View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15327_high_2 (Length: 438)
Name: NF15327_high_2
Description: NF15327
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15327_high_2 |
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Alignment Details
Target: chr2 (Bit Score: 158; Significance: 6e-84; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 29 - 316
Target Start/End: Complemental strand, 16066928 - 16066638
Alignment:
| Q |
29 |
gattgccatacatttttggtcatggccatgtcaattgctat--gaggatttgggttatggcttagtctgaatatgtgctggaaagtgcaatgctttttta |
126 |
Q |
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| T |
16066928 |
gattgccatacatttttggtcatggccatgtcaattgctatatgaggatttgggttatggcttagtctgaatatgtgctggaaagtgcaatgctttttta |
16066829 |
T |
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| Q |
127 |
ccagctaagaannnnnnnnnnnnnnnnnnnnnncaaaaagtttaattgtcatttaaaatggcaatgaatatgtttaatgtcaaatggctaaccatgcatt |
226 |
Q |
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| T |
16066828 |
ccagctaagaattttttgtttttctttatttttcaaaaactttaattgtcatttaaaatggcaatgaatatgtttaatgtcaaatggctaaccatgaatc |
16066729 |
T |
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| Q |
227 |
ctcaagtgtccatggttctccattaataaaaagtgtcaatgg-tctatagtgagtttacaagcataaacttttaacaatttaataaaaata |
316 |
Q |
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| T |
16066728 |
gtcaagtgtccatggttatccttcagaaaaaaatgtcaatggttctatagtgagtttataagcataaacttttaataatttaataaaaata |
16066638 |
T |
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