View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15327_high_1 (Length: 337)
Name: NF15327_high_1
Description: NF15327
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15327_high_1 |
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Alignment Details
Target: chr2 (Bit Score: 301; Significance: 1e-169; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 19 - 327
Target Start/End: Original strand, 39322732 - 39323040
Alignment:
| Q |
19 |
gggggaaaactcaaccaatatgcataattaatggttgttacttctaaaggtctaaaagtacattgatcaggcagtgttataacaaagacataaaataaat |
118 |
Q |
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| T |
39322732 |
gggggaaaactcaaccaatatgcataattaatggttgttacttctaaaggtctaaaagtacattgatcaggcagtgttataacaaagacataaaataaat |
39322831 |
T |
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| Q |
119 |
tgatcatgcctggtagaatatttctacatttatatagaacaatcaactaaactggttggtacctaataatgtcctactaccctcatacaaaaatcaggaa |
218 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| |
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| T |
39322832 |
tgatcatgcctggtagaatatttctacatttatatagaacaatcaactaaactggtttgtacctaataatgtcctactaccctcatataaaaatcaggaa |
39322931 |
T |
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| Q |
219 |
aaacccattatgatgtcttcaaaactagacaacagacttcaagtaatttctttacaaaatcgacaaacttatacttctaactcctaacatattttatatt |
318 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39322932 |
aaacccattatgatgtcttcaaaactagacaacagacttcaagtaatttctttacaaaatcgacaaacttatacttctaactcctaacatattttatatt |
39323031 |
T |
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| Q |
319 |
aagcctatg |
327 |
Q |
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||||||||| |
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| T |
39323032 |
aagcctatg |
39323040 |
T |
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