| | |||||||||||    
T  33082906 tggagaattgattctagttaactcaaaagtttggaatggtagctttaaccagaattaattttggaaaagagaattgatt 33082984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 119 - 162
Target Start/End: Original strand, 53534 - 53577
Alignment:
Q  119 gggctaatttggttcgttaagttttctgattaaatttggttcat 162  Q
    ||||||||||||||||||||||||||| |||||||| |||||||    
T  53534 gggctaatttggttcgttaagttttctaattaaattcggttcat 53577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 255 - 354
Target Start/End: Original strand, 29542474 - 29542573
Alignment:
Q  255 agaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctaaaccaaacatgtt 354  Q
    ||||||||||||||  || | | ||||||||||||||||||||| | ||||||||||||||||   | ||   ||||||| |||| ||||||||||||||    
T  29542474 agaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaacatgtt 29542573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 255 - 317
Target Start/End: Original strand, 3260871 - 3260933
Alignment:
Q  255 agaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggag 317  Q
    ||||||||||||||  || | | ||||||||||||||||||||| | ||||||||||||||||    
T  3260871 agaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggag 3260933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 255 - 317
Target Start/End: Complemental strand, 14082986 - 14082924
Alignment:
Q  255 agaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggag 317  Q
    ||||||||||||||  || | | ||||||||||||||||||||| | ||||||||||||||||    
T  14082986 agaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggag 14082924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 255 - 317
Target Start/End: Complemental strand, 33115129 - 33115067
Alignment:
Q  255 agaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggag 317  Q
    ||||||||||||||  || | | ||||||||||||||||||||| | ||||||||||||||||    
T  33115129 agaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggag 33115067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 255 - 317
Target Start/End: Complemental strand, 42663529 - 42663467
Alignment:
Q  255 agaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggag 317  Q
    ||||||||||||||  || | | ||||||||||||||||||||| | ||||||||||||||||    
T  42663529 agaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggag 42663467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 144; Significance: 1e-75; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 247 - 434
Target Start/End: Original strand, 50392815 - 50393002
Alignment:
Q  247 tttattggagaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctaaacca 346  Q
    |||||| ||||||| ||||||||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| | |||||    
T  50392815 tttattagagaatttattctagctaacttaaaagctaggaattgtagtttcatccagaattacttttggagatgagaattgattttgagaagttgaacca 50392914  T
Q  347 aacatgttggaattgcaagttttcacttttaaagctaccataagtgcttttaagaggtatagaagctgaaccaaacacactcttaatt 434  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||    
T  50392915 aacatgtcggaattgcaagttttcacttttaaagctaccagaagtgcttttaagaggtatagaagttgaatcaaacacactcttaatt 50393002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 247 - 429
Target Start/End: Complemental strand, 30809912 - 30809730
Alignment:
Q  247 tttattggagaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctaaacca 346  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  30809912 tttattggagaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagagttgattttgagaagctgaacca 30809813  T
Q  347 aacatgttggaattgcaagttttcacttttaaagctaccataagtgcttttaagaggtatagaagctgaaccaaacacactct 429  Q
    ||||||||||||||| |||||||||||||| |||||| || |||||||||| |||||| || |||||||||||| ||||||||    
T  30809812 aacatgttggaattggaagttttcacttttgaagctatcagaagtgcttttgagaggtgtaaaagctgaaccaagcacactct 30809730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 44 - 162
Target Start/End: Complemental strand, 30811014 - 30810896
Alignment:
Q  44 tacagtaaatttgaaaggaaataccgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagtttt 143  Q
    |||||||| |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30811014 tacagtaattttgaatggaaacaccgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagtttt 30810915  T
Q  144 ctgattaaatttggttcat 162  Q
    |||||||||||||||||||    
T  30810914 ctgattaaatttggttcat 30810896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 247 - 423
Target Start/End: Original strand, 44610819 - 44610995
Alignment:
Q  247 tttattggagaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctaaacca 346  Q
    |||| ||||||||||||||||   |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||    
T  44610819 tttaatggagaattgattctaataaactcaaaagctagaaattgtagcttcaaccagaattgcttttggagatgagaattgattttgtgaagctgaacca 44610918  T
Q  347 aacatgttggaattgcaagttttcacttttaaagctaccataagtgcttttaagaggtatagaagctgaaccaaaca 423  Q
    |||||||||||||||| ||||||||||||| || |||||| || ||||||| |  | | ||||||||||||||||||    
T  44610919 aacatgttggaattgctagttttcacttttgaaactaccagaattgcttttgaatgatgtagaagctgaaccaaaca 44610995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 44 - 162
Target Start/End: Original strand, 50392614 - 50392730
Alignment:
Q  44 tacagtaaatttgaaaggaaataccgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagtttt 143  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  50392614 tacagtaaatttgaaaggaa-tacggtaaaggaaaatccaaaacttggtaactcat-accataaatattttatgggggctaatttggttcgttaagtttt 50392711  T
Q  144 ctgattaaatttggttcat 162  Q
    |||||||||||||||||||    
T  50392712 ctgattaaatttggttcat 50392730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 247 - 376
Target Start/End: Original strand, 45489106 - 45489235
Alignment:
Q  247 tttattggagaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctaaacca 346  Q
    ||||||||| |||||||||||| |||||| |||| ||||||||||||||||| | |||||||||||| |||||||||||||||||||||||| |||||||    
T  45489106 tttattggaaaattgattctagttaactccaaagttaggaattgtagcttcacctagaattgcttttagagatgagaattgattttgagaagttaaacca 45489205  T
Q  347 aacatgttggaattgcaagttttcactttt 376  Q
    ||||||||||||| |  |||||||||||||    
T  45489206 aacatgttggaatcgttagttttcactttt 45489235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 44 - 162
Target Start/End: Complemental strand, 28182677 - 28182558
Alignment:
Q  44 tacagtaaatttgaaaggaaataccgtaaaggaaaatccaaaactt-ggtaactcatgaccataaatattttatgggggctaatttggttcgttaagttt 142  Q
    |||||||||| |||| ||| ||||||||||||||||| ||||| || || ||||||||||||||||||||||  |||||||||||||||||||||||| |    
T  28182677 tacagtaaatctgaatggagataccgtaaaggaaaattcaaaaatttggcaactcatgaccataaatatttttcgggggctaatttggttcgttaagtct 28182578  T
Q  143 tctgattaaatttggttcat 162  Q
    ||||||||||||||||||||    
T  28182577 tctgattaaatttggttcat 28182558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 44 - 162
Target Start/End: Original strand, 45488900 - 45489018
Alignment:
Q  44 tacagtaaatttgaaaggaaataccgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagtttt 143  Q
    |||||||||| |||| |||||  |||||||| |||||||||||||||||||||||| |||||||||||||| ||| || |||||||||||||||| ||||    
T  45488900 tacagtaaatctgaatggaaacgccgtaaagaaaaatccaaaacttggtaactcataaccataaatattttctggaggttaatttggttcgttaaatttt 45488999  T
Q  144 ctgattaaatttggttcat 162  Q
    ||  |||||||||||||||    
T  45489000 ctagttaaatttggttcat 45489018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 68 - 162
Target Start/End: Complemental strand, 48181352 - 48181257
Alignment:
Q  68 cgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttat-gggggctaatttggttcgttaagttttctgattaaatttggttcat 162  Q
    |||||||||||||| |||| ||||||||||||||||||||| ||||| | |||||||||||||| |||||||||||||||||||||||||||||||    
T  48181352 cgtaaaggaaaatctaaaatttggtaactcatgaccataaacattttttcgggggctaatttggctcgttaagttttctgattaaatttggttcat 48181257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 39251761 - 39251665
Alignment:
Q  66 accgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagttttctgattaaatttggttcat 162  Q
    ||||||||| ||||| ||||| ||||||| ||||||||||||| |||||  ||||||||||||||||||||||||||||| ||||||||||||||||    
T  39251761 accgtaaagaaaaattcaaaatttggtaagtcatgaccataaacatttttcgggggctaatttggttcgttaagttttctaattaaatttggttcat 39251665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 44 - 162
Target Start/End: Complemental strand, 45150904 - 45150786
Alignment:
Q  44 tacagtaaatttgaaaggaaataccgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagtttt 143  Q
    |||||||||| |||| ||  | ||| ||||||||||| ||||| ||||||| ||||||||||||| |||||  ||||||||||||||||| |||||||||    
T  45150904 tacagtaaatctgaatggggacaccataaaggaaaattcaaaatttggtaattcatgaccataaacatttttcgggggctaatttggttcattaagtttt 45150805  T
Q  144 ctgattaaatttggttcat 162  Q
    |||||||||||| ||||||    
T  45150804 ctgattaaattttgttcat 45150786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 252 - 353
Target Start/End: Complemental strand, 44328757 - 44328656
Alignment:
Q  252 tggagaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctaaaccaaacat 351  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||| | | |  ||||| ||||||||||    
T  44328757 tggagaattgattctagttaactcaaaagctaggaattgtagcttcagccaaaattgcttttggagaagagaattgctctagtaaagctgaaccaaacat 44328658  T
Q  352 gt 353  Q
    ||    
T  44328657 gt 44328656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 71 - 162
Target Start/End: Complemental strand, 42274796 - 42274705
Alignment:
Q  71 aaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagttttctgattaaatttggttcat 162  Q
    |||||||||| ||||| ||||||||||||||| ||||| |||||  |||||||||||||||||| ||||||||||||| |||||||||||||    
T  42274796 aaaggaaaattcaaaatttggtaactcatgactataaacatttttcgggggctaatttggttcgataagttttctgatcaaatttggttcat 42274705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 44 - 162
Target Start/End: Complemental strand, 11263997 - 11263879
Alignment:
Q  44 tacagtaaatttgaaaggaaataccgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagtttt 143  Q
    |||||||||| |||| ||  | ||||||||||||||| ||||| ||| ||||||||||||||||| |||||  | ||||||||||||||| |||||||||    
T  11263997 tacagtaaatctgaatggggacaccgtaaaggaaaattcaaaatttgataactcatgaccataaacatttttcgagggctaatttggttcattaagtttt 11263898  T
Q  144 ctgattaaatttggttcat 162  Q
    |||||| ||||| ||||||    
T  11263897 ctgattgaattttgttcat 11263879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 66 - 162
Target Start/End: Original strand, 53687191 - 53687287
Alignment:
Q  66 accgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagttttctgattaaatttggttcat 162  Q
    ||||||||||||||| ||||||||| |||||||||| |||||| ||||| ||| ||||||||||||| |||||||||||| ||| ||||||| ||||    
T  53687191 accgtaaaggaaaattcaaaacttgataactcatgatcataaacattttttggaggctaatttggttggttaagttttcttatttaatttggctcat 53687287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 67 - 162
Target Start/End: Complemental strand, 51230010 - 51229915
Alignment:
Q  67 ccgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagttttctgattaaatttggttcat 162  Q
    |||||||||||||||||||| ||| ||||||||||| |||||  ||||  |||||||||||||||  |||||||||||| |||||||||| |||||    
T  51230010 ccgtaaaggaaaatccaaaatttgataactcatgacgataaacttttttcgggggctaatttggtcggttaagttttcttattaaatttgattcat 51229915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 247 - 353
Target Start/End: Complemental strand, 28883793 - 28883687
Alignment:
Q  247 tttattggagaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctaaacca 346  Q
    |||| ||||||||||||||||  |||||||||||||| ||||||||||||||  |||||||||||||  | | |||||||| |||||  ||||| |||||    
T  28883793 tttaatggagaattgattctatttaactcaaaagctaagaattgtagcttcagtcagaattgcttttacaaaagagaattgtttttgtaaagctgaacca 28883694  T
Q  347 aacatgt 353  Q
    |||||||    
T  28883693 aacatgt 28883687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 68 - 162
Target Start/End: Original strand, 44610644 - 44610735
Alignment:
Q  68 cgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagttttctgattaaatttggttcat 162  Q
    ||||||| ||||| |||||||||||||||||| |||||||||||||||| || ||||||||| |||||| || ||| ||||||||||||||||||    
T  44610644 cgtaaagaaaaattcaaaacttggtaactcat-accataaatattttat-ggagctaatttgattcgtt-agatttttgattaaatttggttcat 44610735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 44 - 162
Target Start/End: Original strand, 48254295 - 48254413
Alignment:
Q  44 tacagtaaatttgaaaggaaataccgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagtttt 143  Q
    ||||||||||||||| ||  | ||||||||| ||||| ||||| ||| ||| ||||||||||||| |||||    ||||||||||  ||| |||||||||    
T  48254295 tacagtaaatttgaatggggacaccgtaaagaaaaattcaaaatttgataagtcatgaccataaacatttttcaagggctaatttaattccttaagtttt 48254394  T
Q  144 ctgattaaatttggttcat 162  Q
    || ||||||||||||||||    
T  48254395 ctaattaaatttggttcat 48254413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 44 - 137
Target Start/End: Complemental strand, 44328957 - 44328866
Alignment:
Q  44 tacagtaaatttgaaaggaaataccgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgtta 137  Q
    |||||||||| |||| ||||| ||||||||  |||||| ||||||||||||||| |||||||||||||||| |  |||||||||||||||||||    
T  44328957 tacagtaaatctgaacggaaaaaccgtaaaa-aaaatctaaaacttggtaactcctgaccataaatatttt-tttgggctaatttggttcgtta 44328866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 47 - 114
Target Start/End: Original strand, 33330088 - 33330154
Alignment:
Q  47 agtaaatttgaaaggaaataccgtaaaggaaaatccaaaacttggtaactcatgaccataaatatttt 114  Q
    ||||||||||||  |||| || |||||| |||||||||||||||||||||||||||||||||||||||    
T  33330088 agtaaatttgaactgaaaaac-gtaaagaaaaatccaaaacttggtaactcatgaccataaatatttt 33330154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 69 - 158
Target Start/End: Complemental strand, 28883970 - 28883882
Alignment:
Q  69 gtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagttttctgattaaatttggt 158  Q
    |||||| |||||| |||||||||||| |  |||||||||||||||| | ||||||||||||||||||||| | || ||||||||| ||||    
T  28883970 gtaaagaaaaatctaaaacttggtaattgttgaccataaatatttt-ttggggctaatttggttcgttaaatattttgattaaatgtggt 28883882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 252 - 316
Target Start/End: Complemental strand, 40237397 - 40237333
Alignment:
Q  252 tggagaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttgga 316  Q
    ||||||||||||||||| ||| | ||||| ||||||||||| ||||||||| |||||||||||||    
T  40237397 tggagaattgattctagttaatttaaaagttaggaattgtaacttcatccaaaattgcttttgga 40237333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 85 - 162
Target Start/End: Complemental strand, 42074653 - 42074580
Alignment:
Q  85 aacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagttttctgattaaatttggttcat 162  Q
    |||||||||||||||||||||||| |||||  ||||||||    | || |||||||||||||||||||||||||||||    
T  42074653 aacttggtaactcatgaccataaacatttttcgggggcta----gcttggttaagttttctgattaaatttggttcat 42074580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 255 - 353
Target Start/End: Complemental strand, 21985461 - 21985363
Alignment:
Q  255 agaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctaaaccaaacatgt 353  Q
    ||||||||||||| | |||||||||| ||||| || ||||||||   | ||||||||||||| | |||||||| |||||| |||| ||| |||||||||    
T  21985461 agaattgattctaccaaactcaaaagttaggatttctagcttcaaagaaaattgcttttggacaagagaattgtttttgaaaagccaaaacaaacatgt 21985363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 247 - 317
Target Start/End: Complemental strand, 51407567 - 51407497
Alignment:
Q  247 tttattggagaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggag 317  Q
    |||||||||||||||||| ||| ||||  |||| |||| ||||||||||||| ||| ||||||||||||||    
T  51407567 tttattggagaattgattttagttaaccaaaaaactagaaattgtagcttcaaccaaaattgcttttggag 51407497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 40237572 - 40237482
Alignment:
Q  44 tacagtaaatttgaaaggaaataccgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgtt 136  Q
    ||||| |||| |||| ||||||||||||||  ||| || |||| ||||||||||||   |||||||||||||| |||||||||||||||||||    
T  40237572 tacagcaaatctgaacggaaataccgtaaaaaaaactc-aaaatttggtaactcatattcataaatattttat-ggggctaatttggttcgtt 40237482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 255 - 354
Target Start/End: Original strand, 51129047 - 51129146
Alignment:
Q  255 agaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctaaaccaaacatgtt 354  Q
    ||||||||||||||  || | | ||||||||||||||||||||| | ||||||||||||||||   | ||   ||||||| |||| ||||||||||||||    
T  51129047 agaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaacatgtt 51129146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 255 - 353
Target Start/End: Complemental strand, 41535909 - 41535811
Alignment:
Q  255 agaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctaaaccaaacatgt 353  Q
    ||||||||||||| | || |||||| |||||| |  ||||||||   ||||||||||||||||| |||||||| |||||| || | ||| |||||||||    
T  41535909 agaattgattctaccaaattcaaaaactaggattcctagcttcaaagagaattgcttttggagaggagaattgcttttgaaaaaccaaaacaaacatgt 41535811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 255 - 348
Target Start/End: Complemental strand, 46797865 - 46797771
Alignment:
Q  255 agaattgattctagctaactcaaaagctaggaattgtagctt-catccagaattgcttttggagatgagaattgattttgagaagctaaaccaaa 348  Q
    |||||| ||||||| ||||||||||  ||| ||||||| ||| || ||| ||||||||||  ||||||  ||||||||||||||| |||||||||    
T  46797865 agaattaattctagttaactcaaaaattagaaattgtaactttcaaccataattgctttttaagatgatgattgattttgagaaggtaaaccaaa 46797771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 255 - 317
Target Start/End: Complemental strand, 47697172 - 47697110
Alignment:
Q  255 agaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggag 317  Q
    ||||||||||||||  || | | ||||||||||||||||||||| | ||||||||||||||||    
T  47697172 agaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggag 47697110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 117 - 162
Target Start/End: Complemental strand, 51407697 - 51407652
Alignment:
Q  117 gggggctaatttggttcgttaagttttctgattaaatttggttcat 162  Q
    ||||||||||||| |||||||| ||||||||||||||| |||||||    
T  51407697 gggggctaatttgtttcgttaaattttctgattaaattcggttcat 51407652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 278 - 354
Target Start/End: Original strand, 47141457 - 47141533
Alignment:
Q  278 aagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctaaaccaaacatgtt 354  Q
    ||||||||||||||||||||| | ||||||||||||||||   | ||   ||||||| |||| ||||||||||||||    
T  47141457 aagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaacatgtt 47141533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 353
Target Start/End: Original strand, 39267554 - 39267657
Alignment:
Q  250 attggagaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctaaaccaaac 349  Q
    |||| ||||||||||||| | |||||||||| ||||| |  ||||||||   | ||||||||||| | | |||||||| |||||| |||| ||| |||||    
T  39267554 attgtagaattgattctaccaaactcaaaagttaggattcctagcttcaaagaaaattgcttttgaacaagagaattgcttttgaaaagccaaaacaaac 39267653  T
Q  350 atgt 353  Q
    ||||    
T  39267654 atgt 39267657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 255 - 317
Target Start/End: Complemental strand, 1527704 - 1527642
Alignment:
Q  255 agaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggag 317  Q
    ||||||||||||||  || | | ||||||||||||||||||||| | ||||||||||| ||||    
T  1527704 agaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgctttcggag 1527642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 255 - 317
Target Start/End: Complemental strand, 42074487 - 42074425
Alignment:
Q  255 agaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggag 317  Q
    ||||||||||| ||| || ||||||||||||||||||||||| |   ||||||| ||||||||    
T  42074487 agaattgattcgagcaaagtcaaaagctaggaattgtagctttaaggagaattgtttttggag 42074425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 255 - 317
Target Start/End: Complemental strand, 52692100 - 52692038
Alignment:
Q  255 agaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggag 317  Q
    ||||||||||||||  || | | ||| ||||||||||||||||| | ||||||||||||||||    
T  52692100 agaattgattctaggaaagtaagaagttaggaattgtagcttcaactagaattgcttttggag 52692038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 66 - 114
Target Start/End: Original strand, 33025622 - 33025670
Alignment:
Q  66 accgtaaaggaaaatccaaaacttggtaactcatgaccataaatatttt 114  Q
    ||||||||| |||||| |||| ||||||||| |||| ||||||||||||    
T  33025622 accgtaaagaaaaatctaaaatttggtaacttatgatcataaatatttt 33025670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 138; Significance: 5e-72; HSPs: 2)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 247 - 428
Target Start/End: Original strand, 9689 - 9870
Alignment:
Q  247 tttattggagaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctaaacca 346  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||    
T  9689 tttattggagaattgattctagctaactcaaaagttaggaattgtagcttcatccagaattgtttttgaagatgagaattgattttgagaagctgaacca 9788  T
Q  347 aacatgttggaattgcaagttttcacttttaaagctaccataagtgcttttaagaggtatagaagctgaaccaaacacactc 428  Q
    ||||||||||||||| |||||||||||||| || |||||| || ||||||| | ||||||||||||||||||||||||||||    
T  9789 aacatgttggaattgtaagttttcacttttgaaactaccagaaatgcttttgaaaggtatagaagctgaaccaaacacactc 9870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 9549 - 9606
Alignment:
Q  44 tacagtaaatttgaaaggaaataccgtaaaggaaaatccaaaacttggtaactcatga 101  Q
    ||||||||| ||||||||||| ||||||||| ||||| ||||||||||||||||||||    
T  9549 tacagtaaacttgaaaggaaacaccgtaaagaaaaattcaaaacttggtaactcatga 9606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 119; Significance: 1e-60; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 247 - 429
Target Start/End: Complemental strand, 41512247 - 41512065
Alignment:
Q  247 tttattggagaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctaaacca 346  Q
    |||||||||||| ||||| ||||||||||||||| ||||||||||||||||||| | || |  ||||||||||||||||||||||||||||||| |||||    
T  41512247 tttattggagaaatgattatagctaactcaaaagttaggaattgtagcttcatcgaaaaatatttttggagatgagaattgattttgagaagctgaacca 41512148  T
Q  347 aacatgttggaattgcaagttttcacttttaaagctaccataagtgcttttaagaggtatagaagctgaaccaaacacactct 429  Q
    || ||||||||||||||||||||||||||| ||||||| | ||||| |||||||| || ||||||||||||||||||||||||    
T  41512147 aagatgttggaattgcaagttttcacttttgaagctacgaaaagtgtttttaagatgtgtagaagctgaaccaaacacactct 41512065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 49 - 162
Target Start/End: Complemental strand, 41512445 - 41512332
Alignment:
Q  49 taaatttgaaaggaaataccgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagttttctgat 148  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  41512445 taaatttgaaaggaaacaccgtaaaggaaaatccaaaacttggtaactcatggccataaatattttatgggggctaatttggttcgttaagttttctgat 41512346  T
Q  149 taaatttggttcat 162  Q
    ||||||||||||||    
T  41512345 taaatttggttcat 41512332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 247 - 429
Target Start/End: Complemental strand, 24075625 - 24075443
Alignment:
Q  247 tttattggagaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctaaacca 346  Q
    |||||||||||||||||||||| ||| ||||||| ||||||||||||||| |||||||||| |||||| |||||||||| |||||| | ||| | |||||    
T  24075625 tttattggagaattgattctagttaaatcaaaagttaggaattgtagctttatccagaattacttttgaagatgagaatcgattttaaaaagttgaacca 24075526  T
Q  347 aacatgttggaattgcaagttttcacttttaaagctaccataagtgcttttaagaggtatagaagctgaaccaaacacactct 429  Q
    ||||||||| ||||||||||||||||||||||| |||||| || | ||||| | || | ||||||||||||||||||||||||    
T  24075525 aacatgttgaaattgcaagttttcacttttaaaactaccagaaatacttttgaaagatgtagaagctgaaccaaacacactct 24075443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 247 - 423
Target Start/End: Original strand, 42137696 - 42137865
Alignment:
Q  247 tttattggagaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctaaacca 346  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| |||||       ||||||||||||||||||||||||||||||| ||||||||    
T  42137696 tttattggagaattgattctagttaactcaaaagctaggaattgtagattcat-------tgcttttggagatgagaattgattttgagaaactaaacca 42137788  T
Q  347 aacatgttggaattgcaagttttcacttttaaagctaccataagtgcttttaagaggtatagaagctgaaccaaaca 423  Q
    || ||||||||||||| | ||||||||||| |||||| |  ||||||||||||  ||| ||||||||||||||||||    
T  42137789 aatatgttggaattgctaattttcacttttgaagctatcgaaagtgcttttaaagggtgtagaagctgaaccaaaca 42137865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 247 - 384
Target Start/End: Original strand, 3850860 - 3850997
Alignment:
Q  247 tttattggagaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctaaacca 346  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||| || |||||| |||||||||||||||||||||||||||||| |||||    
T  3850860 tttattggagaattgattctagataactcaaaagctagaaattgtagcttcattcataattgcctttggagatgagaattgattttgagaagctgaacca 3850959  T
Q  347 aacatgttggaattgcaagttttcacttttaaagctac 384  Q
    |||| |||| ||||||||||||| |||||| |||||||    
T  3850960 aacaggttgaaattgcaagtttttacttttgaagctac 3850997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 47 - 159
Target Start/End: Original strand, 42137496 - 42137608
Alignment:
Q  47 agtaaatttgaaaggaaataccgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagttttctg 146  Q
    |||||||||||| ||||| |||||||||||||||  |||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  42137496 agtaaatttgaatggaaacaccgtaaaggaaaatataaaatttggtaactcatgaccataaatattttatgggggttaagttggttcgttaagttttctg 42137595  T
Q  147 attaaatttggtt 159  Q
    |||||||||||||    
T  42137596 attaaatttggtt 42137608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 44 - 162
Target Start/End: Original strand, 46033469 - 46033587
Alignment:
Q  44 tacagtaaatttgaaaggaaataccgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagtttt 143  Q
    |||||||||| |||| ||||| |||| ||||||||||| ||||||||||||||||||||  |||||||||| ||||||||||||||||| ||| ||||||    
T  46033469 tacagtaaatctgaacggaaacaccgcaaaggaaaatctaaaacttggtaactcatgacagtaaatattttttgggggctaatttggtttgttgagtttt 46033568  T
Q  144 ctgattaaatttggttcat 162  Q
    |||||||||||||||||||    
T  46033569 ctgattaaatttggttcat 46033587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 44 - 162
Target Start/End: Original strand, 47655679 - 47655797
Alignment:
Q  44 tacagtaaatttgaaaggaaataccgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagtttt 143  Q
    ||||||||||||||| ||  ||||||||||| ||||| ||||| ||||||| |||||||||||||||||||  |||||||||||||||||||||||||||    
T  47655679 tacagtaaatttgaatggggataccgtaaagaaaaattcaaaatttggtaagtcatgaccataaatatttttcgggggctaatttggttcgttaagtttt 47655778  T
Q  144 ctgattaaatttggttcat 162  Q
    || ||||||||||||||||    
T  47655779 ctaattaaatttggttcat 47655797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 44740429 - 44740333
Alignment:
Q  66 accgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagttttctgattaaatttggttcat 162  Q
    |||||||| |||||||||||| ||||||||||||||| |||||||||||  || |||||||||||||||||||||||||||||||||||||||||||    
T  44740429 accgtaaaagaaaatccaaaatttggtaactcatgacaataaatatttttcggaggctaatttggttcgttaagttttctgattaaatttggttcat 44740333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 44 - 162
Target Start/End: Original strand, 13509732 - 13509850
Alignment:
Q  44 tacagtaaatttgaaaggaaataccgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagtttt 143  Q
    ||||||||||||||| ||  | ||||||||| ||||| ||||| ||||||| ||||||||||||| |||||  |||||||||||||||||||| ||||||    
T  13509732 tacagtaaatttgaatggggacaccgtaaagaaaaattcaaaatttggtaagtcatgaccataaacatttttcgggggctaatttggttcgttcagtttt 13509831  T
Q  144 ctgattaaatttggttcat 162  Q
     | ||||||||||||||||    
T  13509832 gtaattaaatttggttcat 13509850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 44 - 162
Target Start/End: Complemental strand, 49430938 - 49430820
Alignment:
Q  44 tacagtaaatttgaaaggaaataccgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagtttt 143  Q
    |||||||||| ||||  |||| |||||||||||||||| |||| ||||| |||||||||||||||||||||  | | |||  ||||||||||||||||||    
T  49430938 tacagtaaatatgaacagaaacaccgtaaaggaaaatctaaaatttggtgactcatgaccataaatatttttcgagagctggtttggttcgttaagtttt 49430839  T
Q  144 ctgattaaatttggttcat 162  Q
     ||||||||||||||||||    
T  49430838 ttgattaaatttggttcat 49430820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 254 - 348
Target Start/End: Complemental strand, 1762314 - 1762219
Alignment:
Q  254 gagaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagct-aaaccaaa 348  Q
    |||||||||||||||  |||| ||||| ||||||||||||||||| |||||||||||||||||||| | |||||||||||||||||| ||||||||    
T  1762314 gagaattgattctagtaaacttaaaagttaggaattgtagcttcaaccagaattgcttttggagattaaaattgattttgagaagctgaaaccaaa 1762219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 68 - 162
Target Start/End: Original strand, 4485000 - 4485094
Alignment:
Q  68 cgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagttttctgattaaatttggttcat 162  Q
    |||||| ||||||| |||| ||||||| |||||||||||||||||||  ||||||||||| | ||||||||||||||| ||||||||||||||||    
T  4485000 cgtaaaagaaaatctaaaatttggtaaatcatgaccataaatatttttcgggggctaattagtttcgttaagttttctaattaaatttggttcat 4485094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 47 - 162
Target Start/End: Complemental strand, 45179633 - 45179519
Alignment:
Q  47 agtaaatttgaaaggaaataccgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagttttctg 146  Q
    ||||||| |||| ||||| ||||||||  |||||||||||||||||||| |||||||||||||||||| |  |||||||||||||||||  | |||| ||    
T  45179633 agtaaatatgaacggaaaaaccgtaaataaaaatccaaaacttggtaacccatgaccataaatattttgt-agggctaatttggttcgtagatttttttg 45179535  T
Q  147 attaaatttggttcat 162  Q
    |||||||||| |||||    
T  45179534 attaaatttgattcat 45179519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 44 - 162
Target Start/End: Original strand, 11050892 - 11051010
Alignment:
Q  44 tacagtaaatttgaaaggaaataccgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagtttt 143  Q
    |||| ||||| |||| ||||| |||||||||||||||| |||| |||||||||||| ||||||||||||||  | ||||||||||| | | |||| ||||    
T  11050892 tacactaaatctgaacggaaacaccgtaaaggaaaatctaaaatttggtaactcattaccataaatatttttcgagggctaatttgatccattaattttt 11050991  T
Q  144 ctgattaaatttggttcat 162  Q
     ||| ||||||||||||||    
T  11050992 ttgaataaatttggttcat 11051010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 24075766 - 24075710
Alignment:
Q  106 aaatattttatgggggctaatttggttcgttaagttttctgattaaatttggttcat 162  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  24075766 aaatattttatggaggctaatttggttcgttaagttttctgattaaatttggttcat 24075710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 6706397 - 6706318
Alignment:
Q  83 aaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagttttctgattaaatttggttcat 162  Q
    |||| ||||||| ||||||||||||| |||||  || |||||||||||||||||||||||||| ||||||||||||||||    
T  6706397 aaaatttggtaagtcatgaccataaacatttttcggaggctaatttggttcgttaagttttctaattaaatttggttcat 6706318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 247 - 317
Target Start/End: Complemental strand, 11829180 - 11829110
Alignment:
Q  247 tttattggagaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggag 317  Q
    |||| ||||||||||||||||| ||||||||||| |||||||| || ||||||||||||||||||||||||    
T  11829180 tttaatggagaattgattctagttaactcaaaagttaggaattataccttcatccagaattgcttttggag 11829110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 247 - 313
Target Start/End: Original strand, 31100461 - 31100527
Alignment:
Q  247 tttattggagaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgctttt 313  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||    
T  31100461 tttaatggagaattgattctagttaactcaaaagctaggaattgtagcttcagccagaattactttt 31100527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 50031114 - 50031017
Alignment:
Q  66 accgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggg-gctaatttggttcgttaagttttctgattaaatttggttcat 162  Q
    ||||||||| ||||| ||||| ||||||| ||||||||||||| ||||| | ||  ||||||||||||||||||||||||| |||||||||| |||||    
T  50031114 accgtaaagaaaaattcaaaatttggtaagtcatgaccataaacatttttttggacgctaatttggttcgttaagttttctaattaaatttgattcat 50031017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 247 - 353
Target Start/End: Complemental strand, 27065128 - 27065022
Alignment:
Q  247 tttattggagaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctaaacca 346  Q
    |||| ||||||||||||| ||| |||||||||| ||||||||||||||||||  || ||| ||||||| ||| |||||||| ||||   ||||| |||||    
T  27065128 tttaatggagaattgattttagttaactcaaaaactaggaattgtagcttcagtcaaaatcgcttttgaagaagagaattgcttttataaagctgaacca 27065029  T
Q  347 aacatgt 353  Q
    |||||||    
T  27065028 aacatgt 27065022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 44 - 162
Target Start/End: Complemental strand, 27067440 - 27067323
Alignment:
Q  44 tacagtaaatttgaaaggaaataccgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagtttt 143  Q
    |||||||||| |||| ||||| ||||||||| |||||| |||| |||||||||| ||||||||||||| || |  ||  ||||||| |||||||| ||||    
T  27067440 tacagtaaatctgaacggaaaaaccgtaaagaaaaatctaaaatttggtaactcctgaccataaatatctt-ttaggtttaatttgattcgttaattttt 27067342  T
Q  144 ctgattaaatttggttcat 162  Q
     | ||||||||||||||||    
T  27067341 tttattaaatttggttcat 27067323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 76 - 160
Target Start/End: Complemental strand, 11829347 - 11829264
Alignment:
Q  76 aaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagttttctgattaaatttggttc 160  Q
    |||| ||||||||||||||||||    ||||||||||||||||||  |||||||||||||||| |||| ||||||||||||||||    
T  11829347 aaaacccaaaacttggtaactcagattcataaatattttatggggt-taatttggttcgttaaattttttgattaaatttggttc 11829264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 69 - 162
Target Start/End: Complemental strand, 1762497 - 1762406
Alignment:
Q  69 gtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagttttctgattaaatttggttcat 162  Q
    |||||| ||||||||||| |||||||||||||||| ||||||||||  | || ||||||||||||||||| |||| ||||  ||||||||||||    
T  1762497 gtaaagaaaaatccaaaatttggtaactcatgacc-taaatattttccgagg-ctaatttggttcgttaaattttttgatacaatttggttcat 1762406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 252 - 354
Target Start/End: Original strand, 7593233 - 7593335
Alignment:
Q  252 tggagaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctaaaccaaacat 351  Q
    |||||||||||||||||  || | | ||||||||||||||||||||| | ||||||||||||||||   | ||   ||||||| |||| |||||||||||    
T  7593233 tggagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaacat 7593332  T
Q  352 gtt 354  Q
    |||    
T  7593333 gtt 7593335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 120 - 162
Target Start/End: Complemental strand, 27416794 - 27416752
Alignment:
Q  120 ggctaatttggttcgttaagttttctgattaaatttggttcat 162  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  27416794 ggctaatttggttcgttaaattttctgattaaatttggttcat 27416752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 255 - 354
Target Start/End: Complemental strand, 15353401 - 15353302
Alignment:
Q  255 agaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctaaaccaaacatgtt 354  Q
    ||||||||||||||  || | | ||||||||||||||||||||| | ||||||||||||||||   | ||   ||||||| |||| ||||||||||||||    
T  15353401 agaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaacatgtt 15353302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 255 - 354
Target Start/End: Complemental strand, 26821555 - 26821456
Alignment:
Q  255 agaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctaaaccaaacatgtt 354  Q
    ||||||||||||||  || | | ||||||||||||||||||||| | ||||||||||||||||   | ||   ||||||| |||| ||||||||||||||    
T  26821555 agaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaacatgtt 26821456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 255 - 354
Target Start/End: Original strand, 36496084 - 36496183
Alignment:
Q  255 agaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctaaaccaaacatgtt 354  Q
    ||||||||||||||  || | | ||||||||||||||||||||| | ||||||||||||||||   | ||   ||||||| |||| ||||||||||||||    
T  36496084 agaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaacatgtt 36496183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 255 - 354
Target Start/End: Complemental strand, 38627711 - 38627612
Alignment:
Q  255 agaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctaaaccaaacatgtt 354  Q
    ||||||||||||||  || | | ||||||||||||||||||||| | ||||||||||||||||   | ||   ||||||| |||| ||||||||||||||    
T  38627711 agaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaacatgtt 38627612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 255 - 354
Target Start/End: Complemental strand, 38843324 - 38843225
Alignment:
Q  255 agaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctaaaccaaacatgtt 354  Q
    ||||||||||||||  || | | ||||||||||||||||||||| | ||||||||||||||||   | ||   ||||||| |||| ||||||||||||||    
T  38843324 agaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaacatgtt 38843225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 255 - 354
Target Start/End: Original strand, 50979268 - 50979367
Alignment:
Q  255 agaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctaaaccaaacatgtt 354  Q
    ||||||||||||||  || | | ||||||||||||||||||||| | ||||||||||||||||   | ||   ||||||| |||| ||||||||||||||    
T  50979268 agaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaacatgtt 50979367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 247 - 317
Target Start/End: Original strand, 11051157 - 11051227
Alignment:
Q  247 tttattggagaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggag 317  Q
    |||| ||||||||||||||||| | || |||||| |||||||||||| |||| ||| ||||| ||||||||    
T  11051157 tttaatggagaattgattctagtttacccaaaagttaggaattgtagattcaaccataattgtttttggag 11051227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 255 - 317
Target Start/End: Original strand, 27000299 - 27000361
Alignment:
Q  255 agaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggag 317  Q
    ||||||||||||||  || | | ||||||||||||||||||||| | ||||||||||||||||    
T  27000299 agaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggag 27000361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 255 - 317
Target Start/End: Original strand, 51488528 - 51488590
Alignment:
Q  255 agaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggag 317  Q
    ||||||||||||||  || | | ||||||||||||||||||||| | ||||||||||||||||    
T  51488528 agaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggag 51488590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 124
Target Start/End: Complemental strand, 7385534 - 7385454
Alignment:
Q  44 tacagtaaatttgaaaggaaataccgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggcta 124  Q
    ||||||||||||||| ||  ||||||||||| ||||| ||||| | ||||| ||||||||||| | ||||| | |||||||    
T  7385534 tacagtaaatttgaatggggataccgtaaagaaaaattcaaaattgggtaagtcatgaccatatacatttttttggggcta 7385454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 162
Target Start/End: Original strand, 20473622 - 20473714
Alignment:
Q  70 taaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagttttctgattaaatttggttcat 162  Q
    |||||||||| |||||  ||||||| ||||| ||||||| | ||| | |||||||||||||||| | ||  ||| |||| |||||||||||||    
T  20473622 taaaggaaaacccaaagtttggtaaatcatggccataaacaattttttggggctaatttggttcatcaaaatttttgatcaaatttggttcat 20473714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 162
Target Start/End: Complemental strand, 20557931 - 20557839
Alignment:
Q  70 taaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagttttctgattaaatttggttcat 162  Q
    |||||||||| |||||  ||||||| ||||| ||||||| | ||| | |||||||||||||||| | ||  ||| |||| |||||||||||||    
T  20557931 taaaggaaaacccaaagtttggtaaatcatggccataaacaattttttggggctaatttggttcatcaaaatttttgatcaaatttggttcat 20557839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 255 - 354
Target Start/End: Original strand, 5271536 - 5271635
Alignment:
Q  255 agaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctaaaccaaacatgtt 354  Q
    ||||||||||||||  || | | ||| ||||||||||||||||| | ||||||||||||||||   | ||   ||||||| |||| ||||||||||||||    
T  5271536 agaattgattctaggaaagtaagaagttaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaacatgtt 5271635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 112; Significance: 2e-56; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 249 - 376
Target Start/End: Complemental strand, 2025614 - 2025487
Alignment:
Q  249 tattggagaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctaaaccaaa 348  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  2025614 tattggagaattgattctagctaactcaaaaactaggaattgtagcttcatccaaaattgcttttggagatgagaattgattttgagaagctgaaccaaa 2025515  T
Q  349 catgttggaattgcaagttttcactttt 376  Q
    ||||||| ||||||||||||||||||||    
T  2025514 catgttgaaattgcaagttttcactttt 2025487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 44 - 162
Target Start/End: Complemental strand, 2025819 - 2025701
Alignment:
Q  44 tacagtaaatttgaaaggaaataccgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagtttt 143  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  2025819 tacagtaaatttgaaatgaaacaccgtaaaggaaaatccaaaacttggtaactcatgaccacaaatattttatgggggctaatttagttcgttaagtttt 2025720  T
Q  144 ctgattaaatttggttcat 162  Q
     ||||||||||||||||||    
T  2025719 atgattaaatttggttcat 2025701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 247 - 421
Target Start/End: Complemental strand, 7636545 - 7636372
Alignment:
Q  247 tttattggagaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctaaacca 346  Q
    |||| ||||||||||||| ||  |||||||||| ||||||||| |||||||| | |||||||||||| |||||||||||||||||||| || || || ||    
T  7636545 tttaatggagaattgattttacttaactcaaaatctaggaattatagcttcaacaagaattgcttttagagatgagaattgattttgaaaatctgaatca 7636446  T
Q  347 aacatgttggaattgcaagttttcacttttaaagctaccataagtgcttttaagaggtatagaagctgaaccaaa 421  Q
    |||||||||||||||| ||||||||||||| | ||||| | ||||||||||||  | | ||||||||||||||||    
T  7636445 aacatgttggaattgctagttttcacttttgaggctactaaaagtgcttttaa-cgatgtagaagctgaaccaaa 7636372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 44 - 162
Target Start/End: Original strand, 36821418 - 36821537
Alignment:
Q  44 tacagtaaatttgaaaggaaataccgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaag-ttt 142  Q
    |||||||||| |||| ||| | |||||| ||||||||||||||||||||||||||| ||||| ||||||||  |||||||||||||||||| |||| |||    
T  36821418 tacagtaaatctgaatggagacaccgtagaggaaaatccaaaacttggtaactcataaccattaatatttttcgggggctaatttggttcgctaagtttt 36821517  T
Q  143 tctgattaaatttggttcat 162  Q
    | ||||||||||||||||||    
T  36821518 tttgattaaatttggttcat 36821537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 44 - 162
Target Start/End: Original strand, 22936362 - 22936479
Alignment:
Q  44 tacagtaaatttgaaaggaaataccgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagtttt 143  Q
    ||||||||||||||| ||  | ||||||||| ||||| ||||| ||||||| ||| ||||||||||||||| ||||||||||||||||||||||| ||||    
T  22936362 tacagtaaatttgaatggggacaccgtaaagaaaaattcaaaatttggtaagtcacgaccataaatatttt-tgggggctaatttggttcgttaactttt 22936460  T
Q  144 ctgattaaatttggttcat 162  Q
    || ||||||||||||||||    
T  22936461 ctaattaaatttggttcat 22936479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 66 - 162
Target Start/End: Original strand, 35164195 - 35164291
Alignment:
Q  66 accgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagttttctgattaaatttggttcat 162  Q
    |||||||| |||||||||||| ||||||||||||||||||||| ||||   || ||||||||||||| |||||||||||||||||||||||||||||    
T  35164195 accgtaaaagaaaatccaaaatttggtaactcatgaccataaacatttatcggaggctaatttggttggttaagttttctgattaaatttggttcat 35164291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 247 - 353
Target Start/End: Complemental strand, 3590177 - 3590071
Alignment:
Q  247 tttattggagaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctaaacca 346  Q
    |||| ||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||| ||||||||| |||||||| || ||  ||||| |||||    
T  3590177 tttaatggagaattgattctagttaactcaaaagttaggaattgtagcttcaaccagaattgtttttggagaagagaattgcttctgtaaagctgaacca 3590078  T
Q  347 aacatgt 353  Q
    |||||||    
T  3590077 aacatgt 3590071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 68 - 154
Target Start/End: Original strand, 35802160 - 35802246
Alignment:
Q  68 cgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagttttctgattaaatt 154  Q
    ||||||||||||| ||||| ||||||||||||||||||||| |||||  |||||||||||||||| |||||||||||||||||||||    
T  35802160 cgtaaaggaaaattcaaaatttggtaactcatgaccataaacatttttcgggggctaatttggtttgttaagttttctgattaaatt 35802246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 44 - 162
Target Start/End: Complemental strand, 13015984 - 13015867
Alignment:
Q  44 tacagtaaatttgaaaggaaataccgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagtttt 143  Q
    |||||||||| |||| ||||| ||||||||| ||||| |||||||||||||||| |||||||||||||||| |  | ||||||||| |||||||| ||||    
T  13015984 tacagtaaatgtgaacggaaaaaccgtaaagaaaaattcaaaacttggtaactcttgaccataaatatttt-tttgtgctaatttgattcgttaaatttt 13015886  T
Q  144 ctgattaaatttggttcat 162  Q
     |||||||||||| |||||    
T  13015885 ttgattaaatttgattcat 13015867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 50 - 162
Target Start/End: Complemental strand, 3590368 - 3590259
Alignment:
Q  50 aaatttgaaaggaaataccgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagttttctgatt 149  Q
    ||||||||| ||||| | ||||||| ||||||||||||||||||||||||||||||||||||||| | | ||||||||| ||||||||| |||| | |||    
T  3590368 aaatttgaacggaaa-atcgtaaagaaaaatccaaaacttggtaactcatgaccataaatattttct-gaggctaatttagttcgttaa-tttttttatt 3590272  T
Q  150 aaatttggttcat 162  Q
    |||||||||||||    
T  3590271 aaatttggttcat 3590259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 66 - 162
Target Start/End: Original strand, 45276217 - 45276312
Alignment:
Q  66 accgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagttttctgattaaatttggttcat 162  Q
    ||||||||| ||||| ||||| | ||||| |||||||| |||| ||||| |||| ||||||||||||||||||||||||| ||||||||||||||||    
T  45276217 accgtaaagaaaaattcaaaattcggtaagtcatgacc-taaacattttttgggcgctaatttggttcgttaagttttctaattaaatttggttcat 45276312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 44 - 162
Target Start/End: Complemental strand, 8416970 - 8416851
Alignment:
Q  44 tacagtaaatttgaaaggaaataccgtaaaggaaaa-tccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagttt 142  Q
    ||||||||||||||| ||  | ||||||||  |||| | ||||| ||||||| ||||||||||||| |||||  ||| ||||||||||||||| ||||||    
T  8416970 tacagtaaatttgaatggggacaccgtaaaaaaaaaattcaaaatttggtaagtcatgaccataaacatttttcgggtgctaatttggttcgtgaagttt 8416871  T
Q  143 tctgattaaatttggttcat 162  Q
    ||| ||||| ||||||||||    
T  8416870 tctaattaattttggttcat 8416851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 48 - 114
Target Start/End: Complemental strand, 38023226 - 38023160
Alignment:
Q  48 gtaaatttgaaaggaaataccgtaaaggaaaatccaaaacttggtaactcatgaccataaatatttt 114  Q
    |||||| | |||||||| | |||||| ||||||| |||||||||||||||||||| |||||||||||    
T  38023226 gtaaatctaaaaggaaacatcgtaaaagaaaatcgaaaacttggtaactcatgacaataaatatttt 38023160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 71 - 131
Target Start/End: Complemental strand, 7637507 - 7637448
Alignment:
Q  71 aaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggt 131  Q
    ||||||||||| |||| |||||| |||||||||||||||||||| | ||||||||||||||    
T  7637507 aaaggaaaatctaaaatttggtagctcatgaccataaatatttt-ttggggctaatttggt 7637448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 255 - 354
Target Start/End: Complemental strand, 30210567 - 30210468
Alignment:
Q  255 agaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctaaaccaaacatgtt 354  Q
    ||||||||||||||  || | | ||||||||||||||||||||| | ||||||||||||||||   | ||   ||||||| |||| ||||||||||||||    
T  30210567 agaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaacatgtt 30210468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 255 - 354
Target Start/End: Original strand, 30984334 - 30984433
Alignment:
Q  255 agaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctaaaccaaacatgtt 354  Q
    ||||||||||||||  || | | ||||||||||||||||||||| | ||||||||||||||||   | ||   ||||||| |||| ||||||||||||||    
T  30984334 agaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaacatgtt 30984433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 255 - 317
Target Start/End: Original strand, 34774380 - 34774442
Alignment:
Q  255 agaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggag 317  Q
    ||||||||||||||  || | | ||||||||||||||||||||| | ||||||||||||||||    
T  34774380 agaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggag 34774442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 278 - 354
Target Start/End: Original strand, 629480 - 629556
Alignment:
Q  278 aagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctaaaccaaacatgtt 354  Q
    ||||||||||||||||||||| | ||||||||||||||||   | ||   ||||||| |||| ||||||||||||||    
T  629480 aagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaacatgtt 629556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 108
Target Start/End: Complemental strand, 924331 - 924267
Alignment:
Q  44 tacagtaaatttgaaaggaaataccgtaaaggaaaatccaaaacttggtaactcatgaccataaa 108  Q
    ||||||| || |||| ||||| |||  |||||||||| |||||||| ||||||||||||||||||    
T  924331 tacagtatatctgaacggaaacaccacaaaggaaaattcaaaacttagtaactcatgaccataaa 924267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 118 - 156
Target Start/End: Complemental strand, 33166024 - 33165986
Alignment:
Q  118 ggggctaatttggttcgttaagttttctgattaaatttg 156  Q
    ||||||||||||||||||||| |||| ||||||||||||    
T  33166024 ggggctaatttggttcgttaaattttttgattaaatttg 33165986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 255 - 317
Target Start/End: Original strand, 35164384 - 35164446
Alignment:
Q  255 agaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggag 317  Q
    ||||||||||| ||  || |||||| ||||||||||||||||||   ||||||||||||||||    
T  35164384 agaattgattcgaggaaagtcaaaaactaggaattgtagcttcaaggagaattgcttttggag 35164446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 256 - 317
Target Start/End: Complemental strand, 924195 - 924134
Alignment:
Q  256 gaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggag 317  Q
    ||||||||||||| |||  |||||| ||||||||||||||| | | |||||| |||||||||    
T  924195 gaattgattctagttaaaccaaaagttaggaattgtagctttaactagaattacttttggag 924134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 296
Target Start/End: Complemental strand, 13015774 - 13015733
Alignment:
Q  255 agaattgattctagctaactcaaaagctaggaattgtagctt 296  Q
    |||||||||||| | ||||||||||| |||||||||||||||    
T  13015774 agaattgattctcgttaactcaaaagttaggaattgtagctt 13015733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 82 - 162
Target Start/End: Original strand, 37683968 - 37684047
Alignment:
Q  82 caaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagttttctgattaaatttggttcat 162  Q
    |||| |||||| | |||||| ||| |||||||||| ||| |||||||||||||| || ||||  ||| |||||||||||||    
T  37683968 caaagcttggtgaatcatgatcattaatattttataggg-ctaatttggttcgtcaaatttttagatcaaatttggttcat 37684047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 312 - 376
Target Start/End: Complemental strand, 38023003 - 38022939
Alignment:
Q  312 ttggagatgagaattgattttgagaagctaaaccaaacatgttggaattgcaagttttcactttt 376  Q
    ||||||| ||||||||||||||| ||  |||||||||||||||| ||| |   ||||||||||||    
T  38023003 ttggagaagagaattgattttgaaaaattaaaccaaacatgttgaaatagttggttttcactttt 38022939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 104; Significance: 1e-51; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 247 - 422
Target Start/End: Complemental strand, 19544642 - 19544467
Alignment:
Q  247 tttattggagaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctaaacca 346  Q
    |||| |||||||||||||||||  ||||||||||||| |||||||||||||| ||| |||| |||||||||||||||||||||||||||||||| |||||    
T  19544642 tttaatggagaattgattctagtaaactcaaaagctatgaattgtagcttcaaccataattacttttggagatgagaattgattttgagaagctgaacca 19544543  T
Q  347 aacatgttggaattgcaagttttcacttttaaagctaccataagtgcttttaagaggtatagaagctgaaccaaac 422  Q
    |||||||||||||||| ||||||||||||| ||||||||| || ||||||| |  | | ||||||||||| |||||    
T  19544542 aacatgttggaattgctagttttcacttttgaagctaccagaattgcttttgaaggatgtagaagctgaaacaaac 19544467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 274 - 431
Target Start/End: Original strand, 47158248 - 47158405
Alignment:
Q  274 tcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctaaaccaaacatgttggaattgcaagttttcact 373  Q
    ||||||| || |||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||    
T  47158248 tcaaaagttatgaattgtagcttcacccaaaattgcttttggagatgagaattgattttgagaagttaaaccaaacctgttggaattgctagttttcact 47158347  T
Q  374 tttaaagctaccataagtgcttttaagaggtatagaagctgaaccaaacacactctta 431  Q
    ||| | ||||||| || |||||||||  ||| ||||||||||||||||||||| ||||    
T  47158348 tttgatgctaccaaaaatgcttttaaatggtgtagaagctgaaccaaacacacactta 47158405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 247 - 422
Target Start/End: Original strand, 298655 - 298830
Alignment:
Q  247 tttattggagaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctaaacca 346  Q
    |||| |||||||||||||||||  |||| |||||||| ||||||||||||||  || |||||||||| || ||||||||||||||||||||||| |||||    
T  298655 tttaatggagaattgattctagtaaacttaaaagctaagaattgtagcttcaatcaaaattgcttttagaaatgagaattgattttgagaagctgaacca 298754  T
Q  347 aacatgttggaattgcaagttttcacttttaaagctaccataagtgcttttaagaggtatagaagctgaaccaaac 422  Q
    ||||| ||| |||||| | ||||||||||||||||||||| || ||||||| |  |   |||||||||||||||||    
T  298755 aacatattgaaattgctaattttcacttttaaagctaccagaattgcttttgaaggccgtagaagctgaaccaaac 298830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 252 - 423
Target Start/End: Original strand, 47085689 - 47085860
Alignment:
Q  252 tggagaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctaaaccaaacat 351  Q
    ||||||||| |||||||  |||||||||| ||||||||||| ||||| ||| |||||||||| ||||| ||||||||||||||||||||||| |||||||    
T  47085689 tggagaattaattctagtaaactcaaaagttaggaattgtaacttcaaccaaaattgcttttagagattagaattgattttgagaagctaaatcaaacat 47085788  T
Q  352 gttggaattgcaagttttcacttttaaagctaccataagtgcttttaagaggtatagaagctgaaccaaaca 423  Q
    |||| |||||| | ||||||||||| ||||||||| || ||||||| |  | | ||||||||||| ||||||    
T  47085789 gttgaaattgctaattttcacttttgaagctaccaaaattgcttttgaaggatgtagaagctgaaacaaaca 47085860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 26826656 - 26826560
Alignment:
Q  66 accgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagttttctgattaaatttggttcat 162  Q
    ||||||||||||||| ||||| ||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  26826656 accgtaaaggaaaattcaaaatttggtaactcatgaccataaacatttttcgggggctaatttggttcgttaagttttctgattaaatttggttcat 26826560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 71 - 162
Target Start/End: Original strand, 43664635 - 43664725
Alignment:
Q  71 aaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagttttctgattaaatttggttcat 162  Q
    |||||||||||||||||||| |||||| |||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  43664635 aaaggaaaatccaaaacttgataactcgtgaccataaacatttt-tgggggctaatttggttcgttaaattttctgattaaatttggttcat 43664725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 44 - 162
Target Start/End: Complemental strand, 15000174 - 15000056
Alignment:
Q  44 tacagtaaatttgaaaggaaataccgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagtttt 143  Q
    |||||||||| |||| ||  ||| || |||||||||||||||| ||||||||||||||||||||| |||||   |||||||||| ||||| |||||||||    
T  15000174 tacagtaaatctgaatggggatatcgcaaaggaaaatccaaaatttggtaactcatgaccataaacatttttcaggggctaattaggttctttaagtttt 15000075  T
Q  144 ctgattaaatttggttcat 162  Q
    |||||||||||||||||||    
T  15000074 ctgattaaatttggttcat 15000056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 44 - 159
Target Start/End: Complemental strand, 30825495 - 30825380
Alignment:
Q  44 tacagtaaatttgaaaggaaataccgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagtttt 143  Q
    ||||||||||||||| ||  | |||||||| |||||| ||||| ||||||||||||||||||||| ||||   ||||| |||||||||| ||||||||||    
T  30825495 tacagtaaatttgaatggggacaccgtaaaagaaaattcaaaatttggtaactcatgaccataaacatttatcgggggataatttggttggttaagtttt 30825396  T
Q  144 ctgattaaatttggtt 159  Q
    ||||||||||||||||    
T  30825395 ctgattaaatttggtt 30825380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 44 - 162
Target Start/End: Original strand, 25472556 - 25472674
Alignment:
Q  44 tacagtaaatttgaaaggaaataccgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagtttt 143  Q
    ||||||||||||||| ||  | ||| ||||| ||||| ||||| | ||||| |||| ||||||||||||||  |||||||||||||||||||||||||||    
T  25472556 tacagtaaatttgaatggggacaccctaaagaaaaattcaaaattgggtaagtcattaccataaatatttttcgggggctaatttggttcgttaagtttt 25472655  T
Q  144 ctgattaaatttggttcat 162  Q
    || ||||||||||||||||    
T  25472656 ctaattaaatttggttcat 25472674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 44 - 162
Target Start/End: Original strand, 47158015 - 47158132
Alignment:
Q  44 tacagtaaatttgaaaggaaataccgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagtttt 143  Q
    |||||| ||| |||| ||||| ||| ||||||||||| |||| ||||||||||||||| |||||||||||| | || |||||||||||||||||||||||    
T  47158015 tacagttaatctgaatggaaacaccataaaggaaaattcaaaccttggtaactcatgatcataaatattttct-ggagctaatttggttcgttaagtttt 47158113  T
Q  144 ctgattaaatttggttcat 162  Q
    || ||||||| ||||||||    
T  47158114 ctaattaaatatggttcat 47158132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 247 - 351
Target Start/End: Complemental strand, 32450854 - 32450750
Alignment:
Q  247 tttattggagaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctaaacca 346  Q
    |||||||||||||||||||||| ||||||||||| ||| ||||||||||||| ||| ||||||||||||||| |||||||| |||||  ||| | |||||    
T  32450854 tttattggagaattgattctagttaactcaaaagttagaaattgtagcttcaaccaaaattgcttttggagaagagaattgcttttgtaaagttgaacca 32450755  T
Q  347 aacat 351  Q
    |||||    
T  32450754 aacat 32450750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 44 - 159
Target Start/End: Original strand, 30139620 - 30139735
Alignment:
Q  44 tacagtaaatttgaaaggaaataccgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagtttt 143  Q
    ||||||||||||||| ||  | | ||||||| ||||| ||||| ||||||| |||||||| |||| |||||  |||||||||||||||||||||||||||    
T  30139620 tacagtaaatttgaatggggacatcgtaaagaaaaattcaaaatttggtaagtcatgaccgtaaacatttttcgggggctaatttggttcgttaagtttt 30139719  T
Q  144 ctgattaaatttggtt 159  Q
    || |||||||||||||    
T  30139720 ctaattaaatttggtt 30139735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 44 - 162
Target Start/End: Original strand, 47085480 - 47085597
Alignment:
Q  44 tacagtaaatttgaaaggaaataccgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagtttt 143  Q
    |||||||||| || | ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||| | || |||||||||||  ||| ||||    
T  47085480 tacagtaaatctggacggaaaaatcgtaaagaaaaatccaaaatttggtaactcatgaccataaatattttat-gaggttaatttggttccataaatttt 47085578  T
Q  144 ctgattaaatttggttcat 162  Q
     ||||||||||||||||||    
T  47085579 ttgattaaatttggttcat 47085597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 44 - 162
Target Start/End: Original strand, 26827559 - 26827673
Alignment:
Q  44 tacagtaaatttgaaaggaaataccgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagtttt 143  Q
    |||||||||| |||| ||  | ||||||||||||||| ||||| ||||||||||||||||||||| |||||  | ||||||||||||||||||||||||     
T  26827559 tacagtaaatctgaatggggacaccgtaaaggaaaattcaaaatttggtaactcatgaccataaacatttttcgagggctaatttggttcgttaagttt- 26827657  T
Q  144 ctgattaaatttggttcat 162  Q
       ||||||||||||||||    
T  26827658 ---attaaatttggttcat 26827673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 68 - 162
Target Start/End: Original strand, 298476 - 298569
Alignment:
Q  68 cgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagttttctgattaaatttggttcat 162  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||| | || |||||||||| | ||||| |||| ||||||||||||||||||    
T  298476 cgtaaagaaaaatccaaaacttgataactcatgaccataaatattttct-ggagctaatttggattgttaaattttttgattaaatttggttcat 298569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 247 - 317
Target Start/End: Complemental strand, 39857180 - 39857110
Alignment:
Q  247 tttattggagaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggag 317  Q
    |||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||    
T  39857180 tttaatggagaattgattctagttaactcaaaagctatgaattgtagcttcatccagaattacttttggag 39857110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 69 - 162
Target Start/End: Complemental strand, 25970714 - 25970621
Alignment:
Q  69 gtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagttttctgattaaatttggttcat 162  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||| ||  |||||||||| |   ||||||||||| ||||||||||||||||    
T  25970714 gtaaaggaaaatccaaaatttggtaattcatgaccataaatattttttgatggctaatttgatctattaagttttctcattaaatttggttcat 25970621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 71 - 156
Target Start/End: Original strand, 1999990 - 2000073
Alignment:
Q  71 aaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagttttctgattaaatttg 156  Q
    |||| ||||| ||||||||| ||||||||||||||||||||||| |  |||||||||||||||||||| |||| ||||||||||||    
T  1999990 aaagaaaaatacaaaacttgataactcatgaccataaatatttttt--gggctaatttggttcgttaaattttttgattaaatttg 2000073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 247 - 314
Target Start/End: Original strand, 2000163 - 2000230
Alignment:
Q  247 tttattggagaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttg 314  Q
    |||| ||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||| |||||    
T  2000163 tttaatggagaattgattctagttaactcaaaaggtaggaattgtagcttcaaccagaattgtttttg 2000230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 47 - 132
Target Start/End: Complemental strand, 11341731 - 11341647
Alignment:
Q  47 agtaaatttgaaaggaaataccgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggtt 132  Q
    ||||||| |||| ||||| ||||||||||||||  |||| ||| |||| ||||||||||||||||||||| |||||||||||||||    
T  11341731 agtaaatatgaacggaaacaccgtaaaggaaaacacaaatctttgtaaatcatgaccataaatattttat-ggggctaatttggtt 11341647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 47 - 162
Target Start/End: Original strand, 25191657 - 25191771
Alignment:
Q  47 agtaaatttgaaaggaaataccgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagttttctg 146  Q
    |||||||||||| ||||| ||||||||| ||||| ||| | |||| ||||| ||| |||||||||||| | |||| |||||||||||||||| | || ||    
T  25191657 agtaaatttgaatggaaaaaccgtaaagaaaaattcaatatttggcaactcttgatcataaatatttt-ttggggttaatttggttcgttaaatcttttg 25191755  T
Q  147 attaaatttggttcat 162  Q
    || || ||||||||||    
T  25191756 atcaactttggttcat 25191771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 44 - 162
Target Start/End: Original strand, 26169763 - 26169880
Alignment:
Q  44 tacagtaaatttgaaaggaaataccgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagtttt 143  Q
    |||||||||| |||| ||| | ||||||||| ||| ||||||| ||||||||||||||| ||||||||||| |  ||  |||||||  | ||||| ||||    
T  26169763 tacagtaaatctgaacggagaaaccgtaaagaaaattccaaaatttggtaactcatgacgataaatattttgt-aggattaatttgaattgttaaatttt 26169861  T
Q  144 ctgattaaatttggttcat 162  Q
     ||||||||||||||||||    
T  26169862 ttgattaaatttggttcat 26169880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 252 - 338
Target Start/End: Complemental strand, 40233531 - 40233445
Alignment:
Q  252 tggagaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaag 338  Q
    |||||||||||||| |   |||||||||| || ||||| || ||||| ||| ||||||||||| ||||||||||| |||||||||||    
T  40233531 tggagaattgattccaataaactcaaaagttaagaattataacttcaaccaaaattgcttttgaagatgagaattaattttgagaag 40233445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 60 - 133
Target Start/End: Complemental strand, 39857325 - 39857253
Alignment:
Q  60 ggaaataccgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttc 133  Q
    |||||||| |||||  ||||||||||||||| |||||||||  |||||||||||||| | ||||||||||||||    
T  39857325 ggaaatacagtaaaaaaaaatccaaaacttgataactcatgttcataaatattttat-gtggctaatttggttc 39857253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 255 - 354
Target Start/End: Original strand, 25341477 - 25341576
Alignment:
Q  255 agaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctaaaccaaacatgtt 354  Q
    ||||||||||||||  || | | ||||||||||||||||||||| | ||||||||||||||||   | ||   ||||||| |||| ||||||||||||||    
T  25341477 agaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaacatgtt 25341576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 255 - 354
Target Start/End: Original strand, 31012435 - 31012534
Alignment:
Q  255 agaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctaaaccaaacatgtt 354  Q
    ||||||||||||||  || | | ||||||||||||||||||||| | ||||||||||||||||   | ||   ||||||| |||| ||||||||||||||    
T  31012435 agaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaacatgtt 31012534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 47 - 162
Target Start/End: Complemental strand, 32451052 - 32450939
Alignment:
Q  47 agtaaatttgaaaggaaataccgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagttttctg 146  Q
    ||||||| |||| ||||| |||||| || ||||||||||| ||| ||||   ||| |||||||| ||| | |||| |||||||||||||||| |||| |     
T  32451052 agtaaatctgaatggaaaaaccgtagagaaaaatccaaaatttgataacatttgaacataaataattt-ttggggataatttggttcgttaaatttt-tt 32450955  T
Q  147 attaaatttggttcat 162  Q
    ||||||||||||||||    
T  32450954 attaaatttggttcat 32450939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 353
Target Start/End: Complemental strand, 4035558 - 4035455
Alignment:
Q  250 attggagaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctaaaccaaac 349  Q
    |||| ||||||||||||| | |||||||||| ||||| |  ||||||||   | ||||||||||||| | |||||||| |||| | |||| ||| |||||    
T  4035558 attgtagaattgattctaccaaactcaaaagttaggattcctagcttcaaagaaaattgcttttggacaagagaattgcttttaaaaagccaaaacaaac 4035459  T
Q  350 atgt 353  Q
    ||||    
T  4035458 atgt 4035455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 318
Target Start/End: Complemental strand, 45202574 - 45202503
Alignment:
Q  247 tttattggagaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggaga 318  Q
    |||||||||||||||||||||| ||||  ||||||||  |||||| | |||| ||| ||||| |||||||||    
T  45202574 tttattggagaattgattctagttaacctaaaagctaaaaattgtggtttcaaccaaaattgtttttggaga 45202503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 255 - 317
Target Start/End: Complemental strand, 41064704 - 41064642
Alignment:
Q  255 agaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggag 317  Q
    ||||||||||||||  || ||| ||||||||||||||||||| ||  ||||||| ||||||||    
T  41064704 agaattgattctagaaaagtcagaagctaggaattgtagctttatggagaattgtttttggag 41064642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 117 - 154
Target Start/End: Complemental strand, 45202703 - 45202666
Alignment:
Q  117 gggggctaatttggttcgttaagttttctgattaaatt 154  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  45202703 gggggctaatttggttctttaagttttctgatttaatt 45202666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 257 - 353
Target Start/End: Original strand, 39958428 - 39958524
Alignment:
Q  257 aattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctaaaccaaacatgt 353  Q
    ||||||||||| | |||||||||||||||| |  ||||||||   | ||||||||||| | | |||| ||| |||||| |||  |||||||||||||    
T  39958428 aattgattctaccaaactcaaaagctaggattcctagcttcaaagaaaattgcttttgaacaggagagttgcttttgaaaagtcaaaccaaacatgt 39958524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 255 - 307
Target Start/End: Original strand, 47238972 - 47239024
Alignment:
Q  255 agaattgattctagctaactcaaaagctaggaattgtagcttcatccagaatt 307  Q
    ||||||||||||| |||||||||||| ||||||  ||||||||| ||| ||||    
T  47238972 agaattgattctaactaactcaaaagttaggaacggtagcttcaaccataatt 47239024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 100; Significance: 3e-49; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 247 - 422
Target Start/End: Original strand, 20838490 - 20838665
Alignment:
Q  247 tttattggagaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctaaacca 346  Q
    |||||||||||||||||| |||  |||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  20838490 tttattggagaattgattatagtaaactcaaaagttaggatttgtagcttcaaccagaattgcttttggagatgagaattgattttgagaagctgaacca 20838589  T
Q  347 aacatgttggaattgcaagttttcacttttaaagctaccataagtgcttttaagaggtatagaagctgaaccaaac 422  Q
    |||||||||||||||| ||||||||||||| ||| ||  | || |||||||||  ||| || ||||| ||||||||    
T  20838590 aacatgttggaattgctagttttcacttttgaagttatgagaattgcttttaaagggtgtaaaagcttaaccaaac 20838665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 247 - 353
Target Start/End: Complemental strand, 30134250 - 30134144
Alignment:
Q  247 tttattggagaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctaaacca 346  Q
    |||| ||||||||||||||| | ||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||| |||||  ||||| |||||    
T  30134250 tttaatggagaattgattctggttaactcaaaagctagaaattgtagcttcaaccagaattgcttttggagaagagaattgcttttgtaaagctgaacca 30134151  T
Q  347 aacatgt 353  Q
    |||||||    
T  30134150 aacatgt 30134144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 44 - 162
Target Start/End: Complemental strand, 27825305 - 27825187
Alignment:
Q  44 tacagtaaatttgaaaggaaataccgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagtttt 143  Q
    |||||||||| |||| ||||| ||||||||| |||||| ||||||||||||||| |||||||||||||||| | | ||||||||||||||||||| ||||    
T  27825305 tacagtaaatctgaacggaaaaaccgtaaagaaaaatctaaaacttggtaactcctgaccataaatatttt-ttgtggctaatttggttcgttaaatttt 27825207  T
Q  144 ct-gattaaatttggttcat 162  Q
     | |||||||||||||||||    
T  27825206 ttggattaaatttggttcat 27825187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 252 - 315
Target Start/End: Complemental strand, 4146910 - 4146847
Alignment:
Q  252 tggagaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttgg 315  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  4146910 tggagaattgattctagttaactcaaaagctaggaattgtagcttcatccagaattgcttttgg 4146847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 4147064 - 4146992
Alignment:
Q  85 aacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagttttctgattaaatttggt 158  Q
    |||||||||||||||| || |||||||||||||||| ||||||||||||||||| |||| ||||||||||||||    
T  4147064 aacttggtaactcatgtccgtaaatattttatgggg-ctaatttggttcgttaaattttttgattaaatttggt 4146992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 255 - 332
Target Start/End: Complemental strand, 27825119 - 27825042
Alignment:
Q  255 agaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgatttt 332  Q
    |||||||||||||| ||||| ||||| ||||||||||||||||| ||| ||||||||||||||| |||||||| ||||    
T  27825119 agaattgattctagttaactgaaaagttaggaattgtagcttcaaccataattgcttttggagaagagaattgctttt 27825042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 102 - 162
Target Start/End: Original strand, 20838345 - 20838405
Alignment:
Q  102 ccataaatattttatgggggctaatttggttcgttaagttttctgattaaatttggttcat 162  Q
    ||||||||||||||||| || |||||| |||||||||||||| ||||||||||||||||||    
T  20838345 ccataaatattttatggaggttaatttagttcgttaagttttttgattaaatttggttcat 20838405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 44 - 162
Target Start/End: Complemental strand, 10683461 - 10683343
Alignment:
Q  44 tacagtaaatttgaaaggaaataccgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagtttt 143  Q
    |||||||||| |||| ||  | ||||||||| |||||  |||| ||||||| |||| |||||||| ||||   ||||| |||||||||| ||||| ||||    
T  10683461 tacagtaaatctgaatggggacaccgtaaagaaaaatttaaaatttggtaagtcattaccataaacatttatcgggggttaatttggtttgttaaatttt 10683362  T
Q  144 ctgattaaatttggttcat 162  Q
    || ||||||||||||||||    
T  10683361 ctaattaaatttggttcat 10683343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 255 - 354
Target Start/End: Complemental strand, 30018946 - 30018847
Alignment:
Q  255 agaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctaaaccaaacatgtt 354  Q
    ||||||||||||||  || | | ||| ||||||||||||||||| | ||||||||||||||||   | ||   ||||||| |||| ||||||||||||||    
T  30018946 agaattgattctaggaaagtaagaagataggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaacatgtt 30018847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 91 - 159
Target Start/End: Complemental strand, 30134401 - 30134334
Alignment:
Q  91 gtaactcatgaccataaatattttatgggggctaatttggttcgttaagttttctgattaaatttggtt 159  Q
    ||||||||| ||||| |||||||| | ||| ||||||||||  ||||| |||| |||||||||||||||    
T  30134401 gtaactcataaccatcaatattttcttggg-ctaatttggtatgttaacttttttgattaaatttggtt 30134334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 69; Significance: 8e-31; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 66 - 162
Target Start/End: Original strand, 32876 - 32972
Alignment:
Q  66 accgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagttttctgattaaatttggttcat 162  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||  ||||||| ||||||||||||| ||||||||||||||||| ||||||    
T  32876 accgtaaaggaaaattcaaaatttggtaactcatgaccataaatatttttcgggggctgatttggttcgttaggttttctgattaaattttgttcat 32972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 257 - 376
Target Start/End: Original strand, 4569 - 4687
Alignment:
Q  257 aattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctaaaccaaacatgttgg 356  Q
    |||||||| ||| |||||||||||||||||||||||||||||  ||||||| ||||||||| | |||||||||||||||||| |||||||||| |||||     
T  4569 aattgattgtagttaactcaaaagctaggaattgtagcttcaatcagaattacttttggagctaagaattgattttgagaagttaaaccaaac-tgttga 4667  T
Q  357 aattgcaagttttcactttt 376  Q
    ||||||  ||||||||||||    
T  4668 aattgcttgttttcactttt 4687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0662 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0662
Description:

Target: scaffold0662; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 257 - 376
Target Start/End: Complemental strand, 3529 - 3411
Alignment:
Q  257 aattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggagatgagaattgattttgagaagctaaaccaaacatgttgg 356  Q
    |||||||| ||| |||||||||||||||||||||||||||||  ||||||| ||||||||| | |||||||||||||||||| |||||||||| |||||     
T  3529 aattgattgtagttaactcaaaagctaggaattgtagcttcaatcagaattacttttggagctaagaattgattttgagaagttaaaccaaac-tgttga 3431  T
Q  357 aattgcaagttttcactttt 376  Q
    ||||||  ||||||||||||    
T  3430 aattgcttgttttcactttt 3411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 64; Significance: 8e-28; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 67 - 162
Target Start/End: Complemental strand, 17094 - 16999
Alignment:
Q  67 ccgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagttttctgattaaatttggttcat 162  Q
    |||||||||||||||||||| ||||||||||||||||||||| | ||| | ||||||||||||||||||||||||| || | ||||||||||||||    
T  17094 ccgtaaaggaaaatccaaaatttggtaactcatgaccataaacactttttcggggctaatttggttcgttaagtttcctaaataaatttggttcat 16999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 67 - 162
Target Start/End: Complemental strand, 91819 - 91724
Alignment:
Q  67 ccgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagttttctgattaaatttggttcat 162  Q
    |||||||||||||||||||| ||||||| ||||||||||||| | ||| | |||||| |||||||||||||| |||||||| ||||||||||||||    
T  91819 ccgtaaaggaaaatccaaaatttggtaattcatgaccataaacactttttcggggctgatttggttcgttaaattttctgaataaatttggttcat 91724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0808 (Bit Score: 59; Significance: 8e-25; HSPs: 1)
Name: scaffold0808
Description:

Target: scaffold0808; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 76 - 162
Target Start/End: Complemental strand, 4362 - 4276
Alignment:
Q  76 aaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagttttctgattaaatttggttcat 162  Q
    ||||| ||||| ||||||| ||||||||||||| |||||  ||||||||||||||||||||||||||||| ||||||||||||||||    
T  4362 aaaattcaaaatttggtaagtcatgaccataaacatttttcgggggctaatttggttcgttaagttttctaattaaatttggttcat 4276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 37980 - 37884
Alignment:
Q  66 accgtaaaggaaaatccaaaacttggtaactcatgaccataaatattttatgggggctaatttggttcgttaagttttctgattaaatttggttcat 162  Q
    ||||||||| ||||| ||||| ||||||| || | |||||||| |||||  || |||||||||||||||||||||||||| ||||||||||||||||    
T  37980 accgtaaagaaaaattcaaaatttggtaagtcgttaccataaacatttttcggaggctaatttggttcgttaagttttctaattaaatttggttcat 37884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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